HG10007062 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATGTCAAAGGGAATTACACTTGTTTTTATTGGGATTCTCTTGGTTAACTTTGGCATGATTGAGATAACAAATGCAAGGAAATACATTGGTTATGGTCCTTTAAAAGGAGATGTTAGTCCTGGATGTAGCCGAAAGCATCCTGAACTTTGTAAATTAACTCCTTCAAATCCATATCGAAGAGGTTGCAATGCAATCGAACGTTGCAGGGGAGGAAATGATATTATAGATGGTGTAGAAGAAATTGCTAAAGGTGATGCTTCCACTAGCCCGACAATAAACTCTAATGAAGAATACCACCTTGACTGA ATGATCATGTCAAAGGGAATTACACTTGTTTTTATTGGGATTCTCTTGGTTAACTTTGGCATGATTGAGATAACAAATGCAAGGAAATACATTGGTTATGGTCCTTTAAAAGGAGATGTTAGTCCTGGATGTAGCCGAAAGCATCCTGAACTTTGTAAATTAACTCCTTCAAATCCATATCGAAGAGGTTGCAATGCAATCGAACGTTGCAGGGGAGGAAATGATATTATAGATGGTGTAGAAGAAATTGCTAAAGGTGATGCTTCCACTAGCCCGACAATAAACTCTAATGAAGAATACCACCTTGACTGA ATGATCATGTCAAAGGGAATTACACTTGTTTTTATTGGGATTCTCTTGGTTAACTTTGGCATGATTGAGATAACAAATGCAAGGAAATACATTGGTTATGGTCCTTTAAAAGGAGATGTTAGTCCTGGATGTAGCCGAAAGCATCCTGAACTTTGTAAATTAACTCCTTCAAATCCATATCGAAGAGGTTGCAATGCAATCGAACGTTGCAGGGGAGGAAATGATATTATAGATGGTGTAGAAGAAATTGCTAAAGGTGATGCTTCCACTAGCCCGACAATAAACTCTAATGAAGAATACCACCTTGACTGA MIMSKGITLVFIGILLVNFGMIEITNARKYIGYGPLKGDVSPGCSRKHPELCKLTPSNPYRRGCNAIERCRGGNDIIDGVEEIAKGDASTSPTINSNEEYHLD Homology
BLAST of HG10007062 vs. NCBI nr
Match: KAE8650705.1 (hypothetical protein Csa_010421 [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of HG10007062 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia]) HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24 Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of HG10007062 vs. NCBI nr
Match: XP_022136918.1 (uncharacterized protein LOC111008495 [Momordica charantia]) HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19 Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of HG10007062 vs. NCBI nr
Match: XP_022961577.1 (protein RALF-like 9 [Cucurbita moschata]) HSP 1 Score: 100.5 bits (249), Expect = 8.8e-18 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of HG10007062 vs. NCBI nr
Match: PNX70961.1 (hypothetical protein L195_g057917 [Trifolium pratense]) HSP 1 Score: 88.2 bits (217), Expect = 4.5e-14 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy Swiss-Prot
Match: Q3ECL0 (Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-07 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy Swiss-Prot
Match: A8MQM7 (Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07 Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy Swiss-Prot
Match: A8MQM2 (Protein RALF-like 6 OS=Arabidopsis thaliana OX=3702 GN=RALFL6 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.8e-06 Identity = 22/65 (33.85%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy Swiss-Prot
Match: A8MQP2 (Protein RALF-like 29 OS=Arabidopsis thaliana OX=3702 GN=RALFL29 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.6e-06 Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy Swiss-Prot
Match: A8MQL7 (Protein RALF-like 20 OS=Arabidopsis thaliana OX=3702 GN=RALFL20 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-06 Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy TrEMBL
Match: A0A0A0L8B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28 Identity = 68/100 (68.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy TrEMBL
Match: A0A6J1DYH7 (uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025777 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 8.0e-25 Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy TrEMBL
Match: A0A6J1C8U5 (uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008495 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy TrEMBL
Match: A0A6J1HAJ8 (protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.3e-18 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of HG10007062 vs. ExPASy TrEMBL
Match: A0A2K3KXF8 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g057917 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.2e-14 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of HG10007062 vs. TAIR 10
Match: AT1G61566.1 (ralf-like 9 ) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of HG10007062 vs. TAIR 10
Match: AT2G22055.1 (RALF-like 15 ) HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08 Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of HG10007062 vs. TAIR 10
Match: AT1G60625.1 (RALF-like 6 ) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07 Identity = 22/65 (33.85%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of HG10007062 vs. TAIR 10
Match: AT4G11653.1 (RALF-like 29 ) HSP 1 Score: 52.4 bits (124), Expect = 2.6e-07 Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of HG10007062 vs. TAIR 10
Match: AT2G34825.1 (RALF-like 20 ) HSP 1 Score: 52.0 bits (123), Expect = 3.3e-07 Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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