HG10006821 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006821
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein trichome birefringence-like 16 isoform X1
Location	Chr07: 22271494 .. 22273134 (+)
RNA-Seq Expression	HG10006821
Synteny	HG10006821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGGGTTTTTATGGACTGAGGGGTAAAGAGTTATCTCTTATAACCATTGCCTTGATGTGCATGGTTATTATTATGTTGACATGGGAGAAAACTCCGCTTCTTAATACCTTTCCTCCACCTCAGACTCGGTTGCAGCTGTCTCCAGGTAATGGTTTGCTAATAGTTTCATTTCCATTAGACTTATTCGTGGTGCCAAAAAGTCAACGAGTCCTTTATGGAGCTGAAATTTCAGATAATTATACCACAGAAAATCCAGCCATTGTACAAAATTATATCTCCCAAGCAAGATGAATTCTTGCATGATTTATGAAAATTCTGAAGAATCGCTTTTTATCCAAGTGGACAAGGAATTATTCCGCATGTTTATTACGAGAAACATTGGCCATTTCTCTGTACCTGAAAATTCTTAGAAAACTAATCATGTTTTCGGCATATGAATTACGTTTAATAACCATGGGTGTTAGGTTATATATACACTCCTTTGTAGAATAACATGATCTGTACATGGAAGTTCATGGGATTTTTAATATCCTAAATGGCTGGCCATGGATTGAAGTTGAATCATGACGACCTTATTCACAATTAGCTCTTTTGAACTTTAGGTACATATTCATAACTGTGCTTCTGATTTTCTTTTGTAGCACAGACCGAGGTAGACTGGTTAGTATCTCTCCTTTGGAGCAACAAGGACATACTGGGGAATATGTTCCTGTTTTTGAAGATAAAAACATTGTAAATAATCAAGAAGCTCGTAGGTCGTTTTCTCATAGTTATTCAAATGAAGAGGACACAGTATCTTCTCAGAATAAAGGTATATATTTTTAACTCAACATTGCTAACATTTTTGTTTCCAGCGTATTCAGTTTATTATTAACTGTACCTAGGGGGAGGTCTTTCTAGATTAGTTGTGATTTTCCTTTTAGCTAATTTGGTAGTATAAATTTGTGGCATTTCTTAATTGTGGCAATAGTATGGTTGAATGATACTGATACAATCAGTACCTATAACTATAATTCTGGCTGAGCTTTTCAGGCAGAGAATTTTCTATTATGGTGTTGTCATTTCAAACTTGTTCTTTGAACTTGAAGCCTTGTTTTCTTTATCTATATTTGAGCTCTTGCTGCTATTAATAACATTCTTTATGTACTAGTTTGGATGTTGTAAATGCCATAGTAATTCTTCAATCAAGATCTCTGAATGTTAATTTTCCATCCAGGAAACCCTATAGGTTCCAGAGAAGCTACACACAAACAGATAGTGGAACTAAGAAATGATGGGAACTCAGGAAGTCCAAAAGAAATTATTGTAGATGAAACAATACATAACCAAATTGTGGTAGAAGGTAAAAAGGCTCCTATAAAGAAAGAGGATTTAAAACCAAAACCAGAAAAAGTTGATGAAAAGATAAAGCAGGTAGTAGAAGAAAATTATTCAATACAAGCAGAACAGAGTGCTGATTCAATGTTGCCGATTATCTACAACGTCAGCACGATAGATGATAAATTGAAAAGGAATCAAGGTGCGGAATATATTTCCTCTTTACTATTTGCCACTGCAAATTCTACTATGTTTCTTATATCCACATGGACACTTGGATCTGGAGAATTAGCACAGACCACGTTGAGTGTCATGTGA

mRNA sequence

ATGAAGAAGGGTTTTTATGGACTGAGGGGTAAAGAGTTATCTCTTATAACCATTGCCTTGATGTGCATGGTTATTATTATGTTGACATGGGAGAAAACTCCGCTTCTTAATACCTTTCCTCCACCTCAGACTCGGTTGCAGCTGTCTCCAGACCGAGGTAGACTGGTTAGTATCTCTCCTTTGGAGCAACAAGGACATACTGGGGAATATGTTCCTGTTTTTGAAGATAAAAACATTGTAAATAATCAAGAAGCTCGTAGGTCGTTTTCTCATAGTTATTCAAATGAAGAGGACACAGTATCTTCTCAGAATAAAGGAAACCCTATAGGTTCCAGAGAAGCTACACACAAACAGATAGTGGAACTAAGAAATGATGGGAACTCAGGAAGTCCAAAAGAAATTATTGTAGATGAAACAATACATAACCAAATTGTGGTAGAAGGTAAAAAGGCTCCTATAAAGAAAGAGGATTTAAAACCAAAACCAGAAAAAGTTGATGAAAAGATAAAGCAGGTAGTAGAAGAAAATTATTCAATACAAGCAGAACAGAGTGCTGATTCAATGTTGCCGATTATCTACAACGTCAGCACGATAGATGATAAATTGAAAAGGAATCAAGGTGCGGAATATATTTCCTCTTTACTATTTGCCACTGCAAATTCTACTATGTTTCTTATATCCACATGGACACTTGGATCTGGAGAATTAGCACAGACCACGTTGAGTGTCATGTGA

Coding sequence (CDS)

ATGAAGAAGGGTTTTTATGGACTGAGGGGTAAAGAGTTATCTCTTATAACCATTGCCTTGATGTGCATGGTTATTATTATGTTGACATGGGAGAAAACTCCGCTTCTTAATACCTTTCCTCCACCTCAGACTCGGTTGCAGCTGTCTCCAGACCGAGGTAGACTGGTTAGTATCTCTCCTTTGGAGCAACAAGGACATACTGGGGAATATGTTCCTGTTTTTGAAGATAAAAACATTGTAAATAATCAAGAAGCTCGTAGGTCGTTTTCTCATAGTTATTCAAATGAAGAGGACACAGTATCTTCTCAGAATAAAGGAAACCCTATAGGTTCCAGAGAAGCTACACACAAACAGATAGTGGAACTAAGAAATGATGGGAACTCAGGAAGTCCAAAAGAAATTATTGTAGATGAAACAATACATAACCAAATTGTGGTAGAAGGTAAAAAGGCTCCTATAAAGAAAGAGGATTTAAAACCAAAACCAGAAAAAGTTGATGAAAAGATAAAGCAGGTAGTAGAAGAAAATTATTCAATACAAGCAGAACAGAGTGCTGATTCAATGTTGCCGATTATCTACAACGTCAGCACGATAGATGATAAATTGAAAAGGAATCAAGGTGCGGAATATATTTCCTCTTTACTATTTGCCACTGCAAATTCTACTATGTTTCTTATATCCACATGGACACTTGGATCTGGAGAATTAGCACAGACCACGTTGAGTGTCATGTGA

Protein sequence

MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVSTIDDKLKRNQGAEYISSLLFATANSTMFLISTWTLGSGELAQTTLSVM

Homology

[Close]

BLAST of HG10006821 vs. NCBI nr
Match: XP_038890327.1 (protein trichome birefringence-like 14 isoform X1 [Benincasa hispida] >XP_038890328.1 protein trichome birefringence-like 14 isoform X1 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 3.6e-94
Identity = 184/210 (87.62%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQIV 120
           LEQQGHTGE+VPVFED+NIVNNQEAR  FSH YSNEEDTVSSQNKGNP+GSRE THKQIV
Sbjct: 61  LEQQGHTGEHVPVFEDRNIVNNQEARGPFSHGYSNEEDTVSSQNKGNPLGSRETTHKQIV 120

Query: 121 ELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQ 180
           ELRNDGNSGSP EII DETIHNQIVVEGKKAPIK+E  KPKPEKVD KIKQVVEENYS Q
Sbjct: 121 ELRNDGNSGSPGEIIEDETIHNQIVVEGKKAPIKQEVFKPKPEKVDGKIKQVVEENYSRQ 180

Query: 181 AEQSADSMLPIIYNVSTIDDKLKRNQGAEY 211
           AEQ+ DS+   IYN STIDDKLKR Q   Y
Sbjct: 181 AEQNVDSVSSNIYNGSTIDDKLKRTQACNY 210

[Close]

BLAST of HG10006821 vs. NCBI nr
Match: XP_004141075.1 (protein trichome birefringence-like 14 isoform X1 [Cucumis sativus] >KGN60499.1 hypothetical protein Csa_019518 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 3.3e-87
Identity = 175/222 (78.83%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMC VIIMLTWEKTPLLNT PPPQTRLQLS DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCTVIIMLTWEKTPLLNTIPPPQTRLQLSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQIV 120
             QQ HT EYVP+FEDKN V+NQEARR  SHSYSNEEDTVSSQNKGN IGSRE THKQIV
Sbjct: 61  SGQQEHTSEYVPIFEDKNTVSNQEARRPSSHSYSNEEDTVSSQNKGNHIGSREVTHKQIV 120

Query: 121 ELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQ 180
           ELRNDGNSGSPKEII DETIHNQIVV+GK APIKKE LKPKP+++DEKI++ VEENYS Q
Sbjct: 121 ELRNDGNSGSPKEIIEDETIHNQIVVKGKTAPIKKEVLKPKPKELDEKIEEAVEENYSSQ 180

Query: 181 AEQ------------SADSMLPIIYNVSTIDDKLKRNQGAEY 211
           AEQ            S DS+LPI+YN+STID+KLK+NQ   Y
Sbjct: 181 AEQSVEENYSRQAEESVDSVLPIVYNISTIDEKLKKNQACNY 222

[Close]

BLAST of HG10006821 vs. NCBI nr
Match: XP_008459933.1 (PREDICTED: protein trichome birefringence-like 14 isoform X1 [Cucumis melo] >XP_008459940.1 PREDICTED: protein trichome birefringence-like 14 isoform X1 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 2.2e-83
Identity = 170/223 (76.23%), Postives = 189/223 (84.75%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 61  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 120

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 121 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 180

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQGAEY 211
           QAEQ            S DS+ PI+YN+STID+KLK+NQ  +Y
Sbjct: 181 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQACDY 223

[Close]

BLAST of HG10006821 vs. NCBI nr
Match: XP_008459948.1 (PREDICTED: protein trichome birefringence-like 14 isoform X2 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-83
Identity = 170/220 (77.27%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 61  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 120

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 121 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 180

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQG 208
           QAEQ            S DS+ PI+YN+STID+KLK+NQG
Sbjct: 181 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQG 220

[Close]

BLAST of HG10006821 vs. NCBI nr
Match: TYK10817.1 (protein trichome birefringence-like 14 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 4.1e-82
Identity = 169/219 (77.17%), Postives = 187/219 (85.39%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 18  MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 77

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 78  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 137

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 138 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 197

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQ 207
           QAEQ            S DS+ PI+YN+STID+KLK+NQ
Sbjct: 198 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQ 236

[Close]

BLAST of HG10006821 vs. ExPASy TrEMBL
Match: A0A0A0LHP3 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000080 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.6e-87
Identity = 175/222 (78.83%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMC VIIMLTWEKTPLLNT PPPQTRLQLS DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCTVIIMLTWEKTPLLNTIPPPQTRLQLSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQIV 120
             QQ HT EYVP+FEDKN V+NQEARR  SHSYSNEEDTVSSQNKGN IGSRE THKQIV
Sbjct: 61  SGQQEHTSEYVPIFEDKNTVSNQEARRPSSHSYSNEEDTVSSQNKGNHIGSREVTHKQIV 120

Query: 121 ELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQ 180
           ELRNDGNSGSPKEII DETIHNQIVV+GK APIKKE LKPKP+++DEKI++ VEENYS Q
Sbjct: 121 ELRNDGNSGSPKEIIEDETIHNQIVVKGKTAPIKKEVLKPKPKELDEKIEEAVEENYSSQ 180

Query: 181 AEQ------------SADSMLPIIYNVSTIDDKLKRNQGAEY 211
           AEQ            S DS+LPI+YN+STID+KLK+NQ   Y
Sbjct: 181 AEQSVEENYSRQAEESVDSVLPIVYNISTIDEKLKKNQACNY 222

[Close]

BLAST of HG10006821 vs. ExPASy TrEMBL
Match: A0A1S3CBT7 (protein trichome birefringence-like 14 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498901 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.1e-83
Identity = 170/223 (76.23%), Postives = 189/223 (84.75%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 61  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 120

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 121 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 180

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQGAEY 211
           QAEQ            S DS+ PI+YN+STID+KLK+NQ  +Y
Sbjct: 181 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQACDY 223

[Close]

BLAST of HG10006821 vs. ExPASy TrEMBL
Match: A0A1S3CBG6 (protein trichome birefringence-like 14 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498901 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83
Identity = 170/220 (77.27%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 1   MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 60

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 61  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 120

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 121 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 180

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQG 208
           QAEQ            S DS+ PI+YN+STID+KLK+NQG
Sbjct: 181 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQG 220

[Close]

BLAST of HG10006821 vs. ExPASy TrEMBL
Match: A0A5D3CFP8 (Protein trichome birefringence-like 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001330 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.0e-82
Identity = 169/219 (77.17%), Postives = 187/219 (85.39%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISP 60
           MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP
Sbjct: 18  MKKGFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLNTIPPPQTRLQVSLDRGRLVSISP 77

Query: 61  LEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQI 120
             QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+VSSQ+KGN IGS EATHK +
Sbjct: 78  SGQQGHTSEYVPIFEDKNTVSNQEEARRPFSHSYSNEEDSVSSQSKGNHIGSGEATHKLV 137

Query: 121 VELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSI 180
           VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS 
Sbjct: 138 VELRNDGNSGSPKEIIEDETIHNQIVVKGKRAPIKKEVLKPKTKELDGKKEQAVEENYSS 197

Query: 181 QAEQ------------SADSMLPIIYNVSTIDDKLKRNQ 207
           QAEQ            S DS+ PI+YN+STID+KLK+NQ
Sbjct: 198 QAEQSVEENYSRQAEESVDSVSPIVYNISTIDEKLKKNQ 236

[Close]

BLAST of HG10006821 vs. ExPASy TrEMBL
Match: A0A6J1DK84 (protein trichome birefringence-like 16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021862 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.3e-73
Identity = 157/213 (73.71%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 1   MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPD--RGRLVSI 60
           MKK FYGLRGKELSL+TIALMCMVIIMLTWEKTPLL+TFPPPQTRLQ S D   G LVS 
Sbjct: 1   MKKSFYGLRGKELSLVTIALMCMVIIMLTWEKTPLLSTFPPPQTRLQFSSDSLAGTLVSA 60

Query: 61  SPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIGSREATHKQ 120
           S LEQQGH  EY+P FEDKN VNNQE  R+FSHSYSN+EDT S QNK   +GSR ATHKQ
Sbjct: 61  SHLEQQGHADEYIPSFEDKNTVNNQEVGRAFSHSYSNDEDTTSFQNKRIAVGSRGATHKQ 120

Query: 121 IVELRNDGNSGSPKEIIVDETIHNQIVV-EGKKAPIKKEDLKPKPEKVDEKIKQVVEENY 180
           IVELR DG+SGSPKE+I DETI NQIVV EG +A  KKE  KPK  +VDEKIKQVVEENY
Sbjct: 121 IVELRTDGSSGSPKEMIEDETIRNQIVVEEGVEALRKKEVSKPKLLEVDEKIKQVVEENY 180

Query: 181 SIQAEQSADSMLPIIYNVSTIDDKLKRNQGAEY 211
           S Q +QS DS+LPI YNVS +D+KL+R+Q   Y
Sbjct: 181 SRQGKQSVDSVLPIAYNVSKVDEKLERDQACNY 213

The following BLAST results are available for this feature:

BLAST of HG10006821 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890327.1	3.6e-94	87.62	protein trichome birefringence-like 14 isoform X1 [Benincasa hispida] >XP_038890...	[more]
XP_004141075.1	3.3e-87	78.83	protein trichome birefringence-like 14 isoform X1 [Cucumis sativus] >KGN60499.1 ...	[more]
XP_008459933.1	2.2e-83	76.23	PREDICTED: protein trichome birefringence-like 14 isoform X1 [Cucumis melo] >XP_...	[more]
XP_008459948.1	6.4e-83	77.27	PREDICTED: protein trichome birefringence-like 14 isoform X2 [Cucumis melo]	[more]
TYK10817.1	4.1e-82	77.17	protein trichome birefringence-like 14 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of HG10006821 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHP3	1.6e-87	78.83	PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000080 PE=3 ...	[more]
A0A1S3CBT7	1.1e-83	76.23	protein trichome birefringence-like 14 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3CBG6	3.1e-83	77.27	protein trichome birefringence-like 14 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3CFP8	2.0e-82	77.17	Protein trichome birefringence-like 14 isoform X2 OS=Cucumis melo var. makuwa OX...	[more]
A0A6J1DK84	1.3e-73	73.71	protein trichome birefringence-like 16 isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of HG10006821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006821.1	HG10006821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:1990937	xylan acetylation
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0010411	xyloglucan metabolic process
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016407	acetyltransferase activity