HG10006853 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006853
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S5-like
Location	Chr07: 22598978 .. 22599601 (+)
RNA-Seq Expression	HG10006853
Synteny	HG10006853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTGAAGTTGATGTGGTAAACCCGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATCGGTGGACCTTTGATGATGTCCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCTGGGAGGTACTCGGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATAATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTAATTGTTGACGCCGTGGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCTGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTACGCAATCAAGAAAAAGGACGAGATTGAGAGAGTTGCAAAGGCCAATCGTTGA

mRNA sequence

ATGGCTGTTGAAGTTGATGTGGTAAACCCGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATCGGTGGACCTTTGATGATGTCCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCTGGGAGGTACTCGGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATAATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTAATTGTTGACGCCGTGGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCTGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTACGCAATCAAGAAAAAGGACGAGATTGAGAGAGTTGCAAAGGCCAATCGTTGA

Coding sequence (CDS)

ATGGCTGTTGAAGTTGATGTGGTAAACCCGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATCGGTGGACCTTTGATGATGTCCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCTGGGAGGTACTCGGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACAAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATAATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTAATTGTTGACGCCGTGGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCTGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTACGCAATCAAGAAAAAGGACGAGATTGAGAGAGTTGCAAAGGCCAATCGTTGA

Protein sequence

MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR

Homology

[Close]

BLAST of HG10006853 vs. NCBI nr
Match: XP_038888891.1 (40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888893.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038893011.1 40S ribosomal protein S5-like [Benincasa hispida] >XP_038893013.1 40S ribosomal protein S5-like [Benincasa hispida] >KAA0032160.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa] >TYK14405.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVEVDVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. NCBI nr
Match: XP_008456864.1 (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVEVDVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 47  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 106

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 107 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 166

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 167 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 226

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 227 INAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]

BLAST of HG10006853 vs. NCBI nr
Match: XP_038888890.1 (40S ribosomal protein S5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVEVDVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 15  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 74

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 75  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 134

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 135 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 194

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 195 INAAKGSSNSYAIKKKDEIERVAKANR 221

[Close]

BLAST of HG10006853 vs. NCBI nr
Match: XP_008447165.1 (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo] >KAA0040833.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa] >TYK17809.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 3.7e-108
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVE+DVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. NCBI nr
Match: XP_008447164.1 (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 3.7e-108
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVE+DVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 14  MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 73

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 74  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 133

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 134 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 193

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 194 INAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]

BLAST of HG10006853 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.3e-97
Identity = 180/190 (94.74%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 18  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
           +VKLFNRW+FDDVQ++D+SL+DYIGV P+KHATYVPHTAGRYSVKRFRKAQCPIVERLTN
Sbjct: 8   EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67

Query: 78  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 137
           SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVV
Sbjct: 68  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127

Query: 138 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
           RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187

Query: 198 EIERVAKANR 208
           EIERVAKANR
Sbjct: 188 EIERVAKANR 197

[Close]

BLAST of HG10006853 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.2e-97
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MA   ++      Q  ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-96
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQP-HHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRY 60
           MA   D V+ E+ Q   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRY
Sbjct: 1   MATAAD-VDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRY 60

Query: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAV 120
           SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+
Sbjct: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 120

Query: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADE 180
           VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADE
Sbjct: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADE 180

Query: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 208
           LINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 309.7 bits (792), Expect = 2.5e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 18  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 78  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 137
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 138 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 198 EIERVAKANR 208
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of HG10006853 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 309.7 bits (792), Expect = 2.5e-83
Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 18  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 77
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 78  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 137
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 138 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 198 EIERVAKANR 208
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of HG10006853 vs. ExPASy TrEMBL
Match: A0A5A7SN17 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00550 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVEVDVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. ExPASy TrEMBL
Match: A0A1S3C3S7 (40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVEVDVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 47  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 106

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 107 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 166

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 167 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 226

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 227 INAAKGSSNSYAIKKKDEIERVAKANR 253

[Close]

BLAST of HG10006853 vs. ExPASy TrEMBL
Match: A0A5D3D3Q1 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00570 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVE+DVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. ExPASy TrEMBL
Match: A0A1S3BGS8 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVE+DVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. ExPASy TrEMBL
Match: A0A1S3BGS9 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MAVE+DVVN ELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 14  MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 73

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 74  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 133

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 134 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 193

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 194 INAAKGSSNSYAIKKKDEIERVAKANR 220

[Close]

BLAST of HG10006853 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 355.1 bits (910), Expect = 3.7e-98
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MA   ++      Q  ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 355.1 bits (910), Expect = 3.7e-98
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60
           MA   ++      Q  ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 208
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-97
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQP-HHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRY 60
           MA   D V+ E+ Q   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRY
Sbjct: 1   MATAAD-VDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRY 60

Query: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAV 120
           SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+
Sbjct: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 120

Query: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADE 180
           VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADE
Sbjct: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADE 180

Query: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 208
           LINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-97
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAVEVDVVNPELTQP-HHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRY 60
           MA   D V+ E+ Q   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRY
Sbjct: 1   MATAAD-VDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRY 60

Query: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAV 120
           SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+
Sbjct: 61  SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 120

Query: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADE 180
           VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADE
Sbjct: 121 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADE 180

Query: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 208
           LINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 LINAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of HG10006853 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 74  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 133
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 134 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 193
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 194 AIKKKDEIERVAKANR 208
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:

BLAST of HG10006853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888891.1	2.8e-108	99.52	40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S...	[more]
XP_008456864.1	2.8e-108	99.52	PREDICTED: 40S ribosomal protein S5-like [Cucumis melo]	[more]
XP_038888890.1	2.8e-108	99.52	40S ribosomal protein S5-like isoform X1 [Benincasa hispida]	[more]
XP_008447165.1	3.7e-108	99.03	PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo] >KAA0040833.1...	[more]
XP_008447164.1	3.7e-108	99.03	PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo]	[more]

BLAST of HG10006853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65731	2.3e-97	94.74	40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1	[more]
Q9ZUT9	5.2e-97	87.44	40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1	[more]
P51427	3.4e-96	87.98	40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2	[more]
Q5E988	2.5e-83	81.05	40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3	[more]
P46782	2.5e-83	81.05	40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4	[more]

BLAST of HG10006853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SN17	1.4e-108	99.52	40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C3S7	1.4e-108	99.52	40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1	[more]
A0A5D3D3Q1	1.8e-108	99.03	40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BGS8	1.8e-108	99.03	40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682...	[more]
A0A1S3BGS9	1.8e-108	99.03	40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682...	[more]

BLAST of HG10006853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37270.1	3.7e-98	87.44	ribosomal protein 5B	[more]
AT2G37270.2	3.7e-98	87.44	ribosomal protein 5B	[more]
AT3G11940.1	2.4e-97	87.98	ribosomal protein 5A	[more]
AT3G11940.2	2.4e-97	87.98	ribosomal protein 5A	[more]
ATCG01240.1	4.6e-08	35.29	ribosomal protein S7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	TIGRFAM	TIGR01028	TIGR01028	coord: 19..207 e-value: 4.1E-90 score: 298.4
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	CDD	cd14867	uS7_Eukaryote	coord: 20..207 e-value: 4.19613E-137 score: 379.205
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 61..207 e-value: 5.8E-37 score: 126.6
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 2..207 e-value: 8.0E-40 score: 134.8
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 3..207
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 2..207 e-value: 2.2E-96 score: 323.2
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 20..207
None	No IPR available	PANTHER	PTHR11205:SF36	40S RIBOSOMAL PROTEIN S5	coord: 3..207
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 73..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006853.1	HG10006853.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding