HG10007480 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTCTCTCTATGGAAACCCAAGAGAGTACCTGACTTAGCTCTACCTTTCAGCTTGGAAATACTATCGAATGAAGAACGCACTCCCCTTTCTGGACGGAGTAAAAGAACTTCAGATAATCCACCTCCCCCACCGCATGCCTCATCTATCATTTTACACAAGCAATCTGGGATCAATTTTAGAATATTACCAAAAGGCGTACGTATTCCTCCGTCTGGGCCGAGTCAAAGAGCTTCTGAGAGTCCAGCTCCCCCACTGCATGTCCCATCTGTCGTTTTACACAAGGAATCTGAAATCAACTTCAGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAGAAGATTTTCAGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACAGAATAGATTGATTTTGTGA ATGCATTTCTCTCTATGGAAACCCAAGAGAGTACCTGACTTAGCTCTACCTTTCAGCTTGGAAATACTATCGAATGAAGAACGCACTCCCCTTTCTGGACGGAGTAAAAGAACTTCAGATAATCCACCTCCCCCACCGCATGCCTCATCTATCATTTTACACAAGCAATCTGGGATCAATTTTAGAATATTACCAAAAGGCGTACGTATTCCTCCGTCTGGGCCGAGTCAAAGAGCTTCTGAGAGTCCAGCTCCCCCACTGCATGTCCCATCTGTCGTTTTACACAAGGAATCTGAAATCAACTTCAGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAGAAGATTTTCAGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACAGAATAGATTGATTTTGTGA ATGCATTTCTCTCTATGGAAACCCAAGAGAGTACCTGACTTAGCTCTACCTTTCAGCTTGGAAATACTATCGAATGAAGAACGCACTCCCCTTTCTGGACGGAGTAAAAGAACTTCAGATAATCCACCTCCCCCACCGCATGCCTCATCTATCATTTTACACAAGCAATCTGGGATCAATTTTAGAATATTACCAAAAGGCGTACGTATTCCTCCGTCTGGGCCGAGTCAAAGAGCTTCTGAGAGTCCAGCTCCCCCACTGCATGTCCCATCTGTCGTTTTACACAAGGAATCTGAAATCAACTTCAGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAGAAGATTTTCAGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACAGAATAGATTGATTTTGTGA MHFSLWKPKRVPDLALPFSLEILSNEERTPLSGRSKRTSDNPPPPPHASSIILHKQSGINFRILPKGVRIPPSGPSQRASESPAPPLHVPSVVLHKESEINFRVLPKGVRIPPSGPSRRFSDYPPPPPHAPSVVLQNRLIL Homology
BLAST of HG10007480 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 8.0e-46 Identity = 95/134 (70.90%), Postives = 108/134 (80.60%), Query Frame = 0
BLAST of HG10007480 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 158.7 bits (400), Expect = 3.7e-35 Identity = 86/136 (63.24%), Postives = 102/136 (75.00%), Query Frame = 0
BLAST of HG10007480 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 7.8e-33 Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0
BLAST of HG10007480 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]) HSP 1 Score: 145.2 bits (365), Expect = 4.3e-31 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of HG10007480 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29 Identity = 77/134 (57.46%), Postives = 92/134 (68.66%), Query Frame = 0
BLAST of HG10007480 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.8e-35 Identity = 86/136 (63.24%), Postives = 102/136 (75.00%), Query Frame = 0
BLAST of HG10007480 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of HG10007480 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 6.6e-30 Identity = 77/134 (57.46%), Postives = 92/134 (68.66%), Query Frame = 0
BLAST of HG10007480 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of HG10007480 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17 Identity = 52/78 (66.67%), Postives = 57/78 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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