HG10006700 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTCAGATCAGATTCCCAACCTTTTTTTTTATTATTATTATTATCATTATTATATTTGTTAAAAGTTTGTTTATTATTTAAGATTCTATCGTTTTTCAAATCGGTATTAAAAAAAGAAAATTTTTTAAAAATAGAAAAATTAGATAAAGTATATACCCAAAATAACAAAAATTTTATATATTTGTGATAGACGCCGGTAATAGACGCCAATAATAAAAATGATAGAAGCATATCATTGACTGTGTGTCAATGTCTCTTAGTGTTTTATTGTTGTATTCTGTAAATGGTTCAACATTTTTTCTATCTGTAAAAATTTTCTTAAAAAAACGTTGTTTTCAAATATAGAGAAATGAGTCAAACTATTTATAAATATTGAAATATTTAATTATATAGATTTTTATCGCTGATAGATAGTAAAATTTTTATATATTTGTAAGTAGTTTGATATTTTTTTTATTTATAATAATTTTCCTAAAAAAAAATATATCTTATACTTTGAGATTCATTACACCGTCCTTCATGTATTTTCTAGGTTGTAATTTCTTGTTTTCAATAAATCCTTAAATTTGTTTTGTTATTATTCTTTTACCATATTGGATTAAAAAAAAAAAAACTCCAAACTATTCATAAAATTTATTTGAAAAGACAAAACTAAAATAGAATGAATTTCAAACCAATTGGGTTTAAATGGTTAGTCTGTGTTTAGATTAGAGACGTCTATTCTCTATGTAGAGATCCACCCTGGGATGAGAACGGGGAAGGATTGGGGTGAAAACAATTTCGGTAAGCTAAACGGAATTCTCTCTCCTGTCCCTGCTCCCATCCCGCCCTATTCCCCATCCGTACATTGATTATCCAAATTTTAAATATTTTATTATTATTATTATTGTAACTATATGTACATAATTTTCTAAATTTTAAGTTTTATAGTTGAATATGACTGGATAATTTTATGTGTTTGAATCATAGAGTTGAACATTTAGAGTATTGATAATTATATAATATAATAGATTAATTATTTTGTTTATATTTAGGTGATCGTCTGAAAAAAAAATCTCTATAAATGAGGATTGTGGTATGAAATTAATCATTTTTTTATGAAAAACTAAGACCCATTTGGTAATCATTTTGTTTTTAGTTTTTAGTTTTTGATTTTTTATTTTTGAAAATTATGCCTCTAAACACACTCATTCCACGTCTACATTTTAATCTATTCTTTAATAATATTTTAAAAAATTAAGCAAAAATTTGAAAACTTATTTTTATTTTTGAAATTTGGCTAAGAATTGAACTCTCGTAATTAAGAAAGACGCAAACTATTGTAAAAATCAAGAAAAAATAAACTTGATAAAAAAAACTAAAAAATGAACTAGTTACCACACGAGATATGAGTATTTAGCTAGAAAAATAATAAAATAAAACATGTTTTGTTTAACTGGATTTTTTTTAACAAAAAAAAAAAAAACTAAAAGGGGATTAATTTCCTTGAAGAAATTCAACTACAGTTAATTTTTTACCTTAAATTTCTACATTTATCCTTATAAAAATTGACTAAAATTTTTGCAGAAATGGAAAATGAAATGAGAGACGCACCTGCCATGAACATCTAGTTTAATGTAAACTTGAATAGTTATTTTCATTTTAGAATATGATAGTTTATGCTTTAAAAAAATAGTTTATGAATCAAAACAAAATGTCAACCAAATATGACTCAATTTGGTTGAGTATTTTAGATTAAAAAAAAAAAAAATTATAGATTTGAATCTCTACTCGTATTGGTTGAATTAAAAAATAAAAATAGACAATCTTAAAAATTATAGTAGTAGGAAACTAATAATTTATTGTGTTATTATTTTTAAAAATAAGCACGTGTAAGTGACACTTCACTTTTTTTTTCTTTTTTTTTTTTAAATAAAAAAAGAAAGAGAAAAAATGTATAGCTTTAAAAAAAACTCTTTTTCTTGGTACTAACATTTTAAAAATCATATCTAATATTCATTTTTTAAATTAAAAGAAATTGAGGAATACATTTAGTGATTTTGTAAATACCCAACAAATTTCAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTAATCGTTTTTTTTTTGTTTTTTTTATTATTATAATTCTCTTTATAGCAATTTATTTAAATAATAAAATATAAAATAAAAAGGATTATTTTCAAAAATAAAAAAAATAGCAAACTATTTACAAATATATAAAATTTTTACTAACTATCTGAAATAGACCACGATAGACTTTTATCACTACGTGATAAACTGCAATAGACTTCTATCGCTCAGTAATAGAAGTTTATCGCGATCTATCGCAGTCCATCGTGGATAGACAATAAAAAATTTTTATATGATAAATAGTTTAATATTTTTTTCATTTATTATAATTTTTCAAATAAAAACAAACTTATTGAATTAAATTTATCATGGACTATGAAAGGAGTTCAATTTTCAAGGGGAAACACTCATTTAAGTACAATTTTGTGAAATTTGTGTTTAAGTACAACTTTGTAATTTTGGAGTTTGATTCGAATTTAATTTTTCAAATTTTAACTTATATTCTTTCTATTAAAATGTTAAAAATAGTTTTTTTTTTTAGCAAGTGAAACGTTGATATTGTCAAATGAAACATTATTTGCAAGTATCAAAACAAAGACCTAAAATAAATATATCATAACAAATATATTAAATTTATATTATTGCTTACGAGAGTTTCATTTTCAAGAGGAGAAAAATACTCATCATTATCCCTTCCATAATTTAAATACATTTTGTAAATTTGGAGTTTGATTCCAACTATTTTTTCTTTTTACTAAAATTGTAACTTAAGACCTTTCTACTAAAATTAACATTGTCAAATGATACTTTCTTTAATCAATATATCACAACAAATATATTAAATCATTAAAAAATGCATAATATGAACTAAACAAATTATATAGTATACGTGTAACGCCCTTGATTATTTATTAATATTTTATAAAAGATTGTGAGATATGTTGATCGTTTTTTAATTAAAAAAAATTACTTTCAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD Homology
BLAST of HG10006700 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus]) HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50 Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of HG10006700 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa]) HSP 1 Score: 205.3 bits (521), Expect = 3.4e-49 Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0
BLAST of HG10006700 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 168.7 bits (426), Expect = 3.5e-38 Identity = 93/137 (67.88%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of HG10006700 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36 Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of HG10006700 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36 Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 9.0e-13 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11 Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07 Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49 Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49 Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.7e-38 Identity = 93/137 (67.88%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36 Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A2N9H2C1 (HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33661 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.0e-32 Identity = 81/135 (60.00%), Postives = 99/135 (73.33%), Query Frame = 0
BLAST of HG10006700 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 8.6e-27 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of HG10006700 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 6.4e-14 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of HG10006700 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 6.4e-14 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of HG10006700 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of HG10006700 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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