HG10006700 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006700
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Heavy metal transport/detoxification superfamily protein
Location	Chr07: 21180601 .. 21184034 (-)
RNA-Seq Expression	HG10006700
Synteny	HG10006700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTCAGATCAGATTCCCAACCTTTTTTTTTATTATTATTATTATCATTATTATATTTGTTAAAAGTTTGTTTATTATTTAAGATTCTATCGTTTTTCAAATCGGTATTAAAAAAAGAAAATTTTTTAAAAATAGAAAAATTAGATAAAGTATATACCCAAAATAACAAAAATTTTATATATTTGTGATAGACGCCGGTAATAGACGCCAATAATAAAAATGATAGAAGCATATCATTGACTGTGTGTCAATGTCTCTTAGTGTTTTATTGTTGTATTCTGTAAATGGTTCAACATTTTTTCTATCTGTAAAAATTTTCTTAAAAAAACGTTGTTTTCAAATATAGAGAAATGAGTCAAACTATTTATAAATATTGAAATATTTAATTATATAGATTTTTATCGCTGATAGATAGTAAAATTTTTATATATTTGTAAGTAGTTTGATATTTTTTTTATTTATAATAATTTTCCTAAAAAAAAATATATCTTATACTTTGAGATTCATTACACCGTCCTTCATGTATTTTCTAGGTTGTAATTTCTTGTTTTCAATAAATCCTTAAATTTGTTTTGTTATTATTCTTTTACCATATTGGATTAAAAAAAAAAAAACTCCAAACTATTCATAAAATTTATTTGAAAAGACAAAACTAAAATAGAATGAATTTCAAACCAATTGGGTTTAAATGGTTAGTCTGTGTTTAGATTAGAGACGTCTATTCTCTATGTAGAGATCCACCCTGGGATGAGAACGGGGAAGGATTGGGGTGAAAACAATTTCGGTAAGCTAAACGGAATTCTCTCTCCTGTCCCTGCTCCCATCCCGCCCTATTCCCCATCCGTACATTGATTATCCAAATTTTAAATATTTTATTATTATTATTATTGTAACTATATGTACATAATTTTCTAAATTTTAAGTTTTATAGTTGAATATGACTGGATAATTTTATGTGTTTGAATCATAGAGTTGAACATTTAGAGTATTGATAATTATATAATATAATAGATTAATTATTTTGTTTATATTTAGGTGATCGTCTGAAAAAAAAATCTCTATAAATGAGGATTGTGGTATGAAATTAATCATTTTTTTATGAAAAACTAAGACCCATTTGGTAATCATTTTGTTTTTAGTTTTTAGTTTTTGATTTTTTATTTTTGAAAATTATGCCTCTAAACACACTCATTCCACGTCTACATTTTAATCTATTCTTTAATAATATTTTAAAAAATTAAGCAAAAATTTGAAAACTTATTTTTATTTTTGAAATTTGGCTAAGAATTGAACTCTCGTAATTAAGAAAGACGCAAACTATTGTAAAAATCAAGAAAAAATAAACTTGATAAAAAAAACTAAAAAATGAACTAGTTACCACACGAGATATGAGTATTTAGCTAGAAAAATAATAAAATAAAACATGTTTTGTTTAACTGGATTTTTTTTAACAAAAAAAAAAAAAACTAAAAGGGGATTAATTTCCTTGAAGAAATTCAACTACAGTTAATTTTTTACCTTAAATTTCTACATTTATCCTTATAAAAATTGACTAAAATTTTTGCAGAAATGGAAAATGAAATGAGAGACGCACCTGCCATGAACATCTAGTTTAATGTAAACTTGAATAGTTATTTTCATTTTAGAATATGATAGTTTATGCTTTAAAAAAATAGTTTATGAATCAAAACAAAATGTCAACCAAATATGACTCAATTTGGTTGAGTATTTTAGATTAAAAAAAAAAAAAATTATAGATTTGAATCTCTACTCGTATTGGTTGAATTAAAAAATAAAAATAGACAATCTTAAAAATTATAGTAGTAGGAAACTAATAATTTATTGTGTTATTATTTTTAAAAATAAGCACGTGTAAGTGACACTTCACTTTTTTTTTCTTTTTTTTTTTTAAATAAAAAAAGAAAGAGAAAAAATGTATAGCTTTAAAAAAAACTCTTTTTCTTGGTACTAACATTTTAAAAATCATATCTAATATTCATTTTTTAAATTAAAAGAAATTGAGGAATACATTTAGTGATTTTGTAAATACCCAACAAATTTCAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTAATCGTTTTTTTTTTGTTTTTTTTATTATTATAATTCTCTTTATAGCAATTTATTTAAATAATAAAATATAAAATAAAAAGGATTATTTTCAAAAATAAAAAAAATAGCAAACTATTTACAAATATATAAAATTTTTACTAACTATCTGAAATAGACCACGATAGACTTTTATCACTACGTGATAAACTGCAATAGACTTCTATCGCTCAGTAATAGAAGTTTATCGCGATCTATCGCAGTCCATCGTGGATAGACAATAAAAAATTTTTATATGATAAATAGTTTAATATTTTTTTCATTTATTATAATTTTTCAAATAAAAACAAACTTATTGAATTAAATTTATCATGGACTATGAAAGGAGTTCAATTTTCAAGGGGAAACACTCATTTAAGTACAATTTTGTGAAATTTGTGTTTAAGTACAACTTTGTAATTTTGGAGTTTGATTCGAATTTAATTTTTCAAATTTTAACTTATATTCTTTCTATTAAAATGTTAAAAATAGTTTTTTTTTTTAGCAAGTGAAACGTTGATATTGTCAAATGAAACATTATTTGCAAGTATCAAAACAAAGACCTAAAATAAATATATCATAACAAATATATTAAATTTATATTATTGCTTACGAGAGTTTCATTTTCAAGAGGAGAAAAATACTCATCATTATCCCTTCCATAATTTAAATACATTTTGTAAATTTGGAGTTTGATTCCAACTATTTTTTCTTTTTACTAAAATTGTAACTTAAGACCTTTCTACTAAAATTAACATTGTCAAATGATACTTTCTTTAATCAATATATCACAACAAATATATTAAATCATTAAAAAATGCATAATATGAACTAAACAAATTATATAGTATACGTGTAACGCCCTTGATTATTTATTAATATTTTATAAAAGATTGTGAGATATGTTGATCGTTTTTTAATTAAAAAAAATTACTTTCAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA

mRNA sequence

ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA

Coding sequence (CDS)

ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGCTGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA

Protein sequence

MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

Homology

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BLAST of HG10006700 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTT-ASSSC----LCLENEDNFDQKQPLMAKQTTSS--QLLGFK 60
           MGKLVM IGKVFSCFINTT +S+SC    L +E+ +NFDQKQPLM KQTTS+   LLGFK
Sbjct: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61  DAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTG 120
           D I HQN+TL L  NPKVV +RVSMHC+GCARRVEKHISKI+GV+S+KVDMERE VVVTG
Sbjct: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEHQ 137
           DVFPFEVMQCISKVKSVEILE Q
Sbjct: 121 DVFPFEVMQCISKVKSVEILEPQ 143

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BLAST of HG10006700 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 3.4e-49
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGF 60
           MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVV 120
           KD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK ISKI+GV+S+KVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEHQD 138
           TGDVFPFEVM+CISKVKSVEILE QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of HG10006700 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-38
Identity = 93/137 (67.88%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQN 60
           MGK V GIGKVFSCF+N+ ASSS  C E E  F+ KQPLM  Q  +S LL F D I+H N
Sbjct: 1   MGKAV-GIGKVFSCFMNSRASSS--CFEIEGTFEPKQPLMPNQ-PNSHLLRFNDVISHTN 60

Query: 61  QTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEV 120
           Q      NPKVV LRVSMHC+GCARRVEK+I KIEGVDS+KVD ER+ VVVTGDV  FEV
Sbjct: 61  Q----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTGDVSSFEV 120

Query: 121 MQCISKVKSVEILEHQD 138
           +QC+SKV+SVEILEHQ+
Sbjct: 121 IQCVSKVRSVEILEHQE 129

[Close]

BLAST of HG10006700 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36
Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQN 60
           MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H N
Sbjct: 1   MGKAV-GIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQ-PNSHLLRLNDVISHTN 60

Query: 61  QTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEV 120
           Q      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSYKVD ER+ VVVTGDV  FEV
Sbjct: 61  Q----QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEV 120

Query: 121 MQCISKVKSVEILEHQD 138
           +QC+SKV+SVEILE Q+
Sbjct: 121 IQCVSKVRSVEILEPQE 129

[Close]

BLAST of HG10006700 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36
Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQN 60
           MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H N
Sbjct: 1   MGKAV-GIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQ-PNSHLLRLNDVISHTN 60

Query: 61  QTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEV 120
           Q      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSYKVD ER+ VVVTGDV  FEV
Sbjct: 61  Q----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEV 120

Query: 121 MQCISKVKSVEILEHQD 138
           +QC+SKV+SVEILE Q+
Sbjct: 121 IQCVSKVRSVEILEPQE 129

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BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.0e-13
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 70  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKS 129
           +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 130 VE 132
            +
Sbjct: 310 AQ 311

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BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 43  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKV 102
           +T  ++    +D    + +T     + +VV L+VS+HC GC  +V KH+++++GV S+ +
Sbjct: 154 KTVEAEAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNI 213

Query: 103 DMEREMVVVTGDVFPFEVMQCISKVKSVE 132
           D   + V VTGD+ P E++  ISKVK+ +
Sbjct: 214 DFAAKKVTVTGDITPLEILDSISKVKNAQ 242

[Close]

BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 70  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKV 129
           +VV LRVS+  HC GC  +V+KH+SK++GV S+ +D   + V VTGD+ P EV+ C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 130 KSVE 132
           K+ +
Sbjct: 228 KNAQ 231

[Close]

BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07
Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 58  HQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFP 117
           H N  L + L+  +V L V M C GC ++V + ISK++GVD+ ++D++R+ V VTG V  
Sbjct: 6   HGNSRLPIALS--IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDR 65

Query: 118 FEVMQCISK 127
            EV++ + +
Sbjct: 66  EEVLKMVKR 72

[Close]

BLAST of HG10006700 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 74  LRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKV-KSVEI 133
           L+V++HC GC  +V+K + KIEGV S K D+E+  V VTG++ P  +++ +SK  K  EI
Sbjct: 14  LKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEI 73

[Close]

BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGF 60
           MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVV 120
           KD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK ISKI+GV+S+KVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEHQD 138
           TGDVFPFEVM+CISKVKSVEILE QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGF 60
           MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVV 120
           KD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK ISKI+GV+S+KVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEHQD 138
           TGDVFPFEVM+CISKVKSVEILE QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.7e-38
Identity = 93/137 (67.88%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQN 60
           MGK V GIGKVFSCF+N+ ASSS  C E E  F+ KQPLM  Q  +S LL F D I+H N
Sbjct: 1   MGKAV-GIGKVFSCFMNSRASSS--CFEIEGTFEPKQPLMPNQ-PNSHLLRFNDVISHTN 60

Query: 61  QTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEV 120
           Q      NPKVV LRVSMHC+GCARRVEK+I KIEGVDS+KVD ER+ VVVTGDV  FEV
Sbjct: 61  Q----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTGDVSSFEV 120

Query: 121 MQCISKVKSVEILEHQD 138
           +QC+SKV+SVEILEHQ+
Sbjct: 121 IQCVSKVRSVEILEHQE 129

[Close]

BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQN 60
           MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H N
Sbjct: 1   MGKAV-GIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQ-PNSHLLRLNDVISHTN 60

Query: 61  QTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEV 120
           Q      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSYKVD ER+ VVVTGDV  FEV
Sbjct: 61  Q----QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEV 120

Query: 121 MQCISKVKSVEILEHQD 138
           +QC+SKV+SVEILE Q+
Sbjct: 121 IQCVSKVRSVEILEPQE 129

[Close]

BLAST of HG10006700 vs. ExPASy TrEMBL
Match: A0A2N9H2C1 (HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33661 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.0e-32
Identity = 81/135 (60.00%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLC---LENEDNFDQKQPLMAKQTTSSQLLGFKDAIA 60
           MGKL    GKV  CF  ++ SSSC C   LE  D F+ K PL+A  +  SQLL  KD +A
Sbjct: 1   MGKL--SFGKVLDCFSLSSCSSSCFCMNTLETHDEFESK-PLIA--SDKSQLLRLKDVVA 60

Query: 61  HQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFP 120
             NQTLA  L PK+V LRVSMHC+GCAR+VEKHISK+EGV SYKVD+E +MVVVTGD+ P
Sbjct: 61  -GNQTLAFQLKPKMVMLRVSMHCNGCARKVEKHISKMEGVTSYKVDLETKMVVVTGDILP 120

Query: 121 FEVMQCISKVKSVEI 133
           FEV++ +SKVK+ E+
Sbjct: 121 FEVLESVSKVKNAEL 129

[Close]

BLAST of HG10006700 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-27
Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 1   MGKLVMGIGKVFSCFINTTASSSCLCLE---NEDNFDQKQPLMAKQT-TSSQLLGFKDAI 60
           MGKL   IG+V+ C    T   SC CL    +E+   +K+PL+   T  S +++  KD +
Sbjct: 1   MGKL-QKIGRVWDCLFLPTNQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKDVV 60

Query: 61  -AHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDV 120
            A   QTLA HL PK+V L+VSMHC GCA++VEKHISK++GV  YKV++E + VVV G++
Sbjct: 61  AADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNI 120

Query: 121 FPFEVMQCISKVKSVEI 133
            P +V++ I KVK+ ++
Sbjct: 121 LPVDVLESICKVKNAQL 136

[Close]

BLAST of HG10006700 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-14
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 70  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKS 129
           +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 130 VE 132
            +
Sbjct: 310 AQ 311

[Close]

BLAST of HG10006700 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-14
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 70  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKS 129
           +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 130 VE 132
            +
Sbjct: 310 AQ 311

[Close]

BLAST of HG10006700 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 43  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKV 102
           +T  ++    +D    + +T     + +VV L+VS+HC GC  +V KH+++++GV S+ +
Sbjct: 154 KTVEAEAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNI 213

Query: 103 DMEREMVVVTGDVFPFEVMQCISKVKSVE 132
           D   + V VTGD+ P E++  ISKVK+ +
Sbjct: 214 DFAAKKVTVTGDITPLEILDSISKVKNAQ 242

[Close]

BLAST of HG10006700 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 70  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKV 129
           +VV LRVS+  HC GC  +V+KH+SK++GV S+ +D   + V VTGD+ P EV+ C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 130 KSVE 132
           K+ +
Sbjct: 228 KNAQ 231

The following BLAST results are available for this feature:

BLAST of HG10006700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736582.1	1.4e-50	77.62	uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetica...	[more]
XP_008458177.1	3.4e-49	75.34	PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 cop...	[more]
XP_022999545.1	3.5e-38	67.88	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022946348.1	3.3e-36	66.42	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]	[more]
KAG7030420.1	3.3e-36	66.42	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of HG10006700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	9.0e-13	54.84	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.7e-11	34.83	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8RXH8	1.7e-11	50.00	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
B3H6D0	9.6e-07	39.13	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q0WV37	1.3e-06	45.90	Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX...	[more]

BLAST of HG10006700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1Y2	1.6e-49	75.34	Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3C8H9	1.6e-49	75.34	uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=...	[more]
A0A6J1KFP0	1.7e-38	67.88	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1G3J1	1.6e-36	66.42	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A2N9H2C1	9.0e-32	60.00	HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33661 PE=4...	[more]

BLAST of HG10006700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24450.1	8.6e-27	45.99	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.2	6.4e-14	54.84	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	6.4e-14	54.84	Heavy metal transport/detoxification superfamily protein	[more]
AT2G37390.1	1.2e-12	34.83	Chloroplast-targeted copper chaperone protein	[more]
AT3G53530.1	1.2e-12	50.00	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 74..117 e-value: 1.3E-12 score: 47.9
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 77..127 score: 11.429252
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 74..115 e-value: 4.42855E-11 score: 52.9933
None	No IPR available	GENE3D	3.30.70.100		coord: 68..132 e-value: 5.4E-17 score: 63.8
None	No IPR available	PANTHER	PTHR46119:SF11	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 8..135
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 8..135
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 70..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006700.1	HG10006700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding