HG10007398 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007398
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	programmed cell death protein 2
Location	Chr10: 4468343 .. 4471670 (-)
RNA-Seq Expression	HG10007398
Synteny	HG10007398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCTCAGGCTTGGTTGGATCCCGTGAATTTGCCGTCTGGAAGGTCTTGCGTTTGTGACATATGTGGAGAGCCTTTGCAGTTTTTGCTCCAGGTATTTGTTTAGTTTCAAATTTTTGCGTGTTTTCTTTTGCTTTCTCCTTACATCTTGTGCATGTCCGTTTGAATTCTCTAAACAATTAAGGGGGAGTTGGAGTTGTGAATTCCACTCCTTGTTTGTTCTATGGAGTTTGTGGGCCCCACGACTAAAAAAAGTCAATTTCATGCCTTATCCTTACACTATGGGCCTTACGACTAAACAACCTTTCAGGCTTCACAACTTCACTCTTTGCCCTGAACGCCCCCTTAGTAACTAAAATCGAAAGAAAGATTTTGTAAAATGATAGTCTAGTGACTCTATATGTGGGGAAATACATAATGAAATTACTTTATCAAATTTGCAACATGTTGAGGAGTTAGGAAATACCTTTTGTGTATTTTTTAAGGTGCGAGATCATATAGCTTCTTTTCATTGCAAACTATTATTGACGTTTCACACGGAAGTATACATTATGATGGTTTGTTCCCGTTCATTAAATTGTTAGATTTATGCTCCTATTGTGGAGAAGGACTCAACATTTCATCGAACGTTATTTGTGTTTATGTGTCCATCCATGACTTGTCTTCTACGAGATCAACACGAACAATGGAAAAGCAAGTCTGAGAAGTCATCTCGTAGGTATTACTAGCAGGCTTTCTGATGAAATCATTTTACTTGATCATCATCCTACACTTTAAAATTTTCTTTATTTCTTTAGTAACCTTGTACTTGTTTTGGAAGTGTGAAGGTTTTCCGCGGCCAATTACCCCGCAGTAATCCCTTTTACTTGAGTGAGCCCCCAAAACATGATGGAAGTGATATAGCTTGTGAATATGGAGGTAGTTTTGATTTATTCTTCCTTCCATCGAAGGTCTTAAATTACTTTAATACATTGATGTTCTTTAAAATTGCACTGATTTATAAAACATGTCTTAACATATGTGATGTTGTTTTAGTTGCACGTTGTAACTGGTGTGGTACTTGGAAAGGAGACAAAGTTTGTAGTAAGTGTAGAACAGTACGCTATTGTTCTGAGAAACATCAGGTAACATATTTGCAGCGCTGCTGCCAGCCTGCAAGTACAATTTCTTGTATTTTGAACTTTCAACACGTCAAAACCAAATTAACTTCTTGATTCCGATCCTCAATACTCTATTCTATATATCTTTAGGCTATTCATTGGCGTACTGGGCATAAAACTGATTGCCAACGGATGTGCATGTCTTCTCAGTTGTCAAGTTCTAGACTGACTGACAGTCATTCCGAAACAGATATTGAGAAAGGTTGGTGAAGAAAAAACTTATCTGGGTATTAATGAGATAATAGGAAGATTCATATTTTTTTATTTTATTTTTTGGATTTGGTCCTTGTCCTGGATTTCTAGTTTCTTTTGCAAGATTCATGACTTGGACTTCATTTGTTTTTTGTGTAGAATATTTGAAGGATTATCAATATCAATAGTTTATATTTATATATAGTAGCACTAACCTTGAAAAATATTTTAATCTGGTAGAAGCTCTAGGATCAATTGCTTGACTAAGATGTATGGGAAGTAGCTCTTAAAATTTAACTGAGAATTATTTGCTTTTCCGACAGTTTCAAGCAAGCATCTTTGGCCTGAATTTGAGATCATGCATGAATATGAGAGTGAGTTCGACATTGAAATATCTCATGACAATTCTTATGCAAATGCTTTGGTTAGTAAGGATAGGATGGATGACTCGATGAAGTCCTTGTTGGCCAATTTTGAGGTATTGGTCTTTATGGCATCATATCATTTGAGAACTTTAATCTTCTTTGGTAGTGGCCTTAGTGTCTTTTTTTGTATCTCTATTTCTTAGAAGTTGTTTAACTATTTTGAAGAATTGAATTTCCTTTTGTAACATCGAGTTGGGTTTCTTCATATAAGAGGCTCCTTTTGTCTGTTTTGCTTCTTTTTTATATTTTTTTTTTGTAGTCTGTAAGGCCTCCAATTCTGTACACATATAAGAGAAAGGGTAAAAGAGGTAAAAACGAGAAGAATAATATAGATGAGGGAGGAAGTTCGTTAGGGAGAGAGGGGGGACCATGATGAGTAGGAAAGAAGTGGGGACCAGTGGGTGGGAGGAGGTTTTAGGCAGGAGGAAGGAGATCAGGGAGGATAGGAAATCAGTAGACAAGCTTTGGCTTGAGGGAGGGGATTCCCAGCCCTCTGGAAAGTGCTGGTGATTAGTTTTGTGTCTTGGTTCATCTTGCTATTTCTTCTTATTTCATTTCGTTGTAATCTTTCCAAGAGGTTTATAAATAAATTTATATCCAGAGCTTGGCTCTGTTCTTGGAACTTTGTTGGGATTTTACTGTGTGCAGGGAAAGGATCTTTCATTTATATACGAAAGTGTGATATTTCATCAAAAAGCTTAATTGTTTTGTTGCTAGAGTTTATGAAATTTTTCGTATACAGGGAGATGATGATAGAAAGTCTTGGGCCTCTTTTCAAGGTCGCTTATCAAAGGCACCTGAACAAGTATTGAGGTATTATTAATGTTTCAAGTTTTCTACTGAAGTTTTACCAACTTGATTGAACTTGATCGAACTTTATCATGTCCAAAGATCCCTGGCCAAAGGGAACTAAAAATCACAAAAGTTGATCATTTGCTTGATATTTTGTAAATTATGAATGAAGTAAAAATTTCTCTGGCCTTAGATGCTATTTGAATCAGGAGACTAAATAAAATCAAAATCTTATTATCATATAAACATTTTAGCCTATTCGTATATTTGCAAGTGATGCTACCACACTCGGTGATGATCGAAATGTGCAGTTACATTTTTACTTGACTAAGTTATTCATCTCAATGCCAATATGTTATTAATTTCATTAATAAAAAAAATGGAAACAGATATTGTAGAGATGTGGGATCTAAACCTTTATGGCCAATGTCAAGTGGTTTGCCTTCCAAAGCAGATATCCCAAAATGCAGTTACTGCGACAGTCCCATGTGTTACGAATTTCAGGTAAGTCCTACACCCTTCTTTTTTCTGGTTTCACATTTAGATTCTTTAGTTTCGAAAGTTATAGATACTTTGCATTGGGTTACAACAGATCTTGCCTCAGTTGCTTTACTATTTTGGGGTAAAGAATGATGTGGATTCACTCGACTGGGCGACGATTGTTGTGTATACGTGTGAAGCTTCCTGTGAGTCAAGCATAGCGTATAAAGAGGAGTTTGCTTGGGTTCAACTCTCTACCCCATCTGTTCACCAGTAA

mRNA sequence

ATGGCACCTCAGGCTTGGTTGGATCCCGTGAATTTGCCGTCTGGAAGGTCTTGCGTTTGTGACATATGTGGAGAGCCTTTGCAGTTTTTGCTCCAGATTTATGCTCCTATTGTGGAGAAGGACTCAACATTTCATCGAACGTTATTTGTGTTTATGTGTCCATCCATGACTTGTCTTCTACGAGATCAACACGAACAATGGAAAAGCAAGTCTGAGAAGTCATCTCGTAGTGTGAAGGTTTTCCGCGGCCAATTACCCCGCAGTAATCCCTTTTACTTGAGTGAGCCCCCAAAACATGATGGAAGTGATATAGCTTGTGAATATGGAGTTGCACGTTGTAACTGGTGTGGTACTTGGAAAGGAGACAAAGTTTGTAGTAAGTGTAGAACAGTACGCTATTGTTCTGAGAAACATCAGGCTATTCATTGGCGTACTGGGCATAAAACTGATTGCCAACGGATGTGCATGTCTTCTCAGTTGTCAAGTTCTAGACTGACTGACAGTCATTCCGAAACAGATATTGAGAAAGTTTCAAGCAAGCATCTTTGGCCTGAATTTGAGATCATGCATGAATATGAGAGTGAGTTCGACATTGAAATATCTCATGACAATTCTTATGCAAATGCTTTGGTTAGTAAGGATAGGATGGATGACTCGATGAAGTCCTTGTTGGCCAATTTTGAGGGAGATGATGATAGAAAGTCTTGGGCCTCTTTTCAAGGTCGCTTATCAAAGGCACCTGAACAAGTATTGAGATATTGTAGAGATGTGGGATCTAAACCTTTATGGCCAATGTCAAGTGGTTTGCCTTCCAAAGCAGATATCCCAAAATGCAGTTACTGCGACAGTCCCATGTGTTACGAATTTCAGATCTTGCCTCAGTTGCTTTACTATTTTGGGGTAAAGAATGATGTGGATTCACTCGACTGGGCGACGATTGTTGTGTATACGTGTGAAGCTTCCTGTGAGTCAAGCATAGCGTATAAAGAGGAGTTTGCTTGGGTTCAACTCTCTACCCCATCTGTTCACCAGTAA

Coding sequence (CDS)

ATGGCACCTCAGGCTTGGTTGGATCCCGTGAATTTGCCGTCTGGAAGGTCTTGCGTTTGTGACATATGTGGAGAGCCTTTGCAGTTTTTGCTCCAGATTTATGCTCCTATTGTGGAGAAGGACTCAACATTTCATCGAACGTTATTTGTGTTTATGTGTCCATCCATGACTTGTCTTCTACGAGATCAACACGAACAATGGAAAAGCAAGTCTGAGAAGTCATCTCGTAGTGTGAAGGTTTTCCGCGGCCAATTACCCCGCAGTAATCCCTTTTACTTGAGTGAGCCCCCAAAACATGATGGAAGTGATATAGCTTGTGAATATGGAGTTGCACGTTGTAACTGGTGTGGTACTTGGAAAGGAGACAAAGTTTGTAGTAAGTGTAGAACAGTACGCTATTGTTCTGAGAAACATCAGGCTATTCATTGGCGTACTGGGCATAAAACTGATTGCCAACGGATGTGCATGTCTTCTCAGTTGTCAAGTTCTAGACTGACTGACAGTCATTCCGAAACAGATATTGAGAAAGTTTCAAGCAAGCATCTTTGGCCTGAATTTGAGATCATGCATGAATATGAGAGTGAGTTCGACATTGAAATATCTCATGACAATTCTTATGCAAATGCTTTGGTTAGTAAGGATAGGATGGATGACTCGATGAAGTCCTTGTTGGCCAATTTTGAGGGAGATGATGATAGAAAGTCTTGGGCCTCTTTTCAAGGTCGCTTATCAAAGGCACCTGAACAAGTATTGAGATATTGTAGAGATGTGGGATCTAAACCTTTATGGCCAATGTCAAGTGGTTTGCCTTCCAAAGCAGATATCCCAAAATGCAGTTACTGCGACAGTCCCATGTGTTACGAATTTCAGATCTTGCCTCAGTTGCTTTACTATTTTGGGGTAAAGAATGATGTGGATTCACTCGACTGGGCGACGATTGTTGTGTATACGTGTGAAGCTTCCTGTGAGTCAAGCATAGCGTATAAAGAGGAGTTTGCTTGGGTTCAACTCTCTACCCCATCTGTTCACCAGTAA

Protein sequence

MAPQAWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQHEQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWPEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKNDVDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSVHQ

Homology

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BLAST of HG10007398 vs. NCBI nr
Match: XP_038879360.1 (programmed cell death protein 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 688.3 bits (1775), Expect = 3.3e-194
Identity = 324/341 (95.01%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLF FMCPSMTCLLRDQH
Sbjct: 86  AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFAFMCPSMTCLLRDQH 145

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWK KS+KSSRSVKVFRGQLPRSNPFY SEPPKHDGSD ACE GVARCNWCGTWKGDKV
Sbjct: 146 EQWKRKSDKSSRSVKVFRGQLPRSNPFYSSEPPKHDGSDKACESGVARCNWCGTWKGDKV 205

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           C KCRTVRYCSEKHQAIHWRTGHKTDCQRMC+SSQLSSSRLT+SHSETDIEKVSSKHLWP
Sbjct: 206 CGKCRTVRYCSEKHQAIHWRTGHKTDCQRMCVSSQLSSSRLTNSHSETDIEKVSSKHLWP 265

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEISHDNSYANA+V KDRMDDSMKSLLANFEGDDDRKSWASFQGRLS
Sbjct: 266 EFEIMHEYESEFDIEISHDNSYANAMVCKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 325

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWPM SGLPSK DIPKCSYC  PMCYEFQILPQLLYYFGVKND
Sbjct: 326 KAPEQVLRYCRDVGSKPLWPMPSGLPSKEDIPKCSYCSGPMCYEFQILPQLLYYFGVKND 385

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS-VHQ 345
           VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLS PS VHQ
Sbjct: 386 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSVPSAVHQ 426

[Close]

BLAST of HG10007398 vs. NCBI nr
Match: XP_038879358.1 (programmed cell death protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 682.6 bits (1760), Expect = 1.8e-192
Identity = 323/342 (94.44%), Postives = 328/342 (95.91%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLF FMCPSMTCLLRDQH
Sbjct: 86  AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFAFMCPSMTCLLRDQH 145

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEY-GVARCNWCGTWKGDK 124
           EQWK KS+KSSRSVKVFRGQLPRSNPFY SEPPKHDGSD ACE  G+ARCNWCGTWKGDK
Sbjct: 146 EQWKRKSDKSSRSVKVFRGQLPRSNPFYSSEPPKHDGSDKACESGGLARCNWCGTWKGDK 205

Query: 125 VCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLW 184
           VC KCRTVRYCSEKHQAIHWRTGHKTDCQRMC+SSQLSSSRLT+SHSETDIEKVSSKHLW
Sbjct: 206 VCGKCRTVRYCSEKHQAIHWRTGHKTDCQRMCVSSQLSSSRLTNSHSETDIEKVSSKHLW 265

Query: 185 PEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRL 244
           PEFEIMHEYESEFDIEISHDNSYANA+V KDRMDDSMKSLLANFEGDDDRKSWASFQGRL
Sbjct: 266 PEFEIMHEYESEFDIEISHDNSYANAMVCKDRMDDSMKSLLANFEGDDDRKSWASFQGRL 325

Query: 245 SKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKN 304
           SKAPEQVLRYCRDVGSKPLWPM SGLPSK DIPKCSYC  PMCYEFQILPQLLYYFGVKN
Sbjct: 326 SKAPEQVLRYCRDVGSKPLWPMPSGLPSKEDIPKCSYCSGPMCYEFQILPQLLYYFGVKN 385

Query: 305 DVDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS-VHQ 345
           DVDSLDWATIVVYTCEASCESSIAYKEEFAWVQLS PS VHQ
Sbjct: 386 DVDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSVPSAVHQ 427

[Close]

BLAST of HG10007398 vs. NCBI nr
Match: XP_038879357.1 (programmed cell death protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 669.5 bits (1726), Expect = 1.6e-188
Identity = 324/379 (85.49%), Postives = 328/379 (86.54%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLF FMCPSMTCLLRDQH
Sbjct: 86  AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFAFMCPSMTCLLRDQH 145

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYG--------------- 124
           EQWK KS+KSSRSVKVFRGQLPRSNPFY SEPPKHDGSD ACE G               
Sbjct: 146 EQWKRKSDKSSRSVKVFRGQLPRSNPFYSSEPPKHDGSDKACESGGRFDLFFLLSKSSNY 205

Query: 125 -----------------------VARCNWCGTWKGDKVCSKCRTVRYCSEKHQAIHWRTG 184
                                  VARCNWCGTWKGDKVC KCRTVRYCSEKHQAIHWRTG
Sbjct: 206 FNTLLFFKIALIYNMSSICDVVLVARCNWCGTWKGDKVCGKCRTVRYCSEKHQAIHWRTG 265

Query: 185 HKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWPEFEIMHEYESEFDIEISHDNSY 244
           HKTDCQRMC+SSQLSSSRLT+SHSETDIEKVSSKHLWPEFEIMHEYESEFDIEISHDNSY
Sbjct: 266 HKTDCQRMCVSSQLSSSRLTNSHSETDIEKVSSKHLWPEFEIMHEYESEFDIEISHDNSY 325

Query: 245 ANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLSKAPEQVLRYCRDVGSKPLWPMS 304
           ANA+V KDRMDDSMKSLLANFEGDDDRKSWASFQGRLSKAPEQVLRYCRDVGSKPLWPM 
Sbjct: 326 ANAMVCKDRMDDSMKSLLANFEGDDDRKSWASFQGRLSKAPEQVLRYCRDVGSKPLWPMP 385

Query: 305 SGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKNDVDSLDWATIVVYTCEASCESSI 345
           SGLPSK DIPKCSYC  PMCYEFQILPQLLYYFGVKNDVDSLDWATIVVYTCEASCESSI
Sbjct: 386 SGLPSKEDIPKCSYCSGPMCYEFQILPQLLYYFGVKNDVDSLDWATIVVYTCEASCESSI 445

[Close]

BLAST of HG10007398 vs. NCBI nr
Match: XP_008451091.1 (PREDICTED: programmed cell death protein 2 [Cucumis melo])

HSP 1 Score: 666.4 bits (1718), Expect = 1.3e-187
Identity = 311/341 (91.20%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSC+CDICGEPLQFL+QIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 72  AWLDPVNLPSGRSCLCDICGEPLQFLIQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 131

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFR QLP +NPFY SEPPKHDGSD  C+ GVARC WCGTWKGDKV
Sbjct: 132 EQWKSKSEKSSRSVKVFRSQLPHNNPFYSSEPPKHDGSDKLCQSGVARCTWCGTWKGDKV 191

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCRTVRYCSEKHQA HWRTGHKTDCQRMCMSSQLSSS+LT++H ETDIEKVSSKHLWP
Sbjct: 192 CSKCRTVRYCSEKHQATHWRTGHKTDCQRMCMSSQLSSSKLTNNHHETDIEKVSSKHLWP 251

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEIS DNSYANALV KDRMDDSMKSLLA FEGDDDRKSWASFQ R+S
Sbjct: 252 EFEIMHEYESEFDIEISQDNSYANALVCKDRMDDSMKSLLAKFEGDDDRKSWASFQARIS 311

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWP SSGLPS+ADIPKC+YC  PMCYEFQILPQLLYYFGVKND
Sbjct: 312 KAPEQVLRYCRDVGSKPLWPTSSGLPSEADIPKCNYCSGPMCYEFQILPQLLYYFGVKND 371

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSV-HQ 345
           VDSLDWATIVVYTCEASCESS+AYKEEFAWVQLS PS  HQ
Sbjct: 372 VDSLDWATIVVYTCEASCESSVAYKEEFAWVQLSVPSAGHQ 412

[Close]

BLAST of HG10007398 vs. NCBI nr
Match: KAA0055661.1 (programmed cell death protein 2 [Cucumis melo var. makuwa] >TYK09916.1 programmed cell death protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 665.2 bits (1715), Expect = 3.0e-187
Identity = 310/341 (90.91%), Postives = 321/341 (94.13%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSC+CDICGEPLQFL+QIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 2   AWLDPVNLPSGRSCLCDICGEPLQFLIQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 61

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFR QLPR+NPFY SEPPKHDGSD  C+ GVARC WCGTWKGDKV
Sbjct: 62  EQWKSKSEKSSRSVKVFRSQLPRNNPFYSSEPPKHDGSDKLCQSGVARCTWCGTWKGDKV 121

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCRT RYCSEKHQA HWRTGHKTDCQRMCMSSQLSSS+LT++H ETDIEKVSSKHLWP
Sbjct: 122 CSKCRTARYCSEKHQATHWRTGHKTDCQRMCMSSQLSSSKLTNNHHETDIEKVSSKHLWP 181

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEIS DNSY NALV KDRMDDSMKSLLA FEGDDDRKSWASFQ R+S
Sbjct: 182 EFEIMHEYESEFDIEISQDNSYVNALVCKDRMDDSMKSLLAKFEGDDDRKSWASFQARIS 241

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWP SSGLPS+ADIPKC+YC  PMCYEFQILPQLLYYFGVKND
Sbjct: 242 KAPEQVLRYCRDVGSKPLWPTSSGLPSEADIPKCNYCSGPMCYEFQILPQLLYYFGVKND 301

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSV-HQ 345
           VDSLDWATIVVYTCEASCESS+AYKEEFAWVQLS PS  HQ
Sbjct: 302 VDSLDWATIVVYTCEASCESSVAYKEEFAWVQLSVPSAGHQ 342

[Close]

BLAST of HG10007398 vs. ExPASy Swiss-Prot
Match: P47816 (Programmed cell death protein 2 OS=Rattus norvegicus OX=10116 GN=Pdcd2 PE=2 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-51
Identity = 119/338 (35.21%), Postives = 164/338 (48.52%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWL    LP   +  C  CG PL FLLQ+YAP+  +D  FHR+LF+F C    C      
Sbjct: 36  AWLALAELPGPGALACARCGRPLAFLLQVYAPLPGRDEAFHRSLFLFCCREPLC------ 95

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDG-SDIAC-----EYGVARCNWCGT 124
                        ++VFR QLPR N FY  EPP   G SD  C     + G   C  CG 
Sbjct: 96  ----------CAGLRVFRNQLPRKNAFYSYEPPSETGASDTECVCLQLKSGAHLCRVCGC 155

Query: 125 WKGDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVS 184
                 CS+C+   YCS++HQ + W+ GHK  C +   S  L    +   H+        
Sbjct: 156 -LAPMTCSRCKQAHYCSKEHQTLDWQLGHKQACTQ---SDHL--DHMVPDHN-------- 215

Query: 185 SKHLWPEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWAS 244
              L+PEFEI+ E E E   E+     Y+  + S + + +     +A  E  +D   +  
Sbjct: 216 --FLFPEFEIVTETEDEIGPEVVEMEDYSEVIGSMEGVPEEELDSMAKHESKEDH-IFQK 275

Query: 245 FQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYY 304
           F+ +++  PEQ+LRY R  G KP+W     +P + DIP CS C +   +EFQ++PQLL +
Sbjct: 276 FKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCS-CGAKRIFEFQVMPQLLNH 335

Query: 305 FGVKNDVDSLDWATIVVYTCEASCESSIAYKEEFAWVQ 337
                   S+DW  + V+TC  SC   I Y EEF W Q
Sbjct: 336 LKADRLGTSVDWGILAVFTCAESCSLGIGYTEEFVWKQ 337

[Close]

BLAST of HG10007398 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.6e-50
Identity = 116/341 (34.02%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWL    LP      C +CG P+ FLLQ+YAP+  +   FHR LF+F C +  C      
Sbjct: 36  AWLSAAGLPGPPELACPLCGRPMAFLLQVYAPLPGRADAFHRCLFLFCCRTPPCCC---- 95

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSD-------IACEYGVARCNWCG 124
                        ++VFR QLPR N FY  EPP  D          +  + G   C  CG
Sbjct: 96  ------------GLRVFRNQLPRQNDFYSYEPPSEDPPSETGESVYLHLKSGAHLCRVCG 155

Query: 125 TWKGDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKV 184
              G K CS+C    YCS++HQ++ WR GHK  C +            TD     +++ +
Sbjct: 156 C-SGPKRCSRCHKAHYCSKEHQSLDWRLGHKQACAQ------------TD-----NLDNI 215

Query: 185 SSKH--LWPEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKS 244
              H  L+PEFEI+ E E E   E+   +  +  + +     +     +A  E  +DR  
Sbjct: 216 VPDHNFLFPEFEIVIETEDEIMPEVVERDDESEIIGTMGEAHEEELESMAKHESKEDR-I 275

Query: 245 WASFQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQL 304
           +  F+ ++S  PEQ+LRY R  G  PLW      P + DIP C  C +   +EFQ++PQL
Sbjct: 276 FRKFKTKISLEPEQILRYGR--GIAPLWISGENTPKEKDIPDCP-CGAKRLFEFQVMPQL 335

Query: 305 LYYFGVKNDVDSLDWATIVVYTCEASCESSIAYKEEFAWVQ 337
           L Y        S+DW  + ++TC  SC+  I Y EEF W Q
Sbjct: 336 LNYLKADRLGRSVDWGVLAIFTCAESCKLGIGYTEEFVWKQ 338

[Close]

BLAST of HG10007398 vs. ExPASy Swiss-Prot
Match: Q16342 (Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-49
Identity = 115/339 (33.92%), Postives = 158/339 (46.61%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWL    LP  ++  C++CG PL FLLQ+YAP+  +   FHR +F+F C    C      
Sbjct: 36  AWLGAAGLPGPQALACELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC------ 95

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHD-----GSDIACEY--GVARCNWCG 124
                        ++VFR QLPR N FY  EPP  +     G  +  +   G   C  CG
Sbjct: 96  ----------CAGLRVFRNQLPRKNDFYSYEPPSENPPPETGESVCLQLKSGAHLCRVCG 155

Query: 125 TWKGDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKV 184
              G K CS+C    YCS++HQ + WR GHK  C +               H +  I   
Sbjct: 156 C-LGPKTCSRCHKAYYCSKEHQTLDWRLGHKQACAQ-------------PDHLDHIIP-- 215

Query: 185 SSKHLWPEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWA 244
               L+PEFEI+ E E E   E+     Y+  + S     +     +A  E  +D K + 
Sbjct: 216 DHNFLFPEFEIVIETEDEIMPEVVEKEDYSEIIGSMGEALEEELDSMAKHESRED-KIFQ 275

Query: 245 SFQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLY 304
            F+ +++  PEQ+LRY R  G  P+W     +P + DIP C  C +    EFQ++PQLL 
Sbjct: 276 KFKTQIALEPEQILRYGR--GIAPIWISGENIPQEKDIPDCP-CGAKRILEFQVMPQLLN 335

Query: 305 YFGVKNDVDSLDWATIVVYTCEASCESSIAYKEEFAWVQ 337
           Y        S+DW  + V+TC  SC     Y EEF W Q
Sbjct: 336 YLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQ 338

[Close]

BLAST of HG10007398 vs. ExPASy Swiss-Prot
Match: P46718 (Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-49
Identity = 114/338 (33.73%), Postives = 158/338 (46.75%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWL    LP   +  C  CG PL FLLQ+YAP+  +D  FHR+LF+F C    C      
Sbjct: 36  AWLGLAELPGPGALACARCGRPLAFLLQVYAPLPGRDDAFHRSLFLFCCREPLC------ 95

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHD---GSDIAC---EYGVARCNWCGT 124
                        ++VFR QLPR+N FY  EPP      G++  C   + G   C  CG 
Sbjct: 96  ----------CAGLRVFRNQLPRNNAFYSYEPPSETEALGTECVCLQLKSGAHLCRVCGC 155

Query: 125 WKGDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVS 184
                 CS+C+   YCS++HQ + WR GHK  C +                 + D     
Sbjct: 156 -LAPMTCSRCKQAHYCSKEHQTLDWRLGHKQACTQ---------------SDKIDHMVPD 215

Query: 185 SKHLWPEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWAS 244
              L+PEFEI+ E E E   E+     Y+    S   + +     +A  E  +D   +  
Sbjct: 216 HNFLFPEFEIVTETEDEILPEVVEMEDYSEVTGSMGGIPEEELDSMAKHESKEDH-IFQK 275

Query: 245 FQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYY 304
           F+ +++  PEQ+LRY R  G KP+W     +P + DIP C  C +   +EFQ++PQLL +
Sbjct: 276 FKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCP-CGAKRIFEFQVMPQLLNH 335

Query: 305 FGVKNDVDSLDWATIVVYTCEASCESSIAYKEEFAWVQ 337
                   S+DW  + V+TC  SC     Y EEF W Q
Sbjct: 336 LKADRLGRSIDWGVLAVFTCAESCSLGSGYTEEFVWKQ 337

[Close]

BLAST of HG10007398 vs. ExPASy Swiss-Prot
Match: Q5ZID2 (Programmed cell death protein 2-like OS=Gallus gallus OX=9031 GN=PDCD2L PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.0e-13
Identity = 87/341 (25.51%), Postives = 128/341 (37.54%), Query Frame = 0


Query: 20  CDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQHEQWKSKSEKSSRSVK 79
           C  CG  L  L+Q+Y P+    S FHR   VF C    C  R Q   WK    +S  +  
Sbjct: 52  CGACGAALAHLVQVYCPL--GASPFHRLANVFACAESACWGRPQ--SWKVLRSQSLEA-- 111

Query: 80  VFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCG---TWKGDKVCSKCRTVRYCSE 139
             RGQ                GS    E   +  +WC     W G               
Sbjct: 112 --RGQ-----------DALGCGSKQKEECNFSAKDWCAEADDWGGCDGTESSTCALQMLG 171

Query: 140 KHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWPEFEIMHEY---- 199
            +  +      +  C        LS +        TD+       +     + H Y    
Sbjct: 172 LNAGMSSSASEEAQCVSQLQELHLSEAADVSGSLNTDLLLREEMVMATSAPVFHSYYISV 231

Query: 200 ESEFDIEISHDNSYANALVS--KDRMDDSMKSLLA-NFEGDDDRKSWA------------ 259
             E D     D  +AN L+   + R    ++ L++ +F G+D  + +             
Sbjct: 232 VDEADYAGFLDTDHANKLLKEYQQREGVDLEHLMSESFAGEDSNEKYEKTKVRSGDHTFH 291

Query: 260 SFQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLY 319
            F  R+S  PEQ+LRY    G +PL+           IP CS C S   +EFQ++P L+ 
Sbjct: 292 KFMKRISVCPEQILRY--SWGGQPLFITCPPANFDNSIPACSNCGSNRVFEFQLMPALVS 351

Query: 320 YFGVKNDVDSLDWATIVVYTCEASC--ESSIAYKEEFAWVQ 337
                 D+ S+++ T++VYTCE SC   +     EEF +VQ
Sbjct: 352 MLWGDADL-SVEFGTVIVYTCERSCWPTNQQTPLEEFIFVQ 370

[Close]

BLAST of HG10007398 vs. ExPASy TrEMBL
Match: A0A1S3BRT5 (programmed cell death protein 2 OS=Cucumis melo OX=3656 GN=LOC103492470 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 6.5e-188
Identity = 311/341 (91.20%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSC+CDICGEPLQFL+QIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 72  AWLDPVNLPSGRSCLCDICGEPLQFLIQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 131

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFR QLP +NPFY SEPPKHDGSD  C+ GVARC WCGTWKGDKV
Sbjct: 132 EQWKSKSEKSSRSVKVFRSQLPHNNPFYSSEPPKHDGSDKLCQSGVARCTWCGTWKGDKV 191

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCRTVRYCSEKHQA HWRTGHKTDCQRMCMSSQLSSS+LT++H ETDIEKVSSKHLWP
Sbjct: 192 CSKCRTVRYCSEKHQATHWRTGHKTDCQRMCMSSQLSSSKLTNNHHETDIEKVSSKHLWP 251

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEIS DNSYANALV KDRMDDSMKSLLA FEGDDDRKSWASFQ R+S
Sbjct: 252 EFEIMHEYESEFDIEISQDNSYANALVCKDRMDDSMKSLLAKFEGDDDRKSWASFQARIS 311

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWP SSGLPS+ADIPKC+YC  PMCYEFQILPQLLYYFGVKND
Sbjct: 312 KAPEQVLRYCRDVGSKPLWPTSSGLPSEADIPKCNYCSGPMCYEFQILPQLLYYFGVKND 371

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSV-HQ 345
           VDSLDWATIVVYTCEASCESS+AYKEEFAWVQLS PS  HQ
Sbjct: 372 VDSLDWATIVVYTCEASCESSVAYKEEFAWVQLSVPSAGHQ 412

[Close]

BLAST of HG10007398 vs. ExPASy TrEMBL
Match: A0A5D3CHQ5 (Programmed cell death protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00320 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.4e-187
Identity = 310/341 (90.91%), Postives = 321/341 (94.13%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSC+CDICGEPLQFL+QIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 2   AWLDPVNLPSGRSCLCDICGEPLQFLIQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 61

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFR QLPR+NPFY SEPPKHDGSD  C+ GVARC WCGTWKGDKV
Sbjct: 62  EQWKSKSEKSSRSVKVFRSQLPRNNPFYSSEPPKHDGSDKLCQSGVARCTWCGTWKGDKV 121

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCRT RYCSEKHQA HWRTGHKTDCQRMCMSSQLSSS+LT++H ETDIEKVSSKHLWP
Sbjct: 122 CSKCRTARYCSEKHQATHWRTGHKTDCQRMCMSSQLSSSKLTNNHHETDIEKVSSKHLWP 181

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEIS DNSY NALV KDRMDDSMKSLLA FEGDDDRKSWASFQ R+S
Sbjct: 182 EFEIMHEYESEFDIEISQDNSYVNALVCKDRMDDSMKSLLAKFEGDDDRKSWASFQARIS 241

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWP SSGLPS+ADIPKC+YC  PMCYEFQILPQLLYYFGVKND
Sbjct: 242 KAPEQVLRYCRDVGSKPLWPTSSGLPSEADIPKCNYCSGPMCYEFQILPQLLYYFGVKND 301

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSV-HQ 345
           VDSLDWATIVVYTCEASCESS+AYKEEFAWVQLS PS  HQ
Sbjct: 302 VDSLDWATIVVYTCEASCESSVAYKEEFAWVQLSVPSAGHQ 342

[Close]

BLAST of HG10007398 vs. ExPASy TrEMBL
Match: A0A0A0LZV6 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G601510 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.5e-187
Identity = 311/341 (91.20%), Postives = 320/341 (93.84%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSC+CDICGEPLQFL+QIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 79  AWLDPVNLPSGRSCLCDICGEPLQFLIQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 138

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFRGQLPR+NPFY SEPPKHDGSD  C+ GVARC WCGTWKGDKV
Sbjct: 139 EQWKSKSEKSSRSVKVFRGQLPRNNPFYSSEPPKHDGSDKLCQSGVARCTWCGTWKGDKV 198

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCRTVRYCSEKHQA HWRTGHKTDCQRMCMSSQLSSS LT++H ETD EKVSSKHLWP
Sbjct: 199 CSKCRTVRYCSEKHQATHWRTGHKTDCQRMCMSSQLSSSSLTNNHHETDNEKVSSKHLWP 258

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EFEIMHEYESEFDIEIS DNSYANALV KDRMDDSMKSLLA FEGDDDRKSWASFQ R+S
Sbjct: 259 EFEIMHEYESEFDIEISQDNSYANALVCKDRMDDSMKSLLAKFEGDDDRKSWASFQARIS 318

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRDVGSKPLWP SSGLPSKADIPKC+YC  PMCYEFQILPQLLYYFGVKND
Sbjct: 319 KAPEQVLRYCRDVGSKPLWPTSSGLPSKADIPKCNYCGGPMCYEFQILPQLLYYFGVKND 378

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPSV-HQ 345
           VDSLDWATIVVY CEASCES+IAY EEFAWVQLS PS  HQ
Sbjct: 379 VDSLDWATIVVYACEASCESNIAYNEEFAWVQLSVPSAGHQ 419

[Close]

BLAST of HG10007398 vs. ExPASy TrEMBL
Match: A0A6J1HBV3 (programmed cell death protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111461855 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 302/337 (89.61%), Postives = 312/337 (92.58%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 81  AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 140

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWKSKSEKSSRSVKVFRGQLPRSNPFY SE PKHDG+D  C  GVA C+WCGTWKGDKV
Sbjct: 141 EQWKSKSEKSSRSVKVFRGQLPRSNPFYSSEAPKHDGTDKPCASGVAPCSWCGTWKGDKV 200

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCR VRYCSE+HQAIHWRTGHKTDCQRMC+SSQLSSS    S  ETD EKVS KHLWP
Sbjct: 201 CSKCRKVRYCSEQHQAIHWRTGHKTDCQRMCISSQLSSSGQIYSQYETDTEKVSKKHLWP 260

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EF I+HEYESEF++E S D+S+ANALV +DRMDDSMKSLLANFEGDDDRKSWASFQ RLS
Sbjct: 261 EFGIIHEYESEFNMETSQDDSHANALVRRDRMDDSMKSLLANFEGDDDRKSWASFQVRLS 320

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRD GSKPLWPMSSG PSKADIPKCSYC  PMCYEFQILPQLLYYFGVKND
Sbjct: 321 KAPEQVLRYCRDDGSKPLWPMSSGRPSKADIPKCSYCSGPMCYEFQILPQLLYYFGVKND 380

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS 342
           VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS
Sbjct: 381 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS 417

[Close]

BLAST of HG10007398 vs. ExPASy TrEMBL
Match: A0A6J1JC77 (programmed cell death protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111485465 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 4.7e-178
Identity = 298/337 (88.43%), Postives = 312/337 (92.58%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH
Sbjct: 81  AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 140

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWK KSEKSSRSVKVFRGQLPRSNPFY  E PKHDG+D  C  GVA C+WCGTWKGDKV
Sbjct: 141 EQWKRKSEKSSRSVKVFRGQLPRSNPFYSREAPKHDGTDKPCASGVAPCSWCGTWKGDKV 200

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWP 184
           CSKCR VRYCSEKHQAIHWRTGHKTDCQRMC+SSQLSSS   +S  ETDIEKVS KHLWP
Sbjct: 201 CSKCRKVRYCSEKHQAIHWRTGHKTDCQRMCISSQLSSSGQINSQYETDIEKVSKKHLWP 260

Query: 185 EFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRLS 244
           EF I+HEYESEF++E S D+S+A++LV +DRMDDSMKSLLANFEGDDDRKSWASFQ RLS
Sbjct: 261 EFGIIHEYESEFNMETSQDDSHASSLVCRDRMDDSMKSLLANFEGDDDRKSWASFQVRLS 320

Query: 245 KAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKND 304
           KAPEQVLRYCRD GSKPLWPMSSG PSKADIPKC++C  PMCYEFQILPQLLYYFGVKND
Sbjct: 321 KAPEQVLRYCRDDGSKPLWPMSSGRPSKADIPKCNHCSGPMCYEFQILPQLLYYFGVKND 380

Query: 305 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS 342
           VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS
Sbjct: 381 VDSLDWATIVVYTCEASCESSIAYKEEFAWVQLSTPS 417

[Close]

BLAST of HG10007398 vs. TAIR 10
Match: AT4G02220.1 (zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein )

HSP 1 Score: 463.4 bits (1191), Expect = 1.6e-130
Identity = 207/334 (61.98%), Postives = 264/334 (79.04%), Query Frame = 0


Query: 5   AWLDPVNLPSGRSCVCDICGEPLQFLLQIYAPIVEKDSTFHRTLFVFMCPSMTCLLRDQH 64
           AWLDPVNLPSG+S +CD+C EP+QF+LQ+YAP+ +K+S FHRTLF+FMCPSM+CLLRDQH
Sbjct: 80  AWLDPVNLPSGKSILCDLCEEPMQFVLQLYAPLTDKESAFHRTLFLFMCPSMSCLLRDQH 139

Query: 65  EQWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKV 124
           EQWK   EK+ RS KVFR QLPR+NPFY SE PKHDG+D    +G   C WCGTWKGDK+
Sbjct: 140 EQWKRAPEKAMRSTKVFRCQLPRANPFYSSEAPKHDGTDKPLGHGAPLCTWCGTWKGDKL 199

Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLS-SSRLTDSHSETDIEKVSSKHLW 184
           CS C+  RYCS KHQA+HWR GHKT+CQ++   S+ S S  + +  + T+ +KV+SK LW
Sbjct: 200 CSGCKNARYCSPKHQALHWRLGHKTECQQLRTVSETSDSGPVNNGVAPTEKQKVASKSLW 259

Query: 185 PEFEIMHEYESEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGDDDRKSWASFQGRL 244
            EF +++E ESE+D E+S D+  A  LVSK  +DD MKSL+ +FEGD D+K+W +FQ R+
Sbjct: 260 KEFVLINEDESEYDTEMSGDDEVAKPLVSKREVDDQMKSLMNDFEGDADKKNWVNFQQRV 319

Query: 245 SKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYFGVKN 304
            KAPEQVLRY R  G+KPLWP++SG  SK+++P C  C  P C+EFQ++PQLL++FG KN
Sbjct: 320 DKAPEQVLRYSRSSGAKPLWPIASGRVSKSELPSCKSCGGPRCFEFQVMPQLLFFFGGKN 379

Query: 305 DVDSLDWATIVVYTCEASCESSIAYKEEFAWVQL 338
           + +SLDWATIVVYTCE SC+SS++YKEEF WVQL
Sbjct: 380 ERESLDWATIVVYTCENSCDSSLSYKEEFVWVQL 413

[Close]

BLAST of HG10007398 vs. TAIR 10
Match: AT5G64830.1 (programmed cell death 2 C-terminal domain-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.8e-12
Identity = 83/341 (24.34%), Postives = 133/341 (39.00%), Query Frame = 0


Query: 20  CDICGEPLQFLLQIYAPI-VEKDSTFHRTLFVFMCPSMTCLLRDQHEQWKSKS-----EK 79
           C  CG  L  + Q+YAPI  E      RTL++F C    C   +Q   W++ S      K
Sbjct: 48  CCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQ--SWRAFSIQKAIAK 107

Query: 80  SSRSVKVFRGQLPRSNPFYLSEPPKHDGSDIACEYGVARCNWCGTWKGDKVCSKCRTVRY 139
              S K+    LP + P    +  + DG D   +      ++    K     S       
Sbjct: 108 EKGSTKI--ADLPVAFP----KTHRLDGDDDDDDDDDEDFDFASLAKALAEASSAAASIT 167

Query: 140 CSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSKHLWPEFEIMHEYE 199
             +K +     +G+ +   +   S   S +R+ D         V   +++ + EI  +  
Sbjct: 168 KKQKSKP----SGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEV 227

Query: 200 SEFDIEISHDNSYANALVSKDRMDDSMKSLLANFEGD---DDRKSWASFQGRLSKAPEQV 259
             F    S  +       + D  +   K     +E D   +  +++  F+ RL   PEQ 
Sbjct: 228 DRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKFKKRLDANPEQC 287

Query: 260 LRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILPQLLYYF-------GVKN 319
            RY    G KP+              KC  CDS   +E Q++P L+Y+        G+K 
Sbjct: 288 FRYW--YGGKPI----LATEDMKSPDKCRNCDSQRHFEIQLMPPLIYFLHEGVVDKGIKQ 347

Query: 320 DVDSLDWATIVVYTCEASCESSI----AYKEEFAWVQLSTP 341
            +D+ DW T++VYTC  SC +++       EE   VQ   P
Sbjct: 348 SLDNWDWMTLIVYTCSKSCANAVNGDWVVTEECVAVQYEKP 370

[Close]

BLAST of HG10007398 vs. TAIR 10
Match: AT5G64830.2 (programmed cell death 2 C-terminal domain-containing protein )

HSP 1 Score: 66.2 bits (160), Expect = 5.7e-11
Identity = 38/118 (32.20%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 234 KSWASFQGRLSKAPEQVLRYCRDVGSKPLWPMSSGLPSKADIPKCSYCDSPMCYEFQILP 293
           +++  F+ RL   PEQ  RY    G KP+              KC  CDS   +E Q++P
Sbjct: 176 RTYLKFKKRLDANPEQCFRYW--YGGKPI----LATEDMKSPDKCRNCDSQRHFEIQLMP 235

Query: 294 QLLYYF-------GVKNDVDSLDWATIVVYTCEASCESSI----AYKEEFAWVQLSTP 341
            L+Y+        G+K  +D+ DW T++VYTC  SC +++       EE   VQ   P
Sbjct: 236 PLIYFLHEGVVDKGIKQSLDNWDWMTLIVYTCSKSCANAVNGDWVVTEECVAVQYEKP 287

[Close]

BLAST of HG10007398 vs. TAIR 10
Match: AT5G65450.1 (ubiquitin-specific protease 17 )

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-07
Identity = 38/153 (24.84%), Postives = 70/153 (45.75%), Query Frame = 0


Query: 66  QWKSKSEKSSRSVKVFRGQLPRSNPFYLSEPPK-----HDGSDIACEYGVARCNWCGTWK 125
           QW+S S +    +++       S   YL+E  +     + G  ++  Y  A C +  T +
Sbjct: 11  QWRSASVRREEVIRLIALATEES---YLAEEVRPATVDYGGDSVSDVYRCAVCLYPTTTR 70

Query: 126 GDKVCSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETDIEKVSSK 185
               CS+C++VRYCS K Q +HWR GHK +C+      +       + + ++D +   S 
Sbjct: 71  ----CSQCKSVRYCSSKCQILHWRRGHKEECRSPDYDEE------KEEYVQSDYDAKESN 130

Query: 186 HLWPEFEIMHEYESEFDIEISHDNSYANALVSK 214
             +P     +E  S   ++++ D S +   + K
Sbjct: 131 VDFPSRGTAYESSSNVSVDVACDMSTSRPSIHK 150

[Close]

BLAST of HG10007398 vs. TAIR 10
Match: AT4G24560.1 (ubiquitin-specific protease 16 )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 23/49 (46.94%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 125 CSKCRTVRYCSEKHQAIHWRTGHKTDCQRMCMSSQLSSSRLTDSHSETD 174
           CS+C+ VRYCS K Q IHWR GHK +C          +S + DS  E+D
Sbjct: 85  CSRCKAVRYCSGKCQIIHWRQGHKDECH--------PASIVYDSEDESD 125

The following BLAST results are available for this feature:

BLAST of HG10007398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879360.1	3.3e-194	95.01	programmed cell death protein 2 isoform X3 [Benincasa hispida]	[more]
XP_038879358.1	1.8e-192	94.44	programmed cell death protein 2 isoform X2 [Benincasa hispida]	[more]
XP_038879357.1	1.6e-188	85.49	programmed cell death protein 2 isoform X1 [Benincasa hispida]	[more]
XP_008451091.1	1.3e-187	91.20	PREDICTED: programmed cell death protein 2 [Cucumis melo]	[more]
KAA0055661.1	3.0e-187	90.91	programmed cell death protein 2 [Cucumis melo var. makuwa] >TYK09916.1 programme...	[more]

BLAST of HG10007398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P47816	1.4e-51	35.21	Programmed cell death protein 2 OS=Rattus norvegicus OX=10116 GN=Pdcd2 PE=2 SV=2	[more]
Q2YDC9	3.6e-50	34.02	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q16342	1.8e-49	33.92	Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2	[more]
P46718	2.3e-49	33.73	Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2	[more]
Q5ZID2	6.0e-13	25.51	Programmed cell death protein 2-like OS=Gallus gallus OX=9031 GN=PDCD2L PE=2 SV=...	[more]

BLAST of HG10007398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRT5	6.5e-188	91.20	programmed cell death protein 2 OS=Cucumis melo OX=3656 GN=LOC103492470 PE=4 SV=...	[more]
A0A5D3CHQ5	1.4e-187	90.91	Programmed cell death protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LZV6	5.5e-187	91.20	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G601510 P...	[more]
A0A6J1HBV3	1.4e-179	89.61	programmed cell death protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111461855 PE...	[more]
A0A6J1JC77	4.7e-178	88.43	programmed cell death protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111485465 PE=4...	[more]

BLAST of HG10007398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02220.1	1.6e-130	61.98	zinc finger (MYND type) family protein / programmed cell death 2 C-terminal doma...	[more]
AT5G64830.1	6.8e-12	24.34	programmed cell death 2 C-terminal domain-containing protein	[more]
AT5G64830.2	5.7e-11	32.20	programmed cell death 2 C-terminal domain-containing protein	[more]
AT5G65450.1	2.9e-07	24.84	ubiquitin-specific protease 17	[more]
AT4G24560.1	2.1e-05	46.94	ubiquitin-specific protease 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 107..158 e-value: 5.4E-9 score: 37.6
None	No IPR available	PANTHER	PTHR12298	PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED	coord: 5..341
None	No IPR available	PANTHER	PTHR12298:SF6	SUBFAMILY NOT NAMED	coord: 5..341
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 108..154
IPR007320	Programmed cell death protein 2, C-terminal	PFAM	PF04194	PDCD2_C	coord: 183..336 e-value: 1.1E-37 score: 129.7
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 113..151 e-value: 2.4E-8 score: 33.9
IPR002893	Zinc finger, MYND-type	PROSITE	PS01360	ZF_MYND_1	coord: 113..151
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 113..151 score: 11.65452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007398.1	HG10007398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding