HG10006849 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006849
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Casparian strip membrane protein 1
Location	Chr07: 22569660 .. 22569872 (+)
RNA-Seq Expression	HG10006849
Synteny	HG10006849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTGGCTCTGACTGTGAACACAGCAGCAGCAGCGGTGGTATCTCTAGCACACAGTGGGAACTCAAGCACAAACTGGTTGTCAAGATGCAACCAATTTGGTGACTTTTTCCAACAAGCCAGTGGGGCTGTCATTGGCTCTTTTGCTGCTGTCTTGTTCTTCCTTTTACTCATCTTGTTCTCTGCTTTTTCTCTCAAAAATACCCATTGA

mRNA sequence

ATGCAGGTGGCTCTGACTGTGAACACAGCAGCAGCAGCGGTGGTATCTCTAGCACACAGTGGGAACTCAAGCACAAACTGGTTGTCAAGATGCAACCAATTTGGTGACTTTTTCCAACAAGCCAGTGGGGCTGTCATTGGCTCTTTTGCTGCTGTCTTGTTCTTCCTTTTACTCATCTTGTTCTCTGCTTTTTCTCTCAAAAATACCCATTGA

Coding sequence (CDS)

ATGCAGGTGGCTCTGACTGTGAACACAGCAGCAGCAGCGGTGGTATCTCTAGCACACAGTGGGAACTCAAGCACAAACTGGTTGTCAAGATGCAACCAATTTGGTGACTTTTTCCAACAAGCCAGTGGGGCTGTCATTGGCTCTTTTGCTGCTGTCTTGTTCTTCCTTTTACTCATCTTGTTCTCTGCTTTTTCTCTCAAAAATACCCATTGA

Protein sequence

MQVALTVNTAAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLILFSAFSLKNTH

Homology

[Close]

BLAST of HG10006849 vs. NCBI nr
Match: XP_004143331.1 (casparian strip membrane protein 1 [Cucumis sativus] >KGN48281.1 hypothetical protein Csa_003708 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 6.4e-20
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 140 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 199

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 200 ILFSALSLKNSH 211

[Close]

BLAST of HG10006849 vs. NCBI nr
Match: XP_008462597.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: Full=Casparian strip membrane protein 1; Short=CmCASP1 [Cucumis melo] >KAA0025237.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 6.4e-20
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 138 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLL 197

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 198 ILFSALSLKNSH 209

[Close]

BLAST of HG10006849 vs. NCBI nr
Match: XP_038883194.1 (casparian strip membrane protein 1 [Benincasa hispida])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWLS CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 140 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLSICNQFGDFCQQASGAVVGSFAAVLLFLLL 199

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLK++H
Sbjct: 200 ILFSALSLKSSH 211

[Close]

BLAST of HG10006849 vs. NCBI nr
Match: XP_023544952.1 (casparian strip membrane protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VAL ++T    AAAAVV+LAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 141 VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 200

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN H
Sbjct: 201 ILFSALSLKNAH 212

[Close]

BLAST of HG10006849 vs. NCBI nr
Match: XP_022977901.1 (casparian strip membrane protein 1 [Cucurbita maxima])

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VAL ++T    AAAAVV+LAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 141 VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 200

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN H
Sbjct: 201 ILFSALSLKNAH 212

[Close]

BLAST of HG10006849 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.4e-23
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 138 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLL 197

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 198 ILFSALSLKNSH 209

[Close]

BLAST of HG10006849 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-13
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAA+V LAH+GNSSTNWL+ C QFGDF Q+ SGAV+ SF  V+ F+ L
Sbjct: 129 VALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVIFVFL 188

Query: 63  ILFSAFSLK 68
           ++ SAF+L+
Sbjct: 189 LVLSAFALR 197

[Close]

BLAST of HG10006849 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAA+V LAH+GNS+TNWL+ C Q+GDF Q+ SGAV+ SF  V+ F+ L
Sbjct: 129 VALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAVVASFITVVIFVFL 188

Query: 63  ILFSAFSLK 68
           I+ SAF+L+
Sbjct: 189 IVLSAFALR 197

[Close]

BLAST of HG10006849 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.0e-13
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAA+V LAH+GN S NWL+ C QFGDF Q+ SG V+ SF +VL FLLL
Sbjct: 130 VALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGVVASFVSVLVFLLL 189

Query: 63  ILFSAFSLK 68
           ++ SA +L+
Sbjct: 190 VVMSAVALR 198

[Close]

BLAST of HG10006849 vs. ExPASy Swiss-Prot
Match: Q9ZQI2 (Casparian strip membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=CASP3 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.1e-12
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 1   MQVALTVNTAAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLIL 60
           M + L   +A+AA+V LAH+GNSS+NWL  C QFGDF Q  SGAV+ SF A    + L++
Sbjct: 152 MGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVI 211

Query: 61  FSAFSLKNT 70
            SAF+LK T
Sbjct: 212 LSAFALKRT 220

[Close]

BLAST of HG10006849 vs. ExPASy TrEMBL
Match: A0A5A7SKE2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00860 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-20
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 138 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLL 197

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 198 ILFSALSLKNSH 209

[Close]

BLAST of HG10006849 vs. ExPASy TrEMBL
Match: A0A0A0KKJ8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-20
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 140 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 199

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 200 ILFSALSLKNSH 211

[Close]

BLAST of HG10006849 vs. ExPASy TrEMBL
Match: A0A1S3CHB9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-20
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VALT+NT    AAAAVVSLAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 138 VALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLL 197

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN+H
Sbjct: 198 ILFSALSLKNSH 209

[Close]

BLAST of HG10006849 vs. ExPASy TrEMBL
Match: A0A6J1IL91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VAL ++T    AAAAVV+LAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 141 VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 200

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN H
Sbjct: 201 ILFSALSLKNAH 212

[Close]

BLAST of HG10006849 vs. ExPASy TrEMBL
Match: A0A6J1EEC6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433348 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           VAL ++T    AAAAVV+LAHSGNSSTNWL+ CNQFGDF QQASGAV+GSFAAVL FLLL
Sbjct: 141 VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 200

Query: 63  ILFSAFSLKNTH 71
           ILFSA SLKN H
Sbjct: 201 ILFSALSLKNAH 212

[Close]

BLAST of HG10006849 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-13
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 1   MQVALTVNTAAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLIL 60
           M + L   +A+AA+V LAH+GNSS+NWL  C QFGDF Q  SGAV+ SF A    + L++
Sbjct: 152 MGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVI 211

Query: 61  FSAFSLKNT 70
            SAF+LK T
Sbjct: 212 LSAFALKRT 220

[Close]

BLAST of HG10006849 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 9   TAAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLILFSAFSLK 68
           +AAAA+V LAH+GN++TNWL  C QFGDF Q+ SGAV+ +FA+V F  +L++ S  SLK
Sbjct: 142 SAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSLK 200

[Close]

BLAST of HG10006849 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 67.8 bits (164), Expect = 4.0e-12
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 5   LTVNTA----AAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLIL 64
           L +NTA    AAA+  LAHSGN +TNWL  C QFGDF Q++SGAV+ +F +V+FF +L++
Sbjct: 136 LALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVV 195

Query: 65  FSAFSLK 68
            S  +LK
Sbjct: 196 ISGVALK 202

[Close]

BLAST of HG10006849 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-11
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 3   VALTVNT----AAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLL 62
           + +T+NT    AAA++  LAH+GN STNWL  C QFGDF Q  S AV+    A+LFF++L
Sbjct: 136 LVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVL 195

Query: 63  ILFSAFSLK 68
           I+ SA +LK
Sbjct: 196 IIISAIALK 204

[Close]

BLAST of HG10006849 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 9   TAAAAVVSLAHSGNSSTNWLSRCNQFGDFFQQASGAVIGSFAAVLFFLLLILFSAFSLKN 68
           ++AAA+V LAH+GN+ TNW + C QF  F ++ SG++IGSF A++  +LLIL SA +L  
Sbjct: 126 SSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSR 185

Query: 69  TH 71
            H
Sbjct: 186 RH 187

The following BLAST results are available for this feature:

BLAST of HG10006849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143331.1	6.4e-20	83.33	casparian strip membrane protein 1 [Cucumis sativus] >KGN48281.1 hypothetical pr...	[more]
XP_008462597.1	6.4e-20	83.33	PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: ...	[more]
XP_038883194.1	1.1e-19	83.33	casparian strip membrane protein 1 [Benincasa hispida]	[more]
XP_023544952.1	2.7e-18	79.17	casparian strip membrane protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022977901.1	2.7e-18	79.17	casparian strip membrane protein 1 [Cucurbita maxima]	[more]

BLAST of HG10006849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI61	8.4e-23	83.33	Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
B9IIR5	1.2e-13	60.87	Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9HBX2	2.1e-13	59.42	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9SX12	6.0e-13	59.42	Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P...	[more]
Q9ZQI2	5.1e-12	53.62	Casparian strip membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=CASP3 PE=1...	[more]

BLAST of HG10006849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKE2	3.1e-20	83.33	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00...	[more]
A0A0A0KKJ8	3.1e-20	83.33	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1	[more]
A0A1S3CHB9	3.1e-20	83.33	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1	[more]
A0A6J1IL91	1.3e-18	79.17	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1	[more]
A0A6J1EEC6	1.3e-18	79.17	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433348 PE=3 SV=1	[more]

BLAST of HG10006849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27370.1	3.6e-13	53.62	Uncharacterised protein family (UPF0497)	[more]
AT5G06200.1	1.4e-12	57.63	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	4.0e-12	53.73	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	1.5e-11	52.17	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	2.0e-11	50.00	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..54 e-value: 1.7E-11 score: 44.2
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 8..65 e-value: 7.2E-14 score: 49.9
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 2..68
None	No IPR available	PANTHER	PTHR11615:SF281	CASPARIAN STRIP MEMBRANE PROTEIN 3	coord: 2..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006849.1	HG10006849.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding