HG10006951 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006951
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	survival of motor neuron-related-splicing factor 30
Location	Chr07: 23551409 .. 23559997 (+)
RNA-Seq Expression	HG10006951
Synteny	HG10006951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCCACCTACAAAGACCAGCTTCAGCAGGTACTCCTCTTCGCCATTTCTTTCTGGCTAACAATCCGCTCATTCTTTTCTTTTCTTCCTTTTTTTATGATTTTGTTTCAGTTACTGGGGTTCTCTTTTTTCAAATTTATTCAAAGCAAAATTGGATATTTATGATCTTGTAAACCTTTGCCGCTGTCATTCTTGAGTTCTTCCCAGTAGTTTGTATCTGAATTAGGGGTTTGCTCACCACCTTGGACTATTGCGGTGCTAAGTTGCAGCGAATCCGGAGGAAATGGAACCTGTATTGGATAATTGCATTAAACCTAGAAATTTAGAACCTAATCCACATATAATTGCATTAAACCTAGAAATGTAGAACTTAATCCACATAAGTTAGTATCAAGATTCTTTCTAGGACTTTCCAGTTTAATGAGGTTTTATCTGTCCTTTTTTATTTTTTTATTTTTTTATTTTTTACACTTAGGATACTGAAAATCTTGAGCAGGGTTTAAGCATCTGAATGATTTTTACATTTGTATGGCGAATTCTTAATTGTCAGTCACTTCCTCTACCTAACTACATGAATTCTTGGCTTCCTCACTTTGTTTCATTTTGTATATAAGTTTCTGGGTAAAATAACTTCTTTCTATCCTGATCCAGGTCAGACAGCTGTTAGATGATGATCCTAGCAACTCTGAATACATCGATATGGAAAAGGAGCTTGAAGAGGTAGTTTGTTTTTGTCCTCCTAGTATGCCCATCCTTCCTTGTGAACTCGTCGCATGTGTATGGTTTAGCACTCTTCATATTCCCGCTGAATGTATTATTAGGTTCAGCTTCTGCTGTAGCACTAAGGATCAGAGAACGCTCAGAACTATTATTTTTATTACGTGGGTTTCCAGTCAAGTTTGCTTTCTTTCTTTTGTTTGTCTTCCTTTTTCCTTCTAAAGGAATCATGTTGTTGAAATAAGAAAGAGGTATGGCCCCTGTGGAGATTGTCATTTTCATTTTTGGGAGGAAAAGGTGAGGGGGTTGTATCTTTCATTTATGTGCTCCAGAGCTCTAATCTCTGGTCATAAATGATCATTATTGGATATGTGTGAAAATTTGAAACTTCATCAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATATTCGTGATGGCCAGTCTGCTCTTCCCCTGACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTATTTCTTTTTTTTTTTTCTTTTTTTTTTGGGGACAAATACCTGCTCTTTATGAAATTTACCGTTGGAGATATATTTTAACAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACAGGTGATGACAGCGCATCAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGTAAGTTCACATTTGTCCTCAGTTTGCACATTGCGTTTCTCTGCTGGAAGCAACATAATGTTATAGATGGTTATAGCTTTAGATTTAACGCACACTGCTTGGATTTCTGTGTGGTTCGTTGTATATGTTGGTATTGTTTTTGTGTACGTGCTCACATGTGCAACTGCAAACACATTTGTGTTTGTGTTTTGAAGGCTTAATATCTTTTCCTTATTTGGAAGCATACCTCGTAACCATTTACTGGCATGTGGTTTTGTTTCATAATCTGAAAGACAATGTCCTTGAACACAACACTGAAAACCCACTAAAGATTGGACATGGAGAACAACTTCCACCACAAGCCTTTGAATATCAACAACCAAAGGAGAGATGTTGGGACCCATCATTATCCGCCAAATGAGAGGGCAAATTGAGGGTAACAAACAATGAGAAGGAAACTTTCTTTGGAGTGTAAGAGAGCAGTTGAGAGCTCCAAAGATCATAACCCAAATAATGAGGTTTACTCGACGAGGGCATTTTGATTTCCATAGAGCTTTGTAAAGAAGTTTATACATTGAAGTAGATGCCGACAAGTGCTTGTAAAGAGATTTAACTGAAAACAAACCTGAAGACTCCAACTTCCAACTTCTTGAATCTGGGCGATCAAGAACTGTTCGGCCTTTTGAAGAACCCAATAAAATATGAAAATCCAAAGCTTTCTCATCCTTTAAAAACCGTTTAAAAGAGATAGACAAAGAGAGAGTGGTTGCATCCCACTACTCCACTGCTGAACCATTTGGATTAGTAGAAATCCTTAGAAGACTTGGGAATAAAGATCCCAAATTAGAATTATCCAACCATGGGTCATGCCAAAAAGAGATCCTGCTGCCATTTTCAAGTTTAAACAAAGCAAGAGAATCCTAAGTCTAACCCTTTGGAGGGCTTCTCTTGTAAGTCGTTCTTGTCATTTGATATTTTATGGAAGATTAAGATTCCAAAGAACGTCAAGTTCTTTTCTTGGAAAGTTTTGCTTGGTCGTGTGCAGTGTTTTAAAAAGCCTTCCCGGACATATGCCTAGGCGCGCCTAGACTCAAGGCACAAGTCTTTCGCCTCTCCAAGTAACCAAGTTGCCCCATTCATTTTTTTCATAAGATGCAAATTTTATTGATGTATAAAACTTACAAAAGAGGGTGAAGCCCTAACCAAAAGAGTTACAAAATATTTCTCAAATTGGTTAAAAGAGAGGTGCATGTACTCCAAGACATAGCAAGGAGAAGAATATGATCAAATAAACTATCGAAGGTGCTTTCGTATCTTGAAGGAGGAGGTTGTTGTGCTCTTTCCAAGTTGTCCACAAAAAACTCGAATTAGATGCATCCAAAGGATTCTTTTTCCCTCTGTAAATGGGCGGCCAAAGAGTAATTGAGCAAAATGTTGATATCACTACAAATTATGGGTTCCATCTAAAAGCAACAATCAATTCTTTCCTAAATTTGTTGGCAAACTGGCATTTGATGATGAAGTGTCTTTGAGAAAGGGTGATAGAGGACCCACCTTGACGAAGGCCTCTGGTGGCTAAGATCTTACCTTCAGGGCGGCCATTGATAATTATGGAGAAGTTTGTTCATGAAATGCACTCCCTTAGATATCTTCTCCATGTTGAACCAAATCCCTTGGCATTGTGGATTAAATCAAGGAAATCCCAATCCACTTTGTCATAAGCCTTTTCAATGTTAAGCTTAACCACATTGTCATTTCTTTTCGTTTTGTGATATTCATCGATGGTTTTGTTGGCAACCAAGGATGTATAAAGAATTTGTCTTCCCTCCACATATCCACAATACCTGATACATCCTTGATTGCCAACACTCTAACACTCTCACTTACTTGTGATCTGTTTGGATACTCCTTACTATGATTCCAAAATAACGAACAACGATTACAAGTTCCAAAGTAAATTACAAACTATCTTAAAAACAAAGAGAAAGTAAAGGATAACCCTAGCCAATTTCGGAGGGCTGGTATCTCTTCCAAAAAGGCTTTAACAGTCCTTTTCAACCAAAATGAGCATAGCTCAATTGGCATTCGAGAGTATTAGTAACTACGAGGTTTGTGGTTCGAATTTCCCAACTCCCAAGTGTTGTATTGAAAAAAAAAAGTTATTTTCTACAAAATCCCAGATAGCGGCTCCCTCACCCCTTCCCCAAACACTATAATGACATTCTCTCGCATTCGTACATGGTTACACGATTGAACCACATATTGTCTTGGGTGAAGTACCCTTCTTACCTCTCCTCATATATACTTTCTTAACCAGAGGCCTAAGACGATCATCTTTTTAAATTGAGACCTTAGAAGCACAAACACAAATATGGATAAGGAACATAGATAAGACAGGACATGACGATGCATCAGTTTCTAAAAAACTAGGATACAAATATGTTGGGGATACACTATGTAAATATATTTTCAATTTTTTAAAAATATATATATGTAAATTTAACAAAAAGATACAAATACTAAATGAAATCCACTCAAAAGTGTTTAATAGCTTACGAAAACTAACTAGTAAGTTGAGGAAATAAAGAGATTAAAAAAACATGTAATGTACTGTAGTTTGCAGACCATCCACAAGAAAAAGAAATTATTTGAAAAAAAAAGTTGCATTTAATGCTTGGCAGCAAAGAAGTACTCAATCAAATTTAAATAATATTTTATTATTATTTAATTTATTCCATTCACATATTTCAATGTGAGGCTTTTCATTTTTTTAATATTCTCAAGTGTTCGGACTAGTTTGCGCGCACCTCGACTAGTCTCACCCTCGCTCTTCAACATGTTGGCACCAAGGAAACTCATAGGATATTTAGTTCTAGGTAGGTGGGTACGATAGATTGAACTCATTCCCTTTAAGTTCTTTATTGAACCTATGGCCCTTATTGGTGGGCACTATGTCAACCCATGGTGGTTGTGAGGCTTCTCATTTTCGTTTTCTATTCTTTCTTCTTCCACACTCCACTCCATTTCGTTTTTGTACATTGAGACCACTCTCCATCTCTTTTTCCAAACTCCTCCTTTTTCTATTCTTCCATTTTTTCCCTTTATTTCAGCCGTGCTAATCTTTGGCATTTTTTTCCATTTCCAAACTCTCCACTCTTCTTCTCTGGTTGTTTGGTCCACACTAATTGTCGGTATTTTTAGTTTCATTTTTCATTTTCTATTTTACGGATGTTTTTGAATGTGGCTGGGCTTTCTTCCTTCCTTTAAAATTTTCTTCAACATGTCCATCAATGTGTCCTAATGTATCTCCAGCATGCTGGAAATTCTAAAAAGAAAGTGGGACACATAAAGTTGCACATCGGAGATGTGTCTGGACGTATCCTTGTCCACTATTTTACCACTTTCGGCTTTCACCATTTTCACTCCACTGTATGCTCACCTTCAAATTAGCCTCCACTTGACAATCTCTGTCCCTGAAGCAGCAACCAAAATTACGTGTTCTATTCTTTTCCTTTCACCCCTATAAGCTAAGGAAGGAGGGGCCAACATTATTATTTTTTGCCCCTTTCAATCGGGAACCTTGCTGTCACCGTCAGCCACCTACTGATGTTGTTGGTAGTTGTTCCCCTCTATGGTAGATGTGCACTTCCCATAATAAGTCTCAGACTAATTTGGTATAGGGGTAACTCTTTTGGTGGAACACTTTTTTCCCCCTCAAATGTCTTGTTAGTTTTTATCTGACCTTATTGTGTTCTATTATTTGAGAGTTACATGGACTGTTAAATCTGAAAAAATTATATCAAGTATAAGCAATAATGATCCTATTTTCAAGCATTTGCATTCCCATTCCCGCGTACCGAAAGCCAACAGTGGTATCAGTGTAATGTCTACTATTAAACATTTAATTGCTTTTACTTGGGTCAATCTTTCAAAGCCTTTCGTAACTACCCTTTGTTTTCGTTCTCAGCCAATTGGATAGCCTTTTGTTATTTATTCATTTTTATTTTGTCTCTGGAGGATTCCTAATTCTCCTTTATTTCTCTGTACCTCTCTTTTTAAATTTTAAGACATACTGCAAAGAACAATTAGAATGGTTTGACATGGAAGCAGTACCACTCAAGAGACTTCATAAATTGCTTGGCAGTTGAATCAACCACCTTCCTTTGAATTGTATTTCAATATTTTATGCCATTCATGTACGTAATGCTTACATGGAAGCGTGTGTTGAGATGTTTAGTGATCTAATATTCTATGTTCTTGGTATGCAGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTGAGTAAAAAAATGGAGAAAATTTACAACCCTACTTAAACAGAACAGGTTGTACAGCTGTGCCCTTGGGTTCTAAAAAAGGAATTTTATCCTCCAACTTATTCTCTTTTTAATTAGAAAAGAGACGTTGAAGATAAATGGTGTTTGAAAGAGATGTGTGCTTGAAAGTTTACGAATTACTGGGGCATGTACTTGAGAGTATTGAAAGGACTCTAGTGCCAAAATTATCTGTGAGCATGGAGGGGTTGTGTTTTTTGTTTTTGTTTTCATTGAGATTTTGACTATCCAATATAAGAAGCTGTGACATTTCCATAAAGTTAGTTTTGCAAAATGGATGTTAATGAAAATCAGGTTATTGTTCTACTATGACAGCAGCTAAGCTGCCTCAAAATTGGCCAAACTTTGTAAATTTATTTCATTAATTCCTCTTAAAGAAAAACCTTAGCGTCTTTGTAGAGAAAAATGGGATGAAAAAACATGTAAATTTAGAGTTTGTTTAAACCAATTTGATACCACCATGACTATAATAGCCATTCCCTTTGTGAAAATTATGAACCTAAACTCGTCTTCATCTCTCTCCTCCAGTTTTCAGTTCATTGTGTCTGTTCAGTAAGGAGGGTTGGTCCCTAGTCAGGTTTAATGCGTCTCTTTGACCTTTAATTACTGAAGAGTTGTATAACGTTTCGCGCGATCTTACTTTTTAGATTAGAGCCCCTTTCTGCATAGCTGGTTCTTTGAGGTTCCCTTTCTCGGGCCATTTTTTATATGCCGCTCTTGTTCTTTCATGTTTCTTAATGTAACCATTTTTTATTGTAAAAAGATTTTCTGTTCAGCTATCTTGTTTTGAGCCTTCGAAGTAACACCTTCACCTGGTCTCTTATCAAAATGAATGATAAGTCTATGAGAATAAGTCTTAGTCCGTTGAAGCTGATTTTAGTTTCTAGGTCTCCAAGCATATACTAATTTTGTTGATGGACGCATTTTTTTACTTCTCTTAGCTTCAATGTTTTCTGCCATCTTCTTTGAAGCTTTGGTTTTTTTCCCTTTTTGTTTAACTACTTTTCCTTCGACTGTTTTTCTAATAGAAACAAAAATTTTCCCTTGATTGTGTTCAATTGTATGAATACTCAGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTTTGATGGTTGGGGAAACAAGGAAGAGGTAAGGTTTCTACACCTGCAGTTTGCATGACTGTTTTGATTATTTTTAAGAGTGTTATCTTTTATCAAGGAAAAAAAAGAGTATTCTAGTATTTCTTCAAAAAGATCTGGGGCTGATTCTCTCTAAATTAACTAGAAATGTGAGGAATTGGTTCTTGGTTTGTAAATACGGGACATTTCCCTTTGGATGGGTTCAATCCGTAGGATTTAGGACTAAAATCGTATGTAATAATTCTTGGAAGGCCATCTTCGTTGGTTTTGTTTGTTGGATTAGCTGGTATAAATACCACGGTTTCCTCTTTGTAAGACTTGATTGAAGATTACTAAAATTTTTGCATTTTGGTTTACTCTAGTTTGCCTAGAAAACTCATAGGTATCTTGAACTCATTTTCTCTAAACTCTTTGTTATTTATATTGGCCCTAATTATTACTAGGCCAATAACTAATAAGGTATTGTTTCTTTTTGAAAAGAAAAAAGGGGGAGGCAACTGCAAGTACAAGAAGAGTAAGCATGAGGGAGAGCTCAATGAAGTTTAGGAGTTCGAATCATAATATACATATTTATGAAGTTTAGGAGTTCTATACACACACACATACGTATTACGCACTTTAAGTACATACACACATATACCTTTTAAATGGAACTATTGGCCTTTTTCTTAAGTAGTGAGTCAGTTGCACCAATTGTCAACAGTTATGATATCTACTAATTTTAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAGTAAGTAGTTAATAATCTTAATATTTCATGACCACTAATTTATTAATCTAGTAATTAGTTTGGTATTTAAGACATTTATAAGTGCATTTGTTTTGTATCTCTGGTGTTTGTATAGAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGGGTAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGCAAGTCTAAGAAGGTAAGTCTTGTGGAATCTAGCATTTTGTTGAATATTCATGTGTTTTATAAAGAGGCCCTACAGGTATAAGGGAAAACCCCAAGGCCAAAGGATGTTTTTGAAAAGTACTTCAATTTACATTAATCAAAACAGAATAATAATAGCTAGAAGGGTTTAAGAGGAGATATCCTTGCAATTGCATTTTTCCTCTTCGGCACCATCTGATGACGATTAATAAATATGAATTCTCAGATTGGTTTCTTCTCTGGGCGAAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCGAATGGCAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTAACCGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGACTAA

mRNA sequence

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCCACCTACAAAGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGATCCTAGCAACTCTGAATACATCGATATGGAAAAGGAGCTTGAAGAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACAGGTGATGACAGCGCATCAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTTTGATGGTTGGGGAAACAAGGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGGGTAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGAAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCGAATGGCAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTAACCGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGACTAA

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCCACCTACAAAGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGATCCTAGCAACTCTGAATACATCGATATGGAAAAGGAGCTTGAAGAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACAGGTGATGACAGCGCATCAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGAAGCTGGAAGCATGTCTGATTATCACGAGAAATTTCCTATTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTTTGATGGTTGGGGAAACAAGGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAAGCTTCGAATTGAACCTGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGGGTAGAACAGCTTGAAGTTACCCAAAATAAACGGCAGAATGCTTGGCAGCAGTTTCAATCAGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGAAAGAGGGAGAGCATTTTCAAGTCTCCGGATGATCCGAATGGCAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTAACCGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGACTAA

Protein sequence

MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD

Homology

[Close]

BLAST of HG10006951 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 294/323 (91.02%), Postives = 303/323 (93.81%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  KHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSD 120
             WTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQ K N+MEA SM D
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMCD 120

Query: 121 YHEKFPIGSKVQAVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVN 180
           YHEKFPIG+KVQAVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVN
Sbjct: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180

Query: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS 240
           ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKS
Sbjct: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS 240

Query: 241 KMRVEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK 300
           KMR+EQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGK
Sbjct: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK 300

Query: 301 GLTEFQKREKHLHLKGATVEMDD 312
           GLTEFQKREKHLHLKGA+VEMDD
Sbjct: 301 GLTEFQKREKHLHLKGASVEMDD 323

[Close]

BLAST of HG10006951 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154
Identity = 291/311 (93.57%), Postives = 295/311 (94.86%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VIALTEELLSTAKQNEI GSNVETGDDSASISF QPKENEMEAGSMSDYHEKFPIGSKVQ
Sbjct: 61  VIALTEELLSTAKQNEIPGSNVETGDDSASISFHQPKENEMEAGSMSDYHEKFPIGSKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVR IQLEVNALLEAER+AEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGATVEMD+
Sbjct: 301 HLKGATVEMDE 299

[Close]

BLAST of HG10006951 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 4.4e-153
Identity = 287/311 (92.28%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELANNLSTYKDQL QVRQLLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VIALTEELLSTAKQNE+SGSNVETGDDSASI FQQ KENEMEAGSMSDYHEKFPIG+KVQ
Sbjct: 61  VIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVN LLEAER+AEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQ+AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQTAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGATVEMD+
Sbjct: 301 HLKGATVEMDE 299

[Close]

BLAST of HG10006951 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545.8 bits (1405), Expect = 2.4e-151
Identity = 285/311 (91.64%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VIALTEELLSTAKQNEISGSNVETGDDSASISFQQ K N+MEA SMSDYHEKFPIG+KVQ
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGA+VEMDD
Sbjct: 301 HLKGASVEMDD 299

[Close]

BLAST of HG10006951 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148
Identity = 282/311 (90.68%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELA+NLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VI+LTEELL+TAKQNEISGSNVETGD+SASISF Q KE +MEA S+SD+HEKFPIGSKVQ
Sbjct: 61  VISLTEELLATAKQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+D WGNKEEVDPANVR IQ EVNALLEAERMAEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGATVEMDD
Sbjct: 301 HLKGATVEMDD 299

[Close]

BLAST of HG10006951 vs. ExPASy Swiss-Prot
Match: Q6DEY1 (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 91/297 (30.64%), Postives = 137/297 (46.13%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELL 69
           E+LA  L+ YK QLQQV   L  +  N + + ++K+L+E            VI LT++LL
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQE------------VIELTKDLL 62

Query: 70  STAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEW 129
           S+           ET DD+         ++   +GS S     + +G K  AVWS+DG+W
Sbjct: 63  SSQPS--------ETADDAC--------DDMSASGSQS-----WKVGEKCMAVWSDDGQW 122

Query: 130 YDATI-EAHTVNG-FYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRK 189
           Y+A I E    NG   ++F G+GN E     N+R ++       E  +  E         
Sbjct: 123 YEAEIEEIDEENGTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE--------- 182

Query: 190 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKR-KKIHAFKSKMRVEQLEVTQNKRQNAW 249
                     S NLP   +      E + A +  KK  A K   R+++LE  +  ++  W
Sbjct: 183 ---------DSGNLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKW 230

Query: 250 QQFQS-AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 300
           QQF + A  K+KK     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 QQFNNKAYSKNKK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of HG10006951 vs. ExPASy Swiss-Prot
Match: O75940 (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.8e-15
Identity = 88/296 (29.73%), Postives = 134/296 (45.27%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELL 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+E            VI LT++LL
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQE------------VIELTKDLL 62

Query: 70  STAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEW 129
           ST     ++ S+        S +  QP  +             + +G K  AVWSEDG+ 
Sbjct: 63  STQPSETLASSD--------SFASTQPTHS-------------WKVGDKCMAVWSEDGQC 122

Query: 130 YDATI-EAHTVNG-FYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRK 189
           Y+A I E    NG   ++F G+GN              EV  LL  + + E  K      
Sbjct: 123 YEAEIEEIDEENGTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK------ 182

Query: 190 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNKRQNAWQ 249
               A  D  ++ +  K  I        +  + KK  A K   R+++LE  +  ++  WQ
Sbjct: 183 ----AKEDSGNKPMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQ 230

Query: 250 QFQS-AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 300
           QF + A  K+KK     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 QFNNRAYSKNKK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of HG10006951 vs. ExPASy Swiss-Prot
Match: Q5R591 (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14
Identity = 87/296 (29.39%), Postives = 134/296 (45.27%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELL 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+E            VI LT++LL
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQE------------VIELTKDLL 62

Query: 70  STAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEW 129
           ST     ++ S+        S +  QP  +             + +G K  A+WSEDG+ 
Sbjct: 63  STQPSETLASSD--------SFASTQPTHS-------------WKVGDKCMAIWSEDGQC 122

Query: 130 YDATI-EAHTVNG-FYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRK 189
           Y+A I E    NG   ++F G+GN              EV  LL  + + E  K      
Sbjct: 123 YEAEIEEIDEENGTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK------ 182

Query: 190 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNKRQNAWQ 249
               A  D  ++ +  K  I        +  + KK  A K   R+++LE  +  ++  WQ
Sbjct: 183 ----AKEDSGNKPMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQ 230

Query: 250 QFQS-AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 300
           QF + A  K+KK     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 QFNNRAYSKNKK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of HG10006951 vs. ExPASy Swiss-Prot
Match: Q3T045 (Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14
Identity = 89/296 (30.07%), Postives = 135/296 (45.61%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELL 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+E            VI LT++LL
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQE------------VIELTKDLL 62

Query: 70  STAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEW 129
           ST     ++ S     D+ AS    QP  +             + +G K  A+WSEDG+ 
Sbjct: 63  STQPSETLASS-----DNFAS---TQPTHS-------------WKVGDKCMAIWSEDGQC 122

Query: 130 YDATI-EAHTVNG-FYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRK 189
           Y+A I E    NG   ++F G+GN              EV  LL  + + E  K      
Sbjct: 123 YEAEIEEIDEENGTAAITFAGYGN-------------AEVTPLLNLKPVEEGRK------ 182

Query: 190 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNKRQNAWQ 249
               A  D  ++ +  K  I        +  + KK  A K   R+++LE  +  ++  WQ
Sbjct: 183 ----AKEDSGNKPMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQ 230

Query: 250 QFQS-AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 300
           QF + A  K+KK     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 QFNNRAYSKNKK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of HG10006951 vs. ExPASy Swiss-Prot
Match: Q8BGT7 (Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 87/296 (29.39%), Postives = 133/296 (44.93%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELL 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+E            VI LT++LL
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQE------------VIELTKDLL 62

Query: 70  STAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEW 129
           ST     ++ S+        S +  QP  +             + +G K  AVWSEDG+ 
Sbjct: 63  STQPSETLASSD--------SFASTQPTHS-------------WKVGDKCMAVWSEDGQC 122

Query: 130 YDATI-EAHTVNG-FYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRK 189
           Y+A I E    NG   ++F  +GN              EV  LL  + + E  K      
Sbjct: 123 YEAEIEEIDEENGTAAITFAVYGN-------------AEVTPLLNLKPVEEGRK------ 182

Query: 190 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNKRQNAWQ 249
               A  D  ++ +  K  I        +  + KK  A K   R+++LE  +  ++  WQ
Sbjct: 183 ----AKEDSGNKPMSKKEMI-------AQQREYKKKKALKKAQRIKELEQEREDQKVKWQ 230

Query: 250 QFQS-AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 300
           QF + A  K+KK     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 QFNNRAYSKNKK-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of HG10006951 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.2e-151
Identity = 285/311 (91.64%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VIALTEELLSTAKQNEISGSNVETGDDSASISFQQ K N+MEA SMSDYHEKFPIG+KVQ
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGA+VEMDD
Sbjct: 301 HLKGASVEMDD 299

[Close]

BLAST of HG10006951 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.2e-151
Identity = 285/311 (91.64%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VIALTEELLSTAKQNEISGSNVETGDDSASISFQQ K N+MEA SMSDYHEKFPIG+KVQ
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGA+VEMDD
Sbjct: 301 HLKGASVEMDD 299

[Close]

BLAST of HG10006951 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.0e-149
Identity = 282/311 (90.68%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELA+NLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFPIGSKVQ 120
           VI+LTEELL+TAKQNEISGSNVETGD+SASISF Q KE +MEA S+SD+HEKFPIGSKVQ
Sbjct: 61  VISLTEELLATAKQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQ 120

Query: 121 AVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEAT 180
           AVWSEDGEWYDATIEAHTVNGFYVS+D WGNKEEVDPANVR IQ EVNALLEAERMAEAT
Sbjct: 121 AVWSEDGEWYDATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEAT 180

Query: 181 KQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQN 240
           KQAIKRKIAQAASVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQN
Sbjct: 181 KQAIKRKIAQAASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQN 240

Query: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 300
           KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL
Sbjct: 241 KRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHL 299

Query: 301 HLKGATVEMDD 312
           HLKGATVEMDD
Sbjct: 301 HLKGATVEMDD 299

[Close]

BLAST of HG10006951 vs. ExPASy TrEMBL
Match: A0A1S3CD96 (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.0e-140
Identity = 257/263 (97.72%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 49  KHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSD 108
           KHWTWAKVAVMQVIALTEELLSTAKQNE+SGSNVETGDDSASI FQQPKENEMEAGSMSD
Sbjct: 12  KHWTWAKVAVMQVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSD 71

Query: 109 YHEKFPIGSKVQAVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVN 168
           YHEKFPIG+KVQAVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVN
Sbjct: 72  YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 131

Query: 169 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS 228
           ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS
Sbjct: 132 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKS 191

Query: 229 KMRVEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK 288
           KMR+EQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK
Sbjct: 192 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGK 251

Query: 289 GLTEFQKREKHLHLKGATVEMDD 312
           GLTEFQKREKHLHLKGATVEMD+
Sbjct: 252 GLTEFQKREKHLHLKGATVEMDE 274

[Close]

BLAST of HG10006951 vs. ExPASy TrEMBL
Match: A0A1S3CE07 (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 246/257 (95.72%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 55  KVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHEKFP 114
           K  + +VIALTEELLSTAKQNE+SGSNVETGDDSASI FQQPKENEMEAGSMSDYHEKFP
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 72

Query: 115 IGSKVQAVWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAE 174
           IG+KVQAVWSEDGEWYDATIEAHTVNGFYVS+DGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 73  IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 132

Query: 175 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQ 234
           RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMR+EQ
Sbjct: 133 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 192

Query: 235 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 294
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 193 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 252

Query: 295 KREKHLHLKGATVEMDD 312
           KREKHLHLKGATVEMD+
Sbjct: 253 KREKHLHLKGATVEMDE 269

[Close]

BLAST of HG10006951 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 368.2 bits (944), Expect = 6.4e-102
Identity = 198/310 (63.87%), Postives = 242/310 (78.06%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHE-KFPIGSKVQA 122
           ALTEE+L+TAKQNEIS S+     ++   S       E         HE KFP+G+KVQA
Sbjct: 64  ALTEEVLATAKQNEISLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQA 123

Query: 123 VWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATK 182
           V+S+DGEWYDATIEAHT NG++V++D WGNKEEVDP NVR I  E NA++EAER+A+ATK
Sbjct: 124 VFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATK 183

Query: 183 QAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNK 242
            A+KRKI +AAS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK
Sbjct: 184 NALKRKIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNK 243

Query: 243 RQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLH 302
           +QN WQQFQ+ K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLH
Sbjct: 244 KQNDWQQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLH 299

Query: 303 LKGATVEMDD 312
           LK    E  D
Sbjct: 304 LKSGNAEGTD 299

[Close]

BLAST of HG10006951 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 368.2 bits (944), Expect = 6.4e-102
Identity = 198/310 (63.87%), Postives = 242/310 (78.06%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHE-KFPIGSKVQA 122
           ALTEE+L+TAKQNEIS S+     ++   S       E         HE KFP+G+KVQA
Sbjct: 64  ALTEEVLATAKQNEISLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQA 123

Query: 123 VWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATK 182
           V+S+DGEWYDATIEAHT NG++V++D WGNKEEVDP NVR I  E NA++EAER+A+ATK
Sbjct: 124 VFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATK 183

Query: 183 QAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNK 242
            A+KRKI +AAS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK
Sbjct: 184 NALKRKIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNK 243

Query: 243 RQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLH 302
           +QN WQQFQ+ K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLH
Sbjct: 244 KQNDWQQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLH 299

Query: 303 LKGATVEMDD 312
           LK    E  D
Sbjct: 304 LKSGNAEGTD 299

[Close]

BLAST of HG10006951 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 368.2 bits (944), Expect = 6.4e-102
Identity = 198/310 (63.87%), Postives = 242/310 (78.06%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHE-KFPIGSKVQA 122
           ALTEE+L+TAKQNEIS S+     ++   S       E         HE KFP+G+KVQA
Sbjct: 64  ALTEEVLATAKQNEISLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQA 123

Query: 123 VWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATK 182
           V+S+DGEWYDATIEAHT NG++V++D WGNKEEVDP NVR I  E NA++EAER+A+ATK
Sbjct: 124 VFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATK 183

Query: 183 QAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNK 242
            A+KRKI +AAS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK
Sbjct: 184 NALKRKIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNK 243

Query: 243 RQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLH 302
           +QN WQQFQ+ K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLH
Sbjct: 244 KQNDWQQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLH 299

Query: 303 LKGATVEMDD 312
           LK    E  D
Sbjct: 304 LKSGNAEGTD 299

[Close]

BLAST of HG10006951 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 342.8 bits (878), Expect = 2.9e-94
Identity = 188/310 (60.65%), Postives = 232/310 (74.84%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGDDSASISFQQPKENEMEAGSMSDYHE-KFPIGSKVQA 122
           ALTEE+L+TAKQNEIS S+     ++   S       E         HE KFP+G+KVQA
Sbjct: 64  ALTEEVLATAKQNEISLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQA 123

Query: 123 VWSEDGEWYDATIEAHTVNGFYVSFDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATK 182
           V+S+DGEWYDATIEAHT NG++V++D WGNKEEVDP NVR I  E NA++EAER+A+ATK
Sbjct: 124 VFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATK 183

Query: 183 QAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRVEQLEVTQNK 242
            A+KRKI +AAS D+Q++ LP+KL+I+P+DPEDVK  KRKKIH            V QNK
Sbjct: 184 NALKRKIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNK 243

Query: 243 RQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLH 302
           +QN WQQFQ+ K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLH
Sbjct: 244 KQNDWQQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLH 287

Query: 303 LKGATVEMDD 312
           LK    E  D
Sbjct: 304 LKSGNAEGTD 287

The following BLAST results are available for this feature:

BLAST of HG10006951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032438.1	5.0e-157	91.02	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]
XP_038876515.1	1.0e-154	93.57	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_004142808.1	4.4e-153	92.28	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_022933076.1	2.4e-151	91.64	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
XP_022155149.1	1.4e-148	90.68	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]

BLAST of HG10006951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DEY1	3.0e-16	30.64	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
O75940	9.8e-15	29.73	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
Q5R591	1.3e-14	29.39	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
Q3T045	3.7e-14	30.07	Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMN...	[more]
Q8BGT7	1.1e-13	29.39	Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of HG10006951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	1.2e-151	91.64	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	1.2e-151	91.64	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	7.0e-149	90.68	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CD96	2.0e-140	97.72	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]
A0A1S3CE07	1.6e-132	95.72	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]

BLAST of HG10006951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	6.4e-102	63.87	nucleic acid binding;RNA binding	[more]
AT2G02570.2	6.4e-102	63.87	nucleic acid binding;RNA binding	[more]
AT2G02570.4	6.4e-102	63.87	nucleic acid binding;RNA binding	[more]
AT2G02570.3	2.9e-94	60.65	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	GENE3D	2.30.30.140		coord: 108..164 e-value: 8.1E-11 score: 43.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..288
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..304
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..304
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 112..163
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 111..168 e-value: 2.6E-11 score: 53.6
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 112..170 score: 13.403981
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 116..161 e-value: 6.22883E-11 score: 54.9115
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 73..169 e-value: 2.1E-6 score: 27.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006951.1	HG10006951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding