HG10006753 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006753
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phosphotransferase
Location	Chr07: 21697991 .. 21698918 (-)
RNA-Seq Expression	HG10006753
Synteny	HG10006753

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACGGAAAGTTTCGAAGCCGGGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGAAAAATCGATCATACGCCGTCCCGCCGGTAAATCTTGCATCTCCTTCACGGCCACCGCTGTTGTGTAAATGGATAATCTCTTCGTTGTTCGCTTCAATTTATTTTTCCTTGCCGTGGGTATTTAATGATGAAGCACCAAGGATATGAGGGTTTTATAATTTTGAAAGTTGAGATTACGACGTAGATGTTAGTTACTGCTGATGGTTTTGTGGCTACTGCGGAGACTGACTTGATTTTAGACGTTTCAATTCTTGAGGTTTCTTAGTTTTGGTGCTGTTAGTTTGAGAATTGGAGTTTGTGTTGGATTTGGAGGATTGAATGAAATTATCGATTGAGAGAATTAAATAGTGTGGAATTTTGATATATTCGTTTTGGATGATTATCTCAACTTCTGGATTGGATTGGATTGCACTTTCGTAATTGATCTATTTGACAATGAAATAAAAGATTAAAAGAACAGCGGAATTTTGTATTAGCTGCTTTAATAATTCTGAGTTGAGTTCATTCGTAAAACCTCTCTATTGCAGAACTCCATCTTCAGCTGCTGTAGAGAGACAAGGAGTTTCAACATCAACTAAAGGCTCGACTGTGAGAATTTTTCTTTCTTAGGTTTTGCTTTCAAAGTAAATTGCCATGGTTATTAACTTATTATCAAGCATTAGATTGCTTATGATGACTTTGAATTTGCACAGTTTCCTGTTGCCAATGGAAGTGAACTTCGGATCCTACAGGATAAAAGTTCTGCTGTGGCAGAGGCCAAACAAGACGGTTGCACTGGTAATTTTAAGATCCTTGATTCCCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTCCCGCAGAATTCGTTGAATAG

mRNA sequence

ATGGAACGGAAAGTTTCGAAGCCGGGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGAAAAATCGATCATACGCCGTCCCGCCGAACTCCATCTTCAGCTGCTGTAGAGAGACAAGGAGTTTCAACATCAACTAAAGGCTCGACTATTGCTTATGATGACTTTGAATTTGCACAGTTTCCTGTTGCCAATGGAAGTGAACTTCGGATCCTACAGGATAAAAGTTCTGCTGTGGCAGAGGCCAAACAAGACGGTTGCACTGGTAATTTTAAGATCCTTGATTCCCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTCCCGCAGAATTCGTTGAATAG

Coding sequence (CDS)

ATGGAACGGAAAGTTTCGAAGCCGGGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGAAAAATCGATCATACGCCGTCCCGCCGAACTCCATCTTCAGCTGCTGTAGAGAGACAAGGAGTTTCAACATCAACTAAAGGCTCGACTATTGCTTATGATGACTTTGAATTTGCACAGTTTCCTGTTGCCAATGGAAGTGAACTTCGGATCCTACAGGATAAAAGTTCTGCTGTGGCAGAGGCCAAACAAGACGGTTGCACTGGTAATTTTAAGATCCTTGATTCCCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTCCCGCAGAATTCGTTGAATAG

Protein sequence

MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFEFAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE

Homology

[Close]

BLAST of HG10006753 vs. NCBI nr
Match: TYK10748.1 (hexokinase-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39
Identity = 92/117 (78.63%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MERKVS P NDREIMAPSSQIKRRKIDH PSRR+ SSAA+ER GVS STKGST       
Sbjct: 1   MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHGVSASTKGST------- 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
              FPVA+GSE RILQDKSSA+AEAKQDGCTGNFK+LDSPFGNFLLPVIPS  EF E
Sbjct: 61  ---FPVASGSEFRILQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFSE 107

[Close]

BLAST of HG10006753 vs. NCBI nr
Match: XP_022154669.1 (uncharacterized protein LOC111021873 isoform X1 [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 3.5e-39
Identity = 94/117 (80.34%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MERKVSKPGNDREIMAPSSQ KRRK D TPSRRT SSAAVER+ VS STKGST       
Sbjct: 1   MERKVSKPGNDREIMAPSSQSKRRKTDQTPSRRTLSSAAVERERVSASTKGST------- 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
              FPVA GSE RI Q KS AVA+AKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE
Sbjct: 61  ---FPVATGSEFRIQQAKSFAVAQAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 107

[Close]

BLAST of HG10006753 vs. NCBI nr
Match: KAG7030460.1 (hypothetical protein SDJN02_08807, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.0 bits (432), Expect = 6.0e-39
Identity = 92/117 (78.63%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MER+VSKP NDREIMAPSSQIKRRKIDHTPSRR  SS  VERQG+S STKGS        
Sbjct: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSIC------ 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
               PV++GSE RILQDKSSAVAEAKQD CTGNFKILDSPFGNFLLPVIPSPAE VE
Sbjct: 61  ----PVSSGSEFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 107

[Close]

BLAST of HG10006753 vs. NCBI nr
Match: KAG6599484.1 (hypothetical protein SDJN03_09262, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.0 bits (432), Expect = 6.0e-39
Identity = 92/117 (78.63%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MER+VSKP NDREIMAPSSQIKRRKIDHTPSRR  SS  VERQG+S STKGS        
Sbjct: 3   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSIC------ 62

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
               PV++GSE RILQDKSSAVAEAKQD CTGNFKILDSPFGNFLLPVIPSPAE VE
Sbjct: 63  ----PVSSGSEFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 109

[Close]

BLAST of HG10006753 vs. NCBI nr
Match: XP_004141024.1 (uncharacterized protein LOC101218541 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 90/117 (76.92%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MERKV  P NDREIMAPSSQIKRRKIDH PSRR+ SSAAVER GV  STKGST       
Sbjct: 1   MERKVPMPRNDREIMAPSSQIKRRKIDHPPSRRSSSSAAVERHGVLASTKGST------- 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
              FPVA+GSE R+LQDKSSA+AEAKQDGCTGNFK+LDSPFGNFLLPVIPS  EF E
Sbjct: 61  ---FPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 107

[Close]

BLAST of HG10006753 vs. ExPASy TrEMBL
Match: A0A5D3CHN8 (Hexokinase-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00610 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40
Identity = 92/117 (78.63%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MERKVS P NDREIMAPSSQIKRRKIDH PSRR+ SSAA+ER GVS STKGST       
Sbjct: 1   MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHGVSASTKGST------- 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
              FPVA+GSE RILQDKSSA+AEAKQDGCTGNFK+LDSPFGNFLLPVIPS  EF E
Sbjct: 61  ---FPVASGSEFRILQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFSE 107

[Close]

BLAST of HG10006753 vs. ExPASy TrEMBL
Match: A0A6J1DMU3 (uncharacterized protein LOC111021873 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021873 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 94/117 (80.34%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 1   MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
           MERKVSKPGNDREIMAPSSQ KRRK D TPSRRT SSAAVER+ VS STKGST       
Sbjct: 1   MERKVSKPGNDREIMAPSSQSKRRKTDQTPSRRTLSSAAVERERVSASTKGST------- 60

Query: 61  FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 118
              FPVA GSE RI Q KS AVA+AKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE
Sbjct: 61  ---FPVATGSEFRIQQAKSFAVAQAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 107

[Close]

BLAST of HG10006753 vs. ExPASy TrEMBL
Match: A0A5A7V2P5 (Phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00850 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.8e-28
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1  MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
          MERKVS P NDREIMAPSSQIKRRKIDH PSRR+ SSAA+ER  VS STKGST       
Sbjct: 1  MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHRVSASTKGST------- 60

Query: 61 FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKI 97
             FPVA+GSE RILQDKSSA+AEAKQDGCTGNFK+
Sbjct: 61 ---FPVASGSEFRILQDKSSAIAEAKQDGCTGNFKM 86

[Close]

BLAST of HG10006753 vs. ExPASy TrEMBL
Match: A0A1S3C8X8 (Phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103498127 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.8e-28
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1  MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
          MERKVS P NDREIMAPSSQIKRRKIDH PSRR+ SSAA+ER  VS STKGST       
Sbjct: 1  MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHRVSASTKGST------- 60

Query: 61 FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKI 97
             FPVA+GSE RILQDKSSA+AEAKQDGCTGNFK+
Sbjct: 61 ---FPVASGSEFRILQDKSSAIAEAKQDGCTGNFKM 86

[Close]

BLAST of HG10006753 vs. ExPASy TrEMBL
Match: A0A6J1G2N7 (Phosphotransferase OS=Cucurbita moschata OX=3662 GN=LOC111450243 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.4e-27
Identity = 72/96 (75.00%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1  MERKVSKPGNDREIMAPSSQIKRRKIDHTPSRRTPSSAAVERQGVSTSTKGSTIAYDDFE 60
          MER+VSKP NDREIMAPSSQIKRRKIDHTPSRR  SS  VERQG+S STKGS        
Sbjct: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSIC------ 60

Query: 61 FAQFPVANGSELRILQDKSSAVAEAKQDGCTGNFKI 97
              PVA+GSE RILQDKSSAVAEAKQD CTGNFK+
Sbjct: 61 ----PVASGSEFRILQDKSSAVAEAKQDCCTGNFKM 86

The following BLAST results are available for this feature:

BLAST of HG10006753 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10748.1	1.6e-39	78.63	hexokinase-1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_022154669.1	3.5e-39	80.34	uncharacterized protein LOC111021873 isoform X1 [Momordica charantia]	[more]
KAG7030460.1	6.0e-39	78.63	hypothetical protein SDJN02_08807, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6599484.1	6.0e-39	78.63	hypothetical protein SDJN03_09262, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004141024.1	1.8e-38	76.92	uncharacterized protein LOC101218541 isoform X1 [Cucumis sativus]	[more]

BLAST of HG10006753 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHN8	7.7e-40	78.63	Hexokinase-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DMU3	1.7e-39	80.34	uncharacterized protein LOC111021873 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7V2P5	8.8e-28	76.04	Phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00...	[more]
A0A1S3C8X8	8.8e-28	76.04	Phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103498127 PE=3 SV=1	[more]
A0A6J1G2N7	7.4e-27	75.00	Phosphotransferase OS=Cucurbita moschata OX=3662 GN=LOC111450243 PE=3 SV=1	[more]

BLAST of HG10006753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR48205	FAMILY NOT NAMED	coord: 12..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006753.1	HG10006753.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0001678	cellular glucose homeostasis
biological_process	GO:0051156	glucose 6-phosphate metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0019318	hexose metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004340	glucokinase activity
molecular_function	GO:0005536	glucose binding