
HG10006584 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTCGAACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTTCTCTGTGTTTATCCTGTTGCCTCCGTAAGCACCGGAATGGCCATCACCATCACCATCATCATCATCACCACCACCACCGGCGGATGTCAACTTCCTCCGACGGCGATACGCCTGGACCGCTCATGAGGTGTTCCTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATCTCGCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTCAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTATCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCCTCGCCGTCTTCGTCTAATGCGTCGAGAGAGATGATCACGGCGTTTAGTTAA ATGGACGATTCGAACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTTCTCTGTGTTTATCCTGTTGCCTCCGTAAGCACCGGAATGGCCATCACCATCACCATCATCATCATCACCACCACCACCGGCGGATGTCAACTTCCTCCGACGGCGATACGCCTGGACCGCTCATGAGGTGTTCCTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATCTCGCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTCAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTATCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCCTCGCCGTCTTCGTCTAATGCGTCGAGAGAGATGATCACGGCGTTTAGTTAA ATGGACGATTCGAACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTTCTCTGTGTTTATCCTGTTGCCTCCGTAAGCACCGGAATGGCCATCACCATCACCATCATCATCATCACCACCACCACCGGCGGATGTCAACTTCCTCCGACGGCGATACGCCTGGACCGCTCATGAGGTGTTCCTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATCTCGCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTCAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTATCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCCTCGCCGTCTTCGTCTAATGCGTCGAGAGAGATGATCACGGCGTTTAGTTAA MDDSNKGNASPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHHHRRMSTSSDGDTPGPLMRCSSAKDKSRSRESPEIKDRRPHFISRLGRHGRRHSASADFRYDALSYALNFDEGYDEGHVDDEYPLRNFSSRLPASPPKSSPSSSNASREMITAFS Homology
BLAST of HG10006584 vs. NCBI nr
Match: XP_038890730.1 (homeobox protein MOX-2 [Benincasa hispida]) HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75 Identity = 152/161 (94.41%), Postives = 156/161 (96.89%), Query Frame = 0
BLAST of HG10006584 vs. NCBI nr
Match: XP_008460859.1 (PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo]) HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69 Identity = 144/165 (87.27%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of HG10006584 vs. NCBI nr
Match: KAA0063552.1 (uncharacterized protein E6C27_scaffold329G00590 [Cucumis melo var. makuwa] >TYJ97879.1 uncharacterized protein E5676_scaffold285G00930 [Cucumis melo var. makuwa]) HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69 Identity = 143/165 (86.67%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of HG10006584 vs. NCBI nr
Match: XP_011650096.1 (NEDD8-specific protease 1 [Cucumis sativus]) HSP 1 Score: 268.1 bits (684), Expect = 4.9e-68 Identity = 142/163 (87.12%), Postives = 151/163 (92.64%), Query Frame = 0
BLAST of HG10006584 vs. NCBI nr
Match: XP_023536962.1 (uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.2 bits (596), Expect = 7.9e-58 Identity = 131/163 (80.37%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of HG10006584 vs. ExPASy TrEMBL
Match: A0A1S3CDF1 (uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 7.4e-70 Identity = 144/165 (87.27%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of HG10006584 vs. ExPASy TrEMBL
Match: A0A5D3BFQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00930 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69 Identity = 143/165 (86.67%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of HG10006584 vs. ExPASy TrEMBL
Match: A0A0A0LL60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68 Identity = 142/163 (87.12%), Postives = 151/163 (92.64%), Query Frame = 0
BLAST of HG10006584 vs. ExPASy TrEMBL
Match: A0A6J1FDP2 (uncharacterized protein LOC111444439 OS=Cucurbita moschata OX=3662 GN=LOC111444439 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 8.5e-58 Identity = 130/163 (79.75%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of HG10006584 vs. ExPASy TrEMBL
Match: A0A6J1HQB7 (uncharacterized protein LOC111465710 OS=Cucurbita maxima OX=3661 GN=LOC111465710 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.5e-57 Identity = 130/163 (79.75%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of HG10006584 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 8.5e-10 Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 0
BLAST of HG10006584 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 8.8e-07 Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of HG10006584 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein ) HSP 1 Score: 48.5 bits (114), Expect = 5.7e-06 Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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