HG10007580 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007580
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein RALF-like 9
Location	Chr10: 7603104 .. 7603388 (-)
RNA-Seq Expression	HG10007580
Synteny	HG10007580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCATGTCAAAGGGAATCACACTTGTTTTTATCGGGATTCTCTTGGTTAACTTTGACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAACTAACTCCTGCAAATCCATATCAAAGAGGCTGCAGTGCAATCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGATGTTGCATCCACTAGCCCCGCAATGAGCCCTAATGCATAA

mRNA sequence

ATGACCATGTCAAAGGGAATCACACTTGTTTTTATCGGGATTCTCTTGGTTAACTTTGACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAACTAACTCCTGCAAATCCATATCAAAGAGGCTGCAGTGCAATCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGATGTTGCATCCACTAGCCCCGCAATGAGCCCTAATGCATAA

Coding sequence (CDS)

ATGACCATGTCAAAGGGAATCACACTTGTTTTTATCGGGATTCTCTTGGTTAACTTTGACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAACTAACTCCTGCAAATCCATATCAAAGAGGCTGCAGTGCAATCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGATGTTGCATCCACTAGCCCCGCAATGAGCCCTAATGCATAA

Protein sequence

MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDVASTSPAMSPNA

Homology

[Close]

BLAST of HG10007580 vs. NCBI nr
Match: KAE8650705.1 (hypothetical protein Csa_010421 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 4.4e-24
Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANP 60
          M MSK +TLVFIGILLV+FDMI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANP
Sbjct: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61 YQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN 94
          YQRGC+ I+RCR GNDIID     +E  AS SP++SPN
Sbjct: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPN 98

[Close]

BLAST of HG10007580 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 8.3e-23
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPY 60
          M +SKG   +F+GILL    MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNATRFIHYDPLRGDVSPGCSPTHPELCKLHSANPY 60

Query: 61 QRGCSAINRCRGGNDIIDGVE 82
          +RGC++I+RCRGG+DIID  E
Sbjct: 61 KRGCTSIDRCRGGSDIIDDAE 81

[Close]

BLAST of HG10007580 vs. NCBI nr
Match: XP_022136918.1 (uncharacterized protein LOC111008495 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 8.6e-20
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPY 60
          M   KG  LVFIGILLV+F MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN Y
Sbjct: 1  MMTPKGSMLVFIGILLVSFRMIEITNAIQYINYHALKTDVSPGCSPKHPGLCKLHEANSY 60

Query: 61 QRGCSAINRCRGGNDIIDGVEDV 84
          QRGCSAINRCR  +D ID  E +
Sbjct: 61 QRGCSAINRCR-RDDYIDSEEKI 82

[Close]

BLAST of HG10007580 vs. NCBI nr
Match: XP_022961577.1 (protein RALF-like 9 [Cucurbita moschata])

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 3  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQR 62
          MSKG  ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQR
Sbjct: 1  MSKGTMIIFIVVLFVSINMIEITNATHYINYDPLKKNRDLVCSPTHPDLCKTTPANPYQR 60

Query: 63 GCSAINRCRG--GNDIIDGVED 83
          GC+ I+RCRG   +DIID  E+
Sbjct: 61 GCNPIDRCRGAESDDIIDNDEE 82

[Close]

BLAST of HG10007580 vs. NCBI nr
Match: XP_023546462.1 (protein RALF-like 9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15
Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 9  LVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAIN 68
          ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK  PANPYQRGC+ I+
Sbjct: 2  VIFIVVLFVSINMIEITNATHYINYDPLKKNRDLVCSPTHPDLCKKIPANPYQRGCNPID 61

Query: 69 RCRG--GNDIIDGVED 83
          RCRG   +DIID  E+
Sbjct: 62 RCRGAESDDIIDNDEE 77

[Close]

BLAST of HG10007580 vs. ExPASy Swiss-Prot
Match: Q3ECL0 (Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-10
Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPA 60
          M MSK I  V + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCSAINRCRGG 74
          NPYQRGC  INRCRGG
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]

BLAST of HG10007580 vs. ExPASy Swiss-Prot
Match: A8MQM7 (Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-07
Identity = 33/74 (44.59%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPA 60
          M MSK I  V + + L+ F  +  T   AT YI Y  +  GD +  C K HP  CK   A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCSAINRCR 72
          NPY+RGC  I RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]

BLAST of HG10007580 vs. ExPASy Swiss-Prot
Match: A8MQM2 (Protein RALF-like 6 OS=Arabidopsis thaliana OX=3702 GN=RALFL6 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 7  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSA 66
          I + F+ ++++            YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC  
Sbjct: 9  IRIFFVSVMIILSLFSGFGEGQTYINYNGMKGDIIPGCSSKNPKECVKIPAYSYNRGCEI 68

Query: 67 INRCR 72
            RC+
Sbjct: 69 STRCQ 73

[Close]

BLAST of HG10007580 vs. ExPASy Swiss-Prot
Match: A8MQP2 (Protein RALF-like 29 OS=Arabidopsis thaliana OX=3702 GN=RALFL29 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-06
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 3  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPY 62
          M K   + F+ IL+V    I   +A  YI Y PI+ D+  GC  + P     K TPANPY
Sbjct: 1  MIKTKEVTFVTILIVLCVFISTIHAKRYIEY-PIRLDLGKGCDPRFPTAACYKRTPANPY 60

Query: 63 QRGCSAINRCR 72
          +R C+  NRCR
Sbjct: 61 RRPCTTANRCR 70

[Close]

BLAST of HG10007580 vs. ExPASy Swiss-Prot
Match: A8MR00 (Protein RALF-like 36 OS=Arabidopsis thaliana OX=3702 GN=At2g32885 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-06
Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 8  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAI 67
          T+V    L++   ++  T   + IG   ++ D+  GC+      CK+ PANPY+ GC A 
Sbjct: 7  TVVQSFALIIIISIVMSTTEANSIGAPAMREDLPKGCAPGSSAGCKMQPANPYKPGCEAS 66

Query: 68 NRCRGG 74
           RCRGG
Sbjct: 67 QRCRGG 72

[Close]

BLAST of HG10007580 vs. ExPASy TrEMBL
Match: A0A0A0L8B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-24
Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANP 60
          M MSK +TLVFIGILLV+FDMI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANP
Sbjct: 1  MIMSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61 YQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN 94
          YQRGC+ I+RCR GNDIID     +E  AS SP++SPN
Sbjct: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPN 98

[Close]

BLAST of HG10007580 vs. ExPASy TrEMBL
Match: A0A6J1DYH7 (uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025777 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.0e-23
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPY 60
          M +SKG   +F+GILL    MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNATRFIHYDPLRGDVSPGCSPTHPELCKLHSANPY 60

Query: 61 QRGCSAINRCRGGNDIIDGVE 82
          +RGC++I+RCRGG+DIID  E
Sbjct: 61 KRGCTSIDRCRGGSDIIDDAE 81

[Close]

BLAST of HG10007580 vs. ExPASy TrEMBL
Match: A0A6J1C8U5 (uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008495 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.2e-20
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPY 60
          M   KG  LVFIGILLV+F MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN Y
Sbjct: 1  MMTPKGSMLVFIGILLVSFRMIEITNAIQYINYHALKTDVSPGCSPKHPGLCKLHEANSY 60

Query: 61 QRGCSAINRCRGGNDIIDGVEDV 84
          QRGCSAINRCR  +D ID  E +
Sbjct: 61 QRGCSAINRCR-RDDYIDSEEKI 82

[Close]

BLAST of HG10007580 vs. ExPASy TrEMBL
Match: A0A6J1HAJ8 (protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 3  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQR 62
          MSKG  ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQR
Sbjct: 1  MSKGTMIIFIVVLFVSINMIEITNATHYINYDPLKKNRDLVCSPTHPDLCKTTPANPYQR 60

Query: 63 GCSAINRCRG--GNDIIDGVED 83
          GC+ I+RCRG   +DIID  E+
Sbjct: 61 GCNPIDRCRGAESDDIIDNDEE 82

[Close]

BLAST of HG10007580 vs. ExPASy TrEMBL
Match: A0A6J1FQ53 (auxin-induced in root cultures protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447217 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.9e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 1   MTMSKGITLVFIGILLVNFDMIEVTNA-TDYIGYDPIKGDISPGCSKKHPELCKLTPANP 60
           M +S    LV  G L +  DM+ +TNA  + I Y+ I+ D+SPGC+ KHP LC+   ANP
Sbjct: 228 MAISIRNMLVLFGALFICIDMVGITNANANLIDYEAIRADVSPGCNHKHPHLCETHQANP 287

Query: 61  YQRGCSAINRCRGGNDII 78
           Y+RGC+AIN+CRG   ++
Sbjct: 288 YERGCNAINQCRGSKSVV 305

[Close]

BLAST of HG10007580 vs. TAIR 10
Match: AT1G61566.1 (ralf-like 9 )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPA 60
          M MSK I  V + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCSAINRCRGG 74
          NPYQRGC  INRCRGG
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]

BLAST of HG10007580 vs. TAIR 10
Match: AT2G22055.1 (RALF-like 15 )

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 33/74 (44.59%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPA 60
          M MSK I  V + + L+ F  +  T   AT YI Y  +  GD +  C K HP  CK   A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCSAINRCR 72
          NPY+RGC  I RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]

BLAST of HG10007580 vs. TAIR 10
Match: AT1G60625.1 (RALF-like 6 )

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 7  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSA 66
          I + F+ ++++            YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC  
Sbjct: 9  IRIFFVSVMIILSLFSGFGEGQTYINYNGMKGDIIPGCSSKNPKECVKIPAYSYNRGCEI 68

Query: 67 INRCR 72
            RC+
Sbjct: 69 STRCQ 73

[Close]

BLAST of HG10007580 vs. TAIR 10
Match: AT4G11653.1 (RALF-like 29 )

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 3  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPY 62
          M K   + F+ IL+V    I   +A  YI Y PI+ D+  GC  + P     K TPANPY
Sbjct: 1  MIKTKEVTFVTILIVLCVFISTIHAKRYIEY-PIRLDLGKGCDPRFPTAACYKRTPANPY 60

Query: 63 QRGCSAINRCR 72
          +R C+  NRCR
Sbjct: 61 RRPCTTANRCR 70

[Close]

BLAST of HG10007580 vs. TAIR 10
Match: AT2G32885.1 (Rapid alkalinization factor (RALF) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 6.8e-07
Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 8  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAI 67
          T+V    L++   ++  T   + IG   ++ D+  GC+      CK+ PANPY+ GC A 
Sbjct: 7  TVVQSFALIIIISIVMSTTEANSIGAPAMREDLPKGCAPGSSAGCKMQPANPYKPGCEAS 66

Query: 68 NRCRGG 74
           RCRGG
Sbjct: 67 QRCRGG 72

The following BLAST results are available for this feature:

BLAST of HG10007580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650705.1	4.4e-24	63.27	hypothetical protein Csa_010421 [Cucumis sativus]	[more]
XP_022159360.1	8.3e-23	62.96	uncharacterized protein LOC111025777 [Momordica charantia]	[more]
XP_022136918.1	8.6e-20	65.06	uncharacterized protein LOC111008495 [Momordica charantia]	[more]
XP_022961577.1	2.1e-18	58.54	protein RALF-like 9 [Cucurbita moschata]	[more]
XP_023546462.1	2.2e-15	56.58	protein RALF-like 9 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10007580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECL0	2.2e-10	51.32	Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1	[more]
A8MQM7	3.0e-07	44.59	Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1	[more]
A8MQM2	1.1e-06	36.92	Protein RALF-like 6 OS=Arabidopsis thaliana OX=3702 GN=RALFL6 PE=3 SV=1	[more]
A8MQP2	2.5e-06	42.25	Protein RALF-like 29 OS=Arabidopsis thaliana OX=3702 GN=RALFL29 PE=3 SV=1	[more]
A8MR00	9.6e-06	36.36	Protein RALF-like 36 OS=Arabidopsis thaliana OX=3702 GN=At2g32885 PE=3 SV=1	[more]

BLAST of HG10007580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8B1	2.1e-24	63.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1	[more]
A0A6J1DYH7	4.0e-23	62.96	uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1C8U5	4.2e-20	65.06	uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1HAJ8	1.0e-18	58.54	protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1	[more]
A0A6J1FQ53	4.9e-13	47.44	auxin-induced in root cultures protein 12-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of HG10007580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61566.1	1.6e-11	51.32	ralf-like 9	[more]
AT2G22055.1	2.1e-08	44.59	RALF-like 15	[more]
AT1G60625.1	8.0e-08	36.92	RALF-like 6	[more]
AT4G11653.1	1.8e-07	42.25	RALF-like 29	[more]
AT2G32885.1	6.8e-07	36.36	Rapid alkalinization factor (RALF) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 26..72 e-value: 1.9E-10 score: 41.5
None	No IPR available	PANTHER	PTHR34270	PROTEIN RALF-LIKE 15-RELATED	coord: 1..82
None	No IPR available	PANTHER	PTHR34270:SF10	SUBFAMILY NOT NAMED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007580.1	HG10007580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region