HG10006659 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006659
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nuclear pore complex protein NUP205
Location	Chr07: 20772981 .. 20776695 (-)
RNA-Seq Expression	HG10006659
Synteny	HG10006659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGAAAACTGACCAAACAGAAACCGATGGTTTTTGGGGCAGTTTGCTGCTGACCAACAGGTTGGTTGTTTCTTTTAATTTTTAAATAGAAATACGTTTTCGGAGAGGAAAGAAGGTAGGAGCGTCGAATTGAGAGGGAAGTTGAAACTTGCAGAGGTGAGAGAGGAGAAATGGAGACTCGTGCACATGGAGGCTTTGGGGTTTCAAATTGAAGATGAAAACTAGAGAGGGTACAAACATCATTATCTCTATTTTTTTATATTCTAATTTTACCGTCGGTTAGTCGGTTTTCAGTAGCCTTGGTGGACCCGACTAACCTATGTTGGTTTCTCCAAAAACCAAAACCAAAACCGACTTTGACCCACTGATGGTTGTTTCGGTCGGTCGAGTCAGTTTTCAGTTCAAATGTGTTCACCCCTTACTTGGTTGTCCATGAGGTGGATGGTTGATGGTACTTTGTTGTCTTTTCAAAAGGATCATAACAACATTTGTAGATCAGTAAACTTTCACTGCCAAAAGTTGCCTAACTTGTTGGCGGAATATAATGCCTTATAATATCCAAAAAGAACCGTGAAAATCAAGTTTTAGGCCTGACATATTTTTGTTGAATAACATTTTGGTAAGTGTTTTATTTCTGTGATATCTTTATCTTATTATTATTTTTTGAAACATATCTTATTTACATTTCCCCCTTCTTTCATTTGATTGAATTTTGATGTATCATTTGTTTGTTTGTTTTTCTTCTTATTTTTTTGGTGAAGGTTTGGCCATATGAGGAGACTGATGAATATGGTTTTGTTCAAAGTCTCTTCCAATTGATGCATTCACTTTTCTCTCGTGAATTGAATTCTCTTTCTTCTGGCCCAGGAGCTAAATTGCTTAAGGTTGGTGTTTTTTTTTTCAGGAAAATTAAACTCAACCTATGAAATCTCTTTAAACTAAGTTCGTTAGTAACCAGCCTTTTAATGGCTATTTATTTATTATTATTTTTCCAGAACAGGAGAAGTTCAGAACTTTACTCCATTGAGCTGAATTTCAGTTTGATCTCTTATTTATATTTTCTAGTTACAAGGAAATCTCTAAGATTGCAGGTACTTCGTTTTCAGTGTTCTCATGCAGAAATGACCGACAAATTTGAATATGACCACTGGGATTTAATCATTGGAATTTGACTTTCTAATGTTATTCGTCCAGGTCTCTGGTGCTTCCTCCGGCCACAGCTCTTCTGTTACGTCTCAGCGGCCCTCTTTGGATTTGCTCGGGACTCTCCTTAATTCTATGACTACTACTCTAGAAAGAGCAGCTGAAGAAAGATCGTTGCTATTAAATAAGGTGCTTCCATGCAAGAGCAAACATCTTGCTACATTGTATTGTCCCCTTCCTAGTTGTTATATGGGTCAAATGCATCTTTGTCATGGTTTTCGATTTTGCAGATTCAAGAGATAAATGAACTGTCGAGACAGGATGTAGAGGAAATTATTGTACTGTGTATTGGCGAAGATTTTGCCTCATTATCCGATAACATCCAGAGAAGGTGCCTTTCTTCATATCATTTTTCTTAGCTTTGTTGAATACTTTATTCAGTGTTTCAAAGTGTTCATTTTTTTTTGTTAGTGGGCACATGACTCTGTTATCCTTCCATGTTATATGAGCATTAGTCTCTTTCATCCTTTCAATAAAAAGATTTGTCTCTTGTTTAAAAAAAAAGGTTTGCTGTTGTATCATTCCTAAAGGTTCATCTTGTTTTGCAGGAGATATGTTGCCATGATTGAAATGTGCAAGGTTGTTGGAAATAAAAATCAGATGATTACATTATTACTTCCTCTTGCTGAATATGTCTTAAATGTCATGCTTATCCATTTCCAAGATAGGTGAGTTATAAGATATATTTATCTCCCAGGATAATGTGATATTGCATTTACTAATGCTGACTTGTTATAAAATATGAACACGGCTCGGTTTATGGCATTTCTACTTCCTCTAGGGGGCCACTACTTGCATGTGATGTATTATTTTCAAAAAGATACCTTTTATGACGACATGATTGTACCATTTTCAGTTGGAATTATGCACACTTGGGTAAACAAGAGGCAGATCTTGTCACACTGTCAGTAATTTTTTCTTTTCTTTTGGCTTTGCAGCACTGTTATTCCTGATGGAAATGCGAGTATTAAAGCAATTTCATATCATGCCGAGTCTGACTCGACACAGGAAATAACTTCATTATGTGGAAAATTGATTCCTATCTTAGAAAGGCTTGAGTTGCTAAGTGAGGTATGCTTCTATTAATCACTCACTCCTTTACTACTTGCAATTAGTTGCTGTGCTTAAACAACGCAAACCTCCAATATTCTTGCTACTGAAAATTTGAACTATGAAATTCAATACCCTTCGGTCTAAATGGCAAGGTGTAATATTCAAGTGGTAGTGATTTTTTTAATAGTCGAGGTATGGGGGTTGGGGGACTGCATGCATTATATTCGTGGCACACTTCCGCTCATCTGAATAGTTTTTCACCAAGAGACTTGAACTCACGGGCTTGGAGAGAGTTTCTTAAATCTTGGTCATCCTTATCCTTCGGGTTAATTGCCCCTCAGTTTAATTTCATAATAACCTCTCTTAACCTTACCATATTTAGAATTCAGAAGCTTATCCTGATCAAAAGTTAATATACTATGTAAATGACCATCAAGATTTGAACACGCCATTTAAAGAATATTTGAATTCATAACATGCATGCATCTTTGGTCAATTGACAATTTTATGGTTGTTTTTAGCATTATTATTATCATCATCATCTGTGAATCAAGATATTTTGAGGAAATGTATTTAGATTTATGGTGGTCATCTGCTTAAAATCTTGAATATTTGAAAACAATTTATAAACACCAAACTTTGTAGGGTTAGATAATGAGGATGTTCAATCACCAATGAACCCAAAAAGTTAAGCTTATGGGTTACAGTAGATTTAATTATGTTAATACTTCAACATTTCTCCTCACTTATGGGATTGAAAATGTTAAATCGCTGATTGACCCAAAAGCTTAAGCTGATGAGTAAAGGCAAATTTAATATCAAATCATCTAACATAAAATTTGTAGATGGACCACAAGTAGAAATCAATATTAATTAACGAGAAAATGACATTATAAGGATTTGAACACAAGACCTCTTGCTCTCATACCATGTTAAATTACTAGTAGCTTAAAGCTGATGGGTTATCTTAAATTTAATCTTATATTTGTGAGTGGAAATCAATACTACTTGGAAAAGAAATCGCATTGCGAGAGTTAGAACATAGGACCTCCTGCTCTTGATCCCATGTTAAATCATCACTAAGACAAAAAGCTTAAACTAATAAGTTATGGTAAATTTAGTCTTATATCAATACCTTTTAACATATGATGAGTAAAAATGTGCATCATAATTTGGTTGACATACCTGTAGTTATCAAGAAGATATAATTGCTAGTTGACCATCCTTCCAATTTATTCAATACTTAGCGACACTTTGTGGTGGTTAAAATTCGTCCAAAGCTTTACAATTGTTTTCTTTTACTTCTGACCCTTTGCATGTCTGAAATGGAATATAATGTTTTTTTTTCCTTCTCTTTTTTGGTTGTGTTCCAGAATAAAGTAGGCCACAATCTCAAGGTGTTTCGCAGATTGGTGATTTCACTCAAGGAGCTAGCAATTCAAAAATTAGCTCTATGA

mRNA sequence

ATGCGGAAAACTGACCAAACAGAAACCGATGGTTTTTGGGGCAGTTTGCTGCTGACCAACAGGCCTGACATATTTTTGTTGAATAACATTTTGGTTTGGCCATATGAGGAGACTGATGAATATGGTTTTGTTCAAAGTCTCTTCCAATTGATGCATTCACTTTTCTCTCGTGAATTGAATTCTCTTTCTTCTGGCCCAGGAGCTAAATTGCTTAAGAACAGGAGAAGTTCAGAACTTTACTCCATTGAGCTGAATTTCAGTTTGATCTCTTATTTATATTTTCTAGTTACAAGGAAATCTCTAAGATTGCAGGTCTCTGGTGCTTCCTCCGGCCACAGCTCTTCTGTTACGTCTCAGCGGCCCTCTTTGGATTTGCTCGGGACTCTCCTTAATTCTATGACTACTACTCTAGAAAGAGCAGCTGAAGAAAGATCGTTGCTATTAAATAAGATTCAAGAGATAAATGAACTGTCGAGACAGGATGTAGAGGAAATTATTGTACTGTGTATTGGCGAAGATTTTGCCTCATTATCCGATAACATCCAGAGAAGGAGATATGTTGCCATGATTGAAATGTGCAAGGTTGTTGGAAATAAAAATCAGATGATTACATTATTACTTCCTCTTGCTGAATATGTCTTAAATGTCATGCTTATCCATTTCCAAGATAGCACTGTTATTCCTGATGGAAATGCGAGTATTAAAGCAATTTCATATCATGCCGAGTCTGACTCGACACAGGAAATAACTTCATTATGTGGAAAATTGATTCCTATCTTAGAAAGGCTTGAGTTGCTAAGTGAGAATAAAGTAGGCCACAATCTCAAGGTGTTTCGCAGATTGGTGATTTCACTCAAGGAGCTAGCAATTCAAAAATTAGCTCTATGA

Coding sequence (CDS)

ATGCGGAAAACTGACCAAACAGAAACCGATGGTTTTTGGGGCAGTTTGCTGCTGACCAACAGGCCTGACATATTTTTGTTGAATAACATTTTGGTTTGGCCATATGAGGAGACTGATGAATATGGTTTTGTTCAAAGTCTCTTCCAATTGATGCATTCACTTTTCTCTCGTGAATTGAATTCTCTTTCTTCTGGCCCAGGAGCTAAATTGCTTAAGAACAGGAGAAGTTCAGAACTTTACTCCATTGAGCTGAATTTCAGTTTGATCTCTTATTTATATTTTCTAGTTACAAGGAAATCTCTAAGATTGCAGGTCTCTGGTGCTTCCTCCGGCCACAGCTCTTCTGTTACGTCTCAGCGGCCCTCTTTGGATTTGCTCGGGACTCTCCTTAATTCTATGACTACTACTCTAGAAAGAGCAGCTGAAGAAAGATCGTTGCTATTAAATAAGATTCAAGAGATAAATGAACTGTCGAGACAGGATGTAGAGGAAATTATTGTACTGTGTATTGGCGAAGATTTTGCCTCATTATCCGATAACATCCAGAGAAGGAGATATGTTGCCATGATTGAAATGTGCAAGGTTGTTGGAAATAAAAATCAGATGATTACATTATTACTTCCTCTTGCTGAATATGTCTTAAATGTCATGCTTATCCATTTCCAAGATAGCACTGTTATTCCTGATGGAAATGCGAGTATTAAAGCAATTTCATATCATGCCGAGTCTGACTCGACACAGGAAATAACTTCATTATGTGGAAAATTGATTCCTATCTTAGAAAGGCTTGAGTTGCTAAGTGAGAATAAAGTAGGCCACAATCTCAAGGTGTTTCGCAGATTGGTGATTTCACTCAAGGAGCTAGCAATTCAAAAATTAGCTCTATGA

Protein sequence

MRKTDQTETDGFWGSLLLTNRPDIFLLNNILVWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISYLYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKIQEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAEYVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKVGHNLKVFRRLVISLKELAIQKLAL

Homology

[Close]

BLAST of HG10006659 vs. NCBI nr
Match: XP_038889841.1 (nuclear pore complex protein NUP205 isoform X2 [Benincasa hispida])

HSP 1 Score: 463.0 bits (1190), Expect = 1.9e-126
Identity = 245/264 (92.80%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFS E+NSLSSGPG KLLKNRRSSELYSIELN+SLISY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSLEMNSLSSGPGVKLLKNRRSSELYSIELNYSLISY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQ+S ASSGH+S V SQRPSLDLLGTLLNSMT+TLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLQISSASSGHNSPVRSQRPSLDLLGTLLNSMTSTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INEL RQDVEEIIVLCIG+ FASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1740 QDINELPRQDVEEIIVLCIGKYFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLN+MLIHFQDST+IPDGNA+IKAISYHAESDS QEITSLCGKLIPILERLELLSENKV
Sbjct: 1800 YVLNIMLIHFQDSTIIPDGNANIKAISYHAESDSAQEITSLCGKLIPILERLELLSENKV 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKELAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. NCBI nr
Match: XP_008457616.1 (PREDICTED: nuclear pore complex protein NUP205 [Cucumis melo])

HSP 1 Score: 463.0 bits (1190), Expect = 1.9e-126
Identity = 246/264 (93.18%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRELNS SSGPG KLLKNRR SELYSIELNFSLISY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSRELNSFSSGPGVKLLKNRRGSELYSIELNFSLISY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG+SSGH S V SQ PSLDLLGTLLNSMTTTLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLQVSGSSSGHKSPVRSQPPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INELSRQDVE IIVLC+GEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1740 QDINELSRQDVEGIIVLCVGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            Y+LNV+LIHFQDST IP GNA+IKAISYHAESDS QEITSLCGKLIPILERLELLSENKV
Sbjct: 1800 YILNVILIHFQDSTFIPSGNANIKAISYHAESDSAQEITSLCGKLIPILERLELLSENKV 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKELAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. NCBI nr
Match: XP_038889840.1 (nuclear pore complex protein NUP205 isoform X1 [Benincasa hispida])

HSP 1 Score: 463.0 bits (1190), Expect = 1.9e-126
Identity = 245/264 (92.80%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFS E+NSLSSGPG KLLKNRRSSELYSIELN+SLISY
Sbjct: 1621 VWPYEETDEYGFVQSLFQLMHSLFSLEMNSLSSGPGVKLLKNRRSSELYSIELNYSLISY 1680

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQ+S ASSGH+S V SQRPSLDLLGTLLNSMT+TLERAAEERSLLLNKI
Sbjct: 1681 LYFLVTRKSLRLQISSASSGHNSPVRSQRPSLDLLGTLLNSMTSTLERAAEERSLLLNKI 1740

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INEL RQDVEEIIVLCIG+ FASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1741 QDINELPRQDVEEIIVLCIGKYFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1800

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLN+MLIHFQDST+IPDGNA+IKAISYHAESDS QEITSLCGKLIPILERLELLSENKV
Sbjct: 1801 YVLNIMLIHFQDSTIIPDGNANIKAISYHAESDSAQEITSLCGKLIPILERLELLSENKV 1860

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1861 GHNLKVFRRLVTSLKELAIQKLAL 1884

[Close]

BLAST of HG10006659 vs. NCBI nr
Match: XP_011648678.1 (nuclear pore complex protein NUP205 [Cucumis sativus] >KGN60698.2 hypothetical protein Csa_019311 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.8e-124
Identity = 244/264 (92.42%), Postives = 249/264 (94.32%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRELNS SSGPG KLLKNRRSSELYSIELNFSLISY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSRELNSFSSGPGVKLLKNRRSSELYSIELNFSLISY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG SS H S V SQ PSLDLLGTLLNSMTTTLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLQVSGCSSSHKSPVRSQPPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INELSRQDVEEIIV C+GEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPL E
Sbjct: 1740 QDINELSRQDVEEIIVQCVGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLTE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            Y+LNV+LIHFQDST IP GNA+IKAISYHAESDS QEITSL GKLIPILERLELLSENKV
Sbjct: 1800 YILNVILIHFQDSTSIPSGNANIKAISYHAESDSAQEITSLSGKLIPILERLELLSENKV 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKELAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. NCBI nr
Match: XP_022143113.1 (nuclear pore complex protein NUP205 [Momordica charantia])

HSP 1 Score: 445.3 bits (1144), Expect = 4.2e-121
Identity = 237/264 (89.77%), Postives = 251/264 (95.08%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRE +SL+SGPG KLLKNRRSSELYSIELNFSL SY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSRESDSLTSGPGVKLLKNRRSSELYSIELNFSLSSY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRL+VSGASSG+SS V +QRPSLDLLG LLNS TTTLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLEVSGASSGYSSPVRAQRPSLDLLGILLNSTTTTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQ+VEEIIV C+G+DFASLSD+IQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1740 RDINELSRQEVEEIIVRCVGDDFASLSDDIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLNVMLIHFQDSTVIPDGNA++KAISYHAES S QEITSL GKLIPILERLELLSENK+
Sbjct: 1800 YVLNVMLIHFQDSTVIPDGNANVKAISYHAESRSAQEITSLSGKLIPILERLELLSENKI 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKE AIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKETAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. ExPASy Swiss-Prot
Match: F4KBW6 (Nuclear pore complex protein NUP205 OS=Arabidopsis thaliana OX=3702 GN=NUP205 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.8e-65
Identity = 142/261 (54.41%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWP+EE D YGFVQ LF +M  LF        + P   +L   + SEL   +L FSL SY
Sbjct: 1592 VWPFEENDGYGFVQGLFDMMSKLF-------IASPIKSILS--QGSELKLSQLRFSLTSY 1651

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVT+ SLRLQVS  S    SS   ++P+L LL +LL+ +T +LERAAE++SLLL+KI
Sbjct: 1652 LYFLVTKNSLRLQVSDDSL--DSSTKLRQPTLLLLASLLSHVTDSLERAAEKKSLLLHKI 1711

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQDV+ II +C  +++ + SDNI +RRY+AM+EMC++VGN++Q+ITLLL LAE
Sbjct: 1712 RDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVEMCQIVGNRDQLITLLLQLAE 1771

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            +VLN++LIH QD +V     +S +  SY ++S   QE+T LCGKL P ++RL LL+E KV
Sbjct: 1772 HVLNIILIHLQDRSV-----SSNERGSYGSKSHIQQEVTDLCGKLSPTIDRLALLNEGKV 1831

Query: 272  GHNLKVFRRLVISLKELAIQK 293
            GHNLKVF+RL  ++KE+AIQK
Sbjct: 1832 GHNLKVFQRLATTVKEMAIQK 1836

[Close]

BLAST of HG10006659 vs. ExPASy TrEMBL
Match: A0A1S3C611 (nuclear pore complex protein NUP205 OS=Cucumis melo OX=3656 GN=LOC103497263 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 9.4e-127
Identity = 246/264 (93.18%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRELNS SSGPG KLLKNRR SELYSIELNFSLISY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSRELNSFSSGPGVKLLKNRRGSELYSIELNFSLISY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG+SSGH S V SQ PSLDLLGTLLNSMTTTLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLQVSGSSSGHKSPVRSQPPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INELSRQDVE IIVLC+GEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1740 QDINELSRQDVEGIIVLCVGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            Y+LNV+LIHFQDST IP GNA+IKAISYHAESDS QEITSLCGKLIPILERLELLSENKV
Sbjct: 1800 YILNVILIHFQDSTFIPSGNANIKAISYHAESDSAQEITSLCGKLIPILERLELLSENKV 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKELAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. ExPASy TrEMBL
Match: A0A0A0LI17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006200 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 8.8e-125
Identity = 244/264 (92.42%), Postives = 249/264 (94.32%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRELNS SSGPG KLLKNRRSSELYSIELNFSLISY
Sbjct: 1619 VWPYEETDEYGFVQSLFQLMHSLFSRELNSFSSGPGVKLLKNRRSSELYSIELNFSLISY 1678

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG SS H S V SQ PSLDLLGTLLNSMTTTLERAAEERSLLLNKI
Sbjct: 1679 LYFLVTRKSLRLQVSGCSSSHKSPVRSQPPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 1738

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            Q+INELSRQDVEEIIV C+GEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPL E
Sbjct: 1739 QDINELSRQDVEEIIVQCVGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLTE 1798

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            Y+LNV+LIHFQDST IP GNA+IKAISYHAESDS QEITSL GKLIPILERLELLSENKV
Sbjct: 1799 YILNVILIHFQDSTSIPSGNANIKAISYHAESDSAQEITSLSGKLIPILERLELLSENKV 1858

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKELAIQKLAL
Sbjct: 1859 GHNLKVFRRLVTSLKELAIQKLAL 1882

[Close]

BLAST of HG10006659 vs. ExPASy TrEMBL
Match: A0A6J1CPX3 (nuclear pore complex protein NUP205 OS=Momordica charantia OX=3673 GN=LOC111013061 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121
Identity = 237/264 (89.77%), Postives = 251/264 (95.08%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSRE +SL+SGPG KLLKNRRSSELYSIELNFSL SY
Sbjct: 1620 VWPYEETDEYGFVQSLFQLMHSLFSRESDSLTSGPGVKLLKNRRSSELYSIELNFSLSSY 1679

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRL+VSGASSG+SS V +QRPSLDLLG LLNS TTTLERAAEERSLLLNKI
Sbjct: 1680 LYFLVTRKSLRLEVSGASSGYSSPVRAQRPSLDLLGILLNSTTTTLERAAEERSLLLNKI 1739

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQ+VEEIIV C+G+DFASLSD+IQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
Sbjct: 1740 RDINELSRQEVEEIIVRCVGDDFASLSDDIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 1799

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLNVMLIHFQDSTVIPDGNA++KAISYHAES S QEITSL GKLIPILERLELLSENK+
Sbjct: 1800 YVLNVMLIHFQDSTVIPDGNANVKAISYHAESRSAQEITSLSGKLIPILERLELLSENKI 1859

Query: 272  GHNLKVFRRLVISLKELAIQKLAL 296
            GHNLKVFRRLV SLKE AIQKLAL
Sbjct: 1860 GHNLKVFRRLVTSLKETAIQKLAL 1883

[Close]

BLAST of HG10006659 vs. ExPASy TrEMBL
Match: A0A6J1HLX9 (nuclear pore complex protein NUP205 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465407 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.3e-116
Identity = 224/262 (85.50%), Postives = 245/262 (93.51%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSREL+S +SGP  KLLKNRRSSEL+SI+LNFSLISY
Sbjct: 1619 VWPYEETDEYGFVQSLFQLMHSLFSRELDSRTSGPAVKLLKNRRSSELHSIQLNFSLISY 1678

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG SS H+S V SQRPSLDLLGTLLNSMT TLE+AAEER LLLNKI
Sbjct: 1679 LYFLVTRKSLRLQVSGTSSSHNSPVRSQRPSLDLLGTLLNSMTITLEKAAEERLLLLNKI 1738

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQ+VEEIIVLC+GEDFASLSDNIQRRRY+AMIEMCK+VGNK++MITLLLPLAE
Sbjct: 1739 RDINELSRQEVEEIIVLCLGEDFASLSDNIQRRRYIAMIEMCKIVGNKSEMITLLLPLAE 1798

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLNVMLIHFQDSTVIPDGNA+IKAISYH E +S  EI+SLCGKLIPILERLELLSENK+
Sbjct: 1799 YVLNVMLIHFQDSTVIPDGNANIKAISYHGELESGHEISSLCGKLIPILERLELLSENKI 1858

Query: 272  GHNLKVFRRLVISLKELAIQKL 294
            G N+KVF RL  S+KE+AIQKL
Sbjct: 1859 GENVKVFGRLASSVKEVAIQKL 1880

[Close]

BLAST of HG10006659 vs. ExPASy TrEMBL
Match: A0A6J1FI96 (nuclear pore complex protein NUP205 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444365 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.2e-115
Identity = 221/262 (84.35%), Postives = 244/262 (93.13%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWPYEETDEYGFVQSLFQLMHSLFSREL+S + GP  KLLKNRRSSEL+SI+LNFSLISY
Sbjct: 1619 VWPYEETDEYGFVQSLFQLMHSLFSRELDSRTPGPAVKLLKNRRSSELHSIQLNFSLISY 1678

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVTRKSLRLQVSG SS H+S V SQRPSLDLLGTLLNS T TLE+AAEER LLLNKI
Sbjct: 1679 LYFLVTRKSLRLQVSGTSSSHNSPVRSQRPSLDLLGTLLNSTTITLEKAAEERLLLLNKI 1738

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQ+VEEIIVLC+GEDFASLSDNIQRRRY+AMIEMCK+VGNK++MITLLLPLAE
Sbjct: 1739 RDINELSRQEVEEIIVLCLGEDFASLSDNIQRRRYIAMIEMCKIVGNKSEMITLLLPLAE 1798

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            YVLNVMLIHFQDS+VIPDGNA+IKAI+YH E +S  EI+SLCGKLIP+LERLELLSENK+
Sbjct: 1799 YVLNVMLIHFQDSSVIPDGNANIKAIAYHGELESGHEISSLCGKLIPVLERLELLSENKI 1858

Query: 272  GHNLKVFRRLVISLKELAIQKL 294
            G NLKVF RLV S+KE+AIQKL
Sbjct: 1859 GENLKVFGRLVSSVKEVAIQKL 1880

[Close]

BLAST of HG10006659 vs. TAIR 10
Match: AT5G51200.1 (Protein of unknown function (DUF3414) )

HSP 1 Score: 248.4 bits (633), Expect = 7.0e-66
Identity = 142/261 (54.41%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 32   VWPYEETDEYGFVQSLFQLMHSLFSRELNSLSSGPGAKLLKNRRSSELYSIELNFSLISY 91
            VWP+EE D YGFVQ LF +M  LF        + P   +L   + SEL   +L FSL SY
Sbjct: 1592 VWPFEENDGYGFVQGLFDMMSKLF-------IASPIKSILS--QGSELKLSQLRFSLTSY 1651

Query: 92   LYFLVTRKSLRLQVSGASSGHSSSVTSQRPSLDLLGTLLNSMTTTLERAAEERSLLLNKI 151
            LYFLVT+ SLRLQVS  S    SS   ++P+L LL +LL+ +T +LERAAE++SLLL+KI
Sbjct: 1652 LYFLVTKNSLRLQVSDDSL--DSSTKLRQPTLLLLASLLSHVTDSLERAAEKKSLLLHKI 1711

Query: 152  QEINELSRQDVEEIIVLCIGEDFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE 211
            ++INELSRQDV+ II +C  +++ + SDNI +RRY+AM+EMC++VGN++Q+ITLLL LAE
Sbjct: 1712 RDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVEMCQIVGNRDQLITLLLQLAE 1771

Query: 212  YVLNVMLIHFQDSTVIPDGNASIKAISYHAESDSTQEITSLCGKLIPILERLELLSENKV 271
            +VLN++LIH QD +V     +S +  SY ++S   QE+T LCGKL P ++RL LL+E KV
Sbjct: 1772 HVLNIILIHLQDRSV-----SSNERGSYGSKSHIQQEVTDLCGKLSPTIDRLALLNEGKV 1831

Query: 272  GHNLKVFRRLVISLKELAIQK 293
            GHNLKVF+RL  ++KE+AIQK
Sbjct: 1832 GHNLKVFQRLATTVKEMAIQK 1836

The following BLAST results are available for this feature:

BLAST of HG10006659 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889841.1	1.9e-126	92.80	nuclear pore complex protein NUP205 isoform X2 [Benincasa hispida]	[more]
XP_008457616.1	1.9e-126	93.18	PREDICTED: nuclear pore complex protein NUP205 [Cucumis melo]	[more]
XP_038889840.1	1.9e-126	92.80	nuclear pore complex protein NUP205 isoform X1 [Benincasa hispida]	[more]
XP_011648678.1	1.8e-124	92.42	nuclear pore complex protein NUP205 [Cucumis sativus] >KGN60698.2 hypothetical p...	[more]
XP_022143113.1	4.2e-121	89.77	nuclear pore complex protein NUP205 [Momordica charantia]	[more]

BLAST of HG10006659 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KBW6	9.8e-65	54.41	Nuclear pore complex protein NUP205 OS=Arabidopsis thaliana OX=3702 GN=NUP205 PE...	[more]

BLAST of HG10006659 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C611	9.4e-127	93.18	nuclear pore complex protein NUP205 OS=Cucumis melo OX=3656 GN=LOC103497263 PE=3...	[more]
A0A0A0LI17	8.8e-125	92.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006200 PE=3 SV=1	[more]
A0A6J1CPX3	2.0e-121	89.77	nuclear pore complex protein NUP205 OS=Momordica charantia OX=3673 GN=LOC1110130...	[more]
A0A6J1HLX9	3.3e-116	85.50	nuclear pore complex protein NUP205 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FI96	8.2e-115	84.35	nuclear pore complex protein NUP205 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of HG10006659 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51200.1	7.0e-66	54.41	Protein of unknown function (DUF3414)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006659.1	HG10006659.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005643	nuclear pore