HG10006560 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006560
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Beta_elim_lyase domain-containing protein
Location	Chr07: 19848623 .. 19849069 (+)
RNA-Seq Expression	HG10006560
Synteny	HG10006560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACGAGGAGTGTCGATCTTCGTTCAGACACTGTCACCAAACCAACCGAGGCGATGAGGGCTGCAATGGCGAGCGCCGAGGTTGATGATGATGTATTGAAATATGACCCAACTGCCCTCCGATTGGAGACAGAAATGGCGAAGATCATGGGGAAGGAGGCGGCTCTTTTTGTGCCTTCCGGCACTATGGGGAACCTCATAAGTGTTCTTGTCCATTGCGAAATTAGGGGCTCTGAGGTCATTCTTGGGGATAATTCTCATATCCATATTTATGAAAATGGAGGTATTGCAACTATTGGAGGGGTTCATCCTAGGACTGTTAGGAATAACGGAGATGGAACTATGGACTTGGATTTGATTGAAGCTGCCATTAGAGACCCAAGAGGAGAGATTGTGTTTCCAACTACGAGGCTTATCTGCTTGGAAAACTCACATGCTAAGTAA

mRNA sequence

ATGGTGACGAGGAGTGTCGATCTTCGTTCAGACACTGTCACCAAACCAACCGAGGCGATGAGGGCTGCAATGGCGAGCGCCGAGGTTGATGATGATGTATTGAAATATGACCCAACTGCCCTCCGATTGGAGACAGAAATGGCGAAGATCATGGGGAAGGAGGCGGCTCTTTTTGTGCCTTCCGGCACTATGGGGAACCTCATAAGTGTTCTTGTCCATTGCGAAATTAGGGGCTCTGAGGTCATTCTTGGGGATAATTCTCATATCCATATTTATGAAAATGGAGGTATTGCAACTATTGGAGGGGTTCATCCTAGGACTGTTAGGAATAACGGAGATGGAACTATGGACTTGGATTTGATTGAAGCTGCCATTAGAGACCCAAGAGGAGAGATTGTGTTTCCAACTACGAGGCTTATCTGCTTGGAAAACTCACATGCTAAGTAA

Coding sequence (CDS)

ATGGTGACGAGGAGTGTCGATCTTCGTTCAGACACTGTCACCAAACCAACCGAGGCGATGAGGGCTGCAATGGCGAGCGCCGAGGTTGATGATGATGTATTGAAATATGACCCAACTGCCCTCCGATTGGAGACAGAAATGGCGAAGATCATGGGGAAGGAGGCGGCTCTTTTTGTGCCTTCCGGCACTATGGGGAACCTCATAAGTGTTCTTGTCCATTGCGAAATTAGGGGCTCTGAGGTCATTCTTGGGGATAATTCTCATATCCATATTTATGAAAATGGAGGTATTGCAACTATTGGAGGGGTTCATCCTAGGACTGTTAGGAATAACGGAGATGGAACTATGGACTTGGATTTGATTGAAGCTGCCATTAGAGACCCAAGAGGAGAGATTGTGTTTCCAACTACGAGGCTTATCTGCTTGGAAAACTCACATGCTAAGTAA

Protein sequence

MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVPSGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDLIEAAIRDPRGEIVFPTTRLICLENSHAK

Homology

[Close]

BLAST of HG10006560 vs. NCBI nr
Match: TYJ97895.1 (putative low-specificity L-threonine aldolase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MVTR+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGEIVFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. NCBI nr
Match: XP_008456444.1 (PREDICTED: probable low-specificity L-threonine aldolase 1 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MVTR+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGEIVFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. NCBI nr
Match: XP_038891136.1 (probable low-specificity L-threonine aldolase 1 [Benincasa hispida])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 144/147 (97.96%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MVT++VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVTKTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. NCBI nr
Match: XP_004139254.1 (probable low-specificity L-threonine aldolase 1 [Cucumis sativus] >KGN60769.1 hypothetical protein Csa_019254 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 4.3e-74
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV R+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVKRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. NCBI nr
Match: XP_022938289.1 (probable low-specificity L-threonine aldolase 1 [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 142/147 (96.60%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV+R+VDLRSDTVTKPTEAMRAAMASAEVDDDVLK DPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVSRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKNDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTM+LDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMNLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. ExPASy Swiss-Prot
Match: Q8RXU4 (Probable low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=THA1 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.4e-64
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

[Close]

BLAST of HG10006560 vs. ExPASy Swiss-Prot
Match: Q9FPH3 (Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=THA2 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-58
Identity = 108/144 (75.00%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 4   RSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVPSGT 63
           R+VDLRSDTVTKPTE+MR+AMA+AEVDDDVL  DPTALRLE E+A+I GKEAA+FVPSGT
Sbjct: 8   RTVDLRSDTVTKPTESMRSAMANAEVDDDVLGNDPTALRLEKEVAEIAGKEAAMFVPSGT 67

Query: 64  MGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDLIEA 123
           MGNLISVLVHC+ RGSEVILGD+SHIHIYENGG++++GGVHPRTV+N  DGTM++  IEA
Sbjct: 68  MGNLISVLVHCDERGSEVILGDDSHIHIYENGGVSSLGGVHPRTVKNEEDGTMEIGAIEA 127

Query: 124 AIRDPRGEIVFPTTRLICLENSHA 148
           A+R P+G++  P T+LICLEN+ A
Sbjct: 128 AVRSPKGDLHHPVTKLICLENTQA 151

[Close]

BLAST of HG10006560 vs. ExPASy Swiss-Prot
Match: Q21890 (Uncharacterized protein R102.4 OS=Caenorhabditis elegans OX=6239 GN=R102.4 PE=3 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-31
Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 5   SVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVPSGTM 64
           S+DLRSDTVT P+  MR AMA A V DDV   D T  RLE   A++ GKEA LFV SGTM
Sbjct: 66  SIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTM 125

Query: 65  GNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDLIEAA 124
           GNL++++ HC+ RG E+I+G  +HIH +E G  A   G+   T+    DGTMDL+ IE A
Sbjct: 126 GNLLAIMAHCQ-RGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQA 185

Query: 125 IRDPRGEIVFPTTRLICLENSH 147
           IR    +   P ++LIC+EN+H
Sbjct: 186 IRVK--DCHMPASKLICIENTH 204

[Close]

BLAST of HG10006560 vs. ExPASy Swiss-Prot
Match: O07051 (L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 4   RSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVPSGT 63
           R +DLRSDTVT+PT+AMR  M  AEV DDV   DP    LE   A ++GKEAALFVPSGT
Sbjct: 2   RYIDLRSDTVTQPTDAMRQCMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPSGT 61

Query: 64  MGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDLIEA 123
           M NL++V+ HC+ RG   +LG  +HI+ YE  G A +G V  + V    DG++ L  + A
Sbjct: 62  MSNLLAVMSHCQ-RGEGAVLGSAAHIYRYEAQGSAVLGSVALQPVPMQADGSLALADVRA 121

Query: 124 AIRDPRGEIVFPTTRLICLENSH 147
           AI     ++ F  TRL+CLEN+H
Sbjct: 122 AIAP--DDVHFTPTRLVCLENTH 141

[Close]

BLAST of HG10006560 vs. ExPASy Swiss-Prot
Match: P58319 (Low specificity L-threonine aldolase OS=Escherichia coli O157:H7 OX=83334 GN=ltaE PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-28
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 6   VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVPSGTMG 65
           +DLRSDTVT+P+ AM  AM +A V DDV   DPT   L+   A++ GKEAA+F+P+GT  
Sbjct: 2   IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQA 61

Query: 66  NLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDLIEAAI 125
           NL+++L HCE RG E I+G  +H +++E GG A +G + P+ +    DGT+ LD +   I
Sbjct: 62  NLVALLSHCE-RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI 121

Query: 126 RDPRGEIVFPTTRLICLENSH 147
           +    +I F  T+L+ LEN+H
Sbjct: 122 KP--DDIHFARTKLLSLENTH 139

[Close]

BLAST of HG10006560 vs. ExPASy TrEMBL
Match: A0A5D3BHD8 (Putative low-specificity L-threonine aldolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001110 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MVTR+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGEIVFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. ExPASy TrEMBL
Match: A0A1S3C391 (probable low-specificity L-threonine aldolase 1 OS=Cucumis melo OX=3656 GN=LOC103496384 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MVTR+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGEIVFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. ExPASy TrEMBL
Match: A0A0A0LI99 (Beta_elim_lyase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009560 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV R+VDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVKRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. ExPASy TrEMBL
Match: A0A6J1FDM7 (probable low-specificity L-threonine aldolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111444422 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.1e-73
Identity = 142/147 (96.60%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV+R+VDLRSDTVTKPTEAMRAAMASAEVDDDVLK DPTALRLETEMAKIMGKEAALFVP
Sbjct: 1   MVSRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLKNDPTALRLETEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTM+LDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMNLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. ExPASy TrEMBL
Match: A0A6J1HRZ4 (probable low-specificity L-threonine aldolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111465586 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72
Identity = 140/147 (95.24%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV+R+VDLRSDTVTKPTEAMRAAMA AEVDDDVLK DPTALRLE+EMAKIMGKEAALFVP
Sbjct: 1   MVSRTVDLRSDTVTKPTEAMRAAMARAEVDDDVLKSDPTALRLESEMAKIMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTM+LDL
Sbjct: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMNLDL 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDPRGE+VFPTTRLICLENSHA
Sbjct: 121 IEAAIRDPRGELVFPTTRLICLENSHA 147

[Close]

BLAST of HG10006560 vs. TAIR 10
Match: AT1G08630.1 (threonine aldolase 1 )

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

[Close]

BLAST of HG10006560 vs. TAIR 10
Match: AT1G08630.3 (threonine aldolase 1 )

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

[Close]

BLAST of HG10006560 vs. TAIR 10
Match: AT1G08630.2 (threonine aldolase 1 )

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

[Close]

BLAST of HG10006560 vs. TAIR 10
Match: AT1G08630.4 (threonine aldolase 1 )

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

[Close]

BLAST of HG10006560 vs. TAIR 10
Match: AT1G08630.5 (threonine aldolase 1 )

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65
Identity = 118/147 (80.27%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MVTRSVDLRSDTVTKPTEAMRAAMASAEVDDDVLKYDPTALRLETEMAKIMGKEAALFVP 60
           MV RSVDLRSDTVT+PT+AMR AM +AEVDDDVL YDPTA RLE EMAK+MGKEAALFVP
Sbjct: 1   MVMRSVDLRSDTVTRPTDAMREAMCNAEVDDDVLGYDPTARRLEEEMAKMMGKEAALFVP 60

Query: 61  SGTMGNLISVLVHCEIRGSEVILGDNSHIHIYENGGIATIGGVHPRTVRNNGDGTMDLDL 120
           SGTMGNLISV+VHC++RGSEVILGDN HIH+YENGGI+TIGGVHP+TV+N  DGTMDL+ 
Sbjct: 61  SGTMGNLISVMVHCDVRGSEVILGDNCHIHVYENGGISTIGGVHPKTVKNEEDGTMDLEA 120

Query: 121 IEAAIRDPRGEIVFPTTRLICLENSHA 148
           IEAAIRDP+G   +P+TRLICLEN+HA
Sbjct: 121 IEAAIRDPKGSTFYPSTRLICLENTHA 147

The following BLAST results are available for this feature:

BLAST of HG10006560 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97895.1	5.0e-75	99.32	putative low-specificity L-threonine aldolase 1 [Cucumis melo var. makuwa]	[more]
XP_008456444.1	5.0e-75	99.32	PREDICTED: probable low-specificity L-threonine aldolase 1 [Cucumis melo]	[more]
XP_038891136.1	1.9e-74	97.96	probable low-specificity L-threonine aldolase 1 [Benincasa hispida]	[more]
XP_004139254.1	4.3e-74	97.96	probable low-specificity L-threonine aldolase 1 [Cucumis sativus] >KGN60769.1 hy...	[more]
XP_022938289.1	1.1e-72	96.60	probable low-specificity L-threonine aldolase 1 [Cucurbita moschata]	[more]

BLAST of HG10006560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXU4	1.4e-64	80.27	Probable low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FPH3	2.0e-58	75.00	Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q21890	2.7e-31	51.41	Uncharacterized protein R102.4 OS=Caenorhabditis elegans OX=6239 GN=R102.4 PE=3 ...	[more]
O07051	1.5e-29	50.35	L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1	[more]
P58319	4.8e-28	45.39	Low specificity L-threonine aldolase OS=Escherichia coli O157:H7 OX=83334 GN=lta...	[more]

BLAST of HG10006560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHD8	2.4e-75	99.32	Putative low-specificity L-threonine aldolase 1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C391	2.4e-75	99.32	probable low-specificity L-threonine aldolase 1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LI99	2.1e-74	97.96	Beta_elim_lyase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]
A0A6J1FDM7	5.1e-73	96.60	probable low-specificity L-threonine aldolase 1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HRZ4	5.6e-72	95.24	probable low-specificity L-threonine aldolase 1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10006560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08630.1	1.0e-65	80.27	threonine aldolase 1	[more]
AT1G08630.3	1.0e-65	80.27	threonine aldolase 1	[more]
AT1G08630.2	1.0e-65	80.27	threonine aldolase 1	[more]
AT1G08630.4	1.0e-65	80.27	threonine aldolase 1	[more]
AT1G08630.5	1.0e-65	80.27	threonine aldolase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001597	Aromatic amino acid beta-eliminating lyase/threonine aldolase	PFAM	PF01212	Beta_elim_lyase	coord: 7..147 e-value: 1.7E-43 score: 149.0
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 2..148 e-value: 4.1E-46 score: 159.3
None	No IPR available	PANTHER	PTHR48097	L-THREONINE ALDOLASE-RELATED	coord: 1..147
None	No IPR available	PANTHER	PTHR48097:SF4	L-ALLO-THREONINE ALDOLASE-LIKE PROTEIN	coord: 1..147
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 6..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006560.1	HG10006560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006545	glycine biosynthetic process
biological_process	GO:0006567	threonine catabolic process
biological_process	GO:0006520	cellular amino acid metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008732	L-allo-threonine aldolase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016829	lyase activity