HG10007509 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007509
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	exosome complex component RRP45A-like
Location	Chr10: 6223728 .. 6227792 (+)
RNA-Seq Expression	HG10007509
Synteny	HG10007509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATCGAAACAGCCCTTCTTTCGGATTTGAGGGTTGATGGTCGGCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGTAATGTTTCTCATATGTTTCATTTTGTTTCACACTATGTATTTTCCGTTTGTGGTGTGTTTGTTGTGGTTGGTGATAATAATGAATTTTGTGCAGGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGCTTTGTGACTGCTCAGCTAGTTCAACCGTATAGGGATCGTGCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCCATGGCTGATCCCTCATTTGAGCCTGGCCGTCCAGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGTAATTATCTTTTTGGTTCTCTTAACTATCAATCTAAATCCTGTCGTGTTGACTAACTAATATATAGAGAATAAATTGAGCACAATCATTTTCTTGAGCTTCACAGTCAACAAATAATCTATTACATCAATCCATACACAGTAATCTAAGGTTGGAGGTATTAATGTAGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGGTAAGCTTTTGAATTTTTATTTTATTTTGTTTTGCATATTGTTATAATGATGCTAATTTATGGTATTTAACAATCCTGCAAGCAGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTATCAACTTTTCGAAGACCTGAGTGCTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATTCCCCTGAGGTAAGCTCTTCAAGATTTTCTTGGAAGTTAACTTGAAGTGCATCCTGTTCAAAGGATGTGACATTATCTACTTAAATACATGATGGTATATACAAACCCAACTATCCCATAGGCCATATCTGAGCAGTTTTATGTCTTGTAAACGTCAAACATTCTGCTTTCACATCCACATGTTTATCCATGGTCTTAAATTTATTTATTTATTTTCTTGTGAAACAAACAATAGCATTTGGGTTTATCTTCGATCCTAGCTGCCTGTATCCTTGAATGTATCACAGGGATGTTGCTATTTGACAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTATTGCAGTAACCTTTGCATTTTTTCGTAGTGAGAGCACTCTGGTAAGCTCAATTTCTTTCAATGTGTTGTGTAAAGAGTTCAGTTATATAGCAGGGTTTTTTAAATTTTGGGGTGCTGTGCAGGTGATAGATCCAACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCTTGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTGAGATTCTTTTTGAATAAGACTTAATGATGTAGCATCCTACTCTGTTTTGTGTTTTCCCTTGTTTTACCTCTTGTAGTTACGGTAGCTAACTTGACTTCTGCTTCTCTATAGTTAGTTCCATCCTGCTTAGGGAAAAATCATTACCTTATGTTTCAAATATCTATTATTTTGGATAAGAAACCAGCTTGGTTAAAGTAATGAAAGTACACAAGGAAGGCCCTTGAAGAATAAAAAGATGGCCTACGCAAAGGAATAAAAAGAAAATGGATGAGGTTGAAGAGAAATGTAAAACAAGATTACAGAGTACTTTAATAAAAATTAAAAAACAGAGGATAGTTTTAGCTCATAAGACACTCCACGTGTTTTAGTTTTTAAGGGCAAATTGCAATCCCCCTAACCAAAAACAGGGTGGTAGTTGCAATTACACCCTTAAACTTTCAAGTGTAAAATTTGAGTCCTTAAACTTATACAAGTGTTAAAATTGGAATCTCATACTTACAAAATTGTAGAAATTTTAACAATTGTATAAGTTTGAGAGTTCGATTTTTATCATTTGGAGTCCAATTTCTACAGTTATTATAAGTTTGAGGGTCCAATTTTAACACTTGTAGTAGTTTGAGGGCCCAATTTTTACAATTGAAAGTTTGAGGGTGTAATTGCAACTACCATCATACTTAAAGGATTGTTTTTGTAATTTGCCCTAGTTTTAACTTGTAAGACACTCCAAAGAAGAACACCTAGAGGCACTGAAACGTGAGGGCATTTGAAACCTTTTTTCCAAGATTTCTATGAACCTCTAAAGATTCCTCTGTCTATCTCAATACTATGGCTTCCTCAAAGTAGTGACAACCTTCTAAATAATACATCCCCTAGGGAGGGGGATGTATGAGCACCTCCTCCACCATGTCCCGATAGTATGAGATAGTCTTTTTACTATTTCTTATTTTCATGTTCTTATTTTAGATATGCTGTTGGGTTTGCATTGAATAATGCTGCCTATAACCATTATTTAAATTAATACTTTTACTCATTTCCACCACAATTTTATGTTAGGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAGCGTCACCCTCCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAAGGCATATCCGATGGTCAAAAGAGTATCAATGATCTTTCTGACAGATTGAAATTGAATTCTGAAGACAGTATCGCCAGTCAAAGCGGGAGTATTACGAGTGATGTATCCACAAATCAAGGACAATTAAACAAGAGAGATTTTGATTCTAAGAATTTCATTGGGGGCCCTTCATGCTGGTAAGGTGTTACCTTGATTATGGTTACATATAAGTTTTAACCAATTTATGTTCACAACAATAGGACTTTTTCTCTTATTTAATGTGTCCCCAAAAGAAAATCTTAGGTATGAACTGTGAAGTTCTGCAATCAATATCGTACACTGATATTACATGCCATCTGACAGTGTTAGTCTTCAGAAATTTTTTTCTTAACCTCCATTTTCTTTTTCCTAGGGACCCATACTCCAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGTACTTCACTGAGACCCTATAATTCCTCTATTTGCTTTAATTTTTTTTAATATCATTTTTATTCTATCCTCTGAAACCATTTTTTCCTTGTAGTATATATGAATTAAGTATGGATGTTAATTGTTAACTTAATTAGTTTTCAATATTATTGGCTGCAACTTCATTTGGTGACTGATGCAGGACAGCTTTAAAACTTGTGCTTTATGGCTGTCTTGAGGGAGACTTATTGCAATTATGGCTAGAAGTATTATAAAGAATAACTACTGTATCGTGTGTCAATAATGCAGAAAAGTCATAAAAGCATGCAAGAAGAATGAAACATTGAGAGAGAGACGTCATACGCATAAACAATTAATACTTCAACATGATTCATCTTTTTGATTGAATCTTATTATTATTATTTTTTGGATGAGAAACATTTCAGTGATGGGAGTTCAATTTATGTATATGCATTTTGTTGGATCGGGGAAATAAAGATGGAAACATACTGTAGTGCATTTGCAGGCTTCCTAAATGAAAAAAAATGTTTATCTTGATATATTTACTGCTTTTTCATCTTAATTTTGGCCCAAGCTTATCTTAGAAACCAAACATGCTCTTGGCATCCAGCAGTTATAAAAATCAACTTGCAAAATTATTCTCTTCCTTTTGAGTCTGCCTTTTCTTATGCTAGCTCGTTGCAGGAAATCTAACCGTGACAAAGAAACAGAACCTGAGCGATGAAATGATATCCTCCGAGTCTAATGTTGATGAACAAGAAGCCAAAGTCGATCAGACAAATTTACCTCCTGTTGCTGCTAAAACTTTGTCAGAAGAAAACAGGAAGAAAACTTTGAAAGATGCCGTGAAGCCAAAGAATAAGAGGAAAAAGAAGACCACCACCCCTAACGATGCAGATTAG

mRNA sequence

ATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATCGAAACAGCCCTTCTTTCGGATTTGAGGGTTGATGGTCGGCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGCTTTGTGACTGCTCAGCTAGTTCAACCGTATAGGGATCGTGCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCCATGGCTGATCCCTCATTTGAGCCTGGCCGTCCAGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTATCAACTTTTCGAAGACCTGAGTGCTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATTCCCCTGAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTATTGCAGTAACCTTTGCATTTTTTCGTAGTGAGAGCACTCTGGTGATAGATCCAACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCTTGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAGCGTCACCCTCCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAAGGCATATCCGATGGTCAAAAGAGTATCAATGATCTTTCTGACAGATTGAAATTGAATTCTGAAGACAGTATCGCCAGTCAAAGCGGGAGTATTACGAGTGATGTATCCACAAATCAAGGACAATTAAACAAGAGAGATTTTGATTCTAAGAATTTCATTGGGGGCCCTTCATGCTGGGACCCATACTCCAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGAAATCTAACCGTGACAAAGAAACAGAACCTGAGCGATGAAATGATATCCTCCGAGTCTAATGTTGATGAACAAGAAGCCAAAGTCGATCAGACAAATTTACCTCCTGTTGCTGCTAAAACTTTGTCAGAAGAAAACAGGAAGAAAACTTTGAAAGATGCCGTGAAGCCAAAGAATAAGAGGAAAAAGAAGACCACCACCCCTAACGATGCAGATTAG

Coding sequence (CDS)

ATGGAGCAGAGATTAGCCAATACATGGCGTCTCTCTGCAAACGAAAAGAAATTCATCGAAACAGCCCTTCTTTCGGATTTGAGGGTTGATGGTCGGCGCCCTTTTGACTACCGTAATCTCACCATCAACTTTGGCAAGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCAAACTCACGTAATGGGCTTTGTGACTGCTCAGCTAGTTCAACCGTATAGGGATCGTGCTAATGAGGGCACTCTTTCTATCTATACTGAGTTTTCTCCCATGGCTGATCCCTCATTTGAGCCTGGCCGTCCAGGAGAGTCTGCTGTCGAGTTAGGGCGTGTAATAGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATATGGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTGTGGGCCATCCGAGTCGATCTCCACATTTTAGATAATGGGGGAAACCTTGTGGATGCGGCTAATATTGCTGCTTTGGCTGCTTTATCAACTTTTCGAAGACCTGAGTGCTCATTGGGGGGAGATGATGGTCAGGAAGTGATAGTTCATTCCCCTGAGGTTAGGGAGCCACTTCCGTTGATCATACATCATCTCCCTATTGCAGTAACCTTTGCATTTTTTCGTAGTGAGAGCACTCTGGTGATAGATCCAACTCACTATGAAGAGGCCGTTATGGGAGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGCGCTATTCAAAAAGCAGGAGGAGAGGGTGTACTTCAGAGTGTGATCATGCAATGTCTGCGAATTGCTTGTGTCAAAGCTGGTGATATTACAACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGGAAGATTAAGCGTCACCCTCCTGTTAATTTGGATGTTGGTGGAGGTGCAGCTAATCTGAAGGATAGCCAAGGCATATCCGATGGTCAAAAGAGTATCAATGATCTTTCTGACAGATTGAAATTGAATTCTGAAGACAGTATCGCCAGTCAAAGCGGGAGTATTACGAGTGATGTATCCACAAATCAAGGACAATTAAACAAGAGAGATTTTGATTCTAAGAATTTCATTGGGGGCCCTTCATGCTGGGACCCATACTCCAAAGGTGTTGATTCAGATTTCTTGAAAGCTACTTTAGCTTCACGTGGAAATCTAACCGTGACAAAGAAACAGAACCTGAGCGATGAAATGATATCCTCCGAGTCTAATGTTGATGAACAAGAAGCCAAAGTCGATCAGACAAATTTACCTCCTGTTGCTGCTAAAACTTTGTCAGAAGAAAACAGGAAGAAAACTTTGAAAGATGCCGTGAAGCCAAAGAATAAGAGGAAAAAGAAGACCACCACCCCTAACGATGCAGATTAG

Protein sequence

MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVGGGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDVSTNQGQLNKRDFDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTTPNDAD

Homology

[Close]

BLAST of HG10007509 vs. NCBI nr
Match: XP_038879556.1 (exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879557.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879558.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 839.7 bits (2168), Expect = 1.2e-239
Identity = 430/452 (95.13%), Postives = 439/452 (97.12%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQ+VQPYRDR NEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQIVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVH PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDVSTNQGQLNKRDFDSK 360
            GAANLK SQGISDG+KSIND+SDRLKLNSE+SIAS S SI SDVSTNQGQLNKRDFD+K
Sbjct: 301 EGAANLKHSQGISDGRKSINDVSDRLKLNSEESIASPSRSIKSDVSTNQGQLNKRDFDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQT 420
           NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKK+N SDEM+SSE+ VDEQE KVDQT
Sbjct: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKENPSDEMMSSETEVDEQETKVDQT 420

Query: 421 NLPPVAAKTLSEENRKKTLKDAVKPKNKRKKK 453
           NLPP AAKTLSE+N KKTLKDAVKPKNKRKKK
Sbjct: 421 NLPPAAAKTLSEDNGKKTLKDAVKPKNKRKKK 452

[Close]

BLAST of HG10007509 vs. NCBI nr
Match: XP_022988100.1 (exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome complex component RRP45A-like [Cucurbita maxima])

HSP 1 Score: 807.7 bits (2085), Expect = 5.0e-230
Identity = 417/462 (90.26%), Postives = 434/462 (93.94%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGS+EVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN KDSQG+SD QKSIN+ SDRLKLNSE++IA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ++SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKR-KKKTTTPNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKR KKKTT PN AD
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of HG10007509 vs. NCBI nr
Match: XP_022960790.1 (exosome complex component RRP45A-like [Cucurbita moschata])

HSP 1 Score: 798.5 bits (2061), Expect = 3.0e-227
Identity = 416/463 (89.85%), Postives = 430/463 (92.87%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESA+ELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAIELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN+KDS      QKSIN+ SDRLKLNSEDSIA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANMKDS------QKSINEFSDRLKLNSEDSIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTT--PNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKRKKK TT  PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of HG10007509 vs. NCBI nr
Match: KAG7023846.1 (Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 797.7 bits (2059), Expect = 5.2e-227
Identity = 416/462 (90.04%), Postives = 430/462 (93.07%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN+KDS      QKSIN+ SDRLKLNSE+SIA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANMKDS------QKSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKR-KKKTTTPNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKR KKKTT PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 456

[Close]

BLAST of HG10007509 vs. NCBI nr
Match: KAG6590195.1 (Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 797.3 bits (2058), Expect = 6.7e-227
Identity = 416/463 (89.85%), Postives = 430/463 (92.87%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN+KDS      QKSIN+ SDRLKLNSE+SIA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANMKDS------QKSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTT--PNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKRKKK TT  PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of HG10007509 vs. ExPASy Swiss-Prot
Match: Q9M209 (Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 9.4e-139
Identity = 271/464 (58.41%), Postives = 336/464 (72.41%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DR NEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H  E REPLPLIIHHLPIA TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP +   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDGQKSINDLS----DRLKLNSEDSIASQSGSITSDVSTNQGQLNKR 360
            G    +K+    S  Q+   ++S    +RLKL++E+  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTVTKKQNLSD--EMISSESN 420
           + ++ NF GGPS WDPYS+ +D D LK +LASRG+     + TKK N S   + +  E +
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGSGNAQKVGVEIS 420

Query: 421 VDEQEAKVDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKT 454
           V+E   ++ +        K    ++ + TLKDAVKPK KRK K+
Sbjct: 421 VEEVTGELGK--------KDTKHKDGEMTLKDAVKPKKKRKNKS 438

[Close]

BLAST of HG10007509 vs. ExPASy Swiss-Prot
Match: Q9LDM2 (Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 5.7e-120
Identity = 209/292 (71.58%), Postives = 245/292 (83.90%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DR +EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PE REPLPLIIHHLPIA TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of HG10007509 vs. ExPASy Swiss-Prot
Match: Q06265 (Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-68
Identity = 128/275 (46.55%), Postives = 189/275 (68.73%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +RA EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHSPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+ GD   EV +++PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGD---EVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  +++C +IA VK  +IT  I  A+E     R+
Sbjct: 246 LKDQVLRCSKIAGVKVAEITELILKALENDQKVRK 277

[Close]

BLAST of HG10007509 vs. ExPASy Swiss-Prot
Match: Q9JHI7 (Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-68
Identity = 127/275 (46.18%), Postives = 189/275 (68.73%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +RA EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHSPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+    G+EV +++PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSV---QGEEVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of HG10007509 vs. ExPASy Swiss-Prot
Match: Q4QR75 (Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-68
Identity = 127/275 (46.18%), Postives = 189/275 (68.73%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRN+ I+FG D G   V+LG+T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDMESLCVVS 130
           P  +RA EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +D ESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEVIVHSPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+    G+EV +++PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSV---QGEEVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+FAFF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of HG10007509 vs. ExPASy TrEMBL
Match: A0A6J1JG94 (exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC111485448 PE=3 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.4e-230
Identity = 417/462 (90.26%), Postives = 434/462 (93.94%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGS+EVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN KDSQG+SD QKSIN+ SDRLKLNSE++IA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ++SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKR-KKKTTTPNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKR KKKTT PN AD
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of HG10007509 vs. ExPASy TrEMBL
Match: A0A6J1HA43 (exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461486 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.5e-227
Identity = 416/463 (89.85%), Postives = 430/463 (92.87%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSI+TEFSPMADPSFEPGRPGESA+ELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAIELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDV-STNQGQLNKRDFDS 360
              AN+KDS      QKSIN+ SDRLKLNSEDSIA QS SI SDV STNQGQLNKRD D+
Sbjct: 301 RAVANMKDS------QKSINEFSDRLKLNSEDSIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLA+RGN T TKKQ+ SDE +SSE+ +DEQEAKVD+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 TNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTT--PNDAD 461
            NLPPVAAK LSEEN KKTLKDAVKPKNKRKKK TT  PN AD
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of HG10007509 vs. ExPASy TrEMBL
Match: A0A0A0M072 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 8.0e-226
Identity = 412/461 (89.37%), Postives = 428/461 (92.84%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLSANEKKFIETALLSDLRVDGR PFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAAN+AALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVH PEVREPLPLIIHHLPIAVTFAFFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDVSTNQGQLNKRDFDSK 360
           GG  +LKDSQGISDGQKSIND         ++S+ SQSGSI +D STNQGQL+KRD D+K
Sbjct: 301 GGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKNDASTNQGQLDKRDSDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQT 420
           NFIGGPSCWDP+SKG DSDFLKATLASRGNLT TKK++LSDEM+SSES VDEQEAKVD+ 
Sbjct: 361 NFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDEV 420

Query: 421 NLPPVAAKTLSEENRKKTLKDAVKPKNKR-KKKTTTPNDAD 461
           NL PVAAKTLSEEN KKTLKDAVKPKNKR KKKTTTP D D
Sbjct: 421 NLSPVAAKTLSEENGKKTLKDAVKPKNKRKKKKTTTPIDVD 452

[Close]

BLAST of HG10007509 vs. ExPASy TrEMBL
Match: A0A1S3BP69 (exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492017 PE=3 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.6e-224
Identity = 410/460 (89.13%), Postives = 427/460 (92.83%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           MEQRLANTWRLS NEKKFIETALLSDLRVDGR PFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSVNEKKFIETALLSDLRVDGRCPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVH PEVREPLPLIIHHLPIAVTFAFFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSDVSTNQGQLNKRDFDSK 360
           GGA +LKDSQGISDG+KSIND         ++SI SQSGSI +D STNQGQL+KRDFD+K
Sbjct: 301 GGAGSLKDSQGISDGEKSIND---------QESIVSQSGSIKNDESTNQGQLDKRDFDAK 360

Query: 361 NFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAKVDQT 420
           NFIGGPSCWDP+SKGVDS+FLKATLASRGNLT  KK+++SDEM+SSES VDEQEAKV + 
Sbjct: 361 NFIGGPSCWDPHSKGVDSNFLKATLASRGNLTAMKKEDMSDEMMSSESMVDEQEAKVGEV 420

Query: 421 NLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTTPNDAD 461
           NL PVAAKTLSEEN KKTLKDAVK KNKRKKK TT  DAD
Sbjct: 421 NLSPVAAKTLSEENGKKTLKDAVKRKNKRKKKKTTTIDAD 451

[Close]

BLAST of HG10007509 vs. ExPASy TrEMBL
Match: A0A6J1DLD8 (exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021616 PE=3 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 2.1e-218
Identity = 405/464 (87.28%), Postives = 424/464 (91.38%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV
Sbjct: 1   MEHRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDR NEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDDGQEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLEGDDGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVH PEVREPLPLIIHHLPIAVTFAFFRSESTLV+DPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVVDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPVNLDVG 300
           AIQKAGGEGVLQS+IMQCLRIA VKAGDITTKIKNAVET+NSARQLRKIKRHP VNLDVG
Sbjct: 241 AIQKAGGEGVLQSMIMQCLRIASVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 G---GAANLKDSQGISDGQKSINDLSDRLKLNSEDSIASQSGSITSD-VSTNQGQLNKRD 360
           G   G AN+K+SQG+SDGQKSIN+ SDRLKLNS++S+ASQSGS  SD VSTNQGQ+ KRD
Sbjct: 301 GGVAGVANMKNSQGVSDGQKSINEFSDRLKLNSQESMASQSGSTESDIVSTNQGQIIKRD 360

Query: 361 FDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKQNLSDEMISSESNVDEQEAK 420
            D+KNFIGGPS WDPYSKGVDSD+LK+TLASRGN T+ KKQ  S     S   + EQ  K
Sbjct: 361 LDAKNFIGGPSSWDPYSKGVDSDYLKSTLASRGNPTMMKKQKDSSVETMSSEELGEQ-VK 420

Query: 421 VDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKTTTPNDAD 461
            +Q +LP  AAKTLSEENRKKTLKDAVKPKNKRKKK +TPN AD
Sbjct: 421 DNQADLPLAAAKTLSEENRKKTLKDAVKPKNKRKKK-STPNVAD 462

[Close]

BLAST of HG10007509 vs. TAIR 10
Match: AT3G60500.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 495.0 bits (1273), Expect = 6.7e-140
Identity = 271/464 (58.41%), Postives = 336/464 (72.41%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DR NEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H  E REPLPLIIHHLPIA TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP +   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDGQKSINDLS----DRLKLNSEDSIASQSGSITSDVSTNQGQLNKR 360
            G    +K+    S  Q+   ++S    +RLKL++E+  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTVTKKQNLSD--EMISSESN 420
           + ++ NF GGPS WDPYS+ +D D LK +LASRG+     + TKK N S   + +  E +
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGSGNAQKVGVEIS 420

Query: 421 VDEQEAKVDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKT 454
           V+E   ++ +        K    ++ + TLKDAVKPK KRK K+
Sbjct: 421 VEEVTGELGK--------KDTKHKDGEMTLKDAVKPKKKRKNKS 438

[Close]

BLAST of HG10007509 vs. TAIR 10
Match: AT3G60500.2 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 495.0 bits (1273), Expect = 6.7e-140
Identity = 271/464 (58.41%), Postives = 336/464 (72.41%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DR NEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H  E REPLPLIIHHLPIA TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP +   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDGQKSINDLS----DRLKLNSEDSIASQSGSITSDVSTNQGQLNKR 360
            G    +K+    S  Q+   ++S    +RLKL++E+  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTVTKKQNLSD--EMISSESN 420
           + ++ NF GGPS WDPYS+ +D D LK +LASRG+     + TKK N S   + +  E +
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGSGNAQKVGVEIS 420

Query: 421 VDEQEAKVDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKT 454
           V+E   ++ +        K    ++ + TLKDAVKPK KRK K+
Sbjct: 421 VEEVTGELGK--------KDTKHKDGEMTLKDAVKPKKKRKNKS 438

[Close]

BLAST of HG10007509 vs. TAIR 10
Match: AT3G60500.3 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 495.0 bits (1273), Expect = 6.7e-140
Identity = 271/464 (58.41%), Postives = 336/464 (72.41%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RLAN WRL+ NE KF+ETAL S+LRVDGR  +DYR LTI FGK+ GSSEVQLGQTHV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DR NEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++GQEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H  E REPLPLIIHHLPIA TF FF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPPV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP +   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GGGAANLKDSQGISDGQKSINDLS----DRLKLNSEDSIASQSGSITSDVSTNQGQLNKR 360
            G    +K+    S  Q+   ++S    +RLKL++E+  +S                  +
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------K 360

Query: 361 DFDSKNFIGGPSCWDPYSKGVDSDFLKATLASRGN----LTVTKKQNLSD--EMISSESN 420
           + ++ NF GGPS WDPYS+ +D D LK +LASRG+     + TKK N S   + +  E +
Sbjct: 361 EEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVTKSSSTKKMNGSGNAQKVGVEIS 420

Query: 421 VDEQEAKVDQTNLPPVAAKTLSEENRKKTLKDAVKPKNKRKKKT 454
           V+E   ++ +        K    ++ + TLKDAVKPK KRK K+
Sbjct: 421 VEEVTGELGK--------KDTKHKDGEMTLKDAVKPKKKRKNKS 438

[Close]

BLAST of HG10007509 vs. TAIR 10
Match: AT3G12990.1 (ribonuclease PH45A )

HSP 1 Score: 432.6 bits (1111), Expect = 4.1e-121
Identity = 209/292 (71.58%), Postives = 245/292 (83.90%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DR +EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PE REPLPLIIHHLPIA TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of HG10007509 vs. TAIR 10
Match: AT3G12990.2 (ribonuclease PH45A )

HSP 1 Score: 432.6 bits (1111), Expect = 4.1e-121
Identity = 209/292 (71.58%), Postives = 245/292 (83.90%), Query Frame = 0


Query: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60
           ME RL N WRL+ NE KF+E+AL S+LRVDGR  +DYR LTI FGK+ GSS+VQLGQTHV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRANEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DR +EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180
           VD ESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHSPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+H PE REPLPLIIHHLPIA TF FF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

The following BLAST results are available for this feature:

BLAST of HG10007509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879556.1	1.2e-239	95.13	exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_0388795...	[more]
XP_022988100.1	5.0e-230	90.26	exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome...	[more]
XP_022960790.1	3.0e-227	89.85	exosome complex component RRP45A-like [Cucurbita moschata]	[more]
KAG7023846.1	5.2e-227	90.04	Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590195.1	6.7e-227	89.85	Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of HG10007509 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M209	9.4e-139	58.41	Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 ...	[more]
Q9LDM2	5.7e-120	71.58	Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 ...	[more]
Q06265	1.3e-68	46.55	Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3	[more]
Q9JHI7	1.3e-68	46.18	Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1	[more]
Q4QR75	1.3e-68	46.18	Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=...	[more]

BLAST of HG10007509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JG94	2.4e-230	90.26	exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC11148544...	[more]
A0A6J1HA43	1.5e-227	89.85	exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A0A0M072	8.0e-226	89.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1	[more]
A0A1S3BP69	2.6e-224	89.13	exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1DLD8	2.1e-218	87.28	exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of HG10007509 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60500.1	6.7e-140	58.41	3'-5'-exoribonuclease family protein	[more]
AT3G60500.2	6.7e-140	58.41	3'-5'-exoribonuclease family protein	[more]
AT3G60500.3	6.7e-140	58.41	3'-5'-exoribonuclease family protein	[more]
AT3G12990.1	4.1e-121	71.58	ribonuclease PH45A	[more]
AT3G12990.2	4.1e-121	71.58	ribonuclease PH45A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 396..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..357
None	No IPR available	PANTHER	PTHR11097:SF26	EXOSOME COMPLEX COMPONENT RRP45A-LIKE	coord: 4..341
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 4..341
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 37..168 e-value: 6.5E-22 score: 78.4
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 5..293 e-value: 6.2E-97 score: 326.4
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 197..262 e-value: 7.9E-12 score: 45.0
IPR033100	Exosome complex component RRP45	CDD	cd11368	RNase_PH_RRP45	coord: 11..270 e-value: 1.73684E-130 score: 375.712
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 193..291
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 10..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007509.1	HG10007509.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process
biological_process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
biological_process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0034473	U1 snRNA 3'-end processing
biological_process	GO:0034475	U4 snRNA 3'-end processing
biological_process	GO:0034476	U5 snRNA 3'-end processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0000178	exosome (RNase complex)