HG10006673 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006673
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger CCCH domain-containing protein 39-like
Location	Chr07: 20912877 .. 20914229 (+)
RNA-Seq Expression	HG10006673
Synteny	HG10006673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGTTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAGGTACAACAGTCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATTCATCCTTGAATTCTAGAGTGCACCCACCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCAAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCACCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTCTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCACGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATGAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGAAATGTTAGGCCTTCATTCTGGAAGACGAAGTTATGCACCAAGTGGGAGATTACAGGTCACTGCCCCTTCGGTGACAAGTGTCATTTTGCTCATGGCCAATCTGGTATTGATAGATCTCTTTCTTCTCTTTTTCTCATAATGGTCAAGGAATATAATTCTTTTATCTGAATGGAACCCAATAGTTAGTTGTAACATGTGAAATAGAATTCTGAGTATCCATTTGATTTACTGAAGATCATGATATGCCTTGAATGATCTTCACTGTTAGTTAACACAACACAACAATGTTCAGTTTGAATCATTTGTTACTTCATTTGTTTAGTATTTATGTTCTGTCCTGTGTGAATCTGTTAACATTGTGATTACTGATTATGCATACTACTTTGAGAGATGCTGACTGTTATTAATGAATCAGAGTTACAACTATCTATTGGTGGACGTGAGGGGGAAGCATCTAGTGCTGCCCTCAATGTAAAGCCTCTAATTGTGGCCATGGAAGCACCTTCAAGTTTGACGACTAGTGTTCCATCCTCTGCTGTACCAGAGGGCCAGGCGAAGCAGTGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCACCAAGCTCAACAAGCAAAATGGAGGGTTGA

mRNA sequence

ATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGTTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAGGTACAACAGTCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATTCATCCTTGAATTCTAGAGTGCACCCACCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCAAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCACCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTCTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCACGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATGAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGAAATGTTAGGCCTTCATTCTGGAAGACGAAGTTATGCACCAAGTGGGAGATTACAGGTCACTGCCCCTTCGGTGACAAGTGTCATTTTGCTCATGGCCAATCTGAGTTACAACTATCTATTGGTGGACGTGAGGGGGAAGCATCTAGTGCTGCCCTCAATGTAAAGCCTCTAATTGTGGCCATGGAAGCACCTTCAAGTTTGACGACTAGTGTTCCATCCTCTGCTGTACCAGAGGGCCAGGCGAAGCAGTGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCACCAAGCTCAACAAGCAAAATGGAGGGTTGA

Coding sequence (CDS)

ATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGTTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAGGTACAACAGTCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATTCATCCTTGAATTCTAGAGTGCACCCACCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCAAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCACCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTCTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCACGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATGAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGAAATGTTAGGCCTTCATTCTGGAAGACGAAGTTATGCACCAAGTGGGAGATTACAGGTCACTGCCCCTTCGGTGACAAGTGTCATTTTGCTCATGGCCAATCTGAGTTACAACTATCTATTGGTGGACGTGAGGGGGAAGCATCTAGTGCTGCCCTCAATGTAAAGCCTCTAATTGTGGCCATGGAAGCACCTTCAAGTTTGACGACTAGTGTTCCATCCTCTGCTGTACCAGAGGGCCAGGCGAAGCAGTGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCACCAAGCTCAACAAGCAAAATGGAGGGTTGA

Protein sequence

MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTSVPSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG

Homology

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BLAST of HG10006673 vs. NCBI nr
Match: XP_008457806.1 (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KAA0061589.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa] >TYJ97798.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 670.2 bits (1728), Expect = 9.3e-189
Identity = 327/348 (93.97%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSN SLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSD SSY EPSRATSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQL I GREGE S+AALNVKPLIVAMEA SSLTTS
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYI-GREGEVSTAALNVKPLIVAMEASSSLTTS 300

Query: 301 V-PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           V PSSA+PEGQAK  LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

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BLAST of HG10006673 vs. NCBI nr
Match: XP_038890424.1 (zinc finger CCCH domain-containing protein 39 [Benincasa hispida])

HSP 1 Score: 668.7 bits (1724), Expect = 2.7e-188
Identity = 322/347 (92.80%), Postives = 330/347 (95.10%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYG-ANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEEN 60
           MSFND+RASV+ PPLHSYG ANGD SGCWSQFPRNDPFDP SQFEVQQ PFKRARNSEEN
Sbjct: 1   MSFNDMRASVLSPPLHSYGAANGDVSGCWSQFPRNDPFDPHSQFEVQQPPFKRARNSEEN 60

Query: 61  QSSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120
           QSSPIPYS+ SLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM
Sbjct: 61  QSSPIPYSSPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120

Query: 121 RQPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAK 180
           RQPPPNWQEIVGI+EDDQSVSNWNDDQKIIQK+KLCRKFYNGEECPYGDRCNFLHEDPAK
Sbjct: 121 RQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKLKLCRKFYNGEECPYGDRCNFLHEDPAK 180

Query: 181 FRDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           FRDD GRFRESSAISIGTTGTPLMNGSDSSYPEPSRATS SVSDALRANGN RPSFWKTK
Sbjct: 181 FRDDLGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSSSVSDALRANGNARPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLS+ GREGEASSAALNVKPLIV MEA SSL TS
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSL-GREGEASSAALNVKPLIVTMEASSSLATS 300

Query: 301 VPSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           VPSSA+ +GQ K CLLKWKGPKKINRIYADWLDDLPLSPS TSKMEG
Sbjct: 301 VPSSALLDGQVKPCLLKWKGPKKINRIYADWLDDLPLSPSPTSKMEG 346

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BLAST of HG10006673 vs. NCBI nr
Match: XP_004139420.1 (zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypothetical protein Csa_019214 [Cucumis sativus])

HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186
Identity = 323/348 (92.82%), Postives = 331/348 (95.11%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+RASVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSN SLNSR  PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNG+D SSY EPSR TSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQL I GREGE S+AALNVKPLIVAMEA SSLTT+
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYI-GREGEVSTAALNVKPLIVAMEASSSLTTN 300

Query: 301 -VPSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
            VPSSA+PEGQ K  LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of HG10006673 vs. NCBI nr
Match: XP_022946029.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata])

HSP 1 Score: 658.3 bits (1697), Expect = 3.7e-185
Identity = 313/346 (90.46%), Postives = 327/346 (94.51%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY N   NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKL 240
           RDDSGRFRESSAISIGTTGTPL+NGSDSSYPEP +A S SV DALRANGN RPSFWKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTSV 300
           CTKWEITGHCPFG+KCHFAHGQSELQLSI GREGE S+ ALNVKPL+VAMEAPSSL TSV
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSI-GREGEVSNTALNVKPLVVAMEAPSSLATSV 300

Query: 301 PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           PSSA+PEGQAKQ LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 345

[Close]

BLAST of HG10006673 vs. NCBI nr
Match: KAG6599412.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 654.8 bits (1688), Expect = 4.1e-184
Identity = 311/346 (89.88%), Postives = 326/346 (94.22%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 233 MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 292

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY N   NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 293 SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 352

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 353 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 412

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKL 240
           RDDSGRFRESSAISIGTTGTPL+NGSDSSYPEP +A S SV DALRANGN RPSFWKTKL
Sbjct: 413 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 472

Query: 241 CTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTSV 300
           CTKWEITGHCPFG+KCHFAHGQSELQL I GREGE S+ ALNVKPL+VAMEAPSSL TSV
Sbjct: 473 CTKWEITGHCPFGEKCHFAHGQSELQLFI-GREGEVSNTALNVKPLVVAMEAPSSLATSV 532

Query: 301 PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           PSSA+PEGQAKQ LLKWKGPKKINRIYADWLDDLPLSP+STS++EG
Sbjct: 533 PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPNSTSQLEG 577

[Close]

BLAST of HG10006673 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-82
Identity = 169/339 (49.85%), Postives = 213/339 (62.83%), Query Frame = 0


Query: 40  QSQFEVQQSP-FKRARNSEENQSSP---IPYSNSS---LNSRVHPPNAPVNKGISNIFFK 99
           QSQ   Q  P  KR R  ++N  +P    P  +SS   +   ++PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS-------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPF 279
           IS+G T     + + S+  E +R  S  V   +   G V+  +WKT+LC K++ITG CPF
Sbjct: 229 ISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPF 288

Query: 280 GDKCHFAHGQSELQLSIGGREGEASS--AALNVKPLIVAMEA----PSSLTTSVPSSAVP 339
           GDKCHFAHGQ+EL  S+G  EGEA +  A++N + ++ A EA    P +  T+  S    
Sbjct: 289 GDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNE 348

Query: 340 EGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 346
           EG+ K+CLLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of HG10006673 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.5e-48
Identity = 109/304 (35.86%), Postives = 159/304 (52.30%), Query Frame = 0


Query: 79  NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS 138
           N   ++ I  +FFKT++C KF+ G C    +CNFAHG+E++R+PPPNWQEIV   E+   
Sbjct: 76  NTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEE--- 135

Query: 139 VSNWNDDQKI--------------------------IQKMKLCRKFYNGEECPYGDRCNF 198
            +   ++ +I                            K + C+KFY  E CPYGD C F
Sbjct: 136 ATEAREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTF 195

Query: 199 LHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNV- 258
           LH       D+  + RES AIS+    +P + G        S A + + + A   NG + 
Sbjct: 196 LH-------DEQSKARESVAISL----SPSVGGGGGGGSYNSAAAAAASASAAAGNGPMQ 255

Query: 259 RPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLSIGGR---EGEASSAALNVKPLIV 318
           +PS WKT++C KWE+TG+CPFG KCHFAHG +EL    GG    +   ++A  + K  +V
Sbjct: 256 KPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAVV 315

Query: 319 AMEAP----SSLTTSVPSSAV---------------PEGQAKQCLLKWKGPKKINRIYAD 334
           + +AP    ++ TT +P + V                 GQ ++ + KWKGP KI+RIY D
Sbjct: 316 SAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYGD 365

[Close]

BLAST of HG10006673 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.7e-45
Identity = 125/372 (33.60%), Postives = 170/372 (45.70%), Query Frame = 0


Query: 18  YGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNSSLNSRVHP 77
           +    D +  W+  P N   D          P K+ R S  + S+    + S+ ++R   
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSAT---TTSAASNR--- 95

Query: 78  PNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQ 137
                 K I  +FFKT++C KF+ G C    +CNFAH VE++R+PPPNWQEIV   E+++
Sbjct: 96  -----TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEER 155

Query: 138 SVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHE 197
           S         +++                      K + C+KFY  E CPYG+ C FLH 
Sbjct: 156 SGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH- 215

Query: 198 DPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGN----- 257
                 D++ R RES AIS+G  G     G  S         S S    L   G      
Sbjct: 216 ------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGS 275

Query: 258 ----VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKP- 317
               ++PS WKT++C KWEITG+CPFG KCHFAHG +EL    GG   E     ++  P 
Sbjct: 276 GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPD 335

Query: 318 ----------------LI---VAMEAPSSLTTSV----PSSAVPEGQAKQCLLKWKGPKK 335
                           L+   V   A +S  T V     SSAV +    +   KWKGP K
Sbjct: 336 TKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAK 383

[Close]

BLAST of HG10006673 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.1e-22
Identity = 75/208 (36.06%), Postives = 102/208 (49.04%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPY-GDRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAG-TCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCH 270
            G                    +V+  L++        WKT++C KW+ TG+CPFG  CH
Sbjct: 133 RG--------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHCH 192

Query: 271 FAHGQSELQLSIGGR-EGE---ASSAALNVK-----PLIVAMEAP--SSLTTSVPSSAVP 330
           FAHG SEL    GG  EGE    +SA L+ K       + ++ +P  SS  TS   +  P
Sbjct: 193 FAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQKP 251

Query: 331 EGQAKQCLLKWKGPKKINRIYADWLDDL 335
            G   Q   KWKGP KI+R+Y DW+DD+
Sbjct: 253 NGVRTQ--RKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of HG10006673 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.3e-11
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSY 210
           K+K C KF++   CP+G+ C+F H  P  ++            ++  T    +N  + + 
Sbjct: 39  KLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQ------------AVAKT----LNLGNPAV 98

Query: 211 PEPSRATSCSVSDALRANGNVRP-SFWKTKLCTKWEITGHCPFGDKCHFAHGQSEL 266
           P P+RA          A GN  P S  KT++CTK+     C FGDKCHFAHG+ EL
Sbjct: 99  PAPARAPMDHA-----AGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGEREL 133

[Close]

BLAST of HG10006673 vs. ExPASy TrEMBL
Match: A0A5A7V7E5 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00080 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 4.5e-189
Identity = 327/348 (93.97%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSN SLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSD SSY EPSRATSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQL I GREGE S+AALNVKPLIVAMEA SSLTTS
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYI-GREGEVSTAALNVKPLIVAMEASSSLTTS 300

Query: 301 V-PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           V PSSA+PEGQAK  LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of HG10006673 vs. ExPASy TrEMBL
Match: A0A1S3C7N3 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103497405 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 4.5e-189
Identity = 327/348 (93.97%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSN SLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSD SSY EPSRATSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQL I GREGE S+AALNVKPLIVAMEA SSLTTS
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYI-GREGEVSTAALNVKPLIVAMEASSSLTTS 300

Query: 301 V-PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           V PSSA+PEGQAK  LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of HG10006673 vs. ExPASy TrEMBL
Match: A0A0A0LKX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 7.2e-187
Identity = 323/348 (92.82%), Postives = 331/348 (95.11%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+RASVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSN SLNSR  PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNG+D SSY EPSR TSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTS 300
           LCTKWEITGHCPFGDKCHFAHGQSELQL I GREGE S+AALNVKPLIVAMEA SSLTT+
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYI-GREGEVSTAALNVKPLIVAMEASSSLTTN 300

Query: 301 -VPSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
            VPSSA+PEGQ K  LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of HG10006673 vs. ExPASy TrEMBL
Match: A0A6J1G2M8 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111450240 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.8e-185
Identity = 313/346 (90.46%), Postives = 327/346 (94.51%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY N   NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKL 240
           RDDSGRFRESSAISIGTTGTPL+NGSDSSYPEP +A S SV DALRANGN RPSFWKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTSV 300
           CTKWEITGHCPFG+KCHFAHGQSELQLSI GREGE S+ ALNVKPL+VAMEAPSSL TSV
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSI-GREGEVSNTALNVKPLVVAMEAPSSLATSV 300

Query: 301 PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           PSSA+PEGQAKQ LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 345

[Close]

BLAST of HG10006673 vs. ExPASy TrEMBL
Match: A0A6J1KJ53 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111493694 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.2e-181
Identity = 309/346 (89.31%), Postives = 322/346 (93.06%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFE QQ PFKRAR  EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEAQQPPFKRARTFEENQ 60

Query: 61  SSPIPYSNSSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY N   NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKL 240
           RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEP +A S SV DALRANGN RPSFWKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKPLIVAMEAPSSLTTSV 300
           CTKWEITGHCPFG+KCHFAHGQSELQLSI GREGE S+ ALNVKPL+VAMEAPS    SV
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSI-GREGEVSNTALNVKPLVVAMEAPS----SV 300

Query: 301 PSSAVPEGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347
           PSSA+PEGQAKQ LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 341

[Close]

BLAST of HG10006673 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-83
Identity = 169/339 (49.85%), Postives = 213/339 (62.83%), Query Frame = 0


Query: 40  QSQFEVQQSP-FKRARNSEENQSSP---IPYSNSS---LNSRVHPPNAPVNKGISNIFFK 99
           QSQ   Q  P  KR R  ++N  +P    P  +SS   +   ++PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS-------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPF 279
           IS+G T     + + S+  E +R  S  V   +   G V+  +WKT+LC K++ITG CPF
Sbjct: 229 ISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPF 288

Query: 280 GDKCHFAHGQSELQLSIGGREGEASS--AALNVKPLIVAMEA----PSSLTTSVPSSAVP 339
           GDKCHFAHGQ+EL  S+G  EGEA +  A++N + ++ A EA    P +  T+  S    
Sbjct: 289 GDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNE 348

Query: 340 EGQAKQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 346
           EG+ K+CLLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of HG10006673 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.5e-46
Identity = 125/372 (33.60%), Postives = 170/372 (45.70%), Query Frame = 0


Query: 18  YGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNSSLNSRVHP 77
           +    D +  W+  P N   D          P K+ R S  + S+    + S+ ++R   
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSAT---TTSAASNR--- 95

Query: 78  PNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQ 137
                 K I  +FFKT++C KF+ G C    +CNFAH VE++R+PPPNWQEIV   E+++
Sbjct: 96  -----TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEER 155

Query: 138 SVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHE 197
           S         +++                      K + C+KFY  E CPYG+ C FLH 
Sbjct: 156 SGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH- 215

Query: 198 DPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSCSVSDALRANGN----- 257
                 D++ R RES AIS+G  G     G  S         S S    L   G      
Sbjct: 216 ------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGS 275

Query: 258 ----VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLSIGGREGEASSAALNVKP- 317
               ++PS WKT++C KWEITG+CPFG KCHFAHG +EL    GG   E     ++  P 
Sbjct: 276 GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPD 335

Query: 318 ----------------LI---VAMEAPSSLTTSV----PSSAVPEGQAKQCLLKWKGPKK 335
                           L+   V   A +S  T V     SSAV +    +   KWKGP K
Sbjct: 336 TKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAK 383

[Close]

BLAST of HG10006673 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-23
Identity = 75/208 (36.06%), Postives = 102/208 (49.04%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPY-GDRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAG-TCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGSDSSYPEPSRATSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCH 270
            G                    +V+  L++        WKT++C KW+ TG+CPFG  CH
Sbjct: 133 RG--------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHCH 192

Query: 271 FAHGQSELQLSIGGR-EGE---ASSAALNVK-----PLIVAMEAP--SSLTTSVPSSAVP 330
           FAHG SEL    GG  EGE    +SA L+ K       + ++ +P  SS  TS   +  P
Sbjct: 193 FAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQKP 251

Query: 331 EGQAKQCLLKWKGPKKINRIYADWLDDL 335
            G   Q   KWKGP KI+R+Y DW+DD+
Sbjct: 253 NGVRTQ--RKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of HG10006673 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 28/107 (26.17%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 92  KTRMCAKF-KLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVSNWNDDQKIIQ 151
           KT +C K+ + G C  G  C FAHG++++R    + +                       
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPR----------------------Y 283

Query: 152 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 198
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 284 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 308

[Close]

BLAST of HG10006673 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 28/107 (26.17%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 92  KTRMCAKF-KLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVSNWNDDQKIIQ 151
           KT +C K+ + G C  G  C FAHG++++R    + +                       
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPR----------------------Y 282

Query: 152 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 198
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 283 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 307

The following BLAST results are available for this feature:

BLAST of HG10006673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457806.1	9.3e-189	93.97	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KA...	[more]
XP_038890424.1	2.7e-188	92.80	zinc finger CCCH domain-containing protein 39 [Benincasa hispida]	[more]
XP_004139420.1	1.5e-186	92.82	zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypo...	[more]
XP_022946029.1	3.7e-185	90.46	zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata]	[more]
KAG6599412.1	4.1e-184	89.88	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]

BLAST of HG10006673 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT81	1.6e-82	49.85	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	7.5e-48	35.86	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q9LQM3	7.7e-45	33.60	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5PP65	7.1e-22	36.06	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q7XPK1	3.3e-11	35.34	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of HG10006673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7E5	4.5e-189	93.97	Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3C7N3	4.5e-189	93.97	zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LKX6	7.2e-187	92.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1	[more]
A0A6J1G2M8	1.8e-185	90.46	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KJ53	1.2e-181	89.31	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of HG10006673 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19360.1	1.1e-83	49.85	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	5.5e-46	33.60	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	5.0e-23	36.06	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	2.1e-05	26.17	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	2.1e-05	26.17	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 149..176 e-value: 4.1E-5 score: 33.0 coord: 235..262 e-value: 6.9E-8 score: 42.2 coord: 90..116 e-value: 0.0021 score: 27.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 91..115 e-value: 3.5E-5 score: 23.6 coord: 236..262 e-value: 5.8E-11 score: 42.0 coord: 150..174 e-value: 1.4E-7 score: 31.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 235..263 score: 16.088787
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 149..177 score: 15.403383
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 90..117 score: 13.797847
None	No IPR available	GENE3D	4.10.1000.10		coord: 85..121 e-value: 9.2E-10 score: 39.7 coord: 149..178 e-value: 2.7E-7 score: 31.9 coord: 229..267 e-value: 7.4E-16 score: 59.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..215
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 1..335
None	No IPR available	PANTHER	PTHR12547:SF121	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 1..335
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 234..266
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 149..176
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 89..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006673.1	HG10006673.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding