HG10006940 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGGCAAGGTGTTACACTAATGTGTTACTGGAATGGGACAACGACGAGTGGACCACATGGCATTTCCTACGAAGGTGCTGCACCAAAGCCCATCCGAGTTGGCTATGGGATAACGCATAACGAGTTGGTTGATAGGATATATGGAGTTACTGGATTCGACAAGCAATCCTTTAAACTAAAGATCATATGTAGGTATCCAGCATGTAGAGAATACATACCTGTGCCAATTGACGATGATGAGTCTATAGATATCATGTTTGACGTGGCACGACAACCGGGAACTAATTGTCTAGAACTATATGTTGAAAGAGAACCAGTCTGCAACCATAACCCAATAAATGTTCCAGAACCAACCATTGTTGATAACCAGGTATATTCCTAATTGTTTGTGTTGTATAAAATTGTTTCTCATTCTTATTAACATGCTGGCTAACCAGATTTCCATATTTTCTTTCTAGTTATTTTATTGTTATTGTTCATTGAGTTTTGCACTATGTTTTACAGACGACAGATGAGATAGCCACAGATGATGCCCCAGTTGATAGCTTTCTAGATCCGGGACCAGTAGACAATTCGATTCTTGTTCTACAAAATCAGCATAGGTCTGAAGCCATATGGATGGGGGAGGTTCGATCTACTTCTGTAGTTTATTGTAAATTGCATTTATCAAGTAGAATTTTTCATATATGTAAATAGGCAAATTGACAATCTTCCTAACTTGTAGGATCCTAGTGTGTTAACTTGTAGACAACGGCTGGCAGCAATGATGAAAGATTGGCAATTAGATCCCCGTGTCCGTCAACTTATCATCAAGGCTGGATTTTATGGGGTATATAGGGTTGGAATCTTACAAATTGATTGGCCCTTGATTACAGCATTGGTCGAGCGGTGGCGGCAAGAAACCCACACTTTTCATTTTACTGTTGGTGAGAGTACTGTCACACTACAAGATGTAGCGTTGTTGTTAGGTCTACAAGTAAATGGCTGGGTAGTAACTGGAAATACTGATCTCCAATGGGAAGATTTGTGTGAGGAGCTATTAGGAATCAGGCCTGACTCGAGTGTGCTCCATGGTTCAGCCCTTAAGGTTAGTTGGTTGCGAACTCATTTTCAAGAACCTCCATCAGATGCAAATGATGTTACATTACGACGCTATGCTAGAGCATATATTTTAAGTTTGATGGGTAGCGTTCTCTTTGCGGATAAGTCTGGAGCCGATGTCCAGCTCATGTTCCTACCTTTTTTAAGAGATTTGGCAAGTGTCGAGCAATTTAGTTGGGGAAGTGCAGTGCTTGCACATTTATATAGAGAGCTTTGCCGAGCCAGCAAGAAAGGGGCCAATGAGATTTCTGGCCCTCTTGTTCTGTTGCAGGTGTGAGTATGCAATGCATATTCAGTTTTTTCTTGAATCAAAACACATATAATATCCTATAAATTGAACAAATATCTCTATTATAATCTGTAATTATGTATGCATGTGTAGTAGCGAAGCTAGAATTTTTCATAGGAAAGGACAAAATGCTACATTTTAATTTATGAGGGGAAATTAAAATCTTTAACTTCTTTATATAATCTTCTTAAACAAAGACGAACTATGGAATAAATTGTTCCTCCATCCCATGCTAACTTTATTTATTTATTAATTTTTAAATTTTTTATTTCTATAGATATGGGCATGGGAACGCCTAGATATTAGCCGGCCAGAGAGGTTGCCTTATAAAGGTCGAAAATCAATTATACCAGATACAAAGGCTGAGGAGGAGAGAAGTTCCATTGTAGGGGATGCTATTGTAGATGACGAACAATTACCAGCAGATCCATTAGGATGCAGGTATGTGATAGCATCCCCATTACTAGAAGAATAAAAGTTGAAACTATATTGTAATATTAATGAAAACTTGCAATGCTAATAGCCTTTTGAAAAAGCTCACAAAACAACTAATCTTCAATTTATTTTTTAAACTTCATAACTCCTTATTCTGCACCATTCCACTTCTTACTCCAATCACCCCCTAATAGTCTTTCCACTATTATTTTACTAATACTCTAGTGATATGTCTCTTTATTCATTCTACTGAAATTTATTTCCTATTATATTAGATGGAAGGCCGCTGTGATTCGTAGAGATAATCCCCACAGAGCATTAATATTTTACAGGGACTTGCTTGATCAGCAAACGGAGAACCAGGTTCCTTATTTTACCTGTTCTCATTTTCTTTTCCATAATTATGATGATTAAATTTACATTATATTAAGGTTTCATACTTTTGTTTGAATAGATAAATGGGGTTAAATTATAATTTTGGTGTTAAAACTTGAAGATTTGTGCCTAATGAATTTCTGTTTTTTTTTTTTTTTTTGGGGGGGGGGGGTGTAAAAAAATAGTTTTATTGATGTATGAAATTACAAAAGAGGTGAAAAAGATCCCAAACCAAAGGAGTTACAAAAGACTTCTCCAACTATTCAAAAGTAAAATATTTAAAAAGAGGTCACAATTTACACCAAGATATAGTTAAGTAGGTGATGCTATCCATAAGATGTTCAAAAGGCCTCTCCTTGCTTCCAAAAGTTCTCTTGTTCGGTCCAACTGACCCAAAATAATGCTTTGATGATGTTGACCCAACTATGCTTCTTCGCGTTTTTAATGGATGCCCTGGTAAAGTTGAAGCGAGGAGAAGATGAACATGTTAGGGTAGGGAAGTCAACCATCTGAAGTTGTTCACGAGGTTTGTCCAAAAAGAGGAGACAGAAAGGCAAAAAGAGGAAGAGGTGGTCTTGTGACAATGCTGCATTCTACACAAAGTGCACGAATGTGGTGAACTAGCCATGTACGACATGTGGCACTGAAGTTTCTCTTGAGCATGGTGAGCAATCTCCAAAAAGGAAGAATTTGATTTTTTTGGGACCCAAGATAAAATTTGACATTGGAGGATGGCCATTGGCCTTCCAGTGCCCATGTGAGGATTGTATATTGATGGATCCCAGTGTGATGCCATGATGAGTAGACTCAAACATTTCCTTCAATCAACCTTCTCCGAAGGACTTTTTACTCAAGTCGGAACCTCCAAACTCATTTAGCAAGGAGAGCACGATTTTTTTCATGAATATTTTGGATAGCAAGGCCACCTAATGTCACGGGGAGAATAACTCTTCACAAATAACGAGGTTTTGGTACTGCCTTTTCACAAAATTTTTCTATTGAACCTTTCTGTGGAGGCGGCCACCTTATTAAGTATTTAGAACAATTAGGTGGGGTGGTTTGTTAGGACACTTTGGATAAGAGTAAGGCAAGATTGCAGTCTCCTCATAGAAATTATCCAATGATCCTTTCTATTGCTAAGGCTTTCCTTTTTTTCCCAGTTCATTTTGTCTTCTCTGAGTCGTCTTAACTTTTTGTGGGTCTTAGTTGTCCTCTCACTCATCACGAGTCTTTGGAGGTGGTAGACCTTTTTTCTACTAATAAGTGCTTGTTTTCTTATCTATTGTAGGTATTCTCTTGAGGAATTCATATATTTTTGTTCTCATTGTTTGATTTCTAGATAATAAATACAGTTGAAGTGGAATGTTATAAGAATTGGTCCATAAAAGATATATGTTTCACAAGAAATTGCCTAATTATCATTTATCAATAGGTTTTTACTCTGGTGTTTTTACCGAGTGCAGATGGTTTGGCAACCTTATACTTCTGAACGTCTTGCAACGTTACCAGATTCCTTGCTCAGAGACCCACATGTGTGGCGGACGATTGCTCCGCTTATTTGTTTTGATATTGTTGAATGGCATCATCCAGAACGAGTTCTCCGCCAATTTGGTCTTCGCCAAGAAATCCCAGTGCCTTGTGATACAGAAACAAAGTTGCATACAATTGACAGGCGAGGAAAACATCATTATGATTGGAAGGCCTATCACGGACAGTATATTAAATTATGGGAGGCTCGAGAGAAGAGCATTGCAATGGGCAAGATAGAAGAACAACCAATGCACTACCATGATCCTTACATGGTGTGGTATAGAAATGTTACTCGACGTTTGATCACCCCTCTCACCCAAAGGTCACATATGCGGTTTCAGCCTTCGAGTGGAACGTCACATTTACTTGTATGAATCATTTAGAATCTATTGATGTTATAAATTGAAATCTATCACTTTTGAAAGCCAACTTGATTCGAAATCTATAATTTTCTTTGCAGGTACAAAGTTTGACAACTATTCATAATCAGTGTGCATGTGCACTTGATTCTTTTACTAGTGATGGAGCAATGAAATCGTTGGAGTGCATTCAAACAACCTGCGTTCGAGTTTTGCAGATGATTGGAGAAACTCGACACCTCAAAGGAAAACAATCAGTCATTTCAACTAAACCAATCACAATTGTTCCAATTTCTTCTAATGATGCTAACAATACAGAAAACCACCAACACGACGAGTGTGCTTCTCCATCTGTAAATACGGTGACAGTTCTAACTAAAGCTCCATTGGTCAGGGGACAAGGAAGAGGTAGAGGTAGAGGTCTTGCCAGAGGCAGCATCAAGGGTCAAGGTGGAAGTTATTGCAAGGTTCAAAGTGTTGTGGTAGAGACATCTCCGCAGTCATCACTATCAACACATTCAATTCCAAAAGTCCTGCAGCCCGATAACAGTTCAGATAGACAGTTGCATATGAAAGATGTTGAGGTTGGCACAATGATTGAACCAGTGGACATGGTTTCTGCTGAAACTTCACCAGAGAATGAGAAAGAAACACGTGTGAGAGAAAAATCACCGACACAATCATTCCTAATGTATAAGAAAAGTAAAAGAGACGCAGTTGTATTGCCATCAACTAGACCGATGCATCTGTCGAAGGGGGATAAAATGGCACAGTCGATACCTCTACTAGAACCAGAAGAGGAGTCAATGCACCTTTCGGGGAAGGAAGATCTTGAGAGAACAATTGCTTTACCTAAGGTTGGATTGAAATCTGGCTCTTGTAATCTTAGTCATGAGCAGTCTGACCATCTTAATTTTCCTAAAAAGAAACGGAAGCACATTTAA ATGAGTAGGCAAGGTGTTACACTAATGTGTTACTGGAATGGGACAACGACGAGTGGACCACATGGCATTTCCTACGAAGGTGCTGCACCAAAGCCCATCCGAGTTGGCTATGGGATAACGCATAACGAGTTGGTTGATAGGATATATGGAGTTACTGGATTCGACAAGCAATCCTTTAAACTAAAGATCATATGTAGGTATCCAGCATGTAGAGAATACATACCTGTGCCAATTGACGATGATGAGTCTATAGATATCATGTTTGACGTGGCACGACAACCGGGAACTAATTGTCTAGAACTATATGTTGAAAGAGAACCAGTCTGCAACCATAACCCAATAAATGTTCCAGAACCAACCATTGTTGATAACCAGACGACAGATGAGATAGCCACAGATGATGCCCCAGTTGATAGCTTTCTAGATCCGGGACCAGTAGACAATTCGATTCTTGTTCTACAAAATCAGCATAGGTCTGAAGCCATATGGATGGGGGAGATATGGGCATGGGAACGCCTAGATATTAGCCGGCCAGAGAGGTTGCCTTATAAAGGTCGAAAATCAATTATACCAGATACAAAGGCTGAGGAGGAGAGAAGTTCCATTGTAGGGGATGCTATTGTAGATGACGAACAATTACCAGCAGATCCATTAGGATGCAGATGGAAGGCCGCTGTGATTCGTAGAGATAATCCCCACAGAGCATTAATATTTTACAGGGACTTGCTTGATCAGCAAACGGAGAACCAGGTACAAAGTTTGACAACTATTCATAATCAGTGTGCATGTGCACTTGATTCTTTTACTAGTGATGGAGCAATGAAATCGTTGGAGTGCATTCAAACAACCTGCGTTCGAGTTTTGCAGATGATTGGAGAAACTCGACACCTCAAAGGAAAACAATCAGTCATTTCAACTAAACCAATCACAATTGTTCCAATTTCTTCTAATGATGCTAACAATACAGAAAACCACCAACACGACGAGTGTGCTTCTCCATCTGTAAATACGGTGACAGTTCTAACTAAAGCTCCATTGGTCAGGGGACAAGGAAGAGGTAGAGGTAGAGGTCTTGCCAGAGGCAGCATCAAGGGTCAAGGTGGAAGTTATTGCAAGGTTCAAAGTGTTGTGGTAGAGACATCTCCGCAGTCATCACTATCAACACATTCAATTCCAAAAGTCCTGCAGCCCGATAACAGTTCAGATAGACAGTTGCATATGAAAGATGTTGAGGTTGGCACAATGATTGAACCAGTGGACATGGTTTCTGCTGAAACTTCACCAGAGAATGAGAAAGAAACACGTGTGAGAGAAAAATCACCGACACAATCATTCCTAATGTATAAGAAAAGTAAAAGAGACGCAGTTGTATTGCCATCAACTAGACCGATGCATCTGTCGAAGGGGGATAAAATGGCACAGTCGATACCTCTACTAGAACCAGAAGAGGAGTCAATGCACCTTTCGGGGAAGGAAGATCTTGAGAGAACAATTGCTTTACCTAAGGTTGGATTGAAATCTGGCTCTTGTAATCTTAGTCATGAGCAGTCTGACCATCTTAATTTTCCTAAAAAGAAACGGAAGCACATTTAA ATGAGTAGGCAAGGTGTTACACTAATGTGTTACTGGAATGGGACAACGACGAGTGGACCACATGGCATTTCCTACGAAGGTGCTGCACCAAAGCCCATCCGAGTTGGCTATGGGATAACGCATAACGAGTTGGTTGATAGGATATATGGAGTTACTGGATTCGACAAGCAATCCTTTAAACTAAAGATCATATGTAGGTATCCAGCATGTAGAGAATACATACCTGTGCCAATTGACGATGATGAGTCTATAGATATCATGTTTGACGTGGCACGACAACCGGGAACTAATTGTCTAGAACTATATGTTGAAAGAGAACCAGTCTGCAACCATAACCCAATAAATGTTCCAGAACCAACCATTGTTGATAACCAGACGACAGATGAGATAGCCACAGATGATGCCCCAGTTGATAGCTTTCTAGATCCGGGACCAGTAGACAATTCGATTCTTGTTCTACAAAATCAGCATAGGTCTGAAGCCATATGGATGGGGGAGATATGGGCATGGGAACGCCTAGATATTAGCCGGCCAGAGAGGTTGCCTTATAAAGGTCGAAAATCAATTATACCAGATACAAAGGCTGAGGAGGAGAGAAGTTCCATTGTAGGGGATGCTATTGTAGATGACGAACAATTACCAGCAGATCCATTAGGATGCAGATGGAAGGCCGCTGTGATTCGTAGAGATAATCCCCACAGAGCATTAATATTTTACAGGGACTTGCTTGATCAGCAAACGGAGAACCAGGTACAAAGTTTGACAACTATTCATAATCAGTGTGCATGTGCACTTGATTCTTTTACTAGTGATGGAGCAATGAAATCGTTGGAGTGCATTCAAACAACCTGCGTTCGAGTTTTGCAGATGATTGGAGAAACTCGACACCTCAAAGGAAAACAATCAGTCATTTCAACTAAACCAATCACAATTGTTCCAATTTCTTCTAATGATGCTAACAATACAGAAAACCACCAACACGACGAGTGTGCTTCTCCATCTGTAAATACGGTGACAGTTCTAACTAAAGCTCCATTGGTCAGGGGACAAGGAAGAGGTAGAGGTAGAGGTCTTGCCAGAGGCAGCATCAAGGGTCAAGGTGGAAGTTATTGCAAGGTTCAAAGTGTTGTGGTAGAGACATCTCCGCAGTCATCACTATCAACACATTCAATTCCAAAAGTCCTGCAGCCCGATAACAGTTCAGATAGACAGTTGCATATGAAAGATGTTGAGGTTGGCACAATGATTGAACCAGTGGACATGGTTTCTGCTGAAACTTCACCAGAGAATGAGAAAGAAACACGTGTGAGAGAAAAATCACCGACACAATCATTCCTAATGTATAAGAAAAGTAAAAGAGACGCAGTTGTATTGCCATCAACTAGACCGATGCATCTGTCGAAGGGGGATAAAATGGCACAGTCGATACCTCTACTAGAACCAGAAGAGGAGTCAATGCACCTTTCGGGGAAGGAAGATCTTGAGAGAACAATTGCTTTACCTAAGGTTGGATTGAAATCTGGCTCTTGTAATCTTAGTCATGAGCAGTCTGACCATCTTAATTTTCCTAAAAAGAAACGGAAGCACATTTAA MSRQGVTLMCYWNGTTTSGPHGISYEGAAPKPIRVGYGITHNELVDRIYGVTGFDKQSFKLKIICRYPACREYIPVPIDDDESIDIMFDVARQPGTNCLELYVEREPVCNHNPINVPEPTIVDNQTTDEIATDDAPVDSFLDPGPVDNSILVLQNQHRSEAIWMGEIWAWERLDISRPERLPYKGRKSIIPDTKAEEERSSIVGDAIVDDEQLPADPLGCRWKAAVIRRDNPHRALIFYRDLLDQQTENQVQSLTTIHNQCACALDSFTSDGAMKSLECIQTTCVRVLQMIGETRHLKGKQSVISTKPITIVPISSNDANNTENHQHDECASPSVNTVTVLTKAPLVRGQGRGRGRGLARGSIKGQGGSYCKVQSVVVETSPQSSLSTHSIPKVLQPDNSSDRQLHMKDVEVGTMIEPVDMVSAETSPENEKETRVREKSPTQSFLMYKKSKRDAVVLPSTRPMHLSKGDKMAQSIPLLEPEEESMHLSGKEDLERTIALPKVGLKSGSCNLSHEQSDHLNFPKKKRKHI Homology
BLAST of HG10006940 vs. NCBI nr
Match: XP_038876552.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X3 [Benincasa hispida] >XP_038876553.1 serine/threonine-protein phosphatase 7 long form homolog isoform X3 [Benincasa hispida] >XP_038876554.1 serine/threonine-protein phosphatase 7 long form homolog isoform X3 [Benincasa hispida]) HSP 1 Score: 786.2 bits (2029), Expect = 1.8e-223 Identity = 464/890 (52.13%), Postives = 483/890 (54.27%), Query Frame = 0
BLAST of HG10006940 vs. NCBI nr
Match: XP_038876549.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Benincasa hispida] >XP_038876550.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 786.2 bits (2029), Expect = 1.8e-223 Identity = 464/890 (52.13%), Postives = 483/890 (54.27%), Query Frame = 0
BLAST of HG10006940 vs. NCBI nr
Match: XP_038876551.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 782.7 bits (2020), Expect = 2.0e-222 Identity = 462/888 (52.03%), Postives = 481/888 (54.17%), Query Frame = 0
BLAST of HG10006940 vs. NCBI nr
Match: XP_038876555.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X4 [Benincasa hispida]) HSP 1 Score: 770.8 bits (1989), Expect = 7.8e-219 Identity = 456/882 (51.70%), Postives = 475/882 (53.85%), Query Frame = 0
BLAST of HG10006940 vs. NCBI nr
Match: XP_011654504.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus] >XP_031741300.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus] >KAE8648238.1 hypothetical protein Csa_018425 [Cucumis sativus]) HSP 1 Score: 751.9 bits (1940), Expect = 3.7e-213 Identity = 453/892 (50.78%), Postives = 480/892 (53.81%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.6e-09 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy TrEMBL
Match: A0A0A0KPN9 (PMD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G074680 PE=4 SV=1) HSP 1 Score: 833.6 bits (2152), Expect = 4.7e-238 Identity = 453/680 (66.62%), Postives = 480/680 (70.59%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy TrEMBL
Match: A0A1S3CE15 (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC103499383 PE=4 SV=1) HSP 1 Score: 731.5 bits (1887), Expect = 2.5e-207 Identity = 439/868 (50.58%), Postives = 465/868 (53.57%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy TrEMBL
Match: A0A5A7UKT4 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00310 PE=4 SV=1) HSP 1 Score: 731.5 bits (1887), Expect = 2.5e-207 Identity = 439/868 (50.58%), Postives = 465/868 (53.57%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy TrEMBL
Match: A0A7N2L2C0 (PMD domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 6.9e-88 Identity = 271/899 (30.14%), Postives = 338/899 (37.60%), Query Frame = 0
BLAST of HG10006940 vs. ExPASy TrEMBL
Match: A0A2N9HQF2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42110 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.2e-78 Identity = 259/892 (29.04%), Postives = 324/892 (36.32%), Query Frame = 0
BLAST of HG10006940 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase ) HSP 1 Score: 86.7 bits (213), Expect = 6.3e-17 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of HG10006940 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase ) HSP 1 Score: 77.4 bits (189), Expect = 3.8e-14 Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of HG10006940 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase ) HSP 1 Score: 71.6 bits (174), Expect = 2.1e-12 Identity = 43/146 (29.45%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of HG10006940 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases ) HSP 1 Score: 64.7 bits (156), Expect = 2.6e-10 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = 0
HSP 2 Score: 45.1 bits (105), Expect = 2.1e-04 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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