HG10006548 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006548
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	VQ domain-containing protein
Location	Chr07: 19741515 .. 19741913 (+)
RNA-Seq Expression	HG10006548
Synteny	HG10006548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATTTTACAAGCCTTCCTAATAATCTTCATCACCAAAAAATTACCAAAATTCCCAGAAAAGCAACAATAATAGATCAAAACAAACCCATTAAAGTGAAGTACATTTCAAGTCCTATGATGGTGAAAGCCAACAACGAGTCTGAATTTCGAGCCATTGTTCAAAAGCTCACCGGCCAGCACTCGCCTGATGATCCTTTTGATCAATCAGTTGAAGAGTCTAACCATGTTTATTATCCGTCGTCGCCGTCGTCCATCCCCGCAGCTTCTTTCGATGCTTCGGCGTCCAGCCATGTCTTTGATCCGACCGGAGTCGTCGAAGGCCGTTACTGGCGAGGTCAAATGGAAGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATTTGGTGA

mRNA sequence

ATGGAGAATTTTACAAGCCTTCCTAATAATCTTCATCACCAAAAAATTACCAAAATTCCCAGAAAAGCAACAATAATAGATCAAAACAAACCCATTAAAGTGAAGTACATTTCAAGTCCTATGATGGTGAAAGCCAACAACGAGTCTGAATTTCGAGCCATTGTTCAAAAGCTCACCGGCCAGCACTCGCCTGATGATCCTTTTGATCAATCAGTTGAAGAGTCTAACCATGTTTATTATCCGTCGTCGCCGTCGTCCATCCCCGCAGCTTCTTTCGATGCTTCGGCGTCCAGCCATGTCTTTGATCCGACCGGAGTCGTCGAAGGCCGTTACTGGCGAGGTCAAATGGAAGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATTTGGTGA

Coding sequence (CDS)

ATGGAGAATTTTACAAGCCTTCCTAATAATCTTCATCACCAAAAAATTACCAAAATTCCCAGAAAAGCAACAATAATAGATCAAAACAAACCCATTAAAGTGAAGTACATTTCAAGTCCTATGATGGTGAAAGCCAACAACGAGTCTGAATTTCGAGCCATTGTTCAAAAGCTCACCGGCCAGCACTCGCCTGATGATCCTTTTGATCAATCAGTTGAAGAGTCTAACCATGTTTATTATCCGTCGTCGCCGTCGTCCATCCCCGCAGCTTCTTTCGATGCTTCGGCGTCCAGCCATGTCTTTGATCCGACCGGAGTCGTCGAAGGCCGTTACTGGCGAGGTCAAATGGAAGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATTTGGTGA

Protein sequence

MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDASASSHVFDPTGVVEGRYWRGQMEGSFSGFQASSCVNIW

Homology

[Close]

BLAST of HG10006548 vs. NCBI nr
Match: KAE8651551.1 (hypothetical protein Csa_019210 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 7.3e-41
Identity = 99/141 (70.21%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MENFT+LP+N HH+K++++  KATI  QNKPIKVKYISSPMMVKANNESEFRAIVQKLTG
Sbjct: 1   MENFTTLPSNFHHKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60

Query: 61  QHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDA------SASSHV-FDP-TGVVEGRYW 120
           QHSPD   DQSV++ NHV+YP  PSS P  SFD       SAS  V FD      EGRYW
Sbjct: 61  QHSPDHD-DQSVQDFNHVFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGDEGRYW 120

Query: 121 RGQME-GSFSGFQASSCVNIW 133
           RG+ME GSFSGFQASSCVNIW
Sbjct: 121 RGEMELGSFSGFQASSCVNIW 140

[Close]

BLAST of HG10006548 vs. NCBI nr
Match: KAA0063579.1 (VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 95/145 (65.52%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 1   MEN-FTSLPNNLHHQKITKIPRKATIID-QNKPIKVKYISSPMMVKANNESEFRAIVQKL 60
           MEN  T+LP + HH+K+++   K T ID QNKPIKVKYISSPMMVKANNESEFRAIVQKL
Sbjct: 1   MENLITTLPTDFHHRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60

Query: 61  TGQHSPDDP--FDQSVEESNHVYYPSSP-SSIPAASFD-----ASASSHVFDPTGVV--- 120
           TGQHSPD    FDQSV++ NH +YP  P SS P  SFD      SAS  V     +    
Sbjct: 61  TGQHSPDHDANFDQSVQDFNHAFYPPPPSSSTPGVSFDPRDCYGSASGDVLFDDRIEDGD 120

Query: 121 EGRYWRGQMEGSFSGFQASSCVNIW 133
           EGRYWRG+MEGSFSGFQASSCVNIW
Sbjct: 121 EGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of HG10006548 vs. NCBI nr
Match: XP_038877668.1 (sigma factor binding protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 141.0 bits (354), Expect = 7.5e-30
Identity = 80/113 (70.80%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 26  IDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPFDQSVEESNHVYYPSSPS 85
           +DQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSP D FDQS E+ N V+YP  PS
Sbjct: 1   MDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPHDAFDQSAEDFNQVFYP-PPS 60

Query: 86  SIPAASFD-----ASASSHV-FDPTGVVEGRYWRGQMEGSFSGFQASSCVNIW 133
           S+ A SFD     ASAS  V FD         W+G+MEGSFSGFQASSCVN W
Sbjct: 61  SMAAPSFDPKDCYASASGDVLFD---------WQGEMEGSFSGFQASSCVNTW 103

[Close]

BLAST of HG10006548 vs. NCBI nr
Match: XP_022938305.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 77/137 (56.20%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 1   MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  SLPN+L H+K+     +AT+   NKPIKVKYISSPMMVKANNE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTG 60

Query: 61  QHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDAS-----ASSHVFDPTGVVEGRYWRGQ 120
           QHS DD FD+S +E NH + P  PSS    SFD+       SS  +DP GV       G+
Sbjct: 61  QHSADDAFDRSPQEFNHAFCP--PSS-TVTSFDSKDCYDLVSSDAYDPIGV-------GE 120

Query: 121 MEGSFSGFQASSCVNIW 133
           M+ S  GFQA S V++W
Sbjct: 121 MKDSLYGFQA-SYVDVW 124

[Close]

BLAST of HG10006548 vs. NCBI nr
Match: KAG6586326.1 (Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-23
Identity = 75/137 (54.74%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 1   MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  SLPN+L H+K+     +AT+   NKPIKVKYISSPMMVKA+NE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKASNEFEFRAIVQKLTG 60

Query: 61  QHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDAS-----ASSHVFDPTGVVEGRYWRGQ 120
           QHS DD FD+S +E NH + P  PSS    SFD+       SS  +DP  V       G+
Sbjct: 61  QHSADDAFDRSPQEFNHAFCP--PSS-TVTSFDSKDCYDLVSSDAYDPIRV-------GE 120

Query: 121 MEGSFSGFQASSCVNIW 133
           M+ S  GFQA S V++W
Sbjct: 121 MKDSLYGFQA-SYVDVW 124

[Close]

BLAST of HG10006548 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 14  QKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPD---DPFDQ 73
           +K  K  +K T    NKPIKV+YIS+PM V+    S+FR +VQ+LTGQ + D   +P   
Sbjct: 24  RKSPKQKKKTT--STNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQDAVDLQPEPI-Y 83

Query: 74  SVEESNHVYYPSSPSSIPAASFD---ASASSHVFDPTGVVEGRYWRGQMEGSFSGFQASS 132
           S    +H   P + +  P            S  ++P    E  +   QM   FSGF ++ 
Sbjct: 84  SPSSDDHNLSPPAENLAPRVLHQEPFGERDSDCYEPLN-AEDMFLPDQMSAGFSGFFSNG 142

[Close]

BLAST of HG10006548 vs. ExPASy Swiss-Prot
Match: O80669 (Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB2 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 17  TKIP--RKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPFDQSVEE 76
           T+IP  +K      +KPIKV+YIS+PM V+    S+FR +VQ+LTGQ + D P   +   
Sbjct: 20  TRIPPKQKRKSTTTHKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDAADLPPSPTTFT 79

Query: 77  SNHVYYPSSPSSIPAASFDASASSHVFDPTGVVEGRYWRGQMEGSFSGFQASSCVNI 132
           +  ++ P   S +     D       + P  + E  +   QM    SGF +S   N+
Sbjct: 80  AVDLHRPCE-SEMNLEPLDGEVRGEYYSP--LDEEVFNAPQMSAGLSGFFSSGFYNV 132

[Close]

BLAST of HG10006548 vs. ExPASy TrEMBL
Match: A0A0A0LFF9 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.5e-41
Identity = 99/141 (70.21%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MENFT+LP+N HH+K++++  KATI  QNKPIKVKYISSPMMVKANNESEFRAIVQKLTG
Sbjct: 1   MENFTTLPSNFHHKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60

Query: 61  QHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDA------SASSHV-FDP-TGVVEGRYW 120
           QHSPD   DQSV++ NHV+YP  PSS P  SFD       SAS  V FD      EGRYW
Sbjct: 61  QHSPDHD-DQSVQDFNHVFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGDEGRYW 120

Query: 121 RGQME-GSFSGFQASSCVNIW 133
           RG+ME GSFSGFQASSCVNIW
Sbjct: 121 RGEMELGSFSGFQASSCVNIW 140

[Close]

BLAST of HG10006548 vs. ExPASy TrEMBL
Match: A0A5A7VDH6 (VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001220 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 95/145 (65.52%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 1   MEN-FTSLPNNLHHQKITKIPRKATIID-QNKPIKVKYISSPMMVKANNESEFRAIVQKL 60
           MEN  T+LP + HH+K+++   K T ID QNKPIKVKYISSPMMVKANNESEFRAIVQKL
Sbjct: 1   MENLITTLPTDFHHRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60

Query: 61  TGQHSPDDP--FDQSVEESNHVYYPSSP-SSIPAASFD-----ASASSHVFDPTGVV--- 120
           TGQHSPD    FDQSV++ NH +YP  P SS P  SFD      SAS  V     +    
Sbjct: 61  TGQHSPDHDANFDQSVQDFNHAFYPPPPSSSTPGVSFDPRDCYGSASGDVLFDDRIEDGD 120

Query: 121 EGRYWRGQMEGSFSGFQASSCVNIW 133
           EGRYWRG+MEGSFSGFQASSCVNIW
Sbjct: 121 EGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of HG10006548 vs. ExPASy TrEMBL
Match: A0A6J1FJE0 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444440 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 77/137 (56.20%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 1   MENFTSLPNNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  SLPN+L H+K+     +AT+   NKPIKVKYISSPMMVKANNE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTG 60

Query: 61  QHSPDDPFDQSVEESNHVYYPSSPSSIPAASFDAS-----ASSHVFDPTGVVEGRYWRGQ 120
           QHS DD FD+S +E NH + P  PSS    SFD+       SS  +DP GV       G+
Sbjct: 61  QHSADDAFDRSPQEFNHAFCP--PSS-TVTSFDSKDCYDLVSSDAYDPIGV-------GE 120

Query: 121 MEGSFSGFQASSCVNIW 133
           M+ S  GFQA S V++W
Sbjct: 121 MKDSLYGFQA-SYVDVW 124

[Close]

BLAST of HG10006548 vs. ExPASy TrEMBL
Match: A0A6J1CME4 (sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012954 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-15
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 30  KPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPFDQSV----EESNHVYYPSSPS 89
           KPIKVKYIS+PMMVKAN+ESEFR IVQ+LTGQ+SPDD F+       EE NH +YP  PS
Sbjct: 3   KPIKVKYISNPMMVKANSESEFREIVQRLTGQNSPDDAFESPAFGGEEELNHAFYPPPPS 62

Query: 90  SIPAASFDASA-SSHVFDPTGVV-EGRYWRGQMEGSFSGFQASSCVNIW 133
           +  A S D       V    G + EG + + +M+G FSGFQA SCVN +
Sbjct: 63  T--AVSTDPKGYYGLVSGKVGELGEGCFRQDEMQG-FSGFQA-SCVNTY 107

[Close]

BLAST of HG10006548 vs. ExPASy TrEMBL
Match: A0A1Q3BFQ5 (VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10278 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 6.0e-09
Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 9   NNLHHQKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPF 68
           N  HH   +   +K T + +N PIKV +ISSPM+VKA+N SEFRAIVQ+LTGQ+S  + F
Sbjct: 7   NQYHHDHKS---QKLTKVKKNDPIKVTHISSPMLVKASNPSEFRAIVQELTGQYSNINDF 66

Query: 69  ------DQSVEESNHVYYPSSPSSIPAASFDASASSHVFDPTGVVEGRYWRGQMEGSFSG 127
                   + EE+N V Y  +P      + ++   S    P    +G  W G    SF G
Sbjct: 67  GDLYATSNTYEEANQVSYHKAPPQANIDTENSDTISSSISPLEFNQGFVW-GDDSESFFG 126

[Close]

BLAST of HG10006548 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 14  QKITKIPRKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPD---DPFDQ 73
           +K  K  +K T    NKPIKV+YIS+PM V+    S+FR +VQ+LTGQ + D   +P   
Sbjct: 24  RKSPKQKKKTT--STNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQDAVDLQPEPI-Y 83

Query: 74  SVEESNHVYYPSSPSSIPAASFD---ASASSHVFDPTGVVEGRYWRGQMEGSFSGFQASS 132
           S    +H   P + +  P            S  ++P    E  +   QM   FSGF ++ 
Sbjct: 84  SPSSDDHNLSPPAENLAPRVLHQEPFGERDSDCYEPLN-AEDMFLPDQMSAGFSGFFSNG 142

[Close]

BLAST of HG10006548 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-05
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 17  TKIP--RKATIIDQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPDDPFDQSVEE 76
           T+IP  +K      +KPIKV+YIS+PM V+    S+FR +VQ+LTGQ + D P   +   
Sbjct: 20  TRIPPKQKRKSTTTHKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDAADLPPSPTTFT 79

Query: 77  SNHVYYPSSPSSIPAASFDASASSHVFDPTGVVEGRYWRGQMEGSFSGFQASSCVNI 132
           +  ++ P   S +     D       + P  + E  +   QM    SGF +S   N+
Sbjct: 80  AVDLHRPCE-SEMNLEPLDGEVRGEYYSP--LDEEVFNAPQMSAGLSGFFSSGFYNV 132

The following BLAST results are available for this feature:

BLAST of HG10006548 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651551.1	7.3e-41	70.21	hypothetical protein Csa_019210 [Cucumis sativus]	[more]
KAA0063579.1	2.9e-37	65.52	VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-cont...	[more]
XP_038877668.1	7.5e-30	70.80	sigma factor binding protein 1, chloroplastic-like [Benincasa hispida]	[more]
XP_022938305.1	2.1e-24	56.20	sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6586326.1	6.8e-23	54.74	Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of HG10006548 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDH1	2.5e-04	33.06	Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80669	4.3e-04	32.48	Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of HG10006548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFF9	3.5e-41	70.21	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=...	[more]
A0A5A7VDH6	1.4e-37	65.52	VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FJE0	1.0e-24	56.20	sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1CME4	4.3e-15	55.05	sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=367...	[more]
A0A1Q3BFQ5	6.0e-09	39.52	VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10278...	[more]

BLAST of HG10006548 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56710.1	1.8e-05	33.06	sigma factor binding protein 1	[more]
AT2G41180.1	3.1e-05	32.48	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 37..65 e-value: 4.0E-9 score: 35.8
None	No IPR available	PANTHER	PTHR33624:SF17	VQ MOTIF PROTEIN	coord: 12..121
IPR039335	Sigma factor binding protein 1/2	PANTHER	PTHR33624	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 12..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006548.1	HG10006548.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051091	positive regulation of DNA-binding transcription factor activity