HG10007405 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAACCTTGAGAAACAGGATTTAGATGTAGTTCTTGTTTGTCCAGTTTGCAGGAGGAAGGATGTAACAGTGCCTCATGCATTGTTTGAATGTTTCAGAGCTAAAGAAGTTTGGTCGAATACTGTTTCTAACAGCTGGTTTTCTGAACTAAGGCACAATGATAACTTAGATTTTTGCATGGTGTTGGCAGGGAGATTAAATGACTTGGAGCTTGTATGGGTTTGCATTACCGCTTGGGCTATTTGGGGAGATAGGAATAAGTTCTATAAAAAGGAAAATATACCTTTTGTGGAGCACCATGGTGGGCTTTGGTGGTAATTGGGCCTTCCACCGGGTCTATGTTGGCTTCTGTAATAACCAGAGATTAGGAGGGGGACATAAATGAACCGTGAACACATCTGAATGAGAGGGATCTTGAGGACATGAAAGTATAGTTAAGAAAGGCTTAAAAGAATTGAAAGTTACTACCTATACTAACAAAGTACACCTTCCTTTTTGGTGGCTCAATCATAAGTACTTCAAAGTTAAACATGCTTAGATTGGGTCAATACTATGTTGGGTGACCTCCTGAGAATTTTTCTAGGATGCATGTGCACTTTTAGAAGCATTCAAGACAAGCAAAGTTGATGTAGCTAAGTCGCAGGGCCATCAAGTTCTGAATCCTTATCTTTTTAAGCCCGACGGATGCTGAAGCTTTGACTATTTATAAGGGTCTTCAGTTGGCTGTTAGAATGGAGCTATCTCAAATTCTGGTTTTATTTGATTCCTTGGGAATTATTCAGATGCTCATGGGCAATGCGGTGATCCAGGTGGAATCGACAAATTATATGGCTGATATTAAGGAAATAAAGAAAAAATATATATACATTTCATAA ATGGGGAACCTTGAGAAACAGGATTTAGATGTAGTTCTTGTTTGTCCAGTTTGCAGGAGGAAGGATGTAACAGTGCCTCATGCATTGTTTGAATGTTTCAGAGCTAAAGAAGTTTGGTCGAATACTGTTTCTAACAGCTGGTTTTCTGAACTAAGGCACAATGATAACTTAGATTTTTGCATGGTGTTGGCAGGGAGATTAAATGACTTGGAGCTTGTATGGGTTTGCATTACCGCTTGGGCTATTTGGGGAGATAGGAATAAGTTCTATAAAAAGGAAAATATACCTTTTGTGGAGCACCATGGTGGGCTTTGGTGCCCGACGGATGCTGAAGCTTTGACTATTTATAAGGGTCTTCAGTTGGCTGTTAGAATGGAGCTATCTCAAATTCTGGTTTTATTTGATTCCTTGGGAATTATTCAGATGCTCATGGGCAATGCGGTGATCCAGGTGGAATCGACAAATTATATGGCTGATATTAAGGAAATAAAGAAAAAATATATATACATTTCATAA ATGGGGAACCTTGAGAAACAGGATTTAGATGTAGTTCTTGTTTGTCCAGTTTGCAGGAGGAAGGATGTAACAGTGCCTCATGCATTGTTTGAATGTTTCAGAGCTAAAGAAGTTTGGTCGAATACTGTTTCTAACAGCTGGTTTTCTGAACTAAGGCACAATGATAACTTAGATTTTTGCATGGTGTTGGCAGGGAGATTAAATGACTTGGAGCTTGTATGGGTTTGCATTACCGCTTGGGCTATTTGGGGAGATAGGAATAAGTTCTATAAAAAGGAAAATATACCTTTTGTGGAGCACCATGGTGGGCTTTGGTGCCCGACGGATGCTGAAGCTTTGACTATTTATAAGGGTCTTCAGTTGGCTGTTAGAATGGAGCTATCTCAAATTCTGGTTTTATTTGATTCCTTGGGAATTATTCAGATGCTCATGGGCAATGCGGTGATCCAGGTGGAATCGACAAATTATATGGCTGATATTAAGGAAATAAAGAAAAAATATATATACATTTCATAA MGNLEKQDLDVVLVCPVCRRKDVTVPHALFECFRAKEVWSNTVSNSWFSELRHNDNLDFCMVLAGRLNDLELVWVCITAWAIWGDRNKFYKKENIPFVEHHGGLWCPTDAEALTIYKGLQLAVRMELSQILVLFDSLGIIQMLMGNAVIQVESTNYMADIKEIKKKYIYIS Homology
BLAST of HG10007405 vs. NCBI nr
Match: XP_030498122.1 (uncharacterized protein LOC115713779 [Cannabis sativa]) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-06 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of HG10007405 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia]) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-06 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of HG10007405 vs. NCBI nr
Match: XP_030502555.1 (uncharacterized protein LOC115717715 [Cannabis sativa]) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-05 Identity = 31/87 (35.63%), Postives = 43/87 (49.43%), Query Frame = 0
BLAST of HG10007405 vs. NCBI nr
Match: TXG60858.1 (hypothetical protein EZV62_012221 [Acer yangbiense]) HSP 1 Score: 59.3 bits (142), Expect = 3.7e-05 Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of HG10007405 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa]) HSP 1 Score: 58.9 bits (141), Expect = 4.9e-05 Identity = 26/81 (32.10%), Postives = 41/81 (50.62%), Query Frame = 0
BLAST of HG10007405 vs. ExPASy TrEMBL
Match: A0A7N2L6E8 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.6e-07 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of HG10007405 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of HG10007405 vs. ExPASy TrEMBL
Match: A0A803PKJ2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 32/87 (36.78%), Postives = 43/87 (49.43%), Query Frame = 0
BLAST of HG10007405 vs. ExPASy TrEMBL
Match: A0A803PF68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of HG10007405 vs. ExPASy TrEMBL
Match: A0A7N2LT45 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05 Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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