HG10007523 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCAAAACACAAAGCCTGAATAATGAACAAAGTAGGTTCCCTGACAAACCCTTCACAACAGGTGAGATTTGGTTAGCGGTTAAGGCTGTGGGCACCACCAAAACCTCGGGGCGAGATGGTTACATTGCGGAATTCTTTAATAAGTCATGGAACATCCTAAAGGATGACCTAGTTAGAGTGTTCCAAGAATTTTTTGGCAATGTCGATGAAACATACACTTGCCTCATCCCAAAAAAGATTGATGTTGCACTTGGTTGTACAAAATCATTGCACGGGTTCTCTCAAACCGACTTAAGAAAGTTTTACCAACCACCATTTTGGAATACCAATCTGCTCTTTTGGAAGGAAGACAAAATTCGGATGCTTCCCTTATTGCCAACAAAATCATTGAAGATTGACATAGAAAGAAGACTCAAGGAGTGGTAG ATGCCCAAAACACAAAGCCTGAATAATGAACAAAGTAGGTTCCCTGACAAACCCTTCACAACAGGTGAGATTTGGTTAGCGGTTAAGGCTGTGGGCACCACCAAAACCTCGGGGCGAGATGGTTACATTGCGGAATTCTTTAATAAGTCATGGAACATCCTAAAGGATGACCTAGTTAGAGTGTTCCAAGAATTTTTTGGCAATGTCGATGAAACATACACTTGCCTCATCCCAAAAAAGATTGATGTTGCACTTGGTTGTACAAAATCATTGCACGGGTTCTCTCAAACCGACTTAAGAAAGTTTTACCAACCACCATTTTGGAATACCAATCTGCTCTTTTGGAAGGAAGACAAAATTCGGATGCTTCCCTTATTGCCAACAAAATCATTGAAGATTGACATAGAAAGAAGACTCAAGGAGTGGTAG ATGCCCAAAACACAAAGCCTGAATAATGAACAAAGTAGGTTCCCTGACAAACCCTTCACAACAGGTGAGATTTGGTTAGCGGTTAAGGCTGTGGGCACCACCAAAACCTCGGGGCGAGATGGTTACATTGCGGAATTCTTTAATAAGTCATGGAACATCCTAAAGGATGACCTAGTTAGAGTGTTCCAAGAATTTTTTGGCAATGTCGATGAAACATACACTTGCCTCATCCCAAAAAAGATTGATGTTGCACTTGGTTGTACAAAATCATTGCACGGGTTCTCTCAAACCGACTTAAGAAAGTTTTACCAACCACCATTTTGGAATACCAATCTGCTCTTTTGGAAGGAAGACAAAATTCGGATGCTTCCCTTATTGCCAACAAAATCATTGAAGATTGACATAGAAAGAAGACTCAAGGAGTGGTAG MPKTQSLNNEQSRFPDKPFTTGEIWLAVKAVGTTKTSGRDGYIAEFFNKSWNILKDDLVRVFQEFFGNVDETYTCLIPKKIDVALGCTKSLHGFSQTDLRKFYQPPFWNTNLLFWKEDKIRMLPLLPTKSLKIDIERRLKEW Homology
BLAST of HG10007523 vs. NCBI nr
Match: XP_023518084.1 (uncharacterized protein LOC111781628 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09 Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of HG10007523 vs. NCBI nr
Match: KAA0056004.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 7.4e-07 Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = 0
BLAST of HG10007523 vs. NCBI nr
Match: XP_009335445.1 (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]) HSP 1 Score: 64.7 bits (156), Expect = 7.4e-07 Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of HG10007523 vs. NCBI nr
Match: TYK29577.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-06 Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of HG10007523 vs. NCBI nr
Match: XP_021852665.1 (uncharacterized protein LOC110792162 [Spinacia oleracea]) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-06 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of HG10007523 vs. ExPASy TrEMBL
Match: A0A5A7ULE1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001490 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.6e-07 Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = 0
BLAST of HG10007523 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 6.1e-07 Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of HG10007523 vs. ExPASy TrEMBL
Match: A0A5D3E0F6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001830 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 6.1e-07 Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of HG10007523 vs. ExPASy TrEMBL
Match: A0A6A2WMD5 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116951pilonHSYRG00119 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 7.9e-07 Identity = 28/82 (34.15%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of HG10007523 vs. ExPASy TrEMBL
Match: A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06 Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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