HG10007003 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007003
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionZinc finger, FYVE/PHD-type
LocationChr10: 258553 .. 259527 (+)
RNA-Seq ExpressionHG10007003
SyntenyHG10007003
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCATTCTCATCTTCCTCCTCAACCTTGCACCCCAAATCCCCCTACTAAAATGCTTAAGGAGTGTGGGAATTGCGGCTTTCAGGGTCGGTGGATTCTGCATCACGTTCGTATACGAGGGATTAATCGACGTCTTTGCACCTCCTGCGTTCTTCGCCTTCATCCCAGTTCCTTTTGCCCTTCTTGTTTCCAGTTCTATGATCTTTCTGTCTCTCCTCATCCCTCCAATCGTTTCACTTGCTCTAAGTGTTCTTCTATTACGCATTCTCACTGCGTCGTCAACCCTGCTTGTTCCTCCGATCCTCAGCTTCTCCCGTCCACCACCTCCTCCTCTTATCTTTGCCCTCCCTGCGCCAAACCCAATTTCTCTTTTTTCGATTTGGACTCTAAGCCACGGATTTCTCCCAAGTCTATTGACAGGAAGACCGCCGTGGTATTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGGGAAGGCTGTGATTGTGGCGCGGGCGGATGCGGAGAGGAAAGTGAGGGAAGCGGCGATGGCGAGGAAGAGAGCCAGAGAGGCTCTTGAGCATGTTGGTTTTGTTTTGGCTAGAGAAAGGGCTAGGCGTAAGGAGGAGGCGTCTGTGGAGGTTTCGGGTTCTGGGAATTTGGGGATGAAGGAGAAAGAAAGGAATAAGAATTTGGGTTCTATGGTGAAAGCGGAGAATCCTTTTGAAGTGTCAACTATGAACAATGCTGGTAGTGCTTTAACTCAGAGGAGGGAGAGCTTGAATGGGTTTGTGAGACAGATGTCTATGGTGAAGAACGAGGTGGCTGCCTCCATGGAGGAAGCTGTAAGGCAGAAAAATGTTGAGGCTGAACGTTTACAGAGTAATAACAACATTCCTTTAAATGAGAAGGACAAGTCTGAGAATGGCGAAGTTGAGTATATGCAAAATGATCATATTGGAGGAACAGTTACTGTTAATATCACGAAATAG

mRNA sequence

ATGAATCATTCTCATCTTCCTCCTCAACCTTGCACCCCAAATCCCCCTACTAAAATGCTTAAGGAGTGTGGGAATTGCGGCTTTCAGGGTCGGTGGATTCTGCATCACGTTCGTATACGAGGGATTAATCGACGTCTTTGCACCTCCTGCGTTCTTCGCCTTCATCCCAGTTCCTTTTGCCCTTCTTGTTTCCAGTTCTATGATCTTTCTGTCTCTCCTCATCCCTCCAATCGTTTCACTTGCTCTAAGTGTTCTTCTATTACGCATTCTCACTGCGTCGTCAACCCTGCTTGTTCCTCCGATCCTCAGCTTCTCCCGTCCACCACCTCCTCCTCTTATCTTTGCCCTCCCTGCGCCAAACCCAATTTCTCTTTTTTCGATTTGGACTCTAAGCCACGGATTTCTCCCAAGTCTATTGACAGGAAGACCGCCGTGGTATTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGGGAAGGCTGTGATTGTGGCGCGGGCGGATGCGGAGAGGAAAGTGAGGGAAGCGGCGATGGCGAGGAAGAGAGCCAGAGAGGCTCTTGAGCATGTTGGTTTTGTTTTGGCTAGAGAAAGGGCTAGGCGTAAGGAGGAGGCGTCTGTGGAGGTTTCGGGTTCTGGGAATTTGGGGATGAAGGAGAAAGAAAGGAATAAGAATTTGGGTTCTATGGTGAAAGCGGAGAATCCTTTTGAAGTGTCAACTATGAACAATGCTGGTAGTGCTTTAACTCAGAGGAGGGAGAGCTTGAATGGGTTTGTGAGACAGATGTCTATGGTGAAGAACGAGGTGGCTGCCTCCATGGAGGAAGCTGTAAGGCAGAAAAATGTTGAGGCTGAACGTTTACAGAGTAATAACAACATTCCTTTAAATGAGAAGGACAAGTCTGAGAATGGCGAAGTTGAGTATATGCAAAATGATCATATTGGAGGAACAGTTACTGTTAATATCACGAAATAG

Coding sequence (CDS)

ATGAATCATTCTCATCTTCCTCCTCAACCTTGCACCCCAAATCCCCCTACTAAAATGCTTAAGGAGTGTGGGAATTGCGGCTTTCAGGGTCGGTGGATTCTGCATCACGTTCGTATACGAGGGATTAATCGACGTCTTTGCACCTCCTGCGTTCTTCGCCTTCATCCCAGTTCCTTTTGCCCTTCTTGTTTCCAGTTCTATGATCTTTCTGTCTCTCCTCATCCCTCCAATCGTTTCACTTGCTCTAAGTGTTCTTCTATTACGCATTCTCACTGCGTCGTCAACCCTGCTTGTTCCTCCGATCCTCAGCTTCTCCCGTCCACCACCTCCTCCTCTTATCTTTGCCCTCCCTGCGCCAAACCCAATTTCTCTTTTTTCGATTTGGACTCTAAGCCACGGATTTCTCCCAAGTCTATTGACAGGAAGACCGCCGTGGTATTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGGGAAGGCTGTGATTGTGGCGCGGGCGGATGCGGAGAGGAAAGTGAGGGAAGCGGCGATGGCGAGGAAGAGAGCCAGAGAGGCTCTTGAGCATGTTGGTTTTGTTTTGGCTAGAGAAAGGGCTAGGCGTAAGGAGGAGGCGTCTGTGGAGGTTTCGGGTTCTGGGAATTTGGGGATGAAGGAGAAAGAAAGGAATAAGAATTTGGGTTCTATGGTGAAAGCGGAGAATCCTTTTGAAGTGTCAACTATGAACAATGCTGGTAGTGCTTTAACTCAGAGGAGGGAGAGCTTGAATGGGTTTGTGAGACAGATGTCTATGGTGAAGAACGAGGTGGCTGCCTCCATGGAGGAAGCTGTAAGGCAGAAAAATGTTGAGGCTGAACGTTTACAGAGTAATAACAACATTCCTTTAAATGAGAAGGACAAGTCTGAGAATGGCGAAGTTGAGTATATGCAAAATGATCATATTGGAGGAACAGTTACTGTTAATATCACGAAATAG

Protein sequence

MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMARKRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFEVSTMNNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEAERLQSNNNIPLNEKDKSENGEVEYMQNDHIGGTVTVNITK
Homology
BLAST of HG10007003 vs. NCBI nr
Match: XP_038878318.1 (uncharacterized protein LOC120070585 [Benincasa hispida])

HSP 1 Score: 550.8 bits (1418), Expect = 7.7e-153
Identity = 296/331 (89.43%), Postives = 305/331 (92.15%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH HLPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHP NRFTCSKCSSITHSHCVVNPAC  DPQLL STT SSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPVNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTT-SSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFE--- 240
           KRAREALEHVGF+LARERARRKEEAS+EVSGSGNL MKE ERN+NLGSMVK ENPFE   
Sbjct: 181 KRAREALEHVGFLLARERARRKEEASMEVSGSGNLVMKENERNRNLGSMVKVENPFEVPA 240

Query: 241 VSTMNNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEAERLQSNNNIPLNE 300
           VST+NN GSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEA+RLQSNNNI LNE
Sbjct: 241 VSTLNNTGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEADRLQSNNNIGLNE 300

Query: 301 KDKS----ENGEVEYMQNDHIGGTVTVNITK 325
           K+KS    ENGEVE++Q+D IGG   VN TK
Sbjct: 301 KEKSGNENENGEVEHVQHDRIGG--IVNTTK 327

BLAST of HG10007003 vs. NCBI nr
Match: XP_008450515.1 (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 putative DNA binding protein [Cucumis melo var. makuwa] >TYK10311.1 putative DNA binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-151
Identity = 291/328 (88.72%), Postives = 303/328 (92.38%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH HLPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC  DPQLL ST+SSSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTSSSSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIAS SMGKA IVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFEVST 240
           KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERN+NLG  VKAEN FE+  
Sbjct: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPA 240

Query: 241 MN--NAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-AERLQSNNNIP-LN 300
           ++  N G+ALTQRRESLNGFVRQMSMVKNEVAASMEE+ R KNVE AERLQSNNNI  LN
Sbjct: 241 VSTLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLN 300

Query: 301 EKDKSENGEVEYMQNDHIGGTVTVNITK 325
           EK+K+ENGEVE+++NDHIGG  TVN TK
Sbjct: 301 EKEKNENGEVEHVKNDHIGG--TVNTTK 325

BLAST of HG10007003 vs. NCBI nr
Match: XP_011659447.1 (uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical protein Csa_007541 [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 1.2e-148
Identity = 291/329 (88.45%), Postives = 301/329 (91.49%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH  LPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC  DPQLL STTSSSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTTSSSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFD DSKPRISPKSIDRKTAVVLLCAAKIASASM KAVIVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFE--- 240
           KRAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERN+ LG  VKAEN FE   
Sbjct: 181 KRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPA 240

Query: 241 VSTMNNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-AERLQSNNNIP-L 300
           VST+ N GSALTQRRESLNGFVRQMSMVKNE AASMEE+ R KNVE AERLQSNNNI  L
Sbjct: 241 VSTL-NTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLL 300

Query: 301 NEKDKSENGEVEYMQNDHIGGTVTVNITK 325
           NEK+K+ENGEVE+++NDHIGG  TVN TK
Sbjct: 301 NEKEKNENGEVEHVKNDHIGG--TVNTTK 325

BLAST of HG10007003 vs. NCBI nr
Match: XP_022155464.1 (uncharacterized protein LOC111022599 [Momordica charantia])

HSP 1 Score: 469.9 bits (1208), Expect = 1.7e-128
Identity = 259/339 (76.40%), Postives = 285/339 (84.07%), Query Frame = 0

Query: 1   MNHSHLPPQPC---------TPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCV 60
           MNH   PP P           PNPPTKM  ECGNCG Q RW+LHHVR+RG+NRRLCTSCV
Sbjct: 1   MNHPRPPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCV 60

Query: 61  LRLHPSSFCPSCFQFYDLSVSPH--PSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTT 120
           LRLHP+SFCPSCFQFYD S SPH  PSNRFTC KCSSI+HSHCV++P+ SSDP  L S++
Sbjct: 61  LRLHPTSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVLSPS-SSDPHPL-SSS 120

Query: 121 SSSYLCPPCAKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADA 180
           SSSYLCPPCAKPNFSFFDLDSKPRIS KSIDRK AVVLLCAAKIASASMGKAVIVARADA
Sbjct: 121 SSSYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADA 180

Query: 181 ERKVREAAMARKRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSM 240
           ERKVREAA+ARKRAREALEHVGFV+ARERARRKEEASVEVSGSG++G+KEKERN+NLGSM
Sbjct: 181 ERKVREAAIARKRAREALEHVGFVVARERARRKEEASVEVSGSGSIGIKEKERNRNLGSM 240

Query: 241 VKAENPFEVSTM--NNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEAERL 300
           VK EN  E S +  +N  SALT RRESLNGFVRQMSMVKN+VAAS+EEA+RQKNVEA+RL
Sbjct: 241 VKMENSCEGSAVANSNTSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVEADRL 300

Query: 301 QSNNNIPLNEKDKS--------ENGEVEYMQNDHIGGTV 319
           QS+NN  LNEK+KS        ENGEV+ + ND IGG V
Sbjct: 301 QSSNNNTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNV 337

BLAST of HG10007003 vs. NCBI nr
Match: KAG6590513.1 (hypothetical protein SDJN03_15936, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445.7 bits (1145), Expect = 3.5e-121
Identity = 246/320 (76.88%), Postives = 267/320 (83.44%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH HLPP      PPTK+  ECGNCG  GRWILHHVR+RGINRRLCTSCVLRLHP+SFC
Sbjct: 1   MNHPHLPPP-----PPTKVQTECGNCGSHGRWILHHVRLRGINRRLCTSCVLRLHPTSFC 60

Query: 61  PSCFQFYDLSVS-PHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCA 120
           PSCF FYD SVS PHPSNR TC KCSSITHSHCV+NPA SSDP LL S+T  SYLCPPCA
Sbjct: 61  PSCFHFYDPSVSPPHPSNRLTCLKCSSITHSHCVLNPA-SSDPHLLSSST--SYLCPPCA 120

Query: 121 KPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMA 180
           KPNFSFFDLDS PR S KSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVRE A+A
Sbjct: 121 KPNFSFFDLDSLPRNSHKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREVAVA 180

Query: 181 RKRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFEVS 240
           RKRAREALEHVGF+LARERARRKEEAS+EVSGSGN+  K+KERN+NLGSMVK EN  E  
Sbjct: 181 RKRAREALEHVGFLLARERARRKEEASMEVSGSGNMETKDKERNRNLGSMVKTENSLETP 240

Query: 241 TMN--NAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEAERLQSNNNIPLNE 300
            +   N G+ LTQRRESLNGFVRQMSMVKNE AAS++E       EA+RLQSNN IP +E
Sbjct: 241 AVPTLNTGTTLTQRRESLNGFVRQMSMVKNEAAASLQE-----TAEADRLQSNNTIPSSE 300

Query: 301 KDKS----ENGEVEYMQNDH 314
           K+KS    +NG+VE +QNDH
Sbjct: 301 KEKSGNCADNGDVENVQNDH 307

BLAST of HG10007003 vs. ExPASy TrEMBL
Match: A0A5D3CEV9 (Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004650 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.1e-152
Identity = 291/328 (88.72%), Postives = 303/328 (92.38%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH HLPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC  DPQLL ST+SSSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTSSSSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIAS SMGKA IVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFEVST 240
           KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERN+NLG  VKAEN FE+  
Sbjct: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPA 240

Query: 241 MN--NAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-AERLQSNNNIP-LN 300
           ++  N G+ALTQRRESLNGFVRQMSMVKNEVAASMEE+ R KNVE AERLQSNNNI  LN
Sbjct: 241 VSTLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLN 300

Query: 301 EKDKSENGEVEYMQNDHIGGTVTVNITK 325
           EK+K+ENGEVE+++NDHIGG  TVN TK
Sbjct: 301 EKEKNENGEVEHVKNDHIGG--TVNTTK 325

BLAST of HG10007003 vs. ExPASy TrEMBL
Match: A0A1S3BQ20 (uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.1e-152
Identity = 291/328 (88.72%), Postives = 303/328 (92.38%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH HLPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC  DPQLL ST+SSSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTSSSSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIAS SMGKA IVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFEVST 240
           KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERN+NLG  VKAEN FE+  
Sbjct: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPA 240

Query: 241 MN--NAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-AERLQSNNNIP-LN 300
           ++  N G+ALTQRRESLNGFVRQMSMVKNEVAASMEE+ R KNVE AERLQSNNNI  LN
Sbjct: 241 VSTLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLN 300

Query: 301 EKDKSENGEVEYMQNDHIGGTVTVNITK 325
           EK+K+ENGEVE+++NDHIGG  TVN TK
Sbjct: 301 EKEKNENGEVEHVKNDHIGG--TVNTTK 325

BLAST of HG10007003 vs. ExPASy TrEMBL
Match: A0A0A0LYS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.6e-149
Identity = 291/329 (88.45%), Postives = 301/329 (91.49%), Query Frame = 0

Query: 1   MNHSHLPPQPCTPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNH  LPP P TPNPPTKMLKECGNCG QGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAK 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC  DPQLL STTSSSYLCPPCAK
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPAC-PDPQLLSSTTSSSYLCPPCAK 120

Query: 121 PNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMAR 180
           PNFSFFD DSKPRISPKSIDRKTAVVLLCAAKIASASM KAVIVARADAERKVREAAMAR
Sbjct: 121 PNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMAR 180

Query: 181 KRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSMVKAENPFE--- 240
           KRAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERN+ LG  VKAEN FE   
Sbjct: 181 KRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPA 240

Query: 241 VSTMNNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-AERLQSNNNIP-L 300
           VST+ N GSALTQRRESLNGFVRQMSMVKNE AASMEE+ R KNVE AERLQSNNNI  L
Sbjct: 241 VSTL-NTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLL 300

Query: 301 NEKDKSENGEVEYMQNDHIGGTVTVNITK 325
           NEK+K+ENGEVE+++NDHIGG  TVN TK
Sbjct: 301 NEKEKNENGEVEHVKNDHIGG--TVNTTK 325

BLAST of HG10007003 vs. ExPASy TrEMBL
Match: A0A6J1DQC5 (uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022599 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.4e-129
Identity = 259/339 (76.40%), Postives = 285/339 (84.07%), Query Frame = 0

Query: 1   MNHSHLPPQPC---------TPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCV 60
           MNH   PP P           PNPPTKM  ECGNCG Q RW+LHHVR+RG+NRRLCTSCV
Sbjct: 1   MNHPRPPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCV 60

Query: 61  LRLHPSSFCPSCFQFYDLSVSPH--PSNRFTCSKCSSITHSHCVVNPACSSDPQLLPSTT 120
           LRLHP+SFCPSCFQFYD S SPH  PSNRFTC KCSSI+HSHCV++P+ SSDP  L S++
Sbjct: 61  LRLHPTSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVLSPS-SSDPHPL-SSS 120

Query: 121 SSSYLCPPCAKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADA 180
           SSSYLCPPCAKPNFSFFDLDSKPRIS KSIDRK AVVLLCAAKIASASMGKAVIVARADA
Sbjct: 121 SSSYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADA 180

Query: 181 ERKVREAAMARKRAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNKNLGSM 240
           ERKVREAA+ARKRAREALEHVGFV+ARERARRKEEASVEVSGSG++G+KEKERN+NLGSM
Sbjct: 181 ERKVREAAIARKRAREALEHVGFVVARERARRKEEASVEVSGSGSIGIKEKERNRNLGSM 240

Query: 241 VKAENPFEVSTM--NNAGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEAERL 300
           VK EN  E S +  +N  SALT RRESLNGFVRQMSMVKN+VAAS+EEA+RQKNVEA+RL
Sbjct: 241 VKMENSCEGSAVANSNTSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVEADRL 300

Query: 301 QSNNNIPLNEKDKS--------ENGEVEYMQNDHIGGTV 319
           QS+NN  LNEK+KS        ENGEV+ + ND IGG V
Sbjct: 301 QSSNNNTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNV 337

BLAST of HG10007003 vs. ExPASy TrEMBL
Match: A0A6P3Z9P1 (uncharacterized protein LOC107411671 OS=Ziziphus jujuba OX=326968 GN=LOC107411671 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 155/303 (51.16%), Postives = 190/303 (62.71%), Query Frame = 0

Query: 22  ECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
           ECGNCG Q RW+LHHVRIRGI+RRLCTSCVLRLHPSSFCPSC Q YD + +P  S R TC
Sbjct: 34  ECGNCGSQKRWVLHHVRIRGIHRRLCTSCVLRLHPSSFCPSCLQCYDTTNTPVSSKRLTC 93

Query: 82  SKCSSITHSHCVVNPACSSDPQLLPSTTSSS-YLCPPCAKPNFSFFDLDSKPRISPKSID 141
           +KCSS THSHC   P  S+      +T SSS YLCPPCA PNF+FFDLDS P    K+ID
Sbjct: 94  AKCSSFTHSHCASLPPPSASSTTTNTTPSSSTYLCPPCATPNFTFFDLDSDPN---KAID 153

Query: 142 RKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMARKRAREALEHVGFVL--ARER 201
           ++ A+VLLCA+KIAS SM KAVIVARA+AER+VREAA+ARKRAREAL+H+  ++    ++
Sbjct: 154 KRLALVLLCASKIASTSMAKAVIVARAEAERRVREAALARKRAREALDHLALLVHSRGDK 213

Query: 202 ARRKEEASV-EVSGSGNLGMKEKERNKNLGSMVKAENPFEVSTMNNAGSALTQRRESLNG 261
             RK+ A V EVSGS NL  K KE+ K                  N     +Q +E  NG
Sbjct: 214 VVRKDVAEVSEVSGSANLVHKHKEKEKE----------------KNPPLFASQGKEMFNG 273

Query: 262 FVRQMSMVKNEVAASMEEAVRQKNVEAER---LQSNNNIPLNEKDKS----ENGEVEYMQ 314
           F         + + S     +  N E E     QSN N+  N+K+KS    +   +E  Q
Sbjct: 274 FNSPRQNPAMKPSGSPPPNKKSNNGEPEHGCANQSNGNV--NDKEKSGDLVKRESMELEQ 315

BLAST of HG10007003 vs. TAIR 10
Match: AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-31
Identity = 104/276 (37.68%), Postives = 144/276 (52.17%), Query Frame = 0

Query: 12  TPNPPTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSV 71
           T +      + C +CG    W++H VR+R   R  CT C+LR HP+SFCP CF  YD   
Sbjct: 15  TSDAAANSTERCDDCGSSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD--S 74

Query: 72  SPHPSNRFTCS--KCSSITHSHCVVNPACSSDPQLLPSTTSSSYLCPPCAKPN-FSFFDL 131
           SP    R +CS   C S+TH H      C+ D   L      SYLCPPC  PN FSFF  
Sbjct: 75  SPPSFRRVSCSIKGCHSLTHIH------CAGDESHL------SYLCPPCRDPNSFSFF-- 134

Query: 132 DSKPRI---SPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMARKRARE 191
             +P +     + +D+  +   LCAAKIA++SM KAV+ A+ + +R+ +EAA+A+KRARE
Sbjct: 135 --RPIVDENGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRARE 194

Query: 192 ALEHVGFVLARERAR----RKEEASVEVS-----GSGNLGMKEKERNKNLGSMVKAENPF 251
           ALE V  + A+E+AR    + +EA V+        S    +KE E      S      P 
Sbjct: 195 ALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASNGATVKETE------SSDTTTTPT 254

Query: 252 EVSTMNNAGSALTQRRESLNGFVRQMSMVKNEVAAS 273
             +T NN G   T+++        Q++ VK E  AS
Sbjct: 255 TTTTKNNGG---TEKQNP----ATQLAKVKQEADAS 259

BLAST of HG10007003 vs. TAIR 10
Match: AT3G17460.1 (PHD finger family protein )

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-18
Identity = 67/201 (33.33%), Postives = 102/201 (50.75%), Query Frame = 0

Query: 16  PTKMLKECGNCGFQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHP 75
           P +  +EC  C  +    +H V   G  RRLCT C+L+ +   FC  CF  +D +V P  
Sbjct: 3   PEQKQRECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA 62

Query: 76  SNRFTCSKCSSITHSHCVVNPACSSDPQLLPST--TSSSYLCPPCAKPNFSFF------- 135
             R  C  C S TH  C   P  SS      S    +SS+ C PC+ PNF+FF       
Sbjct: 63  --RIICVNCPSSTHLSCSTQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFPKSRVNE 122

Query: 136 DLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMARKRAREA 195
           D+  +  ++PKS     A+ L+ A  I+ A+M KAV + + +A +K+  A  A+ RA+ A
Sbjct: 123 DVPDETPLTPKS-----AMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGA 182

Query: 196 LEHVGFVLARE---RARRKEE 205
           L ++  ++ R+     +RKE+
Sbjct: 183 LTNLQDIVIRQSKVTGKRKED 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878318.17.7e-15389.43uncharacterized protein LOC120070585 [Benincasa hispida][more]
XP_008450515.11.5e-15188.72PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 put... [more]
XP_011659447.11.2e-14888.45uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical ... [more]
XP_022155464.11.7e-12876.40uncharacterized protein LOC111022599 [Momordica charantia][more]
KAG6590513.13.5e-12176.88hypothetical protein SDJN03_15936, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CEV97.1e-15288.72Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BQ207.1e-15288.72uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=... [more]
A0A0A0LYS35.6e-14988.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1[more]
A0A6J1DQC58.4e-12976.40uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6P3Z9P11.1e-5951.16uncharacterized protein LOC107411671 OS=Ziziphus jujuba OX=326968 GN=LOC10741167... [more]
Match NameE-valueIdentityDescription
AT1G09520.11.6e-3137.68LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... [more]
AT3G17460.12.7e-1833.33PHD finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableCOILSCoilCoilcoord: 270..290
NoneNo IPR availablePANTHERPTHR34451:SF15DNA-BINDING PROTEINcoord: 1..264
NoneNo IPR availablePANTHERPTHR34451PHD FINGER FAMILY PROTEINcoord: 1..264

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007003.1HG10007003.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding