HG10007528 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007528
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	phytochromobilin:ferredoxin oxidoreductase, chloroplastic
Location	Chr10: 6499206 .. 6504974 (-)
RNA-Seq Expression	HG10007528
Synteny	HG10007528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGTAATGGGTCTTCTGATTTTGCTTCATTTGAGCTTCTCTAATATATTTTGCTTTGTAATGCTTCAAACAAAGTTTGGCTGTTGTTCTCTCCAGATTGGTATTTGTTTTCTTTGTTAAGTAGTGTCTGTGTAAGAATAGGGATGCTTTTTGTTTTTCTTGCAACTTTTAACTTCCTATCCCCTGTTCTACTGTGAGCTACTGAATGATGAGCTTTTTTTCAGGGCATTTTCAAGTTGTTTTACTGATTCTGTGTGAAGAGGTTTGATGGACTTGTTGTTTTAGAATAATTTTCATTGCTTTATCTTTAATGGACTGGAACTGACTCTCTCTAGCAAAGTATTCTGCGTTTTTAACTTGTCATAAGAATGCTCAGAAATTAATCTTTTGAGTCCTATTATCATTGGTCTGTCAAGTCATGCTAAATCAACTAATATTTGGGCAAAGTGAGATTAGTTCAACGGTAATTGGCATGACTTTCTTCTCTAGAGGTTGAAGCTTTGATTTCCATCTCTGCAATTGTTGTACTAAAAGAAAAAAACTAATATTTGTCCATTAGACTTACCACATCACTAATGATATTAATAACAGAGTCTACCTGGGATGGAATTGAAACTTTTGAAAGTAAATAAACACAACCATCAAACTTAATGGATTGAATTTGTAATTTAACTCTTGGTCCCTTTCTTGTCTATTGTCATTTTACGTAGAATTAATCTTAATTGTTTATTTTCTCTACATTTTATATTTCTTCAAACTTGCACATTTCCTTTTAGGGAGATTGTCGGATTGGTTTCTTGTTCTTATCTTGCTGGATTATAGCAGGTGTTTTTTTTCAACATAGATTCCATGTCTTTTTATGTCAGGATATTGAAGAAATCTAGCGATTCGTCAATCATATCTAAACTATTGCTTAAGATTATAGATTCATTTTTATCTAGAATGCACAGGTTGTCAACACACTAATTACTGAATACCCTAGTTGATATTTTAACTGATTGTATGATTTTATGTCAAGTCAAGTCAATATAATGCAATGTTTCAGGCTTGCATTTACATAAATGGTTGTGTAGTCTGTATCTTGGCTGTTATTGTCAGCATTCTTGATGTATTTCTGGTTGAAGTTTGTAAACCTTATGAATTAAATTTTAAAAAGTATATGAATTCAGACATGAATCATTGTTTCTGCCATCATATCTATATAATTATTCTTATCCTGCAGGAAAAATATAATTCCATGATTTCCTTGGACAAAAAAGTCAAGCTTGAAATGTTATCTTTCCAAGCTCCGAAGATCAGACTACTTCGCAGTTTGAATATTGAAAGTGAAACAATGCAGGTTTTATTTTATATTTCAACCCTCTTAGGAAGAACTTTTTATGCTTTAGTTCATATAATATGATTGGAAAATTAAATATAAGAGAATTTCAGCTGTATTAGGTATAGTGACTTGACAGAGGAGTATTGGAGGATTCTCTGACGATCACTTCTGTCTTTTTTGAGAAGGGAAACAAATTTTATTGACGAATGAAATAAAATGAGTAAACCTCAAAATGGATTACATGAAAACTTTCCAATTGGAAATCAGATACAAAAAACTATATTACAAAAGAAAGAAGTTTTATTAGTTCTCTGGCCCTTTTTACTTGTGGCCTTCTTTATTTTTCCTTGCTGAAATTCACTGCTTCCCCTTAAATTTAAAATTTAAAAATGTTAAAAGAACAACCATCCCTTGAGAAAGTTTTCCTTGGATATCAAAGTATAGAAATTTGCTAGTTATCCCAAGATAGTGTTGTAGTTTGTTGATGGTGAGAGGCTTAGTCTGAAGTCATAGACTTAAAAGTACTTGGTTATGGTTATGGGAATATTGATCCATGCAGCCATTCTTAGTAGAAAATCATTGTAAGAATTAATATCAATGATTTTGACGTTTCTGAATAATTTGGGACAGCTTCCAACAAATTTCTAGACCGCAGTTTGTGTAGCTAGCCCAGACGTAAATCTTATTTTCCTTTTTTGTAACTATTTTCTGCGGGTTAGAAATGCAAACCTTAAACTGCTGAAATTCATTCCTGAACCTGTGTGTGTTCAGTCACCATACTTAGTGTCTATGTTTATATTCTAAGAACTATTTCCATTCATTTATGGTGCAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGTAAGCTTCTTTGATCTTTGGAGCCTGACAATAGTCTTGCATTATTTTTTCAATGTTTATACAAATTTTACATCGTCTACCTTGGAAGCATAGGAAATACTTAATTTGATGTTCTTGATATGAGAACATCAGTGATTCGGTCTAAACATCGGTCTAAAGTTCCATTGGTTGTGCGAATGCCTAGCACACTTTTAACGATAATATCCAACAAGTCAATTTAGTTCAACTCAAAGGATGGAGGTAGATACAGATTACCTCTAGGTCAAAACCTAGAAGAAAAAACCCAAATCTTGTTGGAAGGGGTCATATCTCTTATGGTTTTCCCAATTTCTCTCAGTTTGTTTGTTAGTTTCTGTTCTAGGAAAGGTTCAAAAATTTATTTTTAGGAGGACCATTGGGTGGGAGATAAAGCCTTTTTGTGTTTTATTTCCGCATTTACACTTTCTTTTGAACTAGATTTTGTGTTTAGTGGCCTCGGTGCTGCCTTCCCCGGACCATTCTTCTTTGATTTTATTAGGTTTGTGTCATCCTCAGTTTGATAGAGAGACGATAGATGTGGGGGGTCGTCTTTATATTTGTTGAGACCAGCACATGTTTCCATAAGAAGGTATATTAGGATTTGTACTCCTGATCCTTCTAGGTCTTTCTTTCCTACGTCAACTACTGCAGTTTTCACTTTTTTCCTAATTGTGGAAGGTTAAAATTCCGAAGAAGGTAAAGATTTTTGCATGGCAAGTTTTACATGGGAGGGCTAACACCATAGATCGTATTCAAAGACACTCTTCCTTTGTTTTGTACTAGGGTGCATTCTCTTTAGGAGGACAAGGAGGATCTTAATCATTTAGTGAATGTTTGGGGCAAGGGGTGGAGTTGTGAACTCAATGGAGTTATGAAGTTTGGGGAGTTATGAACTCCCAGGACTTACAGTATAAGGAGTTGATCAGGTATGAAATTGATATTTTTTAGTAGTGGGACCCACAAACTCCTTGGGTCAAACAAGGAGTGGAGTTCACAACTCCACACTTCCAACTTCCTACTCTCCAACTCCTTGACCGAAACACCCCCTTACTGTGGAGTTGCTAGTTTGCAAACTACCTTGCAGTCACTGGTTGAGTTCTTTTAGTGTTTGTGGGGCTCGCAACAGAGATAGGTGGTCTATATTGGAGAAGGTGCTTTTCGATCCTCCCTTTAAGGAGAGGGGCAAAGTTTTGTGGCATGCTAACTTCTTTGCTGTTTTGTGAGATATTTGGCTTGAGAAGAACAGTAGAACTTTTGGAGAGGTTGTGAAATCGAGTGAGGAAGTTTGGGAGGTGACGATGTTTAACGCTTATTTATGGGTATCAGTCACTAGGCCTTTTTGTAATTATAGTCTTGGTCTTGTTCTTTTAGATTGGAGTCCTTTTTTGAGGTTAGGGTTGGACTCTCATTTTTTTGGCATGTTTTTGTACGCCTTTGTATTCTTTCATTGTTCTCAATAAAAGCTTAGTTTCATACACCGCAAAAAAGGTTTGATGGCCAATCAATCTTAAAGCATGTCATCTAATCACAAGAATTGTTGATATTCATTTTTTATCCGCCACCTATATGTGCATAAATGTACAAATCTGCAATTTTTCCGACACTCATTAGGCTTAATAAGTTACATAGACAAGAGAATGTGGGCATCTTGTCTTCTGATTTAGTGAGCTTTCTCCAGTTTTTGTTGGTAGGCACTTGTTAGAAACTTAAGTAAGAGACGAATGGAAATGAAAATGACCAGAACTGATCCCATACGCAACTTTTTTAGCAATCTCAATCACATACCTGAAAAAAGAAAAAAAAAGGTTGATTTGGATTGAAATGAGTTTGCCTTATATGCATCCAGCGAGGGTTTTAACGCATGCATCAAATTGTGCTCCGTACACTTTGTATTCCGAGTGTCCAAATTTTATGTTAAAATATCTTCTCTAACTAGATTACCGGTTAATGTTCTTGTTCTTGCTGGAACCTACACTAAATATAATTTGCAACCATTCGTAACACTAACTCGGTTTTTTTTTTTTTTTTTGTAGGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTGTATGTTTTTTTTCTTAAGATATTAGTTTATATTACTACTACAGGCACTGTAGACTCGTTACTTTTATGACATTTGGTATACAACTTTTTTCCTTGATCTGTTCTAAATTTGATGTGATGATTACTGAAAACAGACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGGAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGTACGATATATTGTTTTCTGCATTCGTGGATTACTACAAGGTAATTGAAATTAACTATGCTGCTGCTATGATAAAGATTCCTATTTTTCCCCCCTTTTTGTGTGATTTCTAGCTCTGTCTTTTGAAGATTTTTAGTTATATGCATGTATTGGATCTTATTTTGATTATGTTACTGAAAGTTCCAATTTACTGCAAGGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGTAATAACATTTGTTTTCATATCATGGATCTCTTCTTCTTTCCTTTTATATTTTTGTTTTACGAAAATTTCCAACTTAGCTCTGGAGATCGGAGAAGCTCTGGTTGTATATGGATGGATATTACCAAAACTTAGCTAGATAATTACCCACAGTTGAACTTTGGTTGTAGTTTGTTCAAATTTGGAGCTGCAAGATCATTTATGAGTCTACTAAATTGCTTTTTTCTCTATACACAACTCCTGAAATAAATTTAATCTAGACTATAAAGTTTCATGAAACTCTCTCTTTTGTTAAAATTTCTGCTGACTTTATTCGATGCAACATTCACAAACAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGTAACATACACGAAATCTGTCAATGTTCTTGCATCGTTTAAAAGTTTCATTCTCTCACTTCACATCTAACCATCAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA

mRNA sequence

ATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGGAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGTACGATATATTGTTTTCTGCATTCGTGGATTACTACAAGTTCCAATTTACTGCAAGGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA

Coding sequence (CDS)

ATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGGAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGTACGATATATTGTTTTCTGCATTCGTGGATTACTACAAGTTCCAATTTACTGCAAGGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGA

Protein sequence

MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRGEFIGDTIKS

Homology

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BLAST of HG10007528 vs. NCBI nr
Match: XP_038880083.1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Benincasa hispida])

HSP 1 Score: 442.2 bits (1136), Expect = 3.5e-120
Identity = 236/333 (70.87%), Postives = 249/333 (74.77%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPS 60
           MGSSSRLSFSLSFN PPFS+NCSSKNKCKRAF+PISSISYQKFVQFALDETKLHTHLFPS
Sbjct: 1   MGSSSRLSFSLSFNSPPFSTNCSSKNKCKRAFLPISSISYQKFVQFALDETKLHTHLFPS 60

Query: 61  PL---------------------------------------QVLDFAAFPEPEFDVPIFC 120
           PL                                       QVLD AAFPEPEFDVPIFC
Sbjct: 61  PLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDLAAFPEPEFDVPIFC 120

Query: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYER 180
           ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAE+LP    L  ++ + 
Sbjct: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAELLPWGGKLTSESLK- 180

Query: 181 VVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMIN 240
               F S   +   F +      I+F          Y KAWLEL++N  EETIPSRL+IN
Sbjct: 181 ----FFSPIVIWSKFSSTESKYDILFS-----AFVDYYKAWLELMDNTGEETIPSRLLIN 240

Query: 241 REAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCE 295
           REAQHRYL WR EKDPGHGLLRKLIGE LAKDLVRNFLFNGIDELGSKRFLDYFPEYCCE
Sbjct: 241 REAQHRYLSWREEKDPGHGLLRKLIGEMLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCE 300

[Close]

BLAST of HG10007528 vs. NCBI nr
Match: XP_023515585.1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.2 bits (1092), Expect = 4.4e-115
Identity = 224/335 (66.87%), Postives = 241/335 (71.94%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPS 60
           MGS S L F LSFN PPFSS+CSSKNKC+RAF P+S+ISYQKFVQFALDETKLHTHLFPS
Sbjct: 1   MGSCSTLPFCLSFNSPPFSSSCSSKNKCRRAFFPVSAISYQKFVQFALDETKLHTHLFPS 60

Query: 61  PL---------------------------------------QVLDFAAFPEPEFDVPIFC 120
           PL                                       QVLDFAAFPE EFDVPIFC
Sbjct: 61  PLQEKYNSMISMDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPETEFDVPIFC 120

Query: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAY 180
           ANIFTAASSSIVVLDLNPLHDVI QRDYREKYYKS+LHLGTKYAE+LP    LT     +
Sbjct: 121 ANIFTAASSSIVVLDLNPLHDVINQRDYREKYYKSILHLGTKYAELLPWGGKLTSESLKF 180

Query: 181 ERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLM 240
              + I+      +  +     + +  F          Y KAWLELVNN  EETIP RLM
Sbjct: 181 FSPIVIWNKSSSTESTY----DILFSAFV--------DYYKAWLELVNNAAEETIPFRLM 240

Query: 241 INREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYC 295
           +NREAQHRYL WRAEKDPGHGLL+KLIGETLAKDLVRNFLFNG+DELGSKRFLDYFPEY 
Sbjct: 241 VNREAQHRYLSWRAEKDPGHGLLKKLIGETLAKDLVRNFLFNGVDELGSKRFLDYFPEYY 300

[Close]

BLAST of HG10007528 vs. NCBI nr
Match: XP_004139053.1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus] >KGN66520.1 hypothetical protein Csa_007206 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 4.9e-114
Identity = 223/330 (67.58%), Postives = 244/330 (73.94%), Query Frame = 0


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL- 63
           SSRL FSLSFN PPFS+NCSSKN+ KRAF PISSISYQKFVQFALDETKLHTHLFPSPL 
Sbjct: 3   SSRLCFSLSFNSPPFSTNCSSKNRSKRAFFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  --------------------------------------QVLDFAAFPEPEFDVPIFCANI 123
                                                 QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKSKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVG 183
           FTAA+SSIVVLDLNPLHDVI+QR YREKYYKSLLHLGTKYAE+LP    L  ++ +    
Sbjct: 123 FTAANSSIVVLDLNPLHDVISQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLK---- 182

Query: 184 IFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREA 243
            F S   +   F +      I+F          Y KAWLEL+NN  EETIP +LM+NREA
Sbjct: 183 -FFSPIVIWSKFSSTESKYDILFS-----AFMDYYKAWLELMNNTGEETIPPQLMVNREA 242

Query: 244 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 295
           QHRYL WRAEKDPGH LLRKLIGETLAKD+VRNFLF+G+DELGSK+FLDYFPEYCCEDGT
Sbjct: 243 QHRYLSWRAEKDPGHHLLRKLIGETLAKDVVRNFLFHGVDELGSKKFLDYFPEYCCEDGT 302

[Close]

BLAST of HG10007528 vs. NCBI nr
Match: XP_022988175.1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 418.7 bits (1075), Expect = 4.2e-113
Identity = 222/335 (66.27%), Postives = 238/335 (71.04%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPS 60
           M S S LSF LSFN  PFSS+CSSKNKC+RAF P+S+ISYQKFVQFALDETKLHTHLFPS
Sbjct: 1   MASCSTLSFCLSFNSTPFSSSCSSKNKCRRAFFPVSAISYQKFVQFALDETKLHTHLFPS 60

Query: 61  PL---------------------------------------QVLDFAAFPEPEFDVPIFC 120
           PL                                       QVLDFAAFPE EFDVPIFC
Sbjct: 61  PLQEKYNSMISMDKNVKLQMLSFQAPKIRLLRSLNIESETMQVLDFAAFPETEFDVPIFC 120

Query: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAY 180
           ANIFTAASSSIVVLDLNPLHDVI QRDYREKYYKSLLHLG KYAE+LP    LT     +
Sbjct: 121 ANIFTAASSSIVVLDLNPLHDVINQRDYREKYYKSLLHLGIKYAELLPWGGKLTSESLKF 180

Query: 181 ERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLM 240
              + I+      +  +     + +  F          Y KAWLELVNN  EETIPSRLM
Sbjct: 181 FSPIVIWTKSSSTESTY----DILFSAFV--------DYYKAWLELVNNAAEETIPSRLM 240

Query: 241 INREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYC 295
           +NREAQHRYL WRAEKDPGHGLL+KLIGE LAKDLVRNFLFNG+DELGSKRFLDYFPEY 
Sbjct: 241 VNREAQHRYLSWRAEKDPGHGLLKKLIGEMLAKDLVRNFLFNGVDELGSKRFLDYFPEYY 300

[Close]

BLAST of HG10007528 vs. NCBI nr
Match: XP_008450371.1 (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 4.2e-113
Identity = 225/330 (68.18%), Postives = 245/330 (74.24%), Query Frame = 0


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL- 63
           SSRLSFSLSFN PPFS+NC+SKN+ KRA  PISSISYQKFVQFALDETKLHTHLFPSPL 
Sbjct: 3   SSRLSFSLSFNSPPFSTNCNSKNRFKRACFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  --------------------------------------QVLDFAAFPEPEFDVPIFCANI 123
                                                 QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKAKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVG 183
           FTAA+SSIVVLDLNPLHDVITQR YREKYYKSLLHLGTKYAE+LP    L  ++ +    
Sbjct: 123 FTAANSSIVVLDLNPLHDVITQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLK---- 182

Query: 184 IFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREA 243
            F S   +   F +  + +Y +     +     Y KAWLEL+NN  EETIPS+LMINREA
Sbjct: 183 -FFSPIVIWSKF-SSTESKYDILSSAFM----DYYKAWLELMNNTVEETIPSQLMINREA 242

Query: 244 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 295
           QHRYL WRAEKDPGH LLRKLIGETLAKD+V+NFLFNGIDELGSK FLDYFPEY CEDGT
Sbjct: 243 QHRYLSWRAEKDPGHHLLRKLIGETLAKDVVQNFLFNGIDELGSKSFLDYFPEYRCEDGT 302

[Close]

BLAST of HG10007528 vs. ExPASy Swiss-Prot
Match: Q9SR43 (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HY2 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-63
Identity = 134/312 (42.95%), Postives = 181/312 (58.01%), Query Frame = 0


Query: 17  PFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL-------------- 76
           P   N + + + KR  + +S++SY++F + AL+ET+    L PS L              
Sbjct: 28  PNKINFTLRRRKKRFLLRVSAVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKT 87

Query: 77  -------------------------QVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDL 136
                                    QV DFA F EPE+D PIFCAN FT+ + +IVVLDL
Sbjct: 88  ELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDL 147

Query: 137 NPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFL 196
           NPLH +  Q DY++KYY  ++ +  KYAE  P     G+   E +   F S   M   F 
Sbjct: 148 NPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWG---GKLTGESIK--FFSPLVMWTRFS 207

Query: 197 NRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDP 256
           +  +    +F     L+   Y +AWLE+   + EE  PS +  N EAQH+YL WRA+KDP
Sbjct: 208 SSKEKHKALF--SAFLE---YYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDP 267

Query: 257 GHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYE 290
           GHGLL++L+GE  AK+L+R+FLFNG+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE
Sbjct: 268 GHGLLKRLVGEAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYE 327

[Close]

BLAST of HG10007528 vs. ExPASy Swiss-Prot
Match: Q93TM8 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=pebB PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11
Identity = 51/180 (28.33%), Postives = 80/180 (44.44%), Query Frame = 0


Query: 62  LQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLG 121
           LQVL+F  FP   +D+P F A++ T     ++ LD+ PL        Y+ KY + +L + 
Sbjct: 79  LQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFR--DDSAYQAKYTEPILPIF 138

Query: 122 TKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKA 181
             + +     L+ G    E     F         FL        V   +       Y KA
Sbjct: 139 HAHQQ----HLSWGGDFPEEAQPFF------SPAFLWTRPQETAVVETQVFAAFKDYLKA 198

Query: 182 WLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFN 241
           +L+ V   E  T    L+  ++AQ RYL +RAEKDP  G+ ++  G    ++ +  FLF+
Sbjct: 199 YLDFVEQAEAVTDSQNLVAIKQAQLRYLRYRAEKDPARGMFKRFYGAEWTEEYIHGFLFD 246

[Close]

BLAST of HG10007528 vs. ExPASy Swiss-Prot
Match: Q10UW6 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=pebB PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.6e-11
Identity = 54/182 (29.67%), Postives = 83/182 (45.60%), Query Frame = 0


Query: 60  SPLQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLH 119
           S LQVL+F  FP   +D+P F A++ +     ++ LD+ PL     Q  Y++KY + +  
Sbjct: 77  SALQVLNFVIFPHLNYDLPFFGADLVSLPGGHLIALDMQPLFRDNLQ--YQKKYTEPIWE 136

Query: 120 LGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYC 179
              K+ + LP       +A       FL           R Q   +V   R       Y 
Sbjct: 137 TFQKHQKYLPWGGDFPEEATPFFSPAFL---------WTRPQKTELVE-TRVFEAFKDYL 196

Query: 180 KAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFL 239
           +A+L  V   E+ T   +L   +EAQ RYL +RAEKDP   +L +  G    ++ +  FL
Sbjct: 197 QAYLIFVKQTEQITNSEKLAEIKEAQLRYLRYRAEKDPARKMLTRFYGHEWTEEYIHGFL 246

Query: 240 FN 242
           F+
Sbjct: 257 FD 246

[Close]

BLAST of HG10007528 vs. ExPASy Swiss-Prot
Match: Q7NL65 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=pebB PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-10
Identity = 56/183 (30.60%), Postives = 77/183 (42.08%), Query Frame = 0


Query: 62  LQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRD---YREKYYKSLL 121
           LQVL+F   P  E+D+P F A++ T     ++ LD+ PL      RD   Y+ KY + ++
Sbjct: 68  LQVLNFVISPRLEYDLPFFGADLVTLPGGHLIALDMQPLF-----RDDPAYQAKYTEPIV 127

Query: 122 HLGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIY 181
            L     E   A L  G    E     F         FL            R       Y
Sbjct: 128 PL----FEAHRAHLEWGGDFPEEARPFF------SPAFLWTRPKETGTVETRVFAAFVDY 187

Query: 182 CKAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNF 241
             A+L+ V   E  T P  L     AQ RYL +RAEKDP  G+ R+  G    ++ +  F
Sbjct: 188 LNAYLDFVERAEPVTHPEGLAAVERAQLRYLHYRAEKDPARGMFRRFYGPEWTEEYIHGF 235

[Close]

BLAST of HG10007528 vs. ExPASy Swiss-Prot
Match: Q9K4U6 (15,16-dihydrobiliverdin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=pebA PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.9e-06
Identity = 50/187 (26.74%), Postives = 79/187 (42.25%), Query Frame = 0


Query: 62  LQVLDFAAFPEPEFDVPIFCANI--FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLH 121
           LQVL+  A+P    D PI   +I  F      + VLD  PL   + +  Y  +YYK L  
Sbjct: 67  LQVLNSVAYPAYTNDKPILGIDILWFGLKRKLVAVLDFQPL---VQEERYFCRYYKDLQI 126

Query: 122 LGTKYAEV---LPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVP 181
           L  ++ +        +    K +   V ++    D  Q  L ++   ++           
Sbjct: 127 LKNRFVDFNSQKTMKIYDSNKYFSPWVLLYNGSFDDLQCSLAKILDEFL----------- 186

Query: 182 IYCKAWLELVNNIEEE---TIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKD 241
               A+ ++ NN   E    IPS++    +    Y ++ AE+DP HGL +   G+T A  
Sbjct: 187 ---HAYWQVDNNNSREYIKIIPSKV---EQLHINYDIYSAERDPAHGLFKSYFGQTWADQ 233

[Close]

BLAST of HG10007528 vs. ExPASy TrEMBL
Match: A0A0A0LXG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616870 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.4e-114
Identity = 223/330 (67.58%), Postives = 244/330 (73.94%), Query Frame = 0


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL- 63
           SSRL FSLSFN PPFS+NCSSKN+ KRAF PISSISYQKFVQFALDETKLHTHLFPSPL 
Sbjct: 3   SSRLCFSLSFNSPPFSTNCSSKNRSKRAFFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  --------------------------------------QVLDFAAFPEPEFDVPIFCANI 123
                                                 QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKSKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVG 183
           FTAA+SSIVVLDLNPLHDVI+QR YREKYYKSLLHLGTKYAE+LP    L  ++ +    
Sbjct: 123 FTAANSSIVVLDLNPLHDVISQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLK---- 182

Query: 184 IFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREA 243
            F S   +   F +      I+F          Y KAWLEL+NN  EETIP +LM+NREA
Sbjct: 183 -FFSPIVIWSKFSSTESKYDILFS-----AFMDYYKAWLELMNNTGEETIPPQLMVNREA 242

Query: 244 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 295
           QHRYL WRAEKDPGH LLRKLIGETLAKD+VRNFLF+G+DELGSK+FLDYFPEYCCEDGT
Sbjct: 243 QHRYLSWRAEKDPGHHLLRKLIGETLAKDVVRNFLFHGVDELGSKKFLDYFPEYCCEDGT 302

[Close]

BLAST of HG10007528 vs. ExPASy TrEMBL
Match: A0A6J1JIV1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485492 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.0e-113
Identity = 222/335 (66.27%), Postives = 238/335 (71.04%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPS 60
           M S S LSF LSFN  PFSS+CSSKNKC+RAF P+S+ISYQKFVQFALDETKLHTHLFPS
Sbjct: 1   MASCSTLSFCLSFNSTPFSSSCSSKNKCRRAFFPVSAISYQKFVQFALDETKLHTHLFPS 60

Query: 61  PL---------------------------------------QVLDFAAFPEPEFDVPIFC 120
           PL                                       QVLDFAAFPE EFDVPIFC
Sbjct: 61  PLQEKYNSMISMDKNVKLQMLSFQAPKIRLLRSLNIESETMQVLDFAAFPETEFDVPIFC 120

Query: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAY 180
           ANIFTAASSSIVVLDLNPLHDVI QRDYREKYYKSLLHLG KYAE+LP    LT     +
Sbjct: 121 ANIFTAASSSIVVLDLNPLHDVINQRDYREKYYKSLLHLGIKYAELLPWGGKLTSESLKF 180

Query: 181 ERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLM 240
              + I+      +  +     + +  F          Y KAWLELVNN  EETIPSRLM
Sbjct: 181 FSPIVIWTKSSSTESTY----DILFSAFV--------DYYKAWLELVNNAAEETIPSRLM 240

Query: 241 INREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYC 295
           +NREAQHRYL WRAEKDPGHGLL+KLIGE LAKDLVRNFLFNG+DELGSKRFLDYFPEY 
Sbjct: 241 VNREAQHRYLSWRAEKDPGHGLLKKLIGEMLAKDLVRNFLFNGVDELGSKRFLDYFPEYY 300

[Close]

BLAST of HG10007528 vs. ExPASy TrEMBL
Match: A0A1S3BP29 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492001 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.0e-113
Identity = 225/330 (68.18%), Postives = 245/330 (74.24%), Query Frame = 0


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL- 63
           SSRLSFSLSFN PPFS+NC+SKN+ KRA  PISSISYQKFVQFALDETKLHTHLFPSPL 
Sbjct: 3   SSRLSFSLSFNSPPFSTNCNSKNRFKRACFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  --------------------------------------QVLDFAAFPEPEFDVPIFCANI 123
                                                 QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKAKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVG 183
           FTAA+SSIVVLDLNPLHDVITQR YREKYYKSLLHLGTKYAE+LP    L  ++ +    
Sbjct: 123 FTAANSSIVVLDLNPLHDVITQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLK---- 182

Query: 184 IFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREA 243
            F S   +   F +  + +Y +     +     Y KAWLEL+NN  EETIPS+LMINREA
Sbjct: 183 -FFSPIVIWSKF-SSTESKYDILSSAFM----DYYKAWLELMNNTVEETIPSQLMINREA 242

Query: 244 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 295
           QHRYL WRAEKDPGH LLRKLIGETLAKD+V+NFLFNGIDELGSK FLDYFPEY CEDGT
Sbjct: 243 QHRYLSWRAEKDPGHHLLRKLIGETLAKDVVQNFLFNGIDELGSKSFLDYFPEYRCEDGT 302

[Close]

BLAST of HG10007528 vs. ExPASy TrEMBL
Match: A0A6J1HBM1 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461368 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.5e-113
Identity = 222/335 (66.27%), Postives = 240/335 (71.64%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPS 60
           M S S LSF LSFN P  SS+CSSKNKC+ AFIP+S+ISY+KFVQFALDETKLHTHLFPS
Sbjct: 1   MASCSTLSFCLSFNSPLVSSSCSSKNKCRTAFIPVSAISYRKFVQFALDETKLHTHLFPS 60

Query: 61  PL---------------------------------------QVLDFAAFPEPEFDVPIFC 120
           PL                                       QVLDFAAFPE EFDVPIFC
Sbjct: 61  PLQEKYNSMISMDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPETEFDVPIFC 120

Query: 121 ANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAY 180
           ANIFTAASSSIVVLDLNPLHDVI QRDYREKYYKSL+HLGTKYAE+LP    LT     +
Sbjct: 121 ANIFTAASSSIVVLDLNPLHDVINQRDYREKYYKSLMHLGTKYAELLPWGGKLTSESLKF 180

Query: 181 ERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLM 240
              + I+      +  +     V +  F          Y KAWLELV+N  EETIPSRLM
Sbjct: 181 FSPIVIWTKSSSTESTY----DVLFSAFV--------DYYKAWLELVHNAAEETIPSRLM 240

Query: 241 INREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYC 295
           +NREAQHRYL WRAEKDPGHGLL+KLIGETLAKDLVRNFLFNG+DELGSKRFLDYFPEY 
Sbjct: 241 VNREAQHRYLSWRAEKDPGHGLLKKLIGETLAKDLVRNFLFNGVDELGSKRFLDYFPEYY 300

[Close]

BLAST of HG10007528 vs. ExPASy TrEMBL
Match: A0A6J1DJE9 (phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021651 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.9e-109
Identity = 213/334 (63.77%), Postives = 239/334 (71.56%), Query Frame = 0


Query: 1   MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRA-FIPISSISYQKFVQFALDETKLHTHLFP 60
           M S SRLSF   FN PPFSSNCS KNKC+RA F+P+S+ISYQKFVQFALDETKLHTHL P
Sbjct: 1   MDSCSRLSFCSPFNSPPFSSNCSGKNKCRRASFVPVSAISYQKFVQFALDETKLHTHLCP 60

Query: 61  SPL---------------------------------------QVLDFAAFPEPEFDVPIF 120
           +PL                                       QVLDFA FP+PEFDVPIF
Sbjct: 61  TPLQEKYNSMISMDKKAKLQMLSFQAPKIRLLRSLNIESEAMQVLDFAVFPKPEFDVPIF 120

Query: 121 CANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYE 180
           CANIF+AASSSIVVLDLNPLHDVI+QRDY+EKYY+SLLHLGTKYAE+LP    L  ++ +
Sbjct: 121 CANIFSAASSSIVVLDLNPLHDVISQRDYKEKYYESLLHLGTKYAELLPWGGKLTSESLK 180

Query: 181 RVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMI 240
                F S   +   F +      I+F          Y KAWLEL+NN  EET PSRLM+
Sbjct: 181 -----FFSPIVIWTKFPSTRSKYDILFS-----AFVDYYKAWLELMNNAREETNPSRLMV 240

Query: 241 NREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCC 295
           NREAQHRYL WR EKDPGHGLL++LIGE LAKDL+RNFLFNG+DELGSKRFL+YFPEYCC
Sbjct: 241 NREAQHRYLSWRVEKDPGHGLLKRLIGEALAKDLLRNFLFNGVDELGSKRFLEYFPEYCC 300

[Close]

BLAST of HG10007528 vs. TAIR 10
Match: AT3G09150.1 (phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) )

HSP 1 Score: 245.4 bits (625), Expect = 5.9e-65
Identity = 134/310 (43.23%), Postives = 181/310 (58.39%), Query Frame = 0


Query: 17  PFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL-------------- 76
           P   N + + + KR  + +S++SY++F + AL+ET+    L PS L              
Sbjct: 28  PNKINFTLRRRKKRFLLRVSAVSYKEFAESALEETRKRIVLEPSHLQYSSMTGLDGKTEL 87

Query: 77  -----------------------QVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNP 136
                                  QV DFA F EPE+D PIFCAN FT+ + +IVVLDLNP
Sbjct: 88  QMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDLNP 147

Query: 137 LHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNR 196
           LH +  Q DY++KYY  ++ +  KYAE  P     G+   E +   F S   M   F + 
Sbjct: 148 LHQLTDQTDYQDKYYNKIMSIYHKYAETFPWG---GKLTGESIK--FFSPLVMWTRFSSS 207

Query: 197 VQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGH 256
            +    +F     L+   Y +AWLE+   + EE  PS +  N EAQH+YL WRA+KDPGH
Sbjct: 208 KEKHKALF--SAFLE---YYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGH 267

Query: 257 GLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHR 290
           GLL++L+GE  AK+L+R+FLFNG+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE R
Sbjct: 268 GLLKRLVGEAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETR 327

[Close]

BLAST of HG10007528 vs. TAIR 10
Match: AT3G09150.2 (phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) )

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-64
Identity = 134/312 (42.95%), Postives = 181/312 (58.01%), Query Frame = 0


Query: 17  PFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPL-------------- 76
           P   N + + + KR  + +S++SY++F + AL+ET+    L PS L              
Sbjct: 28  PNKINFTLRRRKKRFLLRVSAVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKT 87

Query: 77  -------------------------QVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDL 136
                                    QV DFA F EPE+D PIFCAN FT+ + +IVVLDL
Sbjct: 88  ELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDL 147

Query: 137 NPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFL 196
           NPLH +  Q DY++KYY  ++ +  KYAE  P     G+   E +   F S   M   F 
Sbjct: 148 NPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWG---GKLTGESIK--FFSPLVMWTRFS 207

Query: 197 NRVQVRYIVFCIRGLLQVPIYCKAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDP 256
           +  +    +F     L+   Y +AWLE+   + EE  PS +  N EAQH+YL WRA+KDP
Sbjct: 208 SSKEKHKALF--SAFLE---YYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDP 267

Query: 257 GHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYE 290
           GHGLL++L+GE  AK+L+R+FLFNG+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE
Sbjct: 268 GHGLLKRLVGEAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYE 327

[Close]

BLAST of HG10007528 vs. TAIR 10
Match: AT3G09150.3 (phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) )

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-62
Identity = 118/228 (51.75%), Postives = 154/228 (67.54%), Query Frame = 0


Query: 62  LQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLG 121
           +QV DFA F EPE+D PIFCAN FT+ + +IVVLDLNPLH +  Q DY++KYY  ++ + 
Sbjct: 33  MQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDLNPLHQLTDQTDYQDKYYNKIMSIY 92

Query: 122 TKYAEVLPAALTLGRKAYERVVGIFLSHCDMDQVFLNRVQVRYIVFCIRGLLQVPIYCKA 181
            KYAE  P     G+   E +   F S   M   F +  +    +F     L+   Y +A
Sbjct: 93  HKYAETFPWG---GKLTGESIK--FFSPLVMWTRFSSSKEKHKALF--SAFLE---YYQA 152

Query: 182 WLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFN 241
           WLE+   + EE  PS +  N EAQH+YL WRA+KDPGHGLL++L+GE  AK+L+R+FLFN
Sbjct: 153 WLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVGEAKAKELLRDFLFN 212

Query: 242 GIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRGEFIG 290
           G+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE RPWD  G+FIG
Sbjct: 213 GVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTGQFIG 250

The following BLAST results are available for this feature:

BLAST of HG10007528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880083.1	3.5e-120	70.87	phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Benincasa hispida]	[more]
XP_023515585.1	4.4e-115	66.87	phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucurbita pepo subsp....	[more]
XP_004139053.1	4.9e-114	67.58	phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_022988175.1	4.2e-113	66.27	phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucurbita maxima]	[more]
XP_008450371.1	4.2e-113	68.18	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis me...	[more]

BLAST of HG10007528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR43	1.4e-63	42.95	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thalian...	[more]
Q93TM8	2.1e-11	28.33	Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 2...	[more]
Q10UW6	3.6e-11	29.67	Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain ...	[more]
Q7NL65	2.4e-10	30.60	Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain ATC...	[more]
Q9K4U6	7.9e-06	26.74	15,16-dihydrobiliverdin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (st...	[more]

BLAST of HG10007528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG3	2.4e-114	67.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616870 PE=3 SV=1	[more]
A0A6J1JIV1	2.0e-113	66.27	phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A1S3BP29	2.0e-113	68.18	phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A6J1HBM1	4.5e-113	66.27	phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Cucurbita moschata ...	[more]
A0A6J1DJE9	3.9e-109	63.77	phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Momordica charantia...	[more]

BLAST of HG10007528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09150.1	5.9e-65	43.23	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synth...	[more]
AT3G09150.2	1.0e-64	42.95	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synth...	[more]
AT3G09150.3	1.2e-62	51.75	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synth...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1500.20		coord: 174..243 e-value: 1.5E-15 score: 59.4 coord: 24..150 e-value: 1.5E-16 score: 62.8
None	No IPR available	PANTHER	PTHR34557:SF1	PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTIC	coord: 178..292 coord: 18..63 coord: 62..129
IPR009249	Ferredoxin-dependent bilin reductase	PFAM	PF05996	Fe_bilin_red	coord: 60..241 e-value: 4.4E-30 score: 105.1
IPR009249	Ferredoxin-dependent bilin reductase	PANTHER	PTHR34557	PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTIC	coord: 178..292 coord: 62..129
IPR009249	Ferredoxin-dependent bilin reductase	PANTHER	PTHR34557	PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTIC	coord: 18..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007528.1	HG10007528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010024	phytochromobilin biosynthetic process
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor