HG10006644 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006644
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	methyl-CpG-binding domain-containing protein 11-like
Location	Chr07: 20655343 .. 20656212 (-)
RNA-Seq Expression	HG10006644
Synteny	HG10006644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATTTGGCAGTTTTTTCCTAAGCAAGGTAACTCCCCTAAGAAACATGAGGTTATCTTCACAACTCCAACAGGGGAGGAGATCAACAACAAAAGAAAGTTGGATCAGTACCTGAAGGCACACCCTGGTGGCCCAGCAGCTGCCGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGTCTCCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGATCTTAAAGAAGCAGAAGCTGAACCAGAAATTCTGGAGGAGAAGAAAGAAGTTGACAATCAAGATGCTGGAAAAGATGAGAGCATACCTGATGCTGAGGTAAAAGATGACAAGAAGGAGAATCAAGATGAGAAGGAAATGAAAGACGAAGCTGCCAAAGCAGAGCCACCAAGGCCTGATGATCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACCAATGAATCAGATCAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAGCCTGAAAGCTCTAAATTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGAAGAAAAGATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTCGTTGAAGCTGTCAAACCTGACACTCTTGTATCTGATAAACAAGAAAAGGTACTAGAGAATCAAAACCCTAATCAACAGGATATTGAACTAGAAGCAGAAATCAAGGACAAAGCAGGTGCAACTGAAGAGAAGAGTGAGAAACATACTGAGACAAACAAGACTATAGAAGTCACTGAGAATGGCAACCACAGGAGTGGTACTGGTGAGGTAAAGCCTTGA

mRNA sequence

ATGAATATTTGGCAGTTTTTTCCTAAGCAAGGTAACTCCCCTAAGAAACATGAGGTTATCTTCACAACTCCAACAGGGGAGGAGATCAACAACAAAAGAAAGTTGGATCAGTACCTGAAGGCACACCCTGGTGGCCCAGCAGCTGCCGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGTCTCCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGATCTTAAAGAAGCAGAAGCTGAACCAGAAATTCTGGAGGAGAAGAAAGAAGTTGACAATCAAGATGCTGGAAAAGATGAGAGCATACCTGATGCTGAGGTAAAAGATGACAAGAAGGAGAATCAAGATGAGAAGGAAATGAAAGACGAAGCTGCCAAAGCAGAGCCACCAAGGCCTGATGATCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACCAATGAATCAGATCAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAGCCTGAAAGCTCTAAATTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGAAGAAAAGATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTCGTTGAAGCTGTCAAACCTGACACTCTTGTATCTGATAAACAAGAAAAGGTACTAGAGAATCAAAACCCTAATCAACAGGATATTGAACTAGAAGCAGAAATCAAGGACAAAGCAGGTGCAACTGAAGAGAAGAGTGAGAAACATACTGAGACAAACAAGACTATAGAAGTCACTGAGAATGGCAACCACAGGAGTGGTACTGGTGAGGTAAAGCCTTGA

Coding sequence (CDS)

ATGAATATTTGGCAGTTTTTTCCTAAGCAAGGTAACTCCCCTAAGAAACATGAGGTTATCTTCACAACTCCAACAGGGGAGGAGATCAACAACAAAAGAAAGTTGGATCAGTACCTGAAGGCACACCCTGGTGGCCCAGCAGCTGCCGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGTCTCCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGATCTTAAAGAAGCAGAAGCTGAACCAGAAATTCTGGAGGAGAAGAAAGAAGTTGACAATCAAGATGCTGGAAAAGATGAGAGCATACCTGATGCTGAGGTAAAAGATGACAAGAAGGAGAATCAAGATGAGAAGGAAATGAAAGACGAAGCTGCCAAAGCAGAGCCACCAAGGCCTGATGATCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACCAATGAATCAGATCAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAGCCTGAAAGCTCTAAATTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGAAGAAAAGATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTCGTTGAAGCTGTCAAACCTGACACTCTTGTATCTGATAAACAAGAAAAGGTACTAGAGAATCAAAACCCTAATCAACAGGATATTGAACTAGAAGCAGAAATCAAGGACAAAGCAGGTGCAACTGAAGAGAAGAGTGAGAAACATACTGAGACAAACAAGACTATAGAAGTCACTGAGAATGGCAACCACAGGAGTGGTACTGGTGAGGTAAAGCCTTGA

Protein sequence

MNIWQFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVKDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

Homology

[Close]

BLAST of HG10006644 vs. NCBI nr
Match: XP_008457463.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0063499.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYJ97825.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 474.6 bits (1220), Expect = 6.3e-130
Identity = 260/286 (90.91%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSP+KHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEV 124
           ISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KD-DKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 184
           KD +KKEN DEKE K+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKE
Sbjct: 148 KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNESNQEKLEGNLNEKE 207

Query: 185 PESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQ 244
           PESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPDTLVSDKQE  LENQNPNQQ
Sbjct: 208 PESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSDKQENALENQNPNQQ 267

Query: 245 DIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           +IELE EIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Sbjct: 268 EIELEGEIKDKAGAAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of HG10006644 vs. NCBI nr
Match: XP_004139304.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8651531.1 hypothetical protein Csa_019489 [Cucumis sativus])

HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128
Identity = 257/286 (89.86%), Postives = 270/286 (94.41%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSP+KHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEV 124
           ISEKAKVSPPMESEHPKRKRTSVSKKDLKE EAEPE++EEKKEVDN DAGKDES+ DAEV
Sbjct: 88  ISEKAKVSPPMESEHPKRKRTSVSKKDLKETEAEPEVMEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KD-DKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 184
           KD DKKENQDEKE K+EAA+AEPP+PDDQLNA N+AEKQEHKITNES+QEK E NLNEKE
Sbjct: 148 KDADKKENQDEKETKNEAAEAEPPKPDDQLNAGNEAEKQEHKITNESNQEKSEGNLNEKE 207

Query: 185 PESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQ 244
           PESSKLNLNEN+EGAKHEE IE+PQV EKNDGNF EAVKPDTLVSDKQE  LENQNPNQQ
Sbjct: 208 PESSKLNLNENVEGAKHEEMIEKPQV-EKNDGNFAEAVKPDTLVSDKQENALENQNPNQQ 267

Query: 245 DIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           DIELE EIKDKAG  EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Sbjct: 268 DIELEEEIKDKAGEAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of HG10006644 vs. NCBI nr
Match: XP_038889539.1 (methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida])

HSP 1 Score: 465.7 bits (1197), Expect = 2.9e-127
Identity = 259/285 (90.88%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSPKKHEVIFTTPTGEEI NKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKHEVIFTTPTGEEIKNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEV 124
           ISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKE DNQDAGKD S  D EV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEFDNQDAGKDGSRDDTEV 147

Query: 125 KDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEP 184
           KD KKENQDEKE KDEAA+AEPP+P DQLNADNDAEK E+KITNESDQEKLE NLNEKEP
Sbjct: 148 KDGKKENQDEKETKDEAAEAEPPKPVDQLNADNDAEK-EYKITNESDQEKLETNLNEKEP 207

Query: 185 ESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQD 244
           ESSKLNLNENLEGAKHEEKIEQPQVEE NDGNF EAVKPDTLVSDKQEK LENQNPNQQD
Sbjct: 208 ESSKLNLNENLEGAKHEEKIEQPQVEE-NDGNFGEAVKPDTLVSDKQEKALENQNPNQQD 267

Query: 245 IELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           IELE EIKDKAGATEEKSEKHTETNKTIEVTENGNHR+G  EV P
Sbjct: 268 IELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRNGGNEVNP 310

[Close]

BLAST of HG10006644 vs. NCBI nr
Match: XP_023545855.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-116
Identity = 244/319 (76.49%), Postives = 263/319 (82.45%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSPKK+EVIF TPTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAE 124
           ISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+LEEKKEVDNQDAGKDESI DAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVLEEKKEVDNQDAGKDESIADAE 147

Query: 125 VKD---------------------------------DKKENQDEKEMKDEAAKAEPPRPD 184
           VKD                                 DKKENQDEKE KDEAA+AEPP+PD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 DQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE 244
           DQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNLNENLEGAKH+E+IEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEQIEQPQVE 267

Query: 245 EKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEAEIKDKAGATEEKSEKHTETNK 290
           EKND N  E VKPDTL+SD+QEK  ENQ P +QDIELE EIKDKA ATEEK+EKHTETNK
Sbjct: 268 EKNDSNLGETVKPDTLLSDRQEKEQENQKPYEQDIELEGEIKDKAAATEEKNEKHTETNK 327

[Close]

BLAST of HG10006644 vs. NCBI nr
Match: XP_022946072.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 424.9 bits (1091), Expect = 5.7e-115
Identity = 242/319 (75.86%), Postives = 261/319 (81.82%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSPKK+EVIF TPTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAE 124
           ISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+ EEKKEVDNQDAGKDE+I DAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVREEKKEVDNQDAGKDETIADAE 147

Query: 125 VKD---------------------------------DKKENQDEKEMKDEAAKAEPPRPD 184
           VKD                                 DKKENQDEKE KDEAA+AEPP+PD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 DQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE 244
           DQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNLNENLEGAKH+EKIEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQVE 267

Query: 245 EKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEAEIKDKAGATEEKSEKHTETNK 290
           EKND    E VKPDTL+SD+QEK  ENQ P +QDIELE EIKDKA ATEEK+EKHTETNK
Sbjct: 268 EKNDSTLGETVKPDTLLSDRQEKEQENQKPCEQDIELEGEIKDKAAATEEKNEKHTETNK 327

[Close]

BLAST of HG10006644 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.5e-22
Identity = 101/278 (36.33%), Postives = 147/278 (52.88%), Query Frame = 0


Query: 6   FFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+PK+  +P+K E++F  PTGEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RI
Sbjct: 22  FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRI 81

Query: 66  SEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE 125
           S+K K + P   + P  K++R+S++KKD KEA    E  EE    +N D  KD    +AE
Sbjct: 82  SQKVKATTPTPDKEPLLKKRRSSLTKKDNKEA---AEKNEEAAVKENMDVDKDGKTENAE 141

Query: 126 VKDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 185
            + +K     EKE   E A+AE    + +        K+  K T    + + E    EKE
Sbjct: 142 AEKEK-----EKEGVTEIAEAEKENNEGEKTEAEKVNKEGEK-TEAGKEGQTEIAEAEKE 201

Query: 186 PESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVEAVKPDTLVSDKQEKVLENQN 245
            E  K    EN E     +K E  +V+    EK  G+   A +P      K E + + + 
Sbjct: 202 KEGEKAEA-ENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEP-----SKVEGLKDTEM 261

Query: 246 PNQQDIELEAEIKDKAG--ATEEKSEKHTETNKTIEVT 276
              Q++  EA+++ K     TE K    TE N    VT
Sbjct: 262 KEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVT 284

[Close]

BLAST of HG10006644 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.2e-18
Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 6   FFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+P +  S KK EV+F  PTGEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARI
Sbjct: 22  FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARI 81

Query: 66  SEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK 125
           SEK K +P  + E PK   R ++ VSKKD               +K+ E  P   I E +
Sbjct: 82  SEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENE 141

Query: 126 KEVDNQDAGKDESIPDAEVKDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHK 185
              D   +G+ E + DA+     +E  +   +++E    +    +  L++ +D  K+  K
Sbjct: 142 NVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK----EKALDSVDDKSKETDK 201

Query: 186 ITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEK 213
             +    EK   ++ +K  E+S    N   E   HEE     + E K
Sbjct: 202 EKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGK 244

[Close]

BLAST of HG10006644 vs. ExPASy TrEMBL
Match: A0A0A0LG01 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006830 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132
Identity = 262/290 (90.34%), Postives = 274/290 (94.48%), Query Frame = 0


Query: 1   MNIWQFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR 60
           MNIWQFFPKQGNSP+KHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR
Sbjct: 1   MNIWQFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR 60

Query: 61  RSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIP 120
           RSARISEKAKVSPPMESEHPKRKRTSVSKKDLKE EAEPE++EEKKEVDN DAGKDES+ 
Sbjct: 61  RSARISEKAKVSPPMESEHPKRKRTSVSKKDLKETEAEPEVMEEKKEVDNPDAGKDESMA 120

Query: 121 DAEVKD-DKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNL 180
           DAEVKD DKKENQDEKE K+EAA+AEPP+PDDQLNA N+AEKQEHKITNES+QEK E NL
Sbjct: 121 DAEVKDADKKENQDEKETKNEAAEAEPPKPDDQLNAGNEAEKQEHKITNESNQEKSEGNL 180

Query: 181 NEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQN 240
           NEKEPESSKLNLNEN+EGAKHEE IE+PQV EKNDGNF EAVKPDTLVSDKQE  LENQN
Sbjct: 181 NEKEPESSKLNLNENVEGAKHEEMIEKPQV-EKNDGNFAEAVKPDTLVSDKQENALENQN 240

Query: 241 PNQQDIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           PNQQDIELE EIKDKAG  EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Sbjct: 241 PNQQDIELEEEIKDKAGEAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 289

[Close]

BLAST of HG10006644 vs. ExPASy TrEMBL
Match: A0A5D3BH67 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00350 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.0e-130
Identity = 260/286 (90.91%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSP+KHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEV 124
           ISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KD-DKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 184
           KD +KKEN DEKE K+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKE
Sbjct: 148 KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNESNQEKLEGNLNEKE 207

Query: 185 PESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQ 244
           PESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPDTLVSDKQE  LENQNPNQQ
Sbjct: 208 PESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSDKQENALENQNPNQQ 267

Query: 245 DIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           +IELE EIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Sbjct: 268 EIELEGEIKDKAGAAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of HG10006644 vs. ExPASy TrEMBL
Match: A0A1S3C687 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103497143 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.0e-130
Identity = 260/286 (90.91%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSP+KHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEV 124
           ISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KD-DKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 184
           KD +KKEN DEKE K+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKE
Sbjct: 148 KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNESNQEKLEGNLNEKE 207

Query: 185 PESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQ 244
           PESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPDTLVSDKQE  LENQNPNQQ
Sbjct: 208 PESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSDKQENALENQNPNQQ 267

Query: 245 DIELEAEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP 290
           +IELE EIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Sbjct: 268 EIELEGEIKDKAGAAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of HG10006644 vs. ExPASy TrEMBL
Match: A0A6J1G2N9 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111450270 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.8e-115
Identity = 242/319 (75.86%), Postives = 261/319 (81.82%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSPKK+EVIF TPTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAE 124
           ISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+ EEKKEVDNQDAGKDE+I DAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVREEKKEVDNQDAGKDETIADAE 147

Query: 125 VKD---------------------------------DKKENQDEKEMKDEAAKAEPPRPD 184
           VKD                                 DKKENQDEKE KDEAA+AEPP+PD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 DQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE 244
           DQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNLNENLEGAKH+EKIEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQVE 267

Query: 245 EKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEAEIKDKAGATEEKSEKHTETNK 290
           EKND    E VKPDTL+SD+QEK  ENQ P +QDIELE EIKDKA ATEEK+EKHTETNK
Sbjct: 268 EKNDSTLGETVKPDTLLSDRQEKEQENQKPCEQDIELEGEIKDKAAATEEKNEKHTETNK 327

[Close]

BLAST of HG10006644 vs. ExPASy TrEMBL
Match: A0A6J1KA38 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111493630 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.1e-114
Identity = 241/319 (75.55%), Postives = 260/319 (81.50%), Query Frame = 0


Query: 5   QFFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGNSPKK+EVIF TPTGEE +NKRKLDQYLK+HPG PA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGCPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAE 124
           ISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+LEEKKEVDNQDAGK ESI DAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVLEEKKEVDNQDAGKHESIADAE 147

Query: 125 VKD---------------------------------DKKENQDEKEMKDEAAKAEPPRPD 184
           VKD                                 DKKENQD+KE KDEAA+AEPP+PD
Sbjct: 148 VKDDDKNKTEDEAAEADPPKPDDQLNADNDADIKDADKKENQDKKETKDEAAEAEPPKPD 207

Query: 185 DQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE 244
           DQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNLNENLEGAKH+EKIEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQVE 267

Query: 245 EKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEAEIKDKAGATEEKSEKHTETNK 290
           EKND N  E VKPDTL+SD+QEK  ENQ P +QDIELE EI DKA ATEEK+EKHTETNK
Sbjct: 268 EKNDSNLGETVKPDTLLSDRQEKEQENQKPYEQDIELEGEINDKAAATEEKNEKHTETNK 327

[Close]

BLAST of HG10006644 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23
Identity = 101/278 (36.33%), Postives = 147/278 (52.88%), Query Frame = 0


Query: 6   FFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+PK+  +P+K E++F  PTGEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RI
Sbjct: 22  FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRI 81

Query: 66  SEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE 125
           S+K K + P   + P  K++R+S++KKD KEA    E  EE    +N D  KD    +AE
Sbjct: 82  SQKVKATTPTPDKEPLLKKRRSSLTKKDNKEA---AEKNEEAAVKENMDVDKDGKTENAE 141

Query: 126 VKDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKE 185
            + +K     EKE   E A+AE    + +        K+  K T    + + E    EKE
Sbjct: 142 AEKEK-----EKEGVTEIAEAEKENNEGEKTEAEKVNKEGEK-TEAGKEGQTEIAEAEKE 201

Query: 186 PESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVEAVKPDTLVSDKQEKVLENQN 245
            E  K    EN E     +K E  +V+    EK  G+   A +P      K E + + + 
Sbjct: 202 KEGEKAEA-ENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEP-----SKVEGLKDTEM 261

Query: 246 PNQQDIELEAEIKDKAG--ATEEKSEKHTETNKTIEVT 276
              Q++  EA+++ K     TE K    TE N    VT
Sbjct: 262 KEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVT 284

[Close]

BLAST of HG10006644 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-19
Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 6   FFPKQGNSPKKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+P +  S KK EV+F  PTGEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARI
Sbjct: 22  FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARI 81

Query: 66  SEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK 125
           SEK K +P  + E PK   R ++ VSKKD               +K+ E  P   I E +
Sbjct: 82  SEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENE 141

Query: 126 KEVDNQDAGKDESIPDAEVKDDKKENQDEKEMKDEAAKAEPPRPDDQLNADNDAEKQEHK 185
              D   +G+ E + DA+     +E  +   +++E    +    +  L++ +D  K+  K
Sbjct: 142 NVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK----EKALDSVDDKSKETDK 201

Query: 186 ITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEK 213
             +    EK   ++ +K  E+S    N   E   HEE     + E K
Sbjct: 202 EKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGK 244

The following BLAST results are available for this feature:

BLAST of HG10006644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457463.1	6.3e-130	90.91	PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >...	[more]
XP_004139304.1	2.0e-128	89.86	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8651531.1 ...	[more]
XP_038889539.1	2.9e-127	90.88	methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida]	[more]
XP_023545855.1	2.3e-116	76.49	methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo...	[more]
XP_022946072.1	5.7e-115	75.86	methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]	[more]

BLAST of HG10006644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI36	3.5e-22	36.33	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LW00	5.2e-18	35.68	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of HG10006644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG01	2.5e-132	90.34	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006830 PE=4 SV...	[more]
A0A5D3BH67	3.0e-130	90.91	Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3C687	3.0e-130	90.91	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1G2N9	2.8e-115	75.86	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KA38	3.1e-114	75.55	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of HG10006644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15340.1	2.5e-23	36.33	methyl-CPG-binding domain 10	[more]
AT3G15790.1	3.7e-19	35.68	methyl-CPG-binding domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.890.10		coord: 6..91 e-value: 4.0E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..271
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 5..282
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 5..282
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 1..58 score: 9.313004
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006644.1	HG10006644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding