
HG10006680 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATAAAAAATCCTCTTCAATGGCGGCAGTTCTGTTTCTTCATCCTCTTCCTCTTCATCTCTCAGCTTCTCCATTCCTCCCATGGCGATGTCGGCTCTGCAGCCAAATACCCTCCGCCATACTCCCGTAAGAATTTCCAAGAAATTTCTGTTCGATTTCGAATACCTAATTAGTTAGTTAAAGTTTGGGGATTTTGAATTAATTTCATTTTGGTTGATGCAGCGACGGCGTGTTTCGGTGGGGATTTGAGTCAGTTTCCGACGAACAATATGTTCGCGGCGGCGGCGGATGGAATTTGGGAGAACGGAGCGGCGTGTGGGAGACAGTATTTTGTAAGGTGTTTCAGTGCGTCGGAGGCGGAGGCGTGTGTGGCGGAGCAGACGGTGCAGATTACGATTGTGGATTATATTGAATCGATTGTTTCGACTCCGACGGCGAGGGGAACTATGATGGCTCTGTCCACGACGGCGTATAATGCTATCGTTAATACCTCCGCTGCTGTTGATTTCGTCACCATTGAATTTCTCCAGTAA ATGTTGATAAAAAATCCTCTTCAATGGCGGCAGTTCTGTTTCTTCATCCTCTTCCTCTTCATCTCTCAGCTTCTCCATTCCTCCCATGGCGATGTCGGCTCTGCAGCCAAATACCCTCCGCCATACTCCCCGACGGCGTGTTTCGGTGGGGATTTGAGTCAGTTTCCGACGAACAATATGTTCGCGGCGGCGGCGGATGGAATTTGGGAGAACGGAGCGGCGTGTGGGAGACAGTATTTTGTAAGGTGTTTCAGTGCGTCGGAGGCGGAGGCGTGTGTGGCGGAGCAGACGGTGCAGATTACGATTGTGGATTATATTGAATCGATTGTTTCGACTCCGACGGCGAGGGGAACTATGATGGCTCTGTCCACGACGGCGTATAATGCTATCGTTAATACCTCCGCTGCTGTTGATTTCGTCACCATTGAATTTCTCCAGTAA ATGTTGATAAAAAATCCTCTTCAATGGCGGCAGTTCTGTTTCTTCATCCTCTTCCTCTTCATCTCTCAGCTTCTCCATTCCTCCCATGGCGATGTCGGCTCTGCAGCCAAATACCCTCCGCCATACTCCCCGACGGCGTGTTTCGGTGGGGATTTGAGTCAGTTTCCGACGAACAATATGTTCGCGGCGGCGGCGGATGGAATTTGGGAGAACGGAGCGGCGTGTGGGAGACAGTATTTTGTAAGGTGTTTCAGTGCGTCGGAGGCGGAGGCGTGTGTGGCGGAGCAGACGGTGCAGATTACGATTGTGGATTATATTGAATCGATTGTTTCGACTCCGACGGCGAGGGGAACTATGATGGCTCTGTCCACGACGGCGTATAATGCTATCGTTAATACCTCCGCTGCTGTTGATTTCGTCACCATTGAATTTCTCCAGTAA MLIKNPLQWRQFCFFILFLFISQLLHSSHGDVGSAAKYPPPYSPTACFGGDLSQFPTNNMFAAAADGIWENGAACGRQYFVRCFSASEAEACVAEQTVQITIVDYIESIVSTPTARGTMMALSTTAYNAIVNTSAAVDFVTIEFLQ Homology
BLAST of HG10006680 vs. NCBI nr
Match: XP_038890657.1 (EG45-like domain containing protein 2 [Benincasa hispida]) HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63 Identity = 128/147 (87.07%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of HG10006680 vs. NCBI nr
Match: XP_008457905.1 (PREDICTED: EG45-like domain containing protein 2 [Cucumis melo] >XP_008457913.1 PREDICTED: EG45-like domain containing protein 2 [Cucumis melo] >XP_016902443.1 PREDICTED: EG45-like domain containing protein 2 [Cucumis melo]) HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of HG10006680 vs. NCBI nr
Match: KAA0061583.1 (EG45-like domain containing protein 2 [Cucumis melo var. makuwa] >TYJ97792.1 EG45-like domain containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of HG10006680 vs. NCBI nr
Match: XP_004139328.1 (EG45-like domain containing protein 2 [Cucumis sativus] >XP_031737000.1 EG45-like domain containing protein 2 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 5.9e-60 Identity = 124/148 (83.78%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of HG10006680 vs. NCBI nr
Match: KGN60653.1 (hypothetical protein Csa_019201 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 5.9e-60 Identity = 124/148 (83.78%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.0e-06 Identity = 34/121 (28.10%), Postives = 55/121 (45.45%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy TrEMBL
Match: A0A1S4E2J4 (EG45-like domain containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103497475 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy TrEMBL
Match: A0A5D3BDE6 (EG45-like domain containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00020 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy TrEMBL
Match: A0A0A0LFX5 (Expansin-like EG45 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G005990 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60 Identity = 124/148 (83.78%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy TrEMBL
Match: A0A6J1G4A9 (putative EG45-like domain containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450611 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.9e-56 Identity = 109/142 (76.76%), Postives = 125/142 (88.03%), Query Frame = 0
BLAST of HG10006680 vs. ExPASy TrEMBL
Match: A0A6J1KF68 (EG45-like domain containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111493758 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.9e-56 Identity = 110/143 (76.92%), Postives = 126/143 (88.11%), Query Frame = 0
BLAST of HG10006680 vs. TAIR 10
Match: AT2G18660.1 (plant natriuretic peptide A ) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 34/121 (28.10%), Postives = 55/121 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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