HG10007495 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007495
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr10: 6038076 .. 6040446 (+)
RNA-Seq Expression	HG10007495
Synteny	HG10007495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGGTACATCTTTAATCCATATCTAGTAGTGCAAGTTCCCTATCCAATTAGCACCTCACAGTCCTTGAGGTTTTCTGTTTTGTGCCTGACAATATTGAATCTTATCTTATTTGAAGGTGATATTGTGAAATTGGAGGGAACGACGGAAGTCAAAAGTTAACTTTGGTAGAATTATTTCTGGAAACTATCTTAAGAAGAAAAAAATATAGCAAGAGAGTGACCATTTGTTGTTTTCGGATATTTGTGTTTGATGGTTTTCTAAAGCAGCCATTCCATGCAGAATGATAGTTATTAGGTTTAGGATATTGTGATTTACTTTTATTACATTATAACTTTTTTATAAAAAAAAAAGGCAACACAGAGGAATGTGCAGGATAGGAAAACTTTCATATGGCTGTTTAAACTCACAAACAATGAACTATTATTAAATTATTATTGTTGTTCTTTTTCTTTCTCTCTCTCTCTCTCTCTCTTTTTCTTATTAAATAAAAAACACCAAATGTCCCTGAATAACAATAGCATTTCAATGGTTTCAGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATGCACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGTAAGTTTAATTGCTGTCCAATCTTAGAAAATTCTTTATCTTGTTAGTACAACTATCGTGCTTTTAGTCCCATGTTTGAAACTTTGAACATTCCAATAAAAAAATTGGTCAAGTTACAATTGTATAATTATATTACTGAATACTTGCTTGTGTTTCTTGACATACTGTTGCAGGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGTATGTAATTATCTCGACTTCATACAAACGAGAGACTGGTTTCACTGTTATTATCTTTGCCATTACTTGGCTGTGCTCATCTATCATAGTGTTGAAATCAAAAGCAAAAAGACACTTCTAATTCACACATGTAACACTCTTGACCCTGTTAAGAAAGGGAACTTCAAGTGCCAGAGCATTTGCAAAAGGGTTTTGGTCCAACTTCAGGAAAAATGGTGCTTGGGCTTCTAAACCTATTGAATGCAATTTGTTTGTTGTCATACATCAGTTAAATTTTTGCATTCACTTCGAAGGTCTTTTTTGTAAATGTTCCATGAAATATTAAACCGACTGTTGAGTGGTCAATGTTGATGATATGAATTAGGACCTACACTTTTACATCCAATGCTTTTCATACCATGATTAGCTTTAGCTAGCTCAAAGGATAATACTTCTGAAATTTATACTTTCTCATTGAAATTTTGTTACTGTGTAGTTTGTCTGCACGGGTTATTACATTGTGTTCTTCTATCTGCAATCATTTAATGAAAGCTTTTTTTTGTGTGTGTGTCTAAACCCTAAAAGGAATGTGTATTGTGATAATTTATTGTATCAAATATAGCTTCGGTATACACAGAGCGCCGGTGCTGCATTGCACAAAGTCTTAACAAAATTTTCATGCTTTGTAGTTTATTTTTGTCATGGACAGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTTGTATCTTTTTGGTGGACTGGATTGTTTTTGCTTTTGTTCTTTCTGCTATTTAAACAAGTTCAATCTATCAACTGCAATTACAGTTACTCCCGCTGACTTAATATAGACAAAAGAATTCCATTTTTTTGGCTATGTTGCTCACTTTTCTTATTCAACAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATTAGAAGGTCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGACGGTTCTGAACAGCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG

mRNA sequence

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATGCACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATTAGAAGGTCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGACGGTTCTGAACAGCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG

Coding sequence (CDS)

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATGCACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATTAGAAGGTCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGACGGTTCTGAACAGCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG

Protein sequence

MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

Homology

[Close]

BLAST of HG10007495 vs. NCBI nr
Match: XP_008450423.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_008450424.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >KAA0056302.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa] >TYK18850.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 511.5 bits (1316), Expect = 4.3e-141
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECLTQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE H
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK++ESGYRL+DGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of HG10007495 vs. NCBI nr
Match: XP_008450422.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 4.3e-141
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECLTQSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE H
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 261

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK++ESGYRL+DGSEQQ GSSL NKASE
Sbjct: 262 SDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of HG10007495 vs. NCBI nr
Match: XP_004139033.1 (nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus] >KGN66486.1 hypothetical protein Csa_007630 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 260/269 (96.65%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE H
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK+NES YRL+DGSEQQNGSSLTNKASE
Sbjct: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of HG10007495 vs. NCBI nr
Match: XP_038879324.1 (nuclear transcription factor Y subunit A-1-like [Benincasa hispida])

HSP 1 Score: 507.3 bits (1305), Expect = 8.1e-140
Identity = 260/269 (96.65%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE DGK   
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEVDGK--- 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
            DK+NESGYRL++GSEQQNGSSLTN+ASE
Sbjct: 241 -DKVNESGYRLNEGSEQQNGSSLTNRASE 265

[Close]

BLAST of HG10007495 vs. NCBI nr
Match: XP_022154358.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60
           MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQS 120
           SNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQKMQHVSSTLPAMHGEC TQS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+  E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 MHSDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           MHSDK NESGY L+DGSEQ+NGSS  NKAS+
Sbjct: 241 MHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

[Close]

BLAST of HG10007495 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 126/263 (47.91%), Postives = 164/263 (62.36%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLT 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEMHSDKLNESGYRLD-DGSEQ 258
             E    +  E G   +  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of HG10007495 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-46
Identity = 125/250 (50.00%), Postives = 153/250 (61.20%), Query Frame = 0


Query: 1   MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNG 60
           M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECL 120
             ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 TQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE 240
           PVFVNAKQYQ ILRRRQARAKAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK  
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 236

Query: 241 ADGKEMHSDK 244
            +  +  +++
Sbjct: 246 TEASKRKAEE 236

[Close]

BLAST of HG10007495 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 72/164 (43.90%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 84  TGSPHSAGSYRQD-AQKMQHVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYG 143
           T S H      +  A+K +  S T P +     ++S     V    +A    PY DPYY 
Sbjct: 2   TSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGLYPYPDPYYR 61

Query: 144 GMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAE 203
            + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK E
Sbjct: 62  SVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 121

Query: 204 AEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKE 239
           A  ++IKA+KPY+HESRH HAIRR R  GGRF  AKK   D KE
Sbjct: 122 ARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of HG10007495 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22
Identity = 75/180 (41.67%), Postives = 98/180 (54.44%), Query Frame = 0


Query: 91  GSYRQDAQKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFY 150
           GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 151 GHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKAR 210
                G    ++G     +PLP +  ++PVFVNAKQY GILRRRQ+RA+ E++ K IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 211 KPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTN 266
           KPYLHESRH HAIRR R  GGRF    + D  E H D  +E    L  G      SS T+
Sbjct: 133 KPYLHESRHLHAIRRPRGCGGRFLNAKKED--EHHEDSSHEEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of HG10007495 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.7e-19
Identity = 85/242 (35.12%), Postives = 119/242 (49.17%), Query Frame = 0


Query: 30  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHS 89
           + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++
Sbjct: 24  ISWGVVPTDSVANRRGSAESLSLK---VDSRPGHIQTTKQISFQDQD-SSSTQSTGQSYT 83

Query: 90  AGSYRQDAQKMQHVSSTLPAMHGECLTQ-------STQLELVG----HSIACASN---PY 149
             +   D    + +S    A  G  +TQ         Q  + G    H     +N    Y
Sbjct: 84  EVASSGDDNPSRQIS--FSAKSGSEITQRKGFASNPKQGSMTGFPNIHFAPAQANFSFHY 143

Query: 150 QDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQA 209
            DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ 
Sbjct: 144 ADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQ 203

Query: 210 RAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKEMHSDKL 247
           RAK EA+ K I+ARKPYLHESRH HA++R R SGGRF        +  +A  +E   DKL
Sbjct: 204 RAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKL 259

[Close]

BLAST of HG10007495 vs. ExPASy TrEMBL
Match: A0A1S3BPV3 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECLTQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE H
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK++ESGYRL+DGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of HG10007495 vs. ExPASy TrEMBL
Match: A0A5D3D5Q2 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00430 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECLTQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE H
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK++ESGYRL+DGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of HG10007495 vs. ExPASy TrEMBL
Match: A0A1S3BP85 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECLTQSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE H
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 261

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK++ESGYRL+DGSEQQ GSSL NKASE
Sbjct: 262 SDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of HG10007495 vs. ExPASy TrEMBL
Match: A0A0A0M2S3 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.1e-141
Identity = 260/269 (96.65%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE H
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240

Query: 241 SDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           SDK+NES YRL+DGSEQQNGSSLTNKASE
Sbjct: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of HG10007495 vs. ExPASy TrEMBL
Match: A0A6J1DK42 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111021642 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.7e-131
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60
           MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQS 120
           SNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQKMQHVSSTLPAMHGEC TQS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+  E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 MHSDKLNESGYRLDDGSEQQNGSSLTNKASE 270
           MHSDK NESGY L+DGSEQ+NGSS  NKAS+
Sbjct: 241 MHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

[Close]

BLAST of HG10007495 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.8e-51
Identity = 126/263 (47.91%), Postives = 164/263 (62.36%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLT 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEMHSDKLNESGYRLD-DGSEQ 258
             E    +  E G   +  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of HG10007495 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.8e-51
Identity = 126/263 (47.91%), Postives = 164/263 (62.36%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLT 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAD 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEMHSDKLNESGYRLD-DGSEQ 258
             E    +  E G   +  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of HG10007495 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50
Identity = 130/265 (49.06%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPA--MHGEC 120
           ESND  S S +  +N E D   K+ QA      A S R D   M+     L    MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQP 120

Query: 121 LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
           L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE 240
           PV+VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE 240

Query: 241 ADGKEMHSDKLNESGYRLD-DGSEQ 258
            +  E    +  E G   +  GSEQ
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of HG10007495 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50
Identity = 130/265 (49.06%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPA--MHGEC 120
           ESND  S S +  +N E D   K+ QA      A S R D   M+     L    MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQP 120

Query: 121 LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
           L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE 240
           PV+VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE 240

Query: 241 ADGKEMHSDKLNESGYRLD-DGSEQ 258
            +  E    +  E G   +  GSEQ
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of HG10007495 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-47
Identity = 125/250 (50.00%), Postives = 153/250 (61.20%), Query Frame = 0


Query: 1   MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNG 60
           M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECL 120
             ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 TQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE 240
           PVFVNAKQYQ ILRRRQARAKAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK  
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 236

Query: 241 ADGKEMHSDK 244
            +  +  +++
Sbjct: 246 TEASKRKAEE 236

The following BLAST results are available for this feature:

BLAST of HG10007495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450423.1	4.3e-141	96.65	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
XP_008450422.1	4.3e-141	96.65	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_004139033.1	1.3e-140	96.65	nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuc...	[more]
XP_038879324.1	8.1e-140	96.65	nuclear transcription factor Y subunit A-1-like [Benincasa hispida]	[more]
XP_022154358.1	1.2e-130	90.41	nuclear transcription factor Y subunit A-1-like [Momordica charantia]	[more]

BLAST of HG10007495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.4e-49	47.91	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	3.2e-46	50.00	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.9e-22	43.90	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.5e-22	41.67	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	5.7e-19	35.12	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of HG10007495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPV3	2.1e-141	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A5D3D5Q2	2.1e-141	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BP85	2.1e-141	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A0A0M2S3	6.1e-141	96.65	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G61358...	[more]
A0A6J1DK42	5.7e-131	90.41	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of HG10007495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	9.8e-51	47.91	nuclear factor Y, subunit A1	[more]
AT5G12840.3	9.8e-51	47.91	nuclear factor Y, subunit A1	[more]
AT5G12840.2	2.2e-50	49.06	nuclear factor Y, subunit A1	[more]
AT5G12840.4	2.2e-50	49.06	nuclear factor Y, subunit A1	[more]
AT3G20910.1	2.3e-47	50.00	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 174..196 score: 74.15 coord: 205..228 score: 74.77
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 170..231 e-value: 1.2E-32 score: 124.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 174..228 e-value: 3.9E-25 score: 88.2
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 32..260
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 171..231 score: 33.900478
None	No IPR available	GENE3D	6.10.250.2430		coord: 171..233 e-value: 9.7E-28 score: 98.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..269
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 32..260
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 176..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007495.1	HG10007495.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity