HG10007159 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTGATCAAGACACAGAAGAGGTATCTCTAATTCCTACATGAGAAATTAAAATTTAAAATAATAATAATAATAATAATAATAATAATAAAATCAAACCTAAGCCTATTTGGAAGGGATGAGAAAGAAGAAAAAAAAAATCAATATATAATACAATTTTCTGTCAATTGAATTATGTTATTGTTTACAAATTGTTATTATTTAGATCTTGAAGAAATTTCAATTTCAATTTTTTTTTTTTTTTTATTATGTTCTTAAGGATTTTCCAGAATGGCTTTAAACATTTTCATTCATTATAATAACATATTGTAAAATTGAAAAATACTAATTAAAAAATGAATTTATTATTGTTTACAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGAGGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAACTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATTACAGGTGAGATTTATTTATTTATTTATTTATTTTTAAATAGTATTGCACATTAATTCGCAATCAATTTGTTTTAGGTTTAAATCTTAAATTTTGGTTCACTATAATATGTATTCATTTTATCTGTCATTCTGTTTTTATGGTTTCAATTGATTTTTTTTTCTTTTTGGAATGTTTTTAATCTGTAGTTTGATGTCGTGATTGCTTCGAATGACTAAATTATATTTATATTTGTGTTATTTACGGTTTTGGTCCTAATTAAGATTTAGAGGAATAAACTATATAAATTAACTCTATTTGTCGGATCATTTTTTTTTAATAATTTAGTGAATTACGTAAATCTATATATTGATTTCTTTCAAAAAAAAATTTTTTTTTTCTATGATTATCGTTTTTTTAAGAATTTTCATTGCAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAGGACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAAGTAATTATTGCATTATGTTTATTGTATATAAATCCTAAATTTTAATTATGAGTTAACCATAGTCTATTTTAATACATGTTTCTTTTTAAAAAATAAATAAATAAATAAATTATACAGCATTTCGTGAAAGATTTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTCACTCTAAGGTGTGTTTTAATCTTTGGTTTGTTAAGCTTATTTCCAGCATAATTAGGGTTAAAAGTATTATATATATAGGGAATTTTTAAAAATAGAAAAATAAGAAAAATTATCTACACAAAATAGCAAAAATTTTAGATAGTTGCGATAGAAATCTATCAGTGATAGAAATGATAAAAGTCTATCACTGATAGATACGGATAGAATTCTATCACAATATTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTCTATGTGTGAAAATTTCTTTATATATATATATATATATGTTTATTTATTTATTTATTTATTTATTGGGCTTTACCTCAGAGTGCTTAAATTTAAGAACGAGCGCATTTCTACCACTCCGGTTAATGAAAGAGAAATGGATCAGTTCATAAATGAATTTGATTTTCGTAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGGTGAGTAAAACATATGAGCCTTTCAAAATGTTTGTTGTAATTTATGGATGAAAATCAAATTTTTAAAAGAAAATAATATAATAAAATGATTATAGGTTACGTTTGATAACCATTTAGGTCTCATTTGGTAATTATTTGATTTTTGTTAGTTTTTTAAAATTAAGCCTATAAACACACGTTACATCCTAAATTTCTTGTTTAGTCATCAACTTCTTACCAATGTTTTCAAAAACCAAGCCAAAATTTGAAAACTACTCAAAACGGTAGTTTTTAAGATTTTGTTTTTGTTTTTGGAATTTGACTAAGAATTTAACTATTGCATTAATTGAAAGATGTAAATCATGGTAAGAAATTGATAGGAAATACGATTAATATAATTTTTAAAAACAAAAAACAAAAAACTAAATTAAATTGTCCTCAAACGAGTTTAGATTTTTGTTTTTAGTTTTCAAAATTTTACTTGTTTTCTTATGCTTACCATTTTCAAGTCAACAAAATATTTGAATTTTTAGCCAAATACCACAAATAAAAATAATTTTTTTTTAAATTTCCAAAAGCTTATTTTTGTTTCCTGAATTTGAAAACCATTCATTTGATTATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTTTTGGATCAACTTCCTCTTTGGTCTCTATGTCTCAAAATGTTACAGATTTAGTTCTCAAGTTTTGAGTTTTATTTCAATTTAACCCCTAGATTTAATAATTTACACTTTTAACCTCGCTTTTTCACTAAATACTCATTTTCCGTCTTTAGTGTTAATATACGTTAATAAATTTAAAAGAATTATAATTAATTAAGTTTAACTATTTTTCATCACTTTTAAAAATTAAATTTAAAATTTTTCATTTTAATTATATTAAACTAATTAAGAGATATTGACGTCAATGACTGAGAGTGGGTATATATATATAATGAAAATTTGATGTTAATTAAAATATAAAATATTGAAACCTAGATATCAAGTTGAAACAAAACTCAAATCTAAATGGTAAAATTGCAACATTGTAAAACTTAGGGACTAAATCGAAACAAACTCAAAACTTGAGAACTAAATGTATAACTTTTTAAAACTTAGGGACCATATAGAAATAAGCTAAATTCAAAACATAAGAATCAAAAATGTATTTTTTTTTCCTATATTTATTTATCTATATATTGTTAATTTCATTGCAGTTGGTGAACCACCTCTTAAGGGAGTTTGGAATGTTATATTTTGGGGGAAGGTTGCCATTTGACATGGATGAGGATGAGGAGAAAGTACTCATCCTAATGGGTCTCCTATCATTTTCAATACAAGATGTTAAGGTATAA ATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGAGGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAACTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATTACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAGGACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGATTTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTCACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGTTGGTGAACCACCTCTTAAGGGAGTTTGGAATGTTATATTTTGGGGGAAGGTTGCCATTTGACATGGATGAGGATGAGGAGAAAGTACTCATCCTAATGGGTCTCCTATCATTTTCAATACAAGATGTTAAGGTATAA ATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGAGGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAACTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATTACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAGGACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGATTTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTCACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGTTGGTGAACCACCTCTTAAGGGAGTTTGGAATGTTATATTTTGGGGGAAGGTTGCCATTTGACATGGATGAGGATGAGGAGAAAGTACTCATCCTAATGGGTCTCCTATCATTTTCAATACAAGATGTTAAGGTATAA MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVKV Homology
BLAST of HG10007159 vs. NCBI nr
Match: TYK28170.1 (hypothetical protein E5676_scaffold289G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28 Identity = 83/150 (55.33%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of HG10007159 vs. NCBI nr
Match: XP_028085296.1 (uncharacterized protein LOC114286341 isoform X2 [Camellia sinensis]) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-07 Identity = 55/204 (26.96%), Postives = 86/204 (42.16%), Query Frame = 0
BLAST of HG10007159 vs. NCBI nr
Match: THG07144.1 (hypothetical protein TEA_019244 [Camellia sinensis var. sinensis]) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-07 Identity = 55/204 (26.96%), Postives = 86/204 (42.16%), Query Frame = 0
BLAST of HG10007159 vs. NCBI nr
Match: XP_028085295.1 (uncharacterized protein LOC114286341 isoform X1 [Camellia sinensis]) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-07 Identity = 55/204 (26.96%), Postives = 86/204 (42.16%), Query Frame = 0
BLAST of HG10007159 vs. NCBI nr
Match: XP_021686512.1 (RNA cytidine acetyltransferase 2-like [Hevea brasiliensis]) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-06 Identity = 46/173 (26.59%), Postives = 80/173 (46.24%), Query Frame = 0
BLAST of HG10007159 vs. ExPASy TrEMBL
Match: A0A5D3DY49 (tRNA_bind_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00850 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 5.2e-29 Identity = 83/150 (55.33%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of HG10007159 vs. ExPASy TrEMBL
Match: A0A4S4DVT3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_019244 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07 Identity = 55/204 (26.96%), Postives = 86/204 (42.16%), Query Frame = 0
BLAST of HG10007159 vs. ExPASy TrEMBL
Match: T2M5R0 (N-acetyltransferase 10 (Fragment) OS=Hydra vulgaris OX=6087 GN=NAT10 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.8e-06 Identity = 49/186 (26.34%), Postives = 85/186 (45.70%), Query Frame = 0
BLAST of HG10007159 vs. ExPASy TrEMBL
Match: A0A4P1RUC4 (RNA cytidine acetyltransferase OS=Lupinus angustifolius OX=3871 GN=TanjilG_31313 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05 Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 0
BLAST of HG10007159 vs. ExPASy TrEMBL
Match: A0A6P5U3W4 (RNA cytidine acetyltransferase OS=Prunus avium OX=42229 GN=LOC110773798 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05 Identity = 50/199 (25.13%), Postives = 86/199 (43.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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