HG10006780 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006780
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tetraspanin-2
Location	Chr07: 21947772 .. 21950896 (+)
RNA-Seq Expression	HG10006780
Synteny	HG10006780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTAAGCAACAAAATCACCGCAATTCTCAATTTCTTGGCCCTCCTCTGCTCCATCCCCATAATCGGCGCCGGAATTTGGTTGGCTTCAAAGCCCGACAACGAATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTCTTAATCCTCCTCGTTTCTTTAGCCGGCTTCATCGGCGCCTACTGGAACAGACAAGGCCTTCTCGCTTTTTACCTATTCTGTATGGCTCTTCTGATCGGCCTTTTGCTCGTTCTCCTCGTCTTCACCTTCGTCGTCACTCGCCCCGACGGAAGCTACACCGTCATGGGGCGAGGATTCAAAGAGTACCGGCTCGATGGATTCTCGTCGTGGCTTAAAAATCACCTGACGAATTCTAGAAATTGGCAGAACATAAGGAGGTGTTTGGCGGAATCTGATGTGTGTCCTAAGCTTAATCAGCAATACTTCGCCGCCGATCAGTTTTTCGCGGCGGACATTTCGCCACTCCAGGTCAGCGCATTAATTTCAAGATGAAAAATATATATATATATATATATATATATATATATGATTCTATCTTCTTCTGCTTCTTCGTTGTAATTTCTTGTTTGGATTAATGGTTTCGAGAGGAGGAGGATTCATTGGCGTTTTGGAGAAATTTTGTATAAATCGGGGTTTTCTCTCTCTGATACACGTTTTTGGCTTTTCGGACCGCAATCCTGGCCCCTGGGTCGGTGCTTTAAACTTTAAGCAAGAAAAATAAAAATATATTAAAAAAACTTAGGTTTAATTAAAGTTTAAACTTTAACTTTTTTAATTTTGTGTTAATAATTTTCTGCAATTTTGTTTCTAAATAGTTCCTTTTGATAGATTTGAAAGTTCTAAAATTTAATTGATTTATTTATGATGTATACATTTAAATTTTATATGGAATGAAATGTTAAGTCCAGTATCATTTAGGTATCGTTTGATAATCATTTCATTTTTTTTATTACTTTCACTGCTCTATTATACTTTTTCATTAATTAAAAGTTCCATTGAAATATATATATATATATTTCATGAAAAAAATCAAATCGTAGGTTAATTTTTTTTCTTTCTTTCTGAAAGAACGATGAAAACTAGTTCTAAATAGGTATTAAATTCATAAAAATTAAAATTGAACTCTTTAAAGTAAAGAAACAAAAATGAAAATAAGTTATATTTCCTAATTATTTTTTTTTAAAAAAAACAATTTTTTTGGAGGGGTGGTTTTCTCACTTTTCTGCGTAATTTTGAAATTTTCGGATATTTATTATTTTTTATAGTATTGGATTTATTTATTTATTATTCAATCGAAAATGATTTTTCACCCATCTCTATCATTTGTCTCAGCAGTGGCATGTGACTTGTTGACATTGGGCGTCCCAAGTCCCAACGACTTTTGCGGTCTAGAATAATCCTGTATTTAATGATAAGATTTTCCTACAATTGTTTTTTTTTCTTTTTTAAAAATTGCTTTATTTTGGAAACTTTGTCATGGCATTAACCAATTTCAACACTTGAAATGAAAAGATTACCTAACTGAGTTTTTATATCAATAAAGTGTAAATTGCTCATACTAGAGTGTAATAAAAACTTTCACTTTTATTAAAATTTCAGAGAAATTATATGTAATTCATTTTATCAGAAAATGACCATAAAATATATCTCCTAGTCCTATTATGGTTGAACTATTGAAATACTAGATTTAACATTTTAAAAAAACATATTTAGTAAAGGAAAATTTTCACTGATTGAAAAAATATCAAATTCTATCATTTCTATCACCCATAGGCCCTGATAGACTTTTATCAACGTCTATCACAACTATCTAAAAGTTTTGCTATTTTGTGTAAATAATTTCTCTTATTTTTTTTTAATTTTAAAAATTCTACTTTAAGTAGATGTTGAGGAAGATTGATATAAAGTGCTCTTCAACAAAAGAACTATATCCTATAGTCTTTAGTGAATTTCAAGGGTGTATTTATCCTATCTACATAGAATATTCATTTTTAATGTTTTGTTCTGTATTTACTGAGCAAGAATATAGAATCACTCTCTTTTTTTTGTTCTTCTCTTTTTCATGTGTTCATTTTGTTGGAACTTTCAACTAACCCACAGACTTACTAGGACAAAGGGACACAAATTTATGTAGATTTTGGGAAAAAGGTGAATTAGGATTAAGTAGACAGCTAAGATTTTATTGGGGACCCTTTTTGATTCCAAACTGATTGATCATATTCAAAATGGTTAAGATTGCCACACAAAATGGTTCAAGTGGGTGCCAGCTAATCAGTCCATTATGACTAATTGTTTAACTGCAAATTGGTCTCTACCATCAAAACTTTCCAACTCTAACTTTCTTCTTTTACACTCACTCTTGACTCTACTAAACACTCAAACTCAATTGATCGCATCATCTAGCATCGGGTTGTCCATCTAGTGTCGCGTTTTATGGATCATAAGTTTGAATTCCTTCCCCGGAAGTCAAAGAGGAGGTTGAAGCTCAAAACTTCCTTCCTAAAAGCAAATTGCATCTATACTTGACAGTAGTGATGTCTTACCTTATTGGTAGTAGGTCAAATCTCCTCCCTTTTCTAGTGTAATGTTCAAAAGTAAGAGACTTCTAAGTGGAACTTAAAAATTTAGACCTTGTTTGATAGACATTTGGTTATATAATTCAAACATTCAGTTAGAAAATATGAAAACTCGATAAAGAAATTGTATGAGAACAAGCACAATTTTCAATAACTACGGAGCTGCTTTTACCTCTTGGTTTTTACTGTGTATATGTGTGTGTGCAGTCAGGGTGCTGTAAACCTCCAACAGCTTGTGCATATAACTTTGTGAATCCAACACTGTGGCTGAACCCTGGTGATCCAATGGCTGACCCAGACTGCTATATTTGGAGCAATGACCAAACACAGTTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGAAGAGAATGGAGGAAAGCCAATGTGGTTCTCATTGTCACTGTGGTGGTCCTGATTTGGGTTTATGTTATCGGCTGCAGTGCCTTCAAGAATGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAAGGATGGATCTGA

mRNA sequence

ATGGGTTTAAGCAACAAAATCACCGCAATTCTCAATTTCTTGGCCCTCCTCTGCTCCATCCCCATAATCGGCGCCGGAATTTGGTTGGCTTCAAAGCCCGACAACGAATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTCTTAATCCTCCTCGTTTCTTTAGCCGGCTTCATCGGCGCCTACTGGAACAGACAAGGCCTTCTCGCTTTTTACCTATTCTGTATGGCTCTTCTGATCGGCCTTTTGCTCGTTCTCCTCGTCTTCACCTTCGTCGTCACTCGCCCCGACGGAAGCTACACCGTCATGGGGCGAGGATTCAAAGAGTACCGGCTCGATGGATTCTCGTCGTGGCTTAAAAATCACCTGACGAATTCTAGAAATTGGCAGAACATAAGGAGGTGTTTGGCGGAATCTGATTCAGGGTGCTGTAAACCTCCAACAGCTTGTGCATATAACTTTGTGAATCCAACACTGTGGCTGAACCCTGGTGATCCAATGGCTGACCCAGACTGCTATATTTGGAGCAATGACCAAACACAGTTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGAAGAGAATGGAGGAAAGCCAATGTGGTTCTCATTGTCACTGTGGTGGTCCTGATTTGGGTTTATGTTATCGGCTGCAGTGCCTTCAAGAATGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAAGGATGGATCTGA

Coding sequence (CDS)

ATGGGTTTAAGCAACAAAATCACCGCAATTCTCAATTTCTTGGCCCTCCTCTGCTCCATCCCCATAATCGGCGCCGGAATTTGGTTGGCTTCAAAGCCCGACAACGAATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTCTTAATCCTCCTCGTTTCTTTAGCCGGCTTCATCGGCGCCTACTGGAACAGACAAGGCCTTCTCGCTTTTTACCTATTCTGTATGGCTCTTCTGATCGGCCTTTTGCTCGTTCTCCTCGTCTTCACCTTCGTCGTCACTCGCCCCGACGGAAGCTACACCGTCATGGGGCGAGGATTCAAAGAGTACCGGCTCGATGGATTCTCGTCGTGGCTTAAAAATCACCTGACGAATTCTAGAAATTGGCAGAACATAAGGAGGTGTTTGGCGGAATCTGATTCAGGGTGCTGTAAACCTCCAACAGCTTGTGCATATAACTTTGTGAATCCAACACTGTGGCTGAACCCTGGTGATCCAATGGCTGACCCAGACTGCTATATTTGGAGCAATGACCAAACACAGTTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGAAGAGAATGGAGGAAAGCCAATGTGGTTCTCATTGTCACTGTGGTGGTCCTGATTTGGGTTTATGTTATCGGCTGCAGTGCCTTCAAGAATGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAAGGATGGATCTGA

Protein sequence

MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGFIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKNHLTNSRNWQNIRRCLAESDSGCCKPPTACAYNFVNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVVLIWVYVIGCSAFKNAQTEDLFRRYKQGWI

Homology

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BLAST of HG10006780 vs. NCBI nr
Match: XP_038890423.1 (tetraspanin-2-like [Benincasa hispida])

HSP 1 Score: 488.0 bits (1255), Expect = 4.7e-134
Identity = 238/269 (88.48%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLI LL+VLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIALLIVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LKNHLTNSRNW  IR CLAESD                        SGCCKPPTAC YNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLAESDVCPKLNQRYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

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BLAST of HG10006780 vs. NCBI nr
Match: XP_004141051.1 (tetraspanin-2 [Cucumis sativus] >KGN60543.1 hypothetical protein Csa_019435 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 236/269 (87.73%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVL+GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LK+HLTNSRNW  IR CLAESD                        SGCCKPPTAC +NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

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BLAST of HG10006780 vs. NCBI nr
Match: XP_008459286.1 (PREDICTED: tetraspanin-2 [Cucumis melo] >KAA0061498.1 tetraspanin-2 [Cucumis melo var. makuwa] >TYK10775.1 tetraspanin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 481.5 bits (1238), Expect = 4.4e-132
Identity = 234/269 (86.99%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LK+HLTNSRNW  IR CLAESD                        SGCCKPPTAC +NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

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BLAST of HG10006780 vs. NCBI nr
Match: XP_023545531.1 (tetraspanin-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.5 bits (1238), Expect = 4.4e-132
Identity = 234/269 (86.99%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAI+NFLALLCSIPIIGAGIWLASKPD ECIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLALLCSIPIIGAGIWLASKPDYECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LKNHLTNSRNW  IR CL ESD                        SGCCKPPTAC YNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLPESDVCSKLNQRYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVL+VTVV+
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLVVTVVI 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYK GWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKLGWI 269

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BLAST of HG10006780 vs. NCBI nr
Match: XP_022999519.1 (tetraspanin-2-like [Cucurbita maxima])

HSP 1 Score: 480.7 bits (1236), Expect = 7.4e-132
Identity = 234/269 (86.99%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAI+NFLALLCSIPIIGAGIWLASKPD ECIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLALLCSIPIIGAGIWLASKPDYECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LKNHLTNSRNW  IR CL ESD                        SGCCKPPTAC YNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLPESDVCSKLNQRYFAADQFFAVDISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLR+EWRKANVVLIVTVV+
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRKEWRKANVVLIVTVVI 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYK GWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKLGWI 269

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BLAST of HG10006780 vs. ExPASy Swiss-Prot
Match: Q9ZUN5 (Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.0e-108
Identity = 184/270 (68.15%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           M L+N +TAILN LALLCSIPI  +GIWLASKPDNEC++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGLLLV+L+F FVVTRPDGSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD-------------------------SGCCKPPTACAYN 180
           LK ++ +S+NW  +R CLA+++                         SGCCKPPTAC YN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVV 240
           FVNPTLWLNP +  AD DCY+WSNDQ+QLCYNCNSCKAGLLGNLR+EWRKAN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           VLIWVYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

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BLAST of HG10006780 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.2e-69
Identity = 127/268 (47.39%), Postives = 167/268 (62.31%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           M LSN +   +NF+ +L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI LL  L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LKNHLTNSRNWQNIRRCLAES------------------------DSGCCKPPTACAYNF 180
           L+  +  S  W+ IR CL+ +                         SGCCKPPT C + F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPT W++P D  AD DC  WSNDQ  LCY C+SCKAGLL N++ +W KA++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGW 245
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of HG10006780 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-55
Identity = 110/263 (41.83%), Postives = 148/263 (56.27%), Query Frame = 0


Query: 4   SNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SN +  ILNFL  L SIPI+  GIWL+ K   EC  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 123
                 LL  YLF M LLI L+  + VF FVVT       + G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSRNWQNIRRCLAES--------------------------DSGCCKPPTACAYNFV 183
            + N +NW  IR CL ES                           SGCCKP   C + +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W+K  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

[Close]

BLAST of HG10006780 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-54
Identity = 102/265 (38.49%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDN-ECIHFFRWPVVLLGVLILLVSLAG 60
           M  SN +  ++NFL  L SIPI+G GIWL+S+ ++ +C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I  L+  ++F + VT      TV+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKNHLTNSRNWQNIRRCLAES----------------------------DSGCCKPPTA 180
           WLK+ +++   W  I  CL +S                            +SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CAYNFVNPTLWLNPGDPMA-DPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVL 236
           C +++VN T W   G  +  + DC +WSNDQ+ LCY C+SCKAG+LG+L++ WRK +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]

BLAST of HG10006780 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.0e-54
Identity = 98/258 (37.98%), Postives = 160/258 (62.02%), Query Frame = 0


Query: 5   NKITAILNFLALLCSIPIIGAGIWLASKPDN-ECIHFFRWPVVLLGVLILLVSLAGFIGA 64
           + +  ++NF   L SIPI+G GIWL+S+ ++ +C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 124
            +  + L+  YLF M  +I  L+   +F +VVT       VM R + +Y L+ +S WLK+
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSRNWQNIRRCLAES----------------------------DSGCCKPPTACAYN 184
            +T++  W++I  C+ +S                            +SGCCKPPT C Y 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGDPMA-DPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTV 233
           +VN T+W+  G+ +  +PDC +W+NDQ  LCY C+SCKAG+LG+L++ WRK +V+ IV V
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

[Close]

BLAST of HG10006780 vs. ExPASy TrEMBL
Match: A0A0A0LFR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.6e-133
Identity = 236/269 (87.73%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVL+GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LK+HLTNSRNW  IR CLAESD                        SGCCKPPTAC +NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of HG10006780 vs. ExPASy TrEMBL
Match: A0A5A7V1S6 (Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.1e-132
Identity = 234/269 (86.99%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LK+HLTNSRNW  IR CLAESD                        SGCCKPPTAC +NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of HG10006780 vs. ExPASy TrEMBL
Match: A0A1S3CB14 (tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.1e-132
Identity = 234/269 (86.99%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LK+HLTNSRNW  IR CLAESD                        SGCCKPPTAC +NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of HG10006780 vs. ExPASy TrEMBL
Match: A0A6J1KHB0 (tetraspanin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493854 PE=3 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.6e-132
Identity = 234/269 (86.99%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSN ITAI+NFLALLCSIPIIGAGIWLASKPD ECIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLALLCSIPIIGAGIWLASKPDYECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           LKNHLTNSRNW  IR CL ESD                        SGCCKPPTAC YNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLPESDVCSKLNQRYFAADQFFAVDISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLR+EWRKANVVLIVTVV+
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRKEWRKANVVLIVTVVI 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYK GWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKLGWI 269

[Close]

BLAST of HG10006780 vs. ExPASy TrEMBL
Match: A0A6J1FGY8 (tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444073 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.2e-131
Identity = 231/269 (85.87%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           MG+SNKITAI+NFLALLCSIPIIGAGIWLASKPDN CIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRP+GSY+VMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD------------------------SGCCKPPTACAYNF 180
           L+NHLTNSRNW  IR CLAES+                        SGCCKPPTAC YNF
Sbjct: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPTLWLNPG+PMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR EWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of HG10006780 vs. TAIR 10
Match: AT2G19580.1 (tetraspanin2 )

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-109
Identity = 184/270 (68.15%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           M L+N +TAILN LALLCSIPI  +GIWLASKPDNEC++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGLLLV+L+F FVVTRPDGSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LKNHLTNSRNWQNIRRCLAESD-------------------------SGCCKPPTACAYN 180
           LK ++ +S+NW  +R CLA+++                         SGCCKPPTAC YN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVV 240
           FVNPTLWLNP +  AD DCY+WSNDQ+QLCYNCNSCKAGLLGNLR+EWRKAN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 246
           VLIWVYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of HG10006780 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-70
Identity = 127/268 (47.39%), Postives = 167/268 (62.31%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60
           M LSN +   +NF+ +L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI LL  L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LKNHLTNSRNWQNIRRCLAES------------------------DSGCCKPPTACAYNF 180
           L+  +  S  W+ IR CL+ +                         SGCCKPPT C + F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           VNPT W++P D  AD DC  WSNDQ  LCY C+SCKAGLL N++ +W KA++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGW 245
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of HG10006780 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 215.3 bits (547), Expect = 5.4e-56
Identity = 110/263 (41.83%), Postives = 148/263 (56.27%), Query Frame = 0


Query: 4   SNKITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SN +  ILNFL  L SIPI+  GIWL+ K   EC  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 123
                 LL  YLF M LLI L+  + VF FVVT       + G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSRNWQNIRRCLAES--------------------------DSGCCKPPTACAYNFV 183
            + N +NW  IR CL ES                           SGCCKP   C + +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W+K  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

[Close]

BLAST of HG10006780 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-55
Identity = 102/265 (38.49%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 1   MGLSNKITAILNFLALLCSIPIIGAGIWLASKPDN-ECIHFFRWPVVLLGVLILLVSLAG 60
           M  SN +  ++NFL  L SIPI+G GIWL+S+ ++ +C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I  L+  ++F + VT      TV+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKNHLTNSRNWQNIRRCLAES----------------------------DSGCCKPPTA 180
           WLK+ +++   W  I  CL +S                            +SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CAYNFVNPTLWLNPGDPMA-DPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVL 236
           C +++VN T W   G  +  + DC +WSNDQ+ LCY C+SCKAG+LG+L++ WRK +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]

BLAST of HG10006780 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-55
Identity = 98/258 (37.98%), Postives = 160/258 (62.02%), Query Frame = 0


Query: 5   NKITAILNFLALLCSIPIIGAGIWLASKPDN-ECIHFFRWPVVLLGVLILLVSLAGFIGA 64
           + +  ++NF   L SIPI+G GIWL+S+ ++ +C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 124
            +  + L+  YLF M  +I  L+   +F +VVT       VM R + +Y L+ +S WLK+
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSRNWQNIRRCLAES----------------------------DSGCCKPPTACAYN 184
            +T++  W++I  C+ +S                            +SGCCKPPT C Y 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGDPMA-DPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTV 233
           +VN T+W+  G+ +  +PDC +W+NDQ  LCY C+SCKAG+LG+L++ WRK +V+ IV V
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

The following BLAST results are available for this feature:

BLAST of HG10006780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890423.1	4.7e-134	88.48	tetraspanin-2-like [Benincasa hispida]	[more]
XP_004141051.1	1.1e-132	87.73	tetraspanin-2 [Cucumis sativus] >KGN60543.1 hypothetical protein Csa_019435 [Cuc...	[more]
XP_008459286.1	4.4e-132	86.99	PREDICTED: tetraspanin-2 [Cucumis melo] >KAA0061498.1 tetraspanin-2 [Cucumis mel...	[more]
XP_023545531.1	4.4e-132	86.99	tetraspanin-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022999519.1	7.4e-132	86.99	tetraspanin-2-like [Cucurbita maxima]	[more]

BLAST of HG10006780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUN5	6.0e-108	68.15	Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1	[more]
Q9FIQ5	4.2e-69	47.39	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]
Q8S8Q6	7.6e-55	41.83	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9M1E7	3.8e-54	38.49	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	5.0e-54	37.98	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of HG10006780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFR6	5.6e-133	87.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1	[more]
A0A5A7V1S6	2.1e-132	86.99	Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 ...	[more]
A0A1S3CB14	2.1e-132	86.99	tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1	[more]
A0A6J1KHB0	3.6e-132	86.99	tetraspanin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493854 PE=3 SV=1	[more]
A0A6J1FGY8	5.2e-131	85.87	tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444073 PE=3 SV=1	[more]

BLAST of HG10006780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19580.1	4.2e-109	68.15	tetraspanin2	[more]
AT5G46700.1	3.0e-70	47.39	Tetraspanin family protein	[more]
AT2G23810.1	5.4e-56	41.83	tetraspanin8	[more]
AT3G45600.1	2.7e-55	38.49	tetraspanin3	[more]
AT5G60220.1	3.5e-55	37.98	tetraspanin4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 65..93 score: 16.29 coord: 6..29 score: 26.06 coord: 38..64 score: 21.75
None	No IPR available	PANTHER	PTHR32191:SF0	TETRASPANIN-2	coord: 1..142 coord: 142..242
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 6..226 e-value: 3.0E-29 score: 102.4
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..142 coord: 142..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006780.1	HG10006780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0009554	megasporogenesis
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0010015	root morphogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma