HG10006655 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006655
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Chr07: 20755867 .. 20759331 (-)
RNA-Seq Expression	HG10006655
Synteny	HG10006655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGTATTTTCTTCTCCATATCAGCTATTTATGCACTTTTCTCTTTTAAAATGTGTTTATAGCCCTTTCTTTTCGCATTTTGTAGGGGTTCTTGTTGGCAATTCAGTGCCTCAGAAGGCTTTTAGGATAAATGAGGTGTTTCAAAGAACAAACCCCAGTAGGCTTTTGTCTTTTGAGGTCAAGGTATGGTTTCTCTTGGCATTTCTTTCCTATTTTTCTTCTTTCAAATGCAATGAACTTGTTTGTTTATGGCTGTTTTGTGGATAAATCGTTGGAACTTCACTGGATTGTGGAACTGGAAATTATGGAAATGTCTTTAATTCTCTATTGCTTGTCTTTGGCTAAGGGTTTAATTAGGAACATCTTAACGTATGAGTAGAAATGTATGTTTTAATAACCATTAGCTAGGTAGATGAATATTAATTGAGTTGAAATACAGGGGTGTAAGATGAAACTGACCAAATCAAGTTGGTTTGATTTCTTAAGAAAATTGGTTTCGATGTCGATTTTAGCTTAAAACAAATCCAATTCGACCTGATTACACTATTTTTTCTTATATAAGAAATCAAGCTTTCATGGAGCAAAATGAAAGAATATACGAAGTCATACAAAAAGAAACAAGCCCACAAAAATAGGAGATCCAAAGATTAGACTCCAATCCAACAAAATCAAATTAAGGTCATAATTACAAGAAGAGCTTGTAACCTGATCACCCATAAAGCATGGACACTCCATTATAGTCAAAATGTCCGTGTCGGACACGTGTTGGATACGGACACGTTCGAACACGCTCAGAACATGTGTCCAACATGTAAATTTACATGTCCTATTTTTTTTTTTTTTTTTAATTTCAGACACGTGGAGACACATTTGAGACACTTTCCGGACACGTCTGGAATATTTTTTAAGAGAGAGAAGGGTCCAACCTTTCACGTTGGACCCAAATTTAAAGCCCGAATCAATTATAAGTTAAACTAGGATTAAAAAAACAAAAGGAAAGTCCTTTTTTTTAACCAAAGATAAGGAAAAAAAAACATAAACATAAAAAACTGAAGTTAGAAACCCAAACGTTTTATCTCCTATAATTGTTAATTAACTTGACATTTTATGCTTTTTTTTTAAGTGGAGTGCATTTAATATCTTGTGTTAAATTTATATATCCTTTGAAAATAATAATTAAAAAAGTGTATCCCCAACGTGTCCGTGTCCTAGTTTTCTTTAAATTGGCGTATCGTCGTGTCGTGTCGTGTCCGTATTTGTATCTCGTGTCCGTGCTTCTTAACTGATCACTATTGAACTACATGAAGAAGAACACAGTTTACTCTTTTTTTTCAGTTTCTCAGAATGTGTTTAATTCTTGCTTTGGCAGGCTTCAGATGGTGCAGATAGTAAGCAAACCACAAAATACAAAAGCATAGTTTGCACTGACTGCGATGGAAATGGTATGTATCATCTTGATAGAAAATAGAGACCTCCATCTTTTTTCCTTCAGTTAATATGTGTTTCAGTTATGATATCTTAGAAAGAGCGAGGTAACTGAATGCAAGCTCTATCTTATCCAAAAAAGAAAAAAGGGTGGTAACAAATGAACCGTAAGTTTGACTATGTTCTCTTGATTATTATGCAAAGGCTGGTTGAACTTGATTTTATACAGCTGCAGGCTTATATTAGATCAAACTTAGAAGAAAGCAAATATGGTTGGAAATAGATAAATAGAAGATCAGTTGAAATAGTGATAACCTTTGATCTCAATTCGTTCAACATTTTTCAGAAAATATACATTGTATGTTTTTGAATTGAAGGAATAAGAGCCAACAACTTTAAAAAAAATGAAAATAAATAAAAGCCAACAAGAACATAGTCCAACTGGCATGAAGTTGTACTATTGGCCTCGAGGTCTAAAGTTTGATTCCCTCACCACCCCACACATTGTATAAAAAAATAAAAAGGAATAAGAATAACAATGTAAAGATTTTGCAAGCTATATGTTAGGAGACAATAGTATATCTATTTAATTTTAATTACCCCATTCAGACATATTATCCAAATCCCATTTCAAATTTTAGTTCTAAGTATCGGATAAGAAACAAATAGAACTCAACTTAAAAGAAAAGATAAACCAACCTAAAATAAACTTCTAAGTAATAAGAACGATAATAAAATCAAGATAAAAGAGGAGAAATTAATAGCGAGTTTATCAGTTCACCCGATGTAGCTACATCTAGCACATCTAGCTCTTTACTACTGATGCAAGTTTCACTTAAATGTCAAGGAGAAAAAGTACAAGAGTTTACAACATTTCAATAATGATTTATCTTCCCATGAATCACTCTACAAAAGCTCACAAAACTCTTTAGTGGAGGTTGAAAATATTGCTCCACACCCAAATAAAAATGCCTCTGTTCTCTCTCGTTTTCTTTTCAGTCTGAAAACTACATACAGCCCCGCTTGAACAAAGTTAAGAGATTAAACAAGCATTGAGACAGAGTTTACATATAATTTTTTCTTCTCAATTTTTAGGTGCTGTCCTATGTTCTCAGTGTGAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGGTATTGATGAACAAACTCTCCTTGATCTTAATGTTATTTTGTCTACCTTACTTATTACTTGGCTTCATTCTAGAGGTTTGAATTATAAAGACATGCAAACCAAAATGGAAGTTTAGAATTGCTAGAGACAAACACTGAGATAACTTGCAAGTACTGGGGTGGACAATAGTGAGTGATCAAGCTTGTACCTAATTCTTACAAATACAAGTTGCACAATTTGTAAGTTTCATTGTAAGGGGATGTTTGGCGCACAAACTAGGCATTTGTAATCCGAAGCTAGAAAAGTTGAGTTTACGGTATGTGGGCTTAAAGTCGCACTCCAATGGTCCTAATGAGTCATCTACTTAACAAGTTCTCTCCCTGTAGTGTGTCCCTTATCCTTGGATATGAGTTTATAAATTCCACGATTTTCATTTACTAAAAGTTCAATAACATATAGGTGTGAGAACCTCTAACCCCTTGGCCATGATATATGCCTAAACCAATTGAGCTATACTCGAGTTGACATACACGATTGCATCTATTATCTTATCAATGTATTTAGAGTTCTCATTGTATTTGTTATAATTATTTCAATCACAACTATTGTTCCTTTCGAGATATCTGATAGATTTTTCTGAAAGAATCAACGATACATAATAGATTATCATCTTATTAATGATTAAATTTGAGGTTCTGAACTAGTTAATGTCTTTAACATTGCAGAGGCAAAAGGGATATCCTCTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAG

mRNA sequence

ATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCAGTGCCTCAGAAGGCTTTTAGGATAAATGAGGTGTTTCAAAGAACAAACCCCAGTAGGCTTTTGTCTTTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAAGCAAACCACAAAATACAAAAGCATAGTTTGCACTGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTGAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATATCCTCTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAG

Coding sequence (CDS)

ATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCAGTGCCTCAGAAGGCTTTTAGGATAAATGAGGTGTTTCAAAGAACAAACCCCAGTAGGCTTTTGTCTTTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAAGCAAACCACAAAATACAAAAGCATAGTTTGCACTGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTGAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATATCCTCTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAG

Protein sequence

MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

Homology

[Close]

BLAST of HG10006655 vs. NCBI nr
Match: XP_004139310.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 hypothetical protein Csa_019244 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFRINE FQ+TN  RLLSFEVKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DSKQTTKYKSIVCTDCDGNGAV CSQC+GTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. NCBI nr
Match: XP_008457580.1 (PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa] >TYJ97816.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. NCBI nr
Match: XP_038889638.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 127/137 (92.70%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFS CSSTPICSFNHSSKP  GVL+GNSVPQKAFRIN+ FQRTNP RLLSFEVKASDGA
Sbjct: 1   MAFSTCSSTPICSFNHSSKPNSGVLLGNSVPQKAFRINKAFQRTNPIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DS QTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNGQFKAG LCWLCRGKRDILCG
Sbjct: 61  DSNQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGSLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. NCBI nr
Match: KAG6586393.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.9 bits (655), Expect = 9.8e-65
Identity = 122/138 (88.41%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
           DS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of HG10006655 vs. NCBI nr
Match: XP_022938233.1 (uncharacterized protein LOC111444376 [Cucurbita moschata])

HSP 1 Score: 254.2 bits (648), Expect = 6.3e-64
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
            S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of HG10006655 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-32
Identity = 75/140 (53.57%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 1   MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKA 60
           MA S+C  SS P   F   SK PKP      N       +  E+ Q    SR  SFEVKA
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQ---TSRSQSFEVKA 60

Query: 61  SDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRD 120
           ++  ++ Q TK  S+VC +C+G G V CSQC+G GVN +DHFNGQFKAG LCWLCRGK++
Sbjct: 61  AN--NNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKE 120

Query: 121 ILCGGCNGAGFVGGFMSTAD 137
           +LCG CNGAGF+GGF+ST D
Sbjct: 121 VLCGDCNGAGFIGGFLSTFD 135

[Close]

BLAST of HG10006655 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-29
Identity = 57/88 (64.77%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 50  LSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLC 109
           L  + KA++   S K+  K KSI+C DC+GNGA++C++CEG GVNSVD+F G+FKAG LC
Sbjct: 38  LCIKTKATENDQSAKKHQKVKSILCQDCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGSLC 97

Query: 110 WLCRGKRDILCGGCNGAGFVGGFMSTAD 137
           WLCRGKR+ILCG CNGAGF+GGF+ST D
Sbjct: 98  WLCRGKREILCGNCNGAGFLGGFLSTFD 125

[Close]

BLAST of HG10006655 vs. ExPASy TrEMBL
Match: A0A0A0LFZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFRINE FQ+TN  RLLSFEVKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DSKQTTKYKSIVCTDCDGNGAV CSQC+GTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. ExPASy TrEMBL
Match: A0A5A7V544 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00260 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. ExPASy TrEMBL
Match: A0A1S3C5F0 (uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of HG10006655 vs. ExPASy TrEMBL
Match: A0A6J1FIB2 (uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC111444376 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.1e-64
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
            S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of HG10006655 vs. ExPASy TrEMBL
Match: A0A6J1HSG2 (uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.9e-64
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGA 60
           MA+SICSSTPI SFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA
Sbjct: 1   MAYSICSSTPIFSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
           DS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of HG10006655 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-33
Identity = 75/140 (53.57%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 1   MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKA 60
           MA S+C  SS P   F   SK PKP      N       +  E+ Q    SR  SFEVKA
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQ---TSRSQSFEVKA 60

Query: 61  SDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRD 120
           ++  ++ Q TK  S+VC +C+G G V CSQC+G GVN +DHFNGQFKAG LCWLCRGK++
Sbjct: 61  AN--NNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKE 120

Query: 121 ILCGGCNGAGFVGGFMSTAD 137
           +LCG CNGAGF+GGF+ST D
Sbjct: 121 VLCGDCNGAGFIGGFLSTFD 135

[Close]

BLAST of HG10006655 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 73  CTDCDGNGAVLCSQCEGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG 130
           CT C+  GA+LCS C GTG  V+S+    G       C  C G  +I+C  C G G VG
Sbjct: 96  CTCCEAKGALLCSTCSGTGLYVDSIMESQG-IIVKVRCLGCGGSGNIMCKLCGGRGHVG 153

The following BLAST results are available for this feature:

BLAST of HG10006655 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139310.1	2.7e-70	94.89	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 h...	[more]
XP_008457580.1	1.0e-69	93.43	PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 cha...	[more]
XP_038889638.1	1.1e-68	92.70	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]	[more]
KAG6586393.1	9.8e-65	88.41	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022938233.1	6.3e-64	87.68	uncharacterized protein LOC111444376 [Cucurbita moschata]	[more]

BLAST of HG10006655 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN73	5.1e-32	53.57	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9XF14	3.1e-29	64.77	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=...	[more]

BLAST of HG10006655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFZ2	1.3e-70	94.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1	[more]
A0A5A7V544	4.9e-70	93.43	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C5F0	4.9e-70	93.43	uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=...	[more]
A0A6J1FIB2	3.1e-64	87.68	uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A6J1HSG2	8.9e-64	87.68	uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718...	[more]

BLAST of HG10006655 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47650.1	3.6e-33	53.57	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT5G17840.1	2.1e-04	42.37	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852:SF65	PROTEIN P13.9, PUTATIVE-RELATED	coord: 1..130
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 1..130
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 65..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006655.1	HG10006655.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0101031	chaperone complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0044183	protein folding chaperone