HG10006599 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006599
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	acidic mammalian chitinase-like
Location	Chr07: 20235405 .. 20235944 (-)
RNA-Seq Expression	HG10006599
Synteny	HG10006599

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGACAACCATGATCCTATACTTCCTTCGCCAATATCGATGCTATGCTTTTCACTCATTCTTTGTTGGTTACGCTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTACTTCAACTGTCACATTAAGTAATCCCGACGTCAAAACTTTGTTGTCCCTTCAAGGATCCAATGAAGTTTTTGCTCAAATGCCAAGGAGCCAACAAAATCGTGATGTGTTCATCAATCCTCCATTGAAGCAGAGAGCAGGTTCCTTTGATGGCCTTGATCTTCAATGGCTATACCTCTTCACTGAAGAAGAAATGAGAACTTTGAAACTCTTCTGTTTTATGGCGCAAAGCTGTTGTGGAAGATGCCAAAAATTTGAGTGTTCCAGAGCTACTCCTTGTTGCTTCAGTGTCCAACCTACCATATCTCATCCACAATATTCATATCCAATTCAAACAATCAACAAAAGTTAA

mRNA sequence

ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGACAACCATGATCCTATACTTCCTTCGCCAATATCGATGCTATGCTTTTCACTCATTCTTTGTTGGTTACGCTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTACTTCAACTGTCACATTAAGTAATCCCGACGTCAAAACTTTGTTGTCCCTTCAAGGATCCAATGAAGTTTTTGCTCAAATGCCAAGGAGCCAACAAAATCGTGATGTGTTCATCAATCCTCCATTGAAGCAGAGAGCAGGTTCCTTTGATGGCCTTGATCTTCAATGGCTATACCTCTTCACTGAAGAAGAAATGAGAACTTTGAAACTCTTCTGTTTTATGGCGCAAAGCTGTTGTGGAAGATGCCAAAAATTTGAGTGTTCCAGAGCTACTCCTTGTTGCTTCAGTGTCCAACCTACCATATCTCATCCACAATATTCATATCCAATTCAAACAATCAACAAAAGTTAA

Coding sequence (CDS)

ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGACAACCATGATCCTATACTTCCTTCGCCAATATCGATGCTATGCTTTTCACTCATTCTTTGTTGGTTACGCTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTACTTCAACTGTCACATTAAGTAATCCCGACGTCAAAACTTTGTTGTCCCTTCAAGGATCCAATGAAGTTTTTGCTCAAATGCCAAGGAGCCAACAAAATCGTGATGTGTTCATCAATCCTCCATTGAAGCAGAGAGCAGGTTCCTTTGATGGCCTTGATCTTCAATGGCTATACCTCTTCACTGAAGAAGAAATGAGAACTTTGAAACTCTTCTGTTTTATGGCGCAAAGCTGTTGTGGAAGATGCCAAAAATTTGAGTGTTCCAGAGCTACTCCTTGTTGCTTCAGTGTCCAACCTACCATATCTCATCCACAATATTCATATCCAATTCAAACAATCAACAAAAGTTAA

Protein sequence

MADTAPITDVVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPLKQRAGSFDGLDLQWLYLFTEEEMRTLKLFCFMAQSCCGRCQKFECSRATPCCFSVQPTISHPQYSYPIQTINKS

Homology

[Close]

BLAST of HG10006599 vs. NCBI nr
Match: XP_022999577.1 (chitotriosidase-1-like [Cucurbita maxima])

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-24
Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNPDVKTLLS+ G   VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPDVKTLLSIAGDAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMANFK 134

[Close]

BLAST of HG10006599 vs. NCBI nr
Match: XP_022999580.1 (chitotriosidase-1-like [Cucurbita maxima])

HSP 1 Score: 119.0 bits (297), Expect = 4.2e-23
Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNP VKTLLS+ G   VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPGVKTLLSIAGDAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMANFK 134

[Close]

BLAST of HG10006599 vs. NCBI nr
Match: XP_022946077.1 (acidic mammalian chitinase-like [Cucurbita moschata] >XP_022946671.1 acidic mammalian chitinase-like [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-22
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSGTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNP+VKTLLS+     VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPEVKTLLSIAADAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMDNFK 134

[Close]

BLAST of HG10006599 vs. NCBI nr
Match: XP_023521369.1 (acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-22
Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 5   APITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQF 64
           A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VTID SQL+L+NQF
Sbjct: 11  ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSQLILLNQF 70

Query: 65  TSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQWLYL 124
           + TV LSNPDVKTLLS+     VFA M     NRD FI   +   R G FDGLDLQWLY 
Sbjct: 71  SPTVRLSNPDVKTLLSIAADAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 130

Query: 125 FTEEEMRTLK 133
            ++EEM   K
Sbjct: 131 SSQEEMGNFK 140

[Close]

BLAST of HG10006599 vs. NCBI nr
Match: KAG6599362.1 (Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599364.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-22
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VTID SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNP+VKTLLS+     +FA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPEVKTLLSIAADAALFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMDNFK 134

[Close]

BLAST of HG10006599 vs. ExPASy Swiss-Prot
Match: O81862 (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 10  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVT 69
           VVKA YW    + P+  + I    F+ + C    ++S T +VT+ S+     + FT TV 
Sbjct: 27  VVKASYWFPASEFPV--TDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQ 86

Query: 70  LSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLFT 129
             NP VKTLLS+ G       +A M  +  +R  FI+  ++  R+  F GLDL W Y  +
Sbjct: 87  RRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSS 146

[Close]

BLAST of HG10006599 vs. ExPASy Swiss-Prot
Match: A0A072VEP0 (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 52/178 (29.21%), Postives = 86/178 (48.31%), Query Frame = 0


Query: 11  VKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLS 70
           V++ YW    D   PS I    F+ IL      +  ++K+ I  S +     F   +   
Sbjct: 40  VRSAYW-PAGDDFSPSLIDTNYFTHILLAFIQPEPISFKLEITKSGIKWGQNFIKALRHR 99

Query: 71  NPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLFTEE 130
           +P VKTLLS+ G   ++ +F+++  ++QNR++FIN  ++  R   FDG+DL W +  T++
Sbjct: 100 SPPVKTLLSIGGGGSNSTLFSEIASTKQNREIFINSTIEVARKYRFDGVDLDWEFPETQQ 159

Query: 131 EMRTLKLF------CFMAQSCCGRCQKFECSRATPCCFSVQPTISHPQYSYPIQTINK 179
           +M  L L          A++   R  +   + A     +V+    H   SYP Q INK
Sbjct: 160 DMFNLGLLYEEWYNALFAEAKVRRKPRLLLTSAVYYNSTVRLIGKHGPRSYPTQAINK 216

[Close]

BLAST of HG10006599 vs. ExPASy Swiss-Prot
Match: A0A072UR65 (Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 40/126 (31.75%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 11  VKAGYWLDNHDPIL-PSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTL 70
           VK  YWL+N  P   P+ +    F+ I     + ++ TYK+ I SSQ++ +N FT T   
Sbjct: 35  VKGIYWLEN--PFFPPTTVDTSLFTHIFYSFLTPNNITYKLEISSSQILSLNTFTKTFKT 94

Query: 71  SNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLFTE 130
            +P   TL S+ G   ++ + A +         FIN  +   R   FDG+DL W +    
Sbjct: 95  KSPPAATLFSIGGAGSNSSLLAFIASDPPACAAFINSTIDVARTFGFDGIDLDWEFPKNT 154

Query: 131 EEMRTL 132
           +EM  L
Sbjct: 155 KEMNDL 158

[Close]

BLAST of HG10006599 vs. ExPASy TrEMBL
Match: A0A6J1KB82 (chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493904 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.8e-24
Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNPDVKTLLS+ G   VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPDVKTLLSIAGDAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMANFK 134

[Close]

BLAST of HG10006599 vs. ExPASy TrEMBL
Match: A0A6J1KFT3 (chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493907 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNP VKTLLS+ G   VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPGVKTLLSIAGDAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMANFK 134

[Close]

BLAST of HG10006599 vs. ExPASy TrEMBL
Match: A0A6J1G2P4 (acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+L
Sbjct: 1   MAEFANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSGTYQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           I+QF+STV LSNP+VKTLLS+     VFA M     NRD FI   +   R G FDGLDLQ
Sbjct: 61  IDQFSSTVKLSNPEVKTLLSIAADAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++++M   K
Sbjct: 121 WLYPSSQDQMDNFK 134

[Close]

BLAST of HG10006599 vs. ExPASy TrEMBL
Match: A0A6J1G4H5 (chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-22
Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWL-DNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA  A +T  V AGYWL   +D +L + I    F+ +      +D  T++VT+D SQL+L
Sbjct: 1   MAKFANVTKFVNAGYWLASTNDRLLAANIDATLFTHLFVGYALLDPKTHQVTVDPSQLIL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQ 120
           INQF+STV LSNPDVKTLLS+     VFA M  S  NRD FI   +   R G FDGLDLQ
Sbjct: 61  INQFSSTVKLSNPDVKTLLSIAADAAVFAAMAASPTNRDDFIKSSIAAARGGGFDGLDLQ 120

Query: 121 WLYLFTEEEMRTLK 133
           WLY  ++ EM   K
Sbjct: 121 WLYPSSQYEMGNFK 134

[Close]

BLAST of HG10006599 vs. ExPASy TrEMBL
Match: A0A6J1DYG4 (chitinase-3-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111025768 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22
Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 1   MADTAPITDVVKAGYWLDN-HDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVL 60
           MA  +  T  V  GYWL + +  + PS I    F+ + C    +D  +Y+VT+ +SQ  L
Sbjct: 1   MAPPSKPTSCVNGGYWLSSTNQQLPPSNIDAKLFTHLFCGFAEIDRNSYEVTVPASQATL 60

Query: 61  INQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPLKQRA-GSFDGLDLQ 120
           INQF+STV +SNPDVKTLLS++G  +VFA+M      RD FI   ++  A G F+GLDLQ
Sbjct: 61  INQFSSTVRMSNPDVKTLLSIRGDRDVFAKMASEPTYRDGFIQSSIEVAAKGKFNGLDLQ 120

Query: 121 WLYLFTEEEMRTLKL 134
           WLY  +EEEM+  ++
Sbjct: 121 WLYPSSEEEMQNFEI 135

[Close]

BLAST of HG10006599 vs. TAIR 10
Match: AT4G19730.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 11  VKAGYWL---DNHDPILPS-PISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTST 70
           VKA YW    +  DPI  +  I    F+ + C    +D+ ++KV +  +   + + FT T
Sbjct: 14  VKASYWFPDGETQDPITSAETIPSALFTHLFCAFADLDANSHKVFVSQAHEFIFSTFTET 73

Query: 71  VTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPL-KQRAGSFDGLDLQWLYL 129
           V + NP VKTLLS+ G   +N  FA M  + Q+R  FI+  +   R+  F GLDL W Y 
Sbjct: 74  VKIRNPQVKTLLSIGGKNANNSAFASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYP 133

[Close]

BLAST of HG10006599 vs. TAIR 10
Match: AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 71.2 bits (173), Expect = 9.2e-13
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 8   TDVVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTV 67
           +DVVKA YW    D    + I    F+ + C    +++ +Y++TI +      + FT TV
Sbjct: 4   SDVVKASYWFPATD-FPATDIDSSLFTHLFCTFADLEAESYEITIATWNQAPFHAFTETV 63

Query: 68  TLSNPDVKTLLSLQGSN---EVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLF 127
              NP VKTLLS+ G N   + FA M  +  +R  FI   +   R+  F GLDL W Y  
Sbjct: 64  QQRNPHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPR 123

Query: 128 TEEEM 129
            EEEM
Sbjct: 124 NEEEM 127

[Close]

BLAST of HG10006599 vs. TAIR 10
Match: AT4G19820.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 10  VVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTL 69
           VVKA YW    +  L + I    F+ + C    +++ TY+V + S      + FT TV  
Sbjct: 25  VVKATYWFAESESPL-AQIDSSLFTHLFCAFADINTLTYQVIVSSRNKPKFSTFTQTVRR 84

Query: 70  SNPDVKTLLSLQGS---NEVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLFTE 129
            NP VKTLLS+ G    N  FA M  +  +R +FI+  +K  R+  F GLDL W Y    
Sbjct: 85  RNPTVKTLLSIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYPSIT 144

[Close]

BLAST of HG10006599 vs. TAIR 10
Match: AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 10  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVT 69
           VVKA YW    + P+  + I    F+ + C    ++S T +VT+ S+     + FT TV 
Sbjct: 27  VVKASYWFPASEFPV--TDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQ 86

Query: 70  LSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-QRAGSFDGLDLQWLYLFT 129
             NP VKTLLS+ G       +A M  +  +R  FI+  ++  R+  F GLDL W Y  +
Sbjct: 87  RRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSS 146

The following BLAST results are available for this feature:

BLAST of HG10006599 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999577.1	3.8e-24	49.25	chitotriosidase-1-like [Cucurbita maxima]	[more]
XP_022999580.1	4.2e-23	48.51	chitotriosidase-1-like [Cucurbita maxima]	[more]
XP_022946077.1	1.2e-22	47.76	acidic mammalian chitinase-like [Cucurbita moschata] >XP_022946671.1 acidic mamm...	[more]
XP_023521369.1	1.2e-22	50.00	acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599362.1	1.6e-22	47.76	Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599364.1...	[more]

BLAST of HG10006599 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81862	3.5e-09	34.68	Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1	[more]
A0A072VEP0	3.5e-09	29.21	Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1	[more]
A0A072UR65	5.7e-07	31.75	Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1	[more]

BLAST of HG10006599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB82	1.8e-24	49.25	chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493904 PE=4 SV=1	[more]
A0A6J1KFT3	2.0e-23	48.51	chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493907 PE=4 SV=1	[more]
A0A6J1G2P4	5.8e-23	47.76	acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE...	[more]
A0A6J1G4H5	2.2e-22	49.25	chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 ...	[more]
A0A6J1DYG4	2.9e-22	45.19	chitinase-3-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111025768 PE=4 S...	[more]

BLAST of HG10006599 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19730.1	6.4e-14	35.71	Glycosyl hydrolase superfamily protein	[more]
AT4G19800.1	9.2e-13	36.80	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19820.1	1.0e-11	36.59	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19810.1	2.5e-10	34.68	Glycosyl hydrolase family protein with chitinase insertion domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 8..141 e-value: 1.2E-12 score: 49.6
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 7..131
None	No IPR available	PANTHER	PTHR11177:SF351	CHITINASE-LIKE PROTEIN-RELATED	coord: 7..131
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 43..143 e-value: 2.8E-8 score: 33.9
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 14..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006599.1	HG10006599.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process