HG10007143 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007143
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	vesicle-associated protein 2-2-like
Location	Chr10: 1737031 .. 1737452 (+)
RNA-Seq Expression	HG10007143
Synteny	HG10007143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGGTAAATTTTTTTGGCAGCTTTGTATTTTTTTTATTTGTTGTTCTCAAATTTATATCATAACTTAACCATTTTTTCTTCAGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATTGTAAACTCTTGA

mRNA sequence

ATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATTGTAAACTCTTGA

Coding sequence (CDS)

ATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATTGTAAACTCTTGA

Protein sequence

MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINILLFIYIVNS

Homology

[Close]

BLAST of HG10007143 vs. NCBI nr
Match: XP_038878617.1 (LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida])

HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29
Identity = 77/106 (72.64%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQK+APPDM CKDKFLIQSTIVPIETT EDI S  LFG++NSKNIEE+ L  ILV PS
Sbjct: 70  MQAQKMAPPDMKCKDKFLIQSTIVPIETTAEDITSTNLFGKDNSKNIEERILTTILVSPS 129

Query: 61  SSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
           SS T+EAL VGVS + S+DKQIEELKLKI +LD KLHE  ++I+ L
Sbjct: 130 SSLTVEALSVGVSNKSSSDKQIEELKLKINELDQKLHEAEIAISKL 175

[Close]

BLAST of HG10007143 vs. NCBI nr
Match: XP_031736065.1 (vesicle-associated protein 2-1-like [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25
Identity = 76/110 (69.09%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIIL 60
           MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ IL
Sbjct: 70  MQAQQMAPPDMKCKDKFLIQSTIVPIETNLHEDYVTSTYNLFEKNGSKNNIEERRLSTIL 129

Query: 61  VR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
           V+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KLHE  +SI+ L
Sbjct: 130 VKDESSSPTIETLNVGVSNQSKDKEIEELKLKITQLDQKLHEAEISISKL 179

[Close]

BLAST of HG10007143 vs. NCBI nr
Match: XP_008450732.1 (PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 8.1e-25
Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILV 60
           MQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV
Sbjct: 70  MQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGNKNNIEERKLSTILV 129

Query: 61  RPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
           + S +S TIEAL VGVS QS DKQIEELKLKITQLD KLHE  +SI+ L
Sbjct: 130 KASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISISKL 178

[Close]

BLAST of HG10007143 vs. NCBI nr
Match: XP_031736025.1 (vesicle-associated protein 1-3-like [Cucumis sativus] >KGN66550.2 hypothetical protein Csa_006961 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 73/108 (67.59%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILVR 60
           MQAQK+APPDM CKDKFLIQSTIVP E  L ED+ S   LF +N SKNIEE++L  ILV+
Sbjct: 70  MQAQKMAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVK 129

Query: 61  -PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
             S+SPTIE LRV VS QS D +IEELKLKIT+LD KLHE  +SI+ L
Sbjct: 130 AESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISISKL 177

[Close]

BLAST of HG10007143 vs. NCBI nr
Match: XP_023545322.1 (vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 62/105 (59.05%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQ +AP DM+CKDKFLIQST+VPIETT++DI S  +FG++ SKNIEE KL  I+V P+
Sbjct: 70  MQAQSVAPLDMVCKDKFLIQSTVVPIETTIDDITSTTMFGKSGSKNIEETKLNTIIVIPN 129

Query: 61  SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
             P  + + + V +QSND+Q+EELKLKIT+L++KLHE  ++I+ L
Sbjct: 130 VEPLRKEVAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKL 174

[Close]

BLAST of HG10007143 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-12
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS
Sbjct: 70  MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVPPS 129

Query: 61  SSPTIEAL 69
            SP +  +
Sbjct: 130 DSPELSPI 136

[Close]

BLAST of HG10007143 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS
Sbjct: 74  LQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYITPS 133

Query: 61  SS 63
           ++
Sbjct: 134 TT 134

[Close]

BLAST of HG10007143 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.8e-06
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V P 
Sbjct: 70  MQAQKEAPADLQCKDKFLLQCVVASPGATPKD-VTHEMFSKEAGHRVEETKLRVVYVAPP 129

Query: 61  SSPTIEALRVGVSEQSNDK 80
             P+   +R G  E S+ +
Sbjct: 130 RPPS--PVREGSEEGSSPR 145

[Close]

BLAST of HG10007143 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05
Identity = 26/64 (40.62%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ + P+
Sbjct: 72  MQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAE-MFNKEAGRVIEDFKLRVVYI-PA 131

Query: 61  SSPT 65
           + P+
Sbjct: 132 NPPS 133

[Close]

BLAST of HG10007143 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 26/64 (40.62%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQK AP DM CKDKFL+Q  I     T +++    +F +     +EE KL +  V P 
Sbjct: 87  MQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPE-MFSKEAGHRVEETKLRVTYVAPP 146

Query: 61  SSPT 65
             P+
Sbjct: 147 RPPS 149

[Close]

BLAST of HG10007143 vs. ExPASy TrEMBL
Match: A0A0A0LWK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.2e-27
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIIL 60
           MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ IL
Sbjct: 1   MQAQQMAPPDMKCKDKFLIQSTIVPIETNLHEDYVTSTYNLFEKNGSKNNIEERRLSTIL 60

Query: 61  VR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSIN 104
           V+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KLHEV LS N
Sbjct: 61  VKDESSSPTIETLNVGVSNQSKDKEIEELKLKITQLDQKLHEVSLSYN 108

[Close]

BLAST of HG10007143 vs. ExPASy TrEMBL
Match: A0A1S3BPU6 (vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.9e-25
Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILV 60
           MQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV
Sbjct: 70  MQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGNKNNIEERKLSTILV 129

Query: 61  RPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
           + S +S TIEAL VGVS QS DKQIEELKLKITQLD KLHE  +SI+ L
Sbjct: 130 KASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISISKL 178

[Close]

BLAST of HG10007143 vs. ExPASy TrEMBL
Match: A0A6J1HCB9 (vesicle-associated protein 2-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462044 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-24
Identity = 61/105 (58.10%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQ +AP DM+CKDKFLIQST+VP ETT++DI S  +FG++ SKNIEE KL  I+V P+
Sbjct: 70  MQAQSVAPLDMVCKDKFLIQSTVVPTETTVDDITSTTMFGKSGSKNIEETKLNTIIVIPN 129

Query: 61  SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
             P  + + + V +QSND+Q+EELKLKIT+L++KLHE  ++I+ L
Sbjct: 130 VEPLRKEVAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKL 174

[Close]

BLAST of HG10007143 vs. ExPASy TrEMBL
Match: A0A6J1HZ48 (vesicle-associated protein 2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467925 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 60/104 (57.69%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 2   QAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSS 61
           QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P+ 
Sbjct: 71  QAQSVAPLDMVCKDKFLIQSTVVPIETNVDDITSTTMFGKSGSKNIEETKLNTIIVSPNV 130

Query: 62  SPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINIL 106
            P  + + + V +QSND+Q+EELKLKIT+L++KLHE  ++I+ L
Sbjct: 131 EPLRKEMAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAISKL 174

[Close]

BLAST of HG10007143 vs. ExPASy TrEMBL
Match: A0A6J1DM49 (vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC111021835 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQ Q +APPDMICKDKFLI STIVP ETT+EDI S+ LFG++  K IE+KKL   LVR S
Sbjct: 70  MQGQGVAPPDMICKDKFLILSTIVPAETTVEDITSSNLFGEDERKYIEKKKLIPTLVRAS 129

Query: 61  S-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQLDLKLHE 98
           + SP  EAL      +GVS+  +  DK +E+LKL IT+L+LKLHE
Sbjct: 130 NYSPYYEALNNEVMALGVSDHPSNYDKYVEKLKLNITELELKLHE 174

[Close]

BLAST of HG10007143 vs. TAIR 10
Match: AT1G08820.1 (vamp/synaptobrevin-associated protein 27-2 )

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS
Sbjct: 70  MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVPPS 129

Query: 61  SSPTIEAL 69
            SP +  +
Sbjct: 130 DSPELSPI 136

[Close]

BLAST of HG10007143 vs. TAIR 10
Match: AT1G08820.2 (vamp/synaptobrevin-associated protein 27-2 )

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS
Sbjct: 70  MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS-MFSKAEGKHIEENKLRVTLVPPS 129

Query: 61  SSPTIEAL 69
            SP +  +
Sbjct: 130 DSPELSPI 136

[Close]

BLAST of HG10007143 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS
Sbjct: 74  LQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYITPS 133

Query: 61  SS 63
           ++
Sbjct: 134 TT 134

[Close]

BLAST of HG10007143 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS
Sbjct: 74  LQAQREYPPDMQCKDKFLLQSTIVPPHTDVDE-LPQDTFTKDSGKTLTECKLKVSYITPS 133

Query: 61  SS 63
           ++
Sbjct: 134 TT 134

[Close]

BLAST of HG10007143 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 51.2 bits (121), Expect = 6.3e-07
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 1   MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS 60
           MQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V P 
Sbjct: 70  MQAQKEAPADLQCKDKFLLQCVVASPGATPKD-VTHEMFSKEAGHRVEETKLRVVYVAPP 129

Query: 61  SSPTIEALRVGVSEQSNDK 80
             P+   +R G  E S+ +
Sbjct: 130 RPPS--PVREGSEEGSSPR 145

The following BLAST results are available for this feature:

BLAST of HG10007143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878617.1	3.2e-29	72.64	LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]	[more]
XP_031736065.1	2.1e-25	69.09	vesicle-associated protein 2-1-like [Cucumis sativus]	[more]
XP_008450732.1	8.1e-25	70.64	PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]	[more]
XP_031736025.1	1.4e-24	67.59	vesicle-associated protein 1-3-like [Cucumis sativus] >KGN66550.2 hypothetical p...	[more]
XP_023545322.1	1.4e-24	59.05	vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10007143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DHD7	6.3e-12	55.88	Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=...	[more]
Q9LVU1	6.1e-07	43.55	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
Q9SHC8	8.8e-06	36.71	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q84WW5	1.5e-05	40.63	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q8VZ95	4.4e-05	40.63	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]

BLAST of HG10007143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWK4	7.2e-27	71.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1	[more]
A0A1S3BPU6	3.9e-25	70.64	vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4...	[more]
A0A6J1HCB9	3.3e-24	58.10	vesicle-associated protein 2-2-like OS=Cucurbita moschata OX=3662 GN=LOC11146204...	[more]
A0A6J1HZ48	5.7e-24	57.69	vesicle-associated protein 2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467925 ...	[more]
A0A6J1DM49	3.8e-20	60.00	vesicle-associated protein 2-2-like OS=Momordica charantia OX=3673 GN=LOC1110218...	[more]

BLAST of HG10007143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08820.1	4.5e-13	55.88	vamp/synaptobrevin-associated protein 27-2	[more]
AT1G08820.2	4.5e-13	55.88	vamp/synaptobrevin-associated protein 27-2	[more]
AT5G47180.1	4.3e-08	43.55	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT5G47180.2	4.3e-08	43.55	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT2G45140.1	6.3e-07	36.71	plant VAP homolog 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 1..91 e-value: 5.5E-7 score: 31.5
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..66
None	No IPR available	PANTHER	PTHR10809:SF45	VESICLE-ASSOCIATED PROTEIN 2-2	coord: 1..66
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 2..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007143.1	HG10007143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane