HG10007132 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007132
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
LocationChr10: 1633304 .. 1633915 (+)
RNA-Seq ExpressionHG10007132
SyntenyHG10007132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTGTGTTTACGATGATGGACATTTCGACGATGAACGTTATCATCAAATCTTAGAAATTCGAAGACGTTTTATCCATTGTCTCATGTTTGAATTTCCTTCTCAAATCATCCATCAAACTGCACCATTTCCACTCGGCAATAATAATGTTGTTTTTCCTCTCCCTTTCTATCTTCTCTATGACCATGAATCAATTTCCTTCCCCATCTACATCGCCCAATTGCTTTCCTCTTGCAACATCGACTCCGACGTTTCCGAAATCATTGCTGGGGAAATCGCCCTCCTCGTCAACGAAGCCACCGACAAAAATCCAAATGAGAGTTTCCACATTGTTGCCGTTGTCGACTATGTCAAATACACCTGGATGGAACCATTATCGATCCCAACGCAGCAGCCGACGAGCAACATGGTGAGGATGGAGAAGTTGGAGGAGATTGGAGAAGACTTGGGAGATTGTTGTATTTGTTTGGAGAGATTTTGTTGTAATGAGGAGAAGGTGGTAAAGATCCCCAGTGGACATGTGTATCATGAATCATGTATTTTGAAGTGGTTGGACAATAGTCATTTTTGCCCTTTGTGTAGGAGGGCAATATTGCCACTTCAGGACTAA

mRNA sequence

ATGTATTGTGTTTACGATGATGGACATTTCGACGATGAACGTTATCATCAAATCTTAGAAATTCGAAGACGTTTTATCCATTGTCTCATGTTTGAATTTCCTTCTCAAATCATCCATCAAACTGCACCATTTCCACTCGGCAATAATAATGTTGTTTTTCCTCTCCCTTTCTATCTTCTCTATGACCATGAATCAATTTCCTTCCCCATCTACATCGCCCAATTGCTTTCCTCTTGCAACATCGACTCCGACGTTTCCGAAATCATTGCTGGGGAAATCGCCCTCCTCGTCAACGAAGCCACCGACAAAAATCCAAATGAGAGTTTCCACATTGTTGCCGTTGTCGACTATGTCAAATACACCTGGATGGAACCATTATCGATCCCAACGCAGCAGCCGACGAGCAACATGGTGAGGATGGAGAAGTTGGAGGAGATTGGAGAAGACTTGGGAGATTGTTGTATTTGTTTGGAGAGATTTTGTTGTAATGAGGAGAAGGTGGTAAAGATCCCCAGTGGACATGTGTATCATGAATCATGTATTTTGAAGTGGTTGGACAATAGTCATTTTTGCCCTTTGTGTAGGAGGGCAATATTGCCACTTCAGGACTAA

Coding sequence (CDS)

ATGTATTGTGTTTACGATGATGGACATTTCGACGATGAACGTTATCATCAAATCTTAGAAATTCGAAGACGTTTTATCCATTGTCTCATGTTTGAATTTCCTTCTCAAATCATCCATCAAACTGCACCATTTCCACTCGGCAATAATAATGTTGTTTTTCCTCTCCCTTTCTATCTTCTCTATGACCATGAATCAATTTCCTTCCCCATCTACATCGCCCAATTGCTTTCCTCTTGCAACATCGACTCCGACGTTTCCGAAATCATTGCTGGGGAAATCGCCCTCCTCGTCAACGAAGCCACCGACAAAAATCCAAATGAGAGTTTCCACATTGTTGCCGTTGTCGACTATGTCAAATACACCTGGATGGAACCATTATCGATCCCAACGCAGCAGCCGACGAGCAACATGGTGAGGATGGAGAAGTTGGAGGAGATTGGAGAAGACTTGGGAGATTGTTGTATTTGTTTGGAGAGATTTTGTTGTAATGAGGAGAAGGTGGTAAAGATCCCCAGTGGACATGTGTATCATGAATCATGTATTTTGAAGTGGTTGGACAATAGTCATTTTTGCCCTTTGTGTAGGAGGGCAATATTGCCACTTCAGGACTAA

Protein sequence

MYCVYDDGHFDDERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
Homology
BLAST of HG10007132 vs. NCBI nr
Match: KGN66555.2 (hypothetical protein Csa_007514 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 99/187 (52.94%), Postives = 125/187 (66.84%), Query Frame = 0

Query: 12  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPI 71
           + R+HQ+LEI+RR  H LMF FP QIIHQT P  L  +N  FPL F   + + E  SF  
Sbjct: 20  NHRFHQVLEIQRRISHSLMFNFPPQIIHQTLPILLDYDNNFFPLHFNFFHSYGEPSSFTF 79

Query: 72  YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSIPT 131
           Y+AQL SS NI+S  SE +A  I L+ N+  ++N N SFHI  ++D++ +TWM PLS  T
Sbjct: 80  YVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASFHIAVIIDFINFTWMCPLSFST 139

Query: 132 QQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSH 191
           +Q T N V M + ++IG DLGDC ICL+     N E V+KI  GHVYHE CIL+WLDNS 
Sbjct: 140 RQLTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSD 199

Query: 192 FCPLCRR 197
            CPLCRR
Sbjct: 200 SCPLCRR 206

BLAST of HG10007132 vs. NCBI nr
Match: XP_023512244.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-25
Identity = 83/220 (37.73%), Postives = 121/220 (55.00%), Query Frame = 0

Query: 4   VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYD 63
           +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     +
Sbjct: 9   IQHDLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNS--LFPLP-PNARN 68

Query: 64  HESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTW 123
            + +   IYIA +L S N+ +  SEII+ +IA    +  +++ + + H+VAVVD V  + 
Sbjct: 69  IDPVFLQIYIADILLSLNVGAVASEIISAQIASFTLQLAEEHNDTNVHVVAVVDNVMESR 128

Query: 124 MEPL-SIPTQQPTSNMV----------------RMEKL--EEIGEDLGDCCICLERFCCN 183
              L ++P +Q  S  V                RMEK+  EE  EDLG+C ICL+   C 
Sbjct: 129 FWRLQAVPVEQGGSAAVERREVVEEVAAANGRYRMEKVEAEEEEEDLGNCSICLDEMKCE 188

Query: 184 EEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD 204
             +V++ P GHVYHESCI +WLDNS  CPLCR     ++D
Sbjct: 189 GSEVIRTPCGHVYHESCIFRWLDNSDSCPLCRTKFPLMED 225

BLAST of HG10007132 vs. NCBI nr
Match: XP_022985641.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-25
Identity = 81/221 (36.65%), Postives = 120/221 (54.30%), Query Frame = 0

Query: 4   VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYD 63
           +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     +
Sbjct: 10  IQHDLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNS--LFPLP-PNARN 69

Query: 64  HESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVD-YVKYT 123
            + +   IYIA++L S NI +  SE+IA +IA    +  +++ + + H+VAVVD  V+  
Sbjct: 70  IDPVFLQIYIAEILLSLNIGAVASEVIAAQIASFTLQLAEEHNDTNVHVVAVVDNVVESR 129

Query: 124 WMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCC 183
           +    ++P  Q                  +   RMEK+EE  E   DLG+C ICL+   C
Sbjct: 130 FWRLQAVPVMQGGRAAEERREVVEEVAAANGRYRMEKVEEKEEEEVDLGNCSICLDEMKC 189

Query: 184 NEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD 204
              +V++ P GHVYHESCI +WLDNS  CPLCR     ++D
Sbjct: 190 EGSEVIRTPCGHVYHESCIFRWLDNSDSCPLCRTQFPLMED 227

BLAST of HG10007132 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-25
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0

Query: 34  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGE 93
           P +I+H+T   P   +N +F L  + L +      P+ YI+Q LSS NI     EI+A +
Sbjct: 45  PPRILHETPRIPF--HNALFYLSLHQLQN------PLFYISQFLSSLNICPAACEIMARQ 104

Query: 94  IALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSI----------------PTQQPTSN 153
           IA  ++   ++N   +F I+A VD+ +  WME  SI                P  +    
Sbjct: 105 IASYIDRMINENRESNFRIIAEVDFSRVIWMEEHSIYGGDAMAEETVVFDEAPPPRRGVE 164

Query: 154 MVRMEKLEEI--GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLC 204
            V +E++ E+   E+LGDCCICLE   C + +V++IP GHVYHESC+ KWL  ++ CPLC
Sbjct: 165 KVAVERVRELKSQEELGDCCICLEELSCEKREVIRIPCGHVYHESCVFKWLRKNNSCPLC 224

BLAST of HG10007132 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-25
Identity = 73/189 (38.62%), Postives = 101/189 (53.44%), Query Frame = 0

Query: 34  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGE 93
           P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +
Sbjct: 44  PHQILHQTPRIPYHNALVYLTL--------RQLQSPLFYITQFLSSLNIRPAASQSMARQ 103

Query: 94  IALLVNEATDKNPNESFHIVAVVDYVKYTWME----------------PLSIPTQQPTSN 153
           IA  + +  D+N + +FHI+A VD+++  W+E                  + P  +    
Sbjct: 104 IASHILQMPDRNGDRNFHIIAEVDFIRVIWLELEEQSMGAGAEETVVFDEAPPALKRGVG 163

Query: 154 MVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLC 204
             R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLC
Sbjct: 164 KARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLC 223

BLAST of HG10007132 vs. ExPASy Swiss-Prot
Match: Q9Y7K6 (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.9e-07
Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 0

Query: 124 EPLSIPTQQPTSNMVR--MEKLEEIGED-LGD--CCICLERFCCNEEK-VVKIPSGHVYH 183
           +P + P Q P    V+   +  E +  D L D  C IC +    N+EK   K+P GH++ 
Sbjct: 73  DPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDLTCPICYDDMNENDEKQATKMPCGHIFG 132

Query: 184 ESCILKWLDNSHFCPLCRRAI 199
           ++C+ KWL+N   CPLCR+ +
Sbjct: 133 KNCLQKWLENHCTCPLCRKEV 153

BLAST of HG10007132 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 26/62 (41.94%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 137 MVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRR 196
           + R E+ EE  E+  +CCICL  F   E+  V  P  H YH  C+ +WL     CPLCR 
Sbjct: 93  LCRRERAEE--EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRV 152

Query: 197 AI 199
           +I
Sbjct: 153 SI 152

BLAST of HG10007132 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 144 EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILP 201
           +E+ ++ G+C IC+E F  N++ V+++P  H +HE+CI  WL  +  C +CR  + P
Sbjct: 387 KELIDEEGECTICMEMFKINDD-VIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDP 442

BLAST of HG10007132 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-06
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0

Query: 153 CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD 204
           C +CL  F   EE V+++P  H++H +CIL WL  ++ CPLCR   LP  D
Sbjct: 88  CPVCLLEF-EEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHE-LPTDD 136

BLAST of HG10007132 vs. ExPASy Swiss-Prot
Match: Q9VHI7 (E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.1e-06
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0

Query: 144 EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI 199
           EE+   +  C IC + F   +E V K+P  H+YHE+CI+ WL+    CP+CR+++
Sbjct: 245 EEVNRKI-QCSICWDDFKI-DETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSL 297

BLAST of HG10007132 vs. ExPASy TrEMBL
Match: A0A0A0LW68 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573640 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 7.0e-49
Identity = 100/190 (52.63%), Postives = 128/190 (67.37%), Query Frame = 0

Query: 12  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPI 71
           + R+HQ+LEI+RR  H LMF FP QIIHQT P  L  +N  FPL F   + + E  SF  
Sbjct: 20  NHRFHQVLEIQRRISHSLMFNFPPQIIHQTLPILLDYDNNFFPLHFNFFHSYGEPSSFTF 79

Query: 72  YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSIPT 131
           Y+AQL SS NI+S  SE +A  I L+ N+  ++N N SFHI  ++D++ +TWM PLS  T
Sbjct: 80  YVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASFHIAVIIDFINFTWMCPLSFST 139

Query: 132 QQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSH 191
           +Q T N V M + ++IG DLGDC ICL+     N E V+KI  GHVYHE CIL+WLDNS 
Sbjct: 140 RQLTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSD 199

Query: 192 FCPLCRRAIL 200
            CPLCRR++L
Sbjct: 200 SCPLCRRSVL 209

BLAST of HG10007132 vs. ExPASy TrEMBL
Match: A0A6J1J8T7 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111483640 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 81/221 (36.65%), Postives = 120/221 (54.30%), Query Frame = 0

Query: 4   VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYD 63
           +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     +
Sbjct: 10  IQHDLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNS--LFPLP-PNARN 69

Query: 64  HESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVD-YVKYT 123
            + +   IYIA++L S NI +  SE+IA +IA    +  +++ + + H+VAVVD  V+  
Sbjct: 70  IDPVFLQIYIAEILLSLNIGAVASEVIAAQIASFTLQLAEEHNDTNVHVVAVVDNVVESR 129

Query: 124 WMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCC 183
           +    ++P  Q                  +   RMEK+EE  E   DLG+C ICL+   C
Sbjct: 130 FWRLQAVPVMQGGRAAEERREVVEEVAAANGRYRMEKVEEKEEEEVDLGNCSICLDEMKC 189

Query: 184 NEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD 204
              +V++ P GHVYHESCI +WLDNS  CPLCR     ++D
Sbjct: 190 EGSEVIRTPCGHVYHESCIFRWLDNSDSCPLCRTQFPLMED 227

BLAST of HG10007132 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25
Identity = 73/189 (38.62%), Postives = 101/189 (53.44%), Query Frame = 0

Query: 34  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGE 93
           P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +
Sbjct: 44  PHQILHQTPRIPYHNALVYLTL--------RQLQSPLFYITQFLSSLNIRPAASQSMARQ 103

Query: 94  IALLVNEATDKNPNESFHIVAVVDYVKYTWME----------------PLSIPTQQPTSN 153
           IA  + +  D+N + +FHI+A VD+++  W+E                  + P  +    
Sbjct: 104 IASHILQMPDRNGDRNFHIIAEVDFIRVIWLELEEQSMGAGAEETVVFDEAPPALKRGVG 163

Query: 154 MVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLC 204
             R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLC
Sbjct: 164 KARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLC 223

BLAST of HG10007132 vs. ExPASy TrEMBL
Match: A0A6J1FXN0 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111448613 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25
Identity = 84/221 (38.01%), Postives = 120/221 (54.30%), Query Frame = 0

Query: 4   VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYD 63
           +  D H D DE+    LEI+ R    L+    +QI+ +TAP PL N+  +FPLP     +
Sbjct: 9   IQHDLHSDGDEQSPPTLEIQMRSYIRLISGDLNQIVLETAPIPLRNS--LFPLP-PNARN 68

Query: 64  HESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTW 123
            + +   IYIA +L S NI +  SE+I+ +IA    +  +++ + + H+VAVVD V  + 
Sbjct: 69  IDPVFLQIYIADILLSLNIGAVASEVISAQIASFTLQLAEEHNDTNVHVVAVVDNVMESR 128

Query: 124 MEPL-SIPTQQPTSNMV----------------RMEKL---EEIGEDLGDCCICLERFCC 183
              L ++P  Q  S  V                RMEK+   EE  EDLG+C ICL+   C
Sbjct: 129 FWRLQAVPVVQGGSAAVERREVVEEVAAANGRYRMEKVEAEEEEEEDLGNCSICLDEMKC 188

Query: 184 NEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD 204
              +V++ P GHVYHESCI +WLDNS  CPLCR     ++D
Sbjct: 189 EGSEVIRTPCGHVYHESCIFRWLDNSDSCPLCRTQFPLMED 226

BLAST of HG10007132 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25
Identity = 73/189 (38.62%), Postives = 101/189 (53.44%), Query Frame = 0

Query: 34  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGE 93
           P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +
Sbjct: 44  PHQILHQTPRIPYHNALVYLTL--------RQLQSPLFYITQFLSSLNIRPAASQSMARQ 103

Query: 94  IALLVNEATDKNPNESFHIVAVVDYVKYTWME----------------PLSIPTQQPTSN 153
           IA  + +  D+N + +FHI+A VD+++  W+E                  + P  +    
Sbjct: 104 IASHILQMPDRNGDRNFHIIAEVDFIRVIWLELEEQSMGAGAEETVVFDEAPPALKRGVG 163

Query: 154 MVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLC 204
             R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLC
Sbjct: 164 KARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLC 223

BLAST of HG10007132 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-09
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 0

Query: 129 PTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLD 188
           P  +PT N +   K+  + +  D+  C +C+E F    +   ++P  H+YH+ CI+ WL 
Sbjct: 198 PASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGD-ATELPCKHIYHKDCIVPWLR 257

Query: 189 NSHFCPLCRRAILPL 202
            ++ CP+CRR  LPL
Sbjct: 258 LNNSCPICRRD-LPL 270

BLAST of HG10007132 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 25/63 (39.68%), Postives = 33/63 (52.38%), Query Frame = 0

Query: 136 NMVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCR 195
           N + +   EE G     C IC+E +      V K+P  H +H  CI KWL  +H CPLCR
Sbjct: 171 NYLNVATTEENG-----CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCR 228

Query: 196 RAI 199
            +I
Sbjct: 231 SSI 228

BLAST of HG10007132 vs. TAIR 10
Match: AT5G37270.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 0

Query: 76  LSSCNIDSDVSEIIAG-EIALLVNE--ATD-KNPNESFHIVAVVDYVKYTWMEPLSIPTQ 135
           L+S +I  D+ E I   E   L++E  A D  +  + F +   V   +   +  +++P++
Sbjct: 69  LTSHHIYQDLDEFITDIEFCRLLSERIALDCAHIPQPFSVSFYVRVTRDVMLPSIAVPSR 128

Query: 136 QPTSNMVRMEKLEEIGEDLGD-----CCICLERFC-CNEEKVVKIPS-GHVYHESCILKW 195
                ++  + +E    DLGD     C ICLE F   +++ ++ +P   H++H+SCI +W
Sbjct: 129 DMFQRLLEEQTME--FTDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEW 188

Query: 196 LDNSHFCPLCRR 197
           L     CPLCRR
Sbjct: 189 LKRQRSCPLCRR 198

BLAST of HG10007132 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0

Query: 147 GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI 199
           GED   CCICL R+  ++E+V ++P  HV+H  C+ KWL  +  CPLC+  +
Sbjct: 350 GED-ASCCICLTRY-GDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399

BLAST of HG10007132 vs. TAIR 10
Match: AT1G18770.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 0

Query: 153 CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCR 196
           C ICLE F     +VV +P GH + + C+LKW + +H CPLCR
Sbjct: 59  CIICLEEF-SEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCR 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66555.21.2e-4752.94hypothetical protein Csa_007514 [Cucumis sativus][more]
XP_023512244.12.3e-2537.73RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo][more]
XP_022985641.12.9e-2536.65RING-H2 finger protein ATL16-like [Cucurbita maxima][more]
XP_038883574.16.6e-2538.10E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida][more]
XP_016899530.16.6e-2538.62PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 ... [more]
Match NameE-valueIdentityDescription
Q9Y7K64.9e-0735.80Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
Q9SRM02.4e-0641.94RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1[more]
Q9C1X42.4e-0636.84Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra... [more]
Q6AXU44.2e-0645.10E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ... [more]
Q9VHI77.1e-0640.00E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0LW687.0e-4952.63RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573640 P... [more]
A0A6J1J8T71.4e-2536.65RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111483640 PE... [more]
A0A5D3E1S53.2e-2538.62E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A6J1FXN03.2e-2538.01RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111448613 ... [more]
A0A1S4DUZ43.2e-2538.62E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ... [more]
Match NameE-valueIdentityDescription
AT1G60360.13.2e-0934.67RING/U-box superfamily protein [more]
AT1G74620.14.6e-0839.68RING/U-box superfamily protein [more]
AT5G37270.14.6e-0829.55RING/U-box superfamily protein [more]
AT1G80400.16.0e-0844.23RING/U-box superfamily protein [more]
AT1G18770.16.0e-0848.84RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 153..194
e-value: 0.0011
score: 28.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 152..195
e-value: 1.8E-8
score: 34.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 153..195
score: 10.866448
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 125..200
e-value: 1.2E-14
score: 55.8
NoneNo IPR availablePANTHERPTHR22765:SF329SUBFAMILY NOT NAMEDcoord: 37..196
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 37..196
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 140..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007132.1HG10007132.1mRNA