HG10006954 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006954
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CLP protease regulatory subunit CLPX2
Location	Chr07: 23575434 .. 23579196 (-)
RNA-Seq Expression	HG10006954
Synteny	HG10006954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCACATCACAGTGCACCAGGTGCCACTGTTGTGAGCTCAGAAATTTCTTCACTGCAACTTTCGCGGGCGATGCTCATTCCCTCTTTACAATTCCACAAGAACTTCGAAGCCGTACAATCATCCGATCAGATTACTCAAAAAGCCACTATGATTACACGATTCAGAGTCAAGAACACCGAATTCATCAAGCTATTCACATCGATCAGAACTATCACCACCACTGACTCGCTGTTACACCACCGCTTCTCAACTCCACTTCCATCTAAACCCTCTCTACAACACCCCGCCGCCGCCGGATTGTTCCTTTGGTTTTCTCAGAAACGCCACAGTTGGAAAGGGGCCTCCGACTACGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCACCAATCGCCCCTTGTCCATTACGGGTCGGGAGACTGGCGTCTATCAAGCCCTCAATCTCTGCCCCAATTGCAAAACTGCTTTCTATTTTAGACCCTTCAAGCTGGTTCCTTTGCAGGGTACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGAACTTGGATGACGATGTGGACAATGGATCGAGTCAACCTACGAAAGGAGATCTTGGCGCCAATTATGCTGATGATTCGGCCTTGCCTCCACGGTGGAATGGTAGCTGTGGCGGTGGCGATGGTAACTTGGGTTCGGTGGAGAGTAACGGTGTTCAAAAGGGCGAGGCCACTTTAGAAATGCAGTTGCTAACTCCTAAGGAAATTTCTGAGGCGCTGGACAAGTTCATCGTTGGACAAGAAAATGCCAAGAAGGTTGGTTTCGGGTGATATGACAATATTATTGTGCTTCTTTTGACTTTTTTTTAAGTATTTTCTGCACATTTTAATGATTTTCGTGGCATCTTTTTCATAATTGAGGAAGTGTACGCTTCTCTTTTATGTTTTGGTTAGAAACTAAACATTTAATTGATAAAACGAAACTATAAATGAGGGACTACTATCCCTACCTAAGCATGGAGTTATAAAAAGACTCCAATTGGCATTGATGAAGAAAAGAGTGATTGCAAACAGAATTATTCCATTGGAAGAATGTTTTCACGAGGAAGTTGCAAAACAACACCGTCAAAAAGGAACACTTAAAATTTCCGTGAAGACAGGCGAACAACAAAGTTAAGGAAAAGAAGTCTCTTGATGAAGGTAGAAGACCATTTTCAAAACAATTTCCCATCTGACCAAGTTAGAACCCTCGTGTTTCTCCACTCCCTCCTAAAGAAAGTTCCTCATGATCTTCTTCCAGCCTACTACGAATTGTAAAGAAGACCATAACCAATGATAGGAAATAGTAGGAATCCCACCCAACACTGACAGAATGAGAGTTCCTACCACCCTAGAAAAGAATACCTTCTTAGATAATTCCTTTTGTTCTTCTCAACCACTAGGTTATAAAAAGATAGATAGAGTGTGGCTTTTGAACCTATTAATGGTGATAAGGGAATCCTGGAGCTGCCACTTGCTGCTTGTTCAGGATTTGCAAAACCACCCATTACTATCAGCTCTATACTTGCTGGTATAACTTAAAGAGTTTTATTCTCTAGGCCTCTTTCCTTGTGATGTTGTGGCCCCCCCTTTCCAGAGGCAAGGTGATTTAGGACATCCTATGTGTTTTTGGGATCTTTTCTTGATCTTGGGTAGTTCTTGACTTTCTTGTAATTCTTGTTCAAGATCTTGTTTTCCGGATGGTTCGTTTCTTTTAAGCCATAACAGGAGCAATTGAATCTTGATAGTCAATAGAATACCATATGTTTGAGTGAAGTCTTTAGCTACTAGTCTGACCTTATATCTCTCAGTTAACCGCCTAACGGTTTCTTATCATTTGGTAACTCTACTATTTCCCAAGTACCTTAAACGACATTTTATGGTAAACACCCATTTACAGCCTACCAATTTCTTATCTTTTGATGACTCTACTATTTCTCCTCCATGACTGCTAGTTTCCAATTTGGATTTTCTAAAGCCTCATGTATATTCCTTGGAACAACCAAGTAATTTATCCTAATTCCTAGATGTGAAGTCTTTATGACTCTTTGCCAATCTTTTATATGAGATATAGTTTGCAATAGGATATTTGGTACAAGTTCGAATGCCTTTTCTAGTGACTATGGGAACATCAAGATTAGACACAATATTTTGAGGGAGATAAATAACAGAGTGTTTGGAGGTGTCAAGAGGGACCCAATGATGTTTGACACTTGGTGAAGTTCCATGTTTCTCGTTGAACTTTGATTTTGAAAACTTTTTGCAATTACTCTTTTTGCAATTTTTTTTTTTTTTTTTTTTTACTTGAAGAGTATCCCAAGGAAATGCATTTAATAGCCCTATGATTAAGTTTGGGTCGAAAGTGGTTGGGTATGTGGACATAATTATTAGTTACAGAAAAAAAAAAAAAAAAAGAAAACAAAAACTTTGAGAGGTAAATCAAAATATGTGGGATGTTGGAAAAACATTTTTGAGACAGTCAACGAGAGTTTTAAAATTCAAGATATGAGGTAGGTAGTTGTGAGAATTGTGCCCTCCCTAGAGTAACTGAAGTTTGGTCTGTTGTTCTTTTCTCCTGGTTTAACCAAATATGTTTTCACAGAATTTTATTATTGAAGGCAAACAGTTAACTTTTCCAAACAGCTCCCAGACGTTAACTTATTTTCCACATTCTACTGGTCCAAGAATATATAATATTTAGGTTTTTTAAGTTCATGTAGATGGTTCATTTTCTGGTAATTCTTCTTCTTTTTGTTGAAACATATCTCATCCTTATCTCTTATGATCACTCTTTTCACTACAAAAATCTTTACAGATATAAGACTGATGCTTTTCTTTTTCCTGCTTAGTCTCTTCGTATTGTATTCGTTCTTGTTCTTTTTGTTTTTTGTTTTATTGTACTTTGAGCATTAGTCTCTTTTCATTAATTCAATAAAAAGTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACCTTCCTGATAGTCCTACCTTATTGCACCTATTGTGTACACTGGGATGAAAGGATGAGGATTAATCCAGGAAGAAGTTTAGTGTTATTTAGAATTCTTAAACTTTTGGTCCATTGATTTTACCATGAATCTATCATTTTGATTGATATAATGTTAACATTTCAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATGCTTCATTGCAGAAAACGTTAGTTTGCAAGAGTTGACCAGTTGTGTCATTTTGCAATCCTTTTCAAAATATAATTTAAATATGCTTAATATTGCTTACTGATGTTTATGGAGTTCACTGCGATAGTCTTTATTTAAAGAAAAAAAGTAGTGTTATTTATGAGGGAAAGATATTTCTGGGATGTTAATGATTGTGCTTGGCTTTGAGTTGGTGTCTACATTTGTATTTAGATCAGGGCAAGGATTGCTGGGTATTGAATTGGAGAATGATGATAACGAAATTGTGGAATTGGAAAAGAGTAATGTGTTGCTAATGGGTCCTACAGGCTCAGGTACGATTAATTTTCTTTTGCATTTCTTTTTTGCGTCCAAGAGCCTTAATTTTGTTAGAGGTTTTTCATTAACCATTTATGGAATCTCCAAGGATAGGGAAGACATTACTTGCAAAAACCCTTGCTCGTGTTGTAAACGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAAGTGCATTTTCAGGATAG

mRNA sequence

ATGTCATCACATCACAGTGCACCAGGTGCCACTGTTGTGAGCTCAGAAATTTCTTCACTGCAACTTTCGCGGGCGATGCTCATTCCCTCTTTACAATTCCACAAGAACTTCGAAGCCGTACAATCATCCGATCAGATTACTCAAAAAGCCACTATGATTACACGATTCAGAGTCAAGAACACCGAATTCATCAAGCTATTCACATCGATCAGAACTATCACCACCACTGACTCGCTGTTACACCACCGCTTCTCAACTCCACTTCCATCTAAACCCTCTCTACAACACCCCGCCGCCGCCGGATTGTTCCTTTGGTTTTCTCAGAAACGCCACAGTTGGAAAGGGGCCTCCGACTACGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCACCAATCGCCCCTTGTCCATTACGGGTCGGGAGACTGGCGTCTATCAAGCCCTCAATCTCTGCCCCAATTGCAAAACTGCTTTCTATTTTAGACCCTTCAAGCTGGTTCCTTTGCAGGGTACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGAACTTGGATGACGATGTGGACAATGGATCGAGTCAACCTACGAAAGGAGATCTTGGCGCCAATTATGCTGATGATTCGGCCTTGCCTCCACGGTGGAATGGTAGCTGTGGCGGTGGCGATGGTAACTTGGGTTCGGTGGAGAGTAACGGTGTTCAAAAGGGCGAGGCCACTTTAGAAATGCAGTTGCTAACTCCTAAGGAAATTTCTGAGGCGCTGGACAAGTTCATCGTTGGACAAGAAAATGCCAAGAAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATGCTTCATTGCAGAAAACATCAGGGCAAGGATTGCTGGGTATTGAATTGGAGAATGATGATAACGAAATTGTGGAATTGGAAAAGAGTAATGTGTTGCTAATGGGTCCTACAGGCTCAGGGAAGACATTACTTGCAAAAACCCTTGCTCGTGTTGTAAACGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAAGTGCATTTTCAGGATAG

Coding sequence (CDS)

ATGTCATCACATCACAGTGCACCAGGTGCCACTGTTGTGAGCTCAGAAATTTCTTCACTGCAACTTTCGCGGGCGATGCTCATTCCCTCTTTACAATTCCACAAGAACTTCGAAGCCGTACAATCATCCGATCAGATTACTCAAAAAGCCACTATGATTACACGATTCAGAGTCAAGAACACCGAATTCATCAAGCTATTCACATCGATCAGAACTATCACCACCACTGACTCGCTGTTACACCACCGCTTCTCAACTCCACTTCCATCTAAACCCTCTCTACAACACCCCGCCGCCGCCGGATTGTTCCTTTGGTTTTCTCAGAAACGCCACAGTTGGAAAGGGGCCTCCGACTACGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCACCAATCGCCCCTTGTCCATTACGGGTCGGGAGACTGGCGTCTATCAAGCCCTCAATCTCTGCCCCAATTGCAAAACTGCTTTCTATTTTAGACCCTTCAAGCTGGTTCCTTTGCAGGGTACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGAACTTGGATGACGATGTGGACAATGGATCGAGTCAACCTACGAAAGGAGATCTTGGCGCCAATTATGCTGATGATTCGGCCTTGCCTCCACGGTGGAATGGTAGCTGTGGCGGTGGCGATGGTAACTTGGGTTCGGTGGAGAGTAACGGTGTTCAAAAGGGCGAGGCCACTTTAGAAATGCAGTTGCTAACTCCTAAGGAAATTTCTGAGGCGCTGGACAAGTTCATCGTTGGACAAGAAAATGCCAAGAAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATGCTTCATTGCAGAAAACATCAGGGCAAGGATTGCTGGGTATTGAATTGGAGAATGATGATAACGAAATTGTGGAATTGGAAAAGAGTAATGTGTTGCTAATGGGTCCTACAGGCTCAGGGAAGACATTACTTGCAAAAACCCTTGCTCGTGTTGTAAACGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAAGTGCATTTTCAGGATAG

Protein sequence

MSSHHSAPGATVVSSEISSLQLSRAMLIPSLQFHKNFEAVQSSDQITQKATMITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQHPAAAGLFLWFSQKRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFYFRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCGGGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQASAFSG

Homology

[Close]

BLAST of HG10006954 vs. NCBI nr
Match: XP_038876518.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-151
Identity = 282/311 (90.68%), Postives = 289/311 (92.93%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNTEFIKLFTS+RTITTTDS  H RF TPLPSKP LQ H AA  AGLFLWFSQ
Sbjct: 1   MIPRFRVKNTEFIKLFTSMRTITTTDSPFHRRFITPLPSKPFLQPHAAARSAGLFLWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           +RHSWKGASDYDYIRADVNCPRCSKQMP+IF+NRPLSIT RETGVYQALNLCPNCKTAFY
Sbjct: 61  RRHSWKGASDYDYIRADVNCPRCSKQMPLIFSNRPLSITARETGVYQALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSC- 231
           FRPFKLVPLQGTFIEIGRVKGAR+LDD V N SSQ TKGDLGAN  DDSALPPRWNGSC 
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDDHVGNESSQHTKGDLGANCTDDSALPPRWNGSCG 180

Query: 232 -GGGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYK 291
            GGGDGNLGSVESNGVQKG+ +LEMQLLTPKEISEALDKFIVGQE AKKVLSVAVYNHYK
Sbjct: 181 GGGGDGNLGSVESNGVQKGDGSLEMQLLTPKEISEALDKFIVGQEKAKKVLSVAVYNHYK 240

Query: 292 RIYHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF 351
           RIYHASLQKTSGQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF
Sbjct: 241 RIYHASLQKTSGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF 300

Query: 352 TIADATALTQA 358
           TIADATALTQA
Sbjct: 301 TIADATALTQA 311

[Close]

BLAST of HG10006954 vs. NCBI nr
Match: XP_038876517.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-151
Identity = 282/311 (90.68%), Postives = 289/311 (92.93%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNTEFIKLFTS+RTITTTDS  H RF TPLPSKP LQ H AA  AGLFLWFSQ
Sbjct: 1   MIPRFRVKNTEFIKLFTSMRTITTTDSPFHRRFITPLPSKPFLQPHAAARSAGLFLWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           +RHSWKGASDYDYIRADVNCPRCSKQMP+IF+NRPLSIT RETGVYQALNLCPNCKTAFY
Sbjct: 61  RRHSWKGASDYDYIRADVNCPRCSKQMPLIFSNRPLSITARETGVYQALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSC- 231
           FRPFKLVPLQGTFIEIGRVKGAR+LDD V N SSQ TKGDLGAN  DDSALPPRWNGSC 
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDDHVGNESSQHTKGDLGANCTDDSALPPRWNGSCG 180

Query: 232 -GGGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYK 291
            GGGDGNLGSVESNGVQKG+ +LEMQLLTPKEISEALDKFIVGQE AKKVLSVAVYNHYK
Sbjct: 181 GGGGDGNLGSVESNGVQKGDGSLEMQLLTPKEISEALDKFIVGQEKAKKVLSVAVYNHYK 240

Query: 292 RIYHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF 351
           RIYHASLQKTSGQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF
Sbjct: 241 RIYHASLQKTSGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPF 300

Query: 352 TIADATALTQA 358
           TIADATALTQA
Sbjct: 301 TIADATALTQA 311

[Close]

BLAST of HG10006954 vs. NCBI nr
Match: KAG6601668.1 (CLP protease regulatory subunit CLPX2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.9 bits (1361), Expect = 3.5e-146
Identity = 271/310 (87.42%), Postives = 283/310 (91.29%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNT+FIKLFTSIR+ITTTDSL HHRF TPLPSKPSL+ H AA  AG  LWFSQ
Sbjct: 1   MIPRFRVKNTKFIKLFTSIRSITTTDSLFHHRFLTPLPSKPSLEPHAAASSAGFILWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V++ S QPTKGD+GAN ADDSALPP+W GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVEDESCQPTKGDIGANSADDSALPPQWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKDEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 351
           YHASLQKT GQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI
Sbjct: 241 YHASLQKTPGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 300

Query: 352 ADATALTQAS 359
           ADATALTQAS
Sbjct: 301 ADATALTQAS 310

[Close]

BLAST of HG10006954 vs. NCBI nr
Match: XP_023530366.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 7.8e-146
Identity = 270/309 (87.38%), Postives = 280/309 (90.61%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNT+F+ LFTSIRTITTTDSL HHRF TPLPSKPSL+ H AA  AG  LWFSQ
Sbjct: 1   MIPRFRVKNTKFLMLFTSIRTITTTDSLFHHRFLTPLPSKPSLEPHAAARSAGFILWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V+N   QPTKGD+GAN ADDSALPPRW GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVENEPCQPTKGDIGANSADDSALPPRWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKDEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 351
           YHASLQKT GQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI
Sbjct: 241 YHASLQKTPGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 300

Query: 352 ADATALTQA 358
           ADATALTQA
Sbjct: 301 ADATALTQA 309

[Close]

BLAST of HG10006954 vs. NCBI nr
Match: KAG7032437.1 (CLP protease regulatory subunit CLPX2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.7 bits (1358), Expect = 7.8e-146
Identity = 270/309 (87.38%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNT+FIKLFTSIR+ITTTDSL HHRF TPLPSKPSL+ H AA  AG  LWFSQ
Sbjct: 1   MIPRFRVKNTKFIKLFTSIRSITTTDSLFHHRFLTPLPSKPSLEPHAAARSAGFILWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V++ S QPTKGD+GAN ADDSALPP+W GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVEDESCQPTKGDIGANSADDSALPPQWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKDEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 351
           YHASLQKT GQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI
Sbjct: 241 YHASLQKTPGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 300

Query: 352 ADATALTQA 358
           ADATALTQA
Sbjct: 301 ADATALTQA 309

[Close]

BLAST of HG10006954 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.9e-74
Identity = 165/309 (53.40%), Postives = 204/309 (66.02%), Query Frame = 0


Query: 64  IKLFTSIRTITTTDSLLHHRF----STPLPSKPSLQHPAAAGLFLWFSQKRHSWK----- 123
           I  F S +TIT++ SLL   F    S   P    L  P++  L    S  R  W      
Sbjct: 7   ISRFVSRKTITSS-SLLSRSFRFLLSVDSPPHIPLLRPSSNTLIPSSSFSRRIWDSCSGG 66

Query: 124 ----GASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFYFR 183
               G  DYD+IR+DVNCPRCS QM VIF+NRPLS+T RE G+YQA+N C  CKTAFYFR
Sbjct: 67  GGGGGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFR 126

Query: 184 PFKLVPLQGTFIEIGRVKGA-RNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCGG 243
           PFKL PLQG+FIE+G+VKG   + DDD D+  S P    +    +D+            G
Sbjct: 127 PFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPRNWKIQGLRSDED-----------G 186

Query: 244 GDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIY 303
            D +    ESNG  K + ++ ++L TPKEI + LD+F++GQE AKKVLSVAVYNHYKRIY
Sbjct: 187 EDADEEEDESNGGDKEKQSV-IKLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIY 246

Query: 304 HASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIA 359
           HAS +K S      I++E+D+ + VEL+KSNVLL+GPTGSGKTLLAKTLAR+VNVPF IA
Sbjct: 247 HASRKKGSASESYNIDMEDDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIA 302

[Close]

BLAST of HG10006954 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-47
Identity = 130/289 (44.98%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 122 IRADVNCPRCSKQMPVIFTNRPL--------------SITGRETGVYQALNLCPNCKTAF 181
           +RA+ NCPRCSKQM ++F+NR                S  G +T  +Q++N CP CKTA+
Sbjct: 66  LRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSDSSGAGDKTN-FQSVNFCPTCKTAY 125

Query: 182 YFRPFKLVPLQGTFIEIGRVKGARNLDDDVDNG---------SSQPTKG----------- 241
            F P  + PLQGTFIEIGRV+       +             S  P +G           
Sbjct: 126 GFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKSTRKQQQHSKDPNQGFNYRNKLRSSF 185

Query: 242 -----DLGANYADDSALPPRW-------------NGSCGGGDGNLGSVESNGVQK-GEAT 301
                  GA   +D + PP               N S    D +      N V + G A 
Sbjct: 186 WDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVNASPSAVDTSPLPDAVNDVSRWGGAG 245

Query: 302 LEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYHASLQKTSGQGLLGIELEN 358
           L     TPKEI + LDKF++GQ  AKKVLSVAVYNHYKRIYH S++K    G     +++
Sbjct: 246 LGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKK----GSAAQPIDD 305

[Close]

BLAST of HG10006954 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-33
Identity = 83/133 (62.41%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 225 GSCGGGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNH 284
           GS  GG GN     S     G + L     TPKEI + L+KF++GQE AKKVLSVAVYNH
Sbjct: 130 GSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNH 189

Query: 285 YKRIYHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNV 344
           YKRIYH S QK S         +  D+++VELEKSN+LLMGPTGSGKTLLAKTLAR VNV
Sbjct: 190 YKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNV 249

Query: 345 PFTIADATALTQA 358
           PF IADAT LTQA
Sbjct: 250 PFVIADATTLTQA 262

[Close]

BLAST of HG10006954 vs. ExPASy Swiss-Prot
Match: Q1MQ78 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Lawsonia intracellularis (strain PHE/MN1-00) OX=363253 GN=clpX PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-26
Identity = 69/127 (54.33%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 231 DGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYH 290
           D  + S     V++   T+E QLLTP+EI E LD++++GQE AKK+L+VAV+NHYKR+++
Sbjct: 36  DACIASCNEILVRQELETVEEQLLTPQEIKERLDEYVIGQEEAKKILAVAVHNHYKRVFY 95

Query: 291 ASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIAD 350
           A            I  E+ D   VELEKSNVLL+GP+GSGKTLLAKTLA+++ VPF IAD
Sbjct: 96  AE----------KISSEHGD---VELEKSNVLLVGPSGSGKTLLAKTLAKILRVPFAIAD 149

Query: 351 ATALTQA 358
           AT LT+A
Sbjct: 156 ATTLTEA 149

[Close]

BLAST of HG10006954 vs. ExPASy Swiss-Prot
Match: A5WC69 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=clpX PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-26
Identity = 72/130 (55.38%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 231 DGNLGSVESNGVQKGEAT--LEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 290
           +G+L +V+S   + GE    L  +L TPKEI E LD +++GQE AKK LSVAVYNHYKR+
Sbjct: 44  EGDLNTVDS---EDGEVNTWLTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRL 103

Query: 291 -YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFT 350
              A L +   Q  LG      D+ +VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF 
Sbjct: 104 KVAAKLAEDKKQAKLGA-----DDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFA 163

Query: 351 IADATALTQA 358
           +ADAT LT+A
Sbjct: 164 MADATTLTEA 165

[Close]

BLAST of HG10006954 vs. ExPASy TrEMBL
Match: A0A5A7UKI0 (CLP protease regulatory subunit CLPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001330 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.5e-146
Identity = 268/311 (86.17%), Postives = 279/311 (89.71%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQHPAAAGLFLWFSQKRH 111
           MI RFR  NT FIKLFTSIRTITTTDSL HHRF TP+PSKP    P +A   LW SQKRH
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAA-PRSAVFTLWLSQKRH 60

Query: 112 SWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFYFRP 171
           SWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVYQALNLCPNCKTAFYFRP
Sbjct: 61  SWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRP 120

Query: 172 FKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCGGGD 231
            KLVPL GTFIEIGRVKGAR+LD D DN S+QPT+GD+GAN ADD ALPPR NGSCGGGD
Sbjct: 121 LKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGD 180

Query: 232 GNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYHA 291
            NLGSVESNGV K EA+L MQLLTPKEIS ALDKF+VGQE AKKVLSVAVYNHYKRIYH+
Sbjct: 181 DNLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVLSVAVYNHYKRIYHS 240

Query: 292 SLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADA 351
           SLQKTSGQG LG ELENDDNE VELEKSN+LLMGPTGSGKTLLAKTLARVVNVPFTIADA
Sbjct: 241 SLQKTSGQGSLGTELENDDNETVELEKSNLLLMGPTGSGKTLLAKTLARVVNVPFTIADA 300

Query: 352 TALTQASAFSG 363
           TALTQASAFSG
Sbjct: 301 TALTQASAFSG 310

[Close]

BLAST of HG10006954 vs. ExPASy TrEMBL
Match: A0A6J1F3X7 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439782 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.5e-146
Identity = 270/309 (87.38%), Postives = 280/309 (90.61%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RF VKNT+FIKLFTSIR+ITTTDSL HHRF TPLP KPSL+ H AA  AG  LWFSQ
Sbjct: 1   MIPRFSVKNTKFIKLFTSIRSITTTDSLFHHRFLTPLPPKPSLEPHAAARSAGFILWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V+N S QPTKGD+GAN ADDSALPPRW GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVENESCQPTKGDIGANSADDSALPPRWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKDEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 351
           YHASLQKT GQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI
Sbjct: 241 YHASLQKTPGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 300

Query: 352 ADATALTQA 358
           ADATALTQA
Sbjct: 301 ADATALTQA 309

[Close]

BLAST of HG10006954 vs. ExPASy TrEMBL
Match: A0A6J1KAD3 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492504 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 7.2e-145
Identity = 269/309 (87.06%), Postives = 281/309 (90.94%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RFRVKNT+FI+LFTSIR+ITTTDSL HHRF TPLPSKPSL+ H AA  AG  L FSQ
Sbjct: 1   MIPRFRVKNTKFIRLFTSIRSITTTDSLFHHRFLTPLPSKPSLEPHAAARSAGFILRFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V+N S QP+KGD+GAN ADDSALPPRW GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVENESCQPSKGDIGANSADDSALPPRWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKNEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 351
           YHASLQKT GQG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI
Sbjct: 241 YHASLQKTPGQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTI 300

Query: 352 ADATALTQA 358
           ADATALTQA
Sbjct: 301 ADATALTQA 309

[Close]

BLAST of HG10006954 vs. ExPASy TrEMBL
Match: A0A6J1EYR0 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439782 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.8e-143
Identity = 269/310 (86.77%), Postives = 279/310 (90.00%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQ-HPAA--AGLFLWFSQ 111
           MI RF VKNT+FIKLFTSIR+ITTTDSL HHRF TPLP KPSL+ H AA  AG  LWFSQ
Sbjct: 1   MIPRFSVKNTKFIKLFTSIRSITTTDSLFHHRFLTPLPPKPSLEPHAAARSAGFILWFSQ 60

Query: 112 KRHSWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFY 171
           KRHSWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVY ALNLCPNCKTAFY
Sbjct: 61  KRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYHALNLCPNCKTAFY 120

Query: 172 FRPFKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCG 231
           FRPFKLVPLQGTFIEIGRVKGAR+LD+ V+N S QPTKGD+GAN ADDSALPPRW GSCG
Sbjct: 121 FRPFKLVPLQGTFIEIGRVKGARDLDNIVENESCQPTKGDIGANSADDSALPPRWKGSCG 180

Query: 232 GGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRI 291
           GG G+LG VESNGV K EA    QLLTPKEISEALDKFIVGQE AKK LSVAVYNH+KRI
Sbjct: 181 GGHGSLGLVESNGVPKDEANSGRQLLTPKEISEALDKFIVGQEKAKKALSVAVYNHHKRI 240

Query: 292 YHASLQKT-SGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFT 351
           YHASLQKT   QG LGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFT
Sbjct: 241 YHASLQKTLVWQGSLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFT 300

Query: 352 IADATALTQA 358
           IADATALTQA
Sbjct: 301 IADATALTQA 310

[Close]

BLAST of HG10006954 vs. ExPASy TrEMBL
Match: A0A1S3CD89 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499373 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 3.0e-143
Identity = 263/306 (85.95%), Postives = 274/306 (89.54%), Query Frame = 0


Query: 52  MITRFRVKNTEFIKLFTSIRTITTTDSLLHHRFSTPLPSKPSLQHPAAAGLFLWFSQKRH 111
           MI RFR  NT FIKLFTSIRTITTTDSL HHRF TP+PSKP    P +A   LW SQKRH
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAA-PRSAVFTLWLSQKRH 60

Query: 112 SWKGASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFYFRP 171
           SWKGASDYDYIRADVNCPRCSKQMPVIF+NRPLSITGRETGVYQALNLCPNCKTAFYFRP
Sbjct: 61  SWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRP 120

Query: 172 FKLVPLQGTFIEIGRVKGARNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCGGGD 231
            KLVPL GTFIEIGRVKGAR+LD D DN S+QPT+GD+GAN ADD ALPPR NGSCGGGD
Sbjct: 121 LKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGD 180

Query: 232 GNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYHA 291
            NLGSVESNGV K EA+L MQLLTPKEIS ALDKF+VGQE AKKVLSVAVYNHYKRIYH+
Sbjct: 181 DNLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVLSVAVYNHYKRIYHS 240

Query: 292 SLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADA 351
           SLQKTSGQG LG ELENDDNE VELEKSN+LLMGPTGSGKTLLAKTLARVVNVPFTIADA
Sbjct: 241 SLQKTSGQGSLGTELENDDNETVELEKSNLLLMGPTGSGKTLLAKTLARVVNVPFTIADA 300

Query: 352 TALTQA 358
           TALTQA
Sbjct: 301 TALTQA 305

[Close]

BLAST of HG10006954 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease )

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-75
Identity = 165/309 (53.40%), Postives = 204/309 (66.02%), Query Frame = 0


Query: 64  IKLFTSIRTITTTDSLLHHRF----STPLPSKPSLQHPAAAGLFLWFSQKRHSWK----- 123
           I  F S +TIT++ SLL   F    S   P    L  P++  L    S  R  W      
Sbjct: 7   ISRFVSRKTITSS-SLLSRSFRFLLSVDSPPHIPLLRPSSNTLIPSSSFSRRIWDSCSGG 66

Query: 124 ----GASDYDYIRADVNCPRCSKQMPVIFTNRPLSITGRETGVYQALNLCPNCKTAFYFR 183
               G  DYD+IR+DVNCPRCS QM VIF+NRPLS+T RE G+YQA+N C  CKTAFYFR
Sbjct: 67  GGGGGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFR 126

Query: 184 PFKLVPLQGTFIEIGRVKGA-RNLDDDVDNGSSQPTKGDLGANYADDSALPPRWNGSCGG 243
           PFKL PLQG+FIE+G+VKG   + DDD D+  S P    +    +D+            G
Sbjct: 127 PFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPRNWKIQGLRSDED-----------G 186

Query: 244 GDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIY 303
            D +    ESNG  K + ++ ++L TPKEI + LD+F++GQE AKKVLSVAVYNHYKRIY
Sbjct: 187 EDADEEEDESNGGDKEKQSV-IKLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIY 246

Query: 304 HASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIA 359
           HAS +K S      I++E+D+ + VEL+KSNVLL+GPTGSGKTLLAKTLAR+VNVPF IA
Sbjct: 247 HASRKKGSASESYNIDMEDDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIA 302

[Close]

BLAST of HG10006954 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease )

HSP 1 Score: 191.8 bits (486), Expect = 9.5e-49
Identity = 130/289 (44.98%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 122 IRADVNCPRCSKQMPVIFTNRPL--------------SITGRETGVYQALNLCPNCKTAF 181
           +RA+ NCPRCSKQM ++F+NR                S  G +T  +Q++N CP CKTA+
Sbjct: 66  LRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSDSSGAGDKTN-FQSVNFCPTCKTAY 125

Query: 182 YFRPFKLVPLQGTFIEIGRVKGARNLDDDVDNG---------SSQPTKG----------- 241
            F P  + PLQGTFIEIGRV+       +             S  P +G           
Sbjct: 126 GFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKSTRKQQQHSKDPNQGFNYRNKLRSSF 185

Query: 242 -----DLGANYADDSALPPRW-------------NGSCGGGDGNLGSVESNGVQK-GEAT 301
                  GA   +D + PP               N S    D +      N V + G A 
Sbjct: 186 WDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVNASPSAVDTSPLPDAVNDVSRWGGAG 245

Query: 302 LEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNHYKRIYHASLQKTSGQGLLGIELEN 358
           L     TPKEI + LDKF++GQ  AKKVLSVAVYNHYKRIYH S++K    G     +++
Sbjct: 246 LGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKK----GSAAQPIDD 305

[Close]

BLAST of HG10006954 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X )

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-34
Identity = 83/133 (62.41%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 225 GSCGGGDGNLGSVESNGVQKGEATLEMQLLTPKEISEALDKFIVGQENAKKVLSVAVYNH 284
           GS  GG GN     S     G + L     TPKEI + L+KF++GQE AKKVLSVAVYNH
Sbjct: 130 GSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNH 189

Query: 285 YKRIYHASLQKTSGQGLLGIELENDDNEIVELEKSNVLLMGPTGSGKTLLAKTLARVVNV 344
           YKRIYH S QK S         +  D+++VELEKSN+LLMGPTGSGKTLLAKTLAR VNV
Sbjct: 190 YKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNV 249

Query: 345 PFTIADATALTQA 358
           PF IADAT LTQA
Sbjct: 250 PFVIADATTLTQA 262

The following BLAST results are available for this feature:

BLAST of HG10006954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876518.1	2.1e-151	90.68	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Benincasa hispi...	[more]
XP_038876517.1	2.1e-151	90.68	CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 [Benincasa hispi...	[more]
KAG6601668.1	3.5e-146	87.42	CLP protease regulatory subunit CLPX2, mitochondrial, partial [Cucurbita argyros...	[more]
XP_023530366.1	7.8e-146	87.38	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucurbita pepo ...	[more]
KAG7032437.1	7.8e-146	87.38	CLP protease regulatory subunit CLPX2, mitochondrial [Cucurbita argyrosperma sub...	[more]

BLAST of HG10006954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K7F6	2.9e-74	53.40	CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q66GN9	1.3e-47	44.98	CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q9FK07	1.4e-33	62.41	CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q1MQ78	1.0e-26	54.33	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Lawsonia intracellularis ...	[more]
A5WC69	2.9e-26	55.38	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Psychrobacter sp. (strain...	[more]

BLAST of HG10006954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKI0	6.5e-146	86.17	CLP protease regulatory subunit CLPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1F3X7	6.5e-146	87.38	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 OS=Cucurbita mos...	[more]
A0A6J1KAD3	7.2e-145	87.06	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 OS=Cucurbita max...	[more]
A0A6J1EYR0	1.8e-143	86.77	CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 OS=Cucurbita mos...	[more]
A0A1S3CD89	3.0e-143	85.95	CLP protease regulatory subunit CLPX2, mitochondrial isoform X3 OS=Cucumis melo ...	[more]

BLAST of HG10006954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49840.1	2.0e-75	53.40	ATP-dependent Clp protease	[more]
AT1G33360.1	9.5e-49	44.98	ATP-dependent Clp protease	[more]
AT5G53350.1	1.0e-34	62.41	CLP protease regulatory subunit X	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF07724	AAA_2	coord: 317..356 e-value: 9.4E-6 score: 25.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 246..362 e-value: 4.3E-36 score: 126.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 253..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..225
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 123..358
None	No IPR available	PANTHER	PTHR48102:SF9	ATPASE, AAA-TYPE, CORE-RELATED	coord: 123..358
None	No IPR available	CDD	cd00009	AAA	coord: 318..362 e-value: 7.19582E-7 score: 46.3703

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006954.1	HG10006954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding