HG10006537 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006537
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	histone H1-like
Location	Chr07: 19623207 .. 19624089 (+)
RNA-Seq Expression	HG10006537
Synteny	HG10006537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCGCCGCTGATCCCGTTGTCTCCTCCGATGCTCCCTCCGCCGTAGCATCGGTGGCTCAGCCAGCGGAGAACGATTCGAAGGCTAAGAAAGTCGCGGCCTCCAAAGCTTCCAAGGCCAAGAAACCGTCTGTTGCTAAGAGGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGGTATGATAATCTGTTTTCTGATTTGATCGATAATGATTATTCACTCCATTTTTACGTTTTGTTCTGATCGAATTTTGAAATTGTTCTTTAGATGATTAGCGAAGCGATCGTTTCGCTCAAAGAGAGGACCGGTTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCATAAGCAATTGCCTACCAATTTCAGGAAGCTTTTGCTCGTTCATCTGAAGAAGCTAGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGATCTATTCAAGCAAAAACTGCAGCAGCGCCTGCTGCCGCCAAGAAGCCAGTGAGTTCAAAGCTCAAGGCGGCTGCAAGCATCAAGAAAGCCGCCGTTGCAAAACCGAAAGCGAAAACTGCTGTGAAACCTAAGCCGAAAGCCGTAGTGAAGCCGAAGACAGTCGCGAAATCCAAGGTTGTTGCGAAGCCGAAGGCCGCCGCTGCCGCCAAGCCTAAGGCAGCAGAGAAGGTCAAGAAGGTCGCTCCAAAGCCTAAACCTGCAGCGAAGGCTGCTAAAGTTGCGAAAACACTGTCGCGAACGTCGCCAGGAAAGAGAGCTGCACCGGCGGCAAAGACAAAGAAGGTAGCTGCGAAGAAGCCAAAGACTGTGAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATAG

mRNA sequence

ATGTCTTCCGCCGCTGATCCCGTTGTCTCCTCCGATGCTCCCTCCGCCGTAGCATCGGTGGCTCAGCCAGCGGAGAACGATTCGAAGGCTAAGAAAGTCGCGGCCTCCAAAGCTTCCAAGGCCAAGAAACCGTCTGTTGCTAAGAGGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAAGCGATCGTTTCGCTCAAAGAGAGGACCGGTTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCATAAGCAATTGCCTACCAATTTCAGGAAGCTTTTGCTCGTTCATCTGAAGAAGCTAGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGATCTATTCAAGCAAAAACTGCAGCAGCGCCTGCTGCCGCCAAGAAGCCAGTGAGTTCAAAGCTCAAGGCGGCTGCAAGCATCAAGAAAGCCGCCGTTGCAAAACCGAAAGCGAAAACTGCTGTGAAACCTAAGCCGAAAGCCGTAGTGAAGCCGAAGACAGTCGCGAAATCCAAGGTTGTTGCGAAGCCGAAGGCCGCCGCTGCCGCCAAGCCTAAGGCAGCAGAGAAGGTCAAGAAGGTCGCTCCAAAGCCTAAACCTGCAGCGAAGGCTGCTAAAGTTGCGAAAACACTGTCGCGAACGTCGCCAGGAAAGAGAGCTGCACCGGCGGCAAAGACAAAGAAGGTAGCTGCGAAGAAGCCAAAGACTGTGAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATAG

Coding sequence (CDS)

ATGTCTTCCGCCGCTGATCCCGTTGTCTCCTCCGATGCTCCCTCCGCCGTAGCATCGGTGGCTCAGCCAGCGGAGAACGATTCGAAGGCTAAGAAAGTCGCGGCCTCCAAAGCTTCCAAGGCCAAGAAACCGTCTGTTGCTAAGAGGACCAAATCTTCGCCGACTCATCCTCCTTTCTTTCAGATGATTAGCGAAGCGATCGTTTCGCTCAAAGAGAGGACCGGTTCGAGTCAGTACGCCATTACGAAGTTCAACGAAGAGAAGCATAAGCAATTGCCTACCAATTTCAGGAAGCTTTTGCTCGTTCATCTGAAGAAGCTAGTCGCCGCTGATAAACTCGTTAAGGTCAAGAACTCCTACAAGCTTCCATCGGCGCGATCTATTCAAGCAAAAACTGCAGCAGCGCCTGCTGCCGCCAAGAAGCCAGTGAGTTCAAAGCTCAAGGCGGCTGCAAGCATCAAGAAAGCCGCCGTTGCAAAACCGAAAGCGAAAACTGCTGTGAAACCTAAGCCGAAAGCCGTAGTGAAGCCGAAGACAGTCGCGAAATCCAAGGTTGTTGCGAAGCCGAAGGCCGCCGCTGCCGCCAAGCCTAAGGCAGCAGAGAAGGTCAAGAAGGTCGCTCCAAAGCCTAAACCTGCAGCGAAGGCTGCTAAAGTTGCGAAAACACTGTCGCGAACGTCGCCAGGAAAGAGAGCTGCACCGGCGGCAAAGACAAAGAAGGTAGCTGCGAAGAAGCCAAAGACTGTGAAGTCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATAG

Protein sequence

MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKKVAAKKPKTVKSPARKVQARKVKK

Homology

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BLAST of HG10006537 vs. NCBI nr
Match: KAG6599320.1 (Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.9 bits (951), Expect = 8.9e-99
Identity = 233/263 (88.59%), Postives = 242/263 (92.02%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA+VAQP ENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPKAV KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKAA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVVAKPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSRTSPGK+AAPAAK KK
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

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BLAST of HG10006537 vs. NCBI nr
Match: XP_023521173.1 (histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cucurbita pepo subsp. pepo] >XP_023547297.1 histone H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-98
Identity = 233/263 (88.59%), Postives = 241/263 (91.63%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA VAQPAENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAQPAENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVVAKPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSRTSPGK+AAPAAK KK
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of HG10006537 vs. NCBI nr
Match: XP_022946127.1 (histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-98
Identity = 232/263 (88.21%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA+VAQP ENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHK+LP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVVAKPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSRTSPGK+AAPAAK KK
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of HG10006537 vs. NCBI nr
Match: XP_022999095.1 (histone H1-like [Cucurbita maxima])

HSP 1 Score: 362.5 bits (929), Expect = 3.2e-96
Identity = 229/263 (87.07%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA VA P ENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVV KPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSR SPGK+AAPAAK KK
Sbjct: 181 AKSKVVGKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of HG10006537 vs. NCBI nr
Match: KAA0063593.1 (histone H1-like [Cucumis melo var. makuwa] >TYK18434.1 histone H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-94
Identity = 234/267 (87.64%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAV-ASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPF 60
           MSSAADPVVSSDAP+A  A+VAQPAENDSK+KK AASKASKAKKPS AK+ +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSIQAK-TAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVV--K 180
           YKLPSARSIQAK  AAAP A KKPVSSKLKA ASIKK AVAKPKAKTA KPKPKAV   K
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPAVAKPKAKTAAKPKPKAVAKPK 180

Query: 181 PKTVAKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAA 240
           PKTV KSK VAKPK   AAK KAAEKVKKVAPKPK  AKA KVAKTLSRTSPGKRAAPAA
Sbjct: 181 PKTVTKSKTVAKPK--TAAKTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAAPAA 240

Query: 241 KTKKVAAKKPKTVKSPARKVQARKVKK 264
           K KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of HG10006537 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.7e-40
Identity = 144/278 (51.80%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 13  APSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFFQMISEAIVSLKE 72
           AP  V   A P     KAK     K +KAKKP+  ++  ++PTHPP+F+MI +AIV+LKE
Sbjct: 18  APETVKDEANPPAKSGKAK-----KETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKE 77

Query: 73  RTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSYKLPSA------- 132
           RTGSSQ+AITKF EEK K LP+NF+KLLL  LKK VA++KLVKVKNSYKLPS        
Sbjct: 78  RTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLPSGSKPAAAA 137

Query: 133 -------RSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKP--KAKTAVKPKPKAVVK 192
                   + ++K AA P AA KP   K K AA  K AA AKP  KAK A K KP A  K
Sbjct: 138 VPAKKKPAAAKSKPAAKPKAAVKP---KAKPAAKAKPAAKAKPAAKAKPAAKAKPAAKAK 197

Query: 193 PKTVAKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAK--------AAKVAKTLSRTSP 252
           P   AK    AKPKAAAAAKPKAA K K    K K A K         AKVAKT +RT+P
Sbjct: 198 PAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTTTAKVAKTATRTTP 257

Query: 253 GKRAAP-AAKTKKVAAKK--PKTVKSPARKVQARKVKK 264
            ++AAP A   KK   KK   K VKSPA+K   ++ +K
Sbjct: 258 SRKAAPKATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of HG10006537 vs. ExPASy Swiss-Prot
Match: Q9M5W4 (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.7e-37
Identity = 136/250 (54.40%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 11  SDAPSAVASVAQPAENDSK-AKKVAASKASKAKKPSVA---KRTKSSPTHPPFFQMISEA 70
           +D P +   V +  E  SK   K AA K  K KK  +A    ++K + +HP FF+MIS+A
Sbjct: 2   ADTPVSAPVVPEVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDA 61

Query: 71  IVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSYKLPSAR 130
           I +LKERTGSSQYAI KF E+KHKQLP+NFRKLLL HLKKLVA+ KLVKVKNS+KLPSAR
Sbjct: 62  ISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSAR 121

Query: 131 SIQAKTAAAPAAAKKPVSSKLKAAASIKKAAV-AKPKAKTAVKPKPKAVVKPKTVAKSKV 190
           +     A APA AKKP   K K AA  K A + AKPKAK  V  K KA    KTVAK   
Sbjct: 122 A-----APAPALAKKPTIPKPKVAAKPKTAKIGAKPKAKAKVAAKTKATT--KTVAKKIP 181

Query: 191 VAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKKVAAKK 250
            AKPKA  A KPK              AAK AKVAKT +  SPGK+       K V  KK
Sbjct: 182 AAKPKAKTAGKPKTV------------AAKPAKVAKTAAVASPGKK-------KAVPVKK 225

Query: 251 PKTVKSPARK 256
            KTVKSPA K
Sbjct: 242 VKTVKSPAGK 225

[Close]

BLAST of HG10006537 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-34
Identity = 139/273 (50.92%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 2   SSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAK-KPSVAKRTKSSPTHPPFF 61
           S AAD  V S          +PA    K+KK   +KA+K   K +   + K++ +HP + 
Sbjct: 14  SGAADTTVKSPE-------KKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYE 73

Query: 62  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 121
           +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+
Sbjct: 74  EMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASF 133

Query: 122 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 181
           K+PSARS      AAP   K  V +K K   +   AAVA  KAK A K   K     K V
Sbjct: 134 KIPSARSAATPKPAAPVKKKATVVAKPKGKVA---AAVAPAKAKAAAKGTKKPAA--KVV 193

Query: 182 AKSKVVAKPKA-AAAAKPK-----AAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKR-AA 241
           AK+KV AKPKA   AAKPK     A  K K VA KPK   + AK ++T +RTSPGK+ AA
Sbjct: 194 AKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAA 253

Query: 242 PAAK---TKKVAAKKPKTVKSPARKVQARKVKK 264
           PA K   TKK  AK  K VKSPA++   RK KK
Sbjct: 254 PAKKVAVTKKAPAKSVK-VKSPAKRASTRKAKK 273

[Close]

BLAST of HG10006537 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-32
Identity = 130/257 (50.58%), Postives = 154/257 (59.92%), Query Frame = 0


Query: 11  SDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFFQMISEAIVSL 70
           ++ P+ +   A  A  D+ A   A + A+KAKK +  K+ ++SPTH P+ +M+SEAI SL
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADANAAKAKKATAPKK-RASPTHLPYAEMVSEAITSL 65

Query: 71  KERTGSSQYAITKFNEEKHK-QLPTNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQ 130
           KERTGSS YAI KF E+KHK +LP NFRKLL V LKKLVA  KL KVKNSYKL SA    
Sbjct: 66  KERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATKPN 125

Query: 131 AKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTVAKSKVVAKP 190
            K  AAP   KKP +   K  A+ K  A    KAK A KPKP A  KPK V K K  AKP
Sbjct: 126 PKPKAAP---KKPKTGAKKPKAAAKPKAKTPAKAKPATKPKPAA--KPKAVVKPKTPAKP 185

Query: 191 KAAAAAKPKAAEKVKKVAPKPKPAAK---AAKVAKTLSRTSPGKRAAPAAKTKKVAAKKP 250
           K    AKP A  K K    KPKP AK    AK AKT ++ +PGK+ APA K     A   
Sbjct: 186 K----AKPAAKAKPKTAGAKPKPLAKKAGRAKAAKTSAKDTPGKK-APAKK-----AAPS 245

Query: 251 KTVKSPARKVQARKVKK 264
           K   +P RK  +RK KK
Sbjct: 246 KKAATPVRKAPSRKAKK 246

[Close]

BLAST of HG10006537 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-30
Identity = 124/271 (45.76%), Postives = 162/271 (59.78%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           + +  +P+V+   P+ +     P + + KA +V  +K +K  KP  A + ++  +HP + 
Sbjct: 10  VETVPEPIVTE--PTTITEPEVPEKEEPKA-EVEKTKKAKGSKPKKASKPRNPASHPTYE 69

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MI +AIVSLKE+ GSSQYAI KF EEK KQLP NF+KLLL +LKK VA+ KL+KVK S+
Sbjct: 70  EMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSF 129

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KL              AAAKKP  +K KA  + K  +V   KAK A KPK KAVVKPK  
Sbjct: 130 KL-------------SAAAKKPAVAKPKAKTAAKAKSV---KAKPAAKPKAKAVVKPKVA 189

Query: 181 AKSK-VVAKPKAAAAAKPKAAEKVK------KVAPKPKPAAKAAKVAKTLSRTSPGKRAA 240
           +K+K V AKPK AAA     A K K      K   KPK   K AKVAKT  +T+PGK+ A
Sbjct: 190 SKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPGKKVA 249

Query: 241 P----AAKTKKVAAKKPKTVKSPARKVQARK 261
                AAK   V + K K+VKSP +KV  ++
Sbjct: 250 AVKKVAAKKVPVKSVKAKSVKSPVKKVSVKR 261

[Close]

BLAST of HG10006537 vs. ExPASy TrEMBL
Match: A0A6J1G2W2 (histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.6e-99
Identity = 232/263 (88.21%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA+VAQP ENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAAVAQPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHK+LP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKKLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPKAV KPK+ 
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKAVAKPKSA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVVAKPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSRTSPGK+AAPAAK KK
Sbjct: 181 AKSKVVAKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRTSPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of HG10006537 vs. ExPASy TrEMBL
Match: A0A6J1KEC3 (histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.5e-96
Identity = 229/263 (87.07%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           MSSAADPV SSDAP+ VA VA P ENDSK+KK AASKASKAKKPS AKRT+SSPTHPPFF
Sbjct: 1   MSSAADPVASSDAPATVAVVAPPVENDSKSKKAAASKASKAKKPSGAKRTRSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           +MISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  EMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 180
           KLPSARS   K AAAP  AKKP SSKLKAA S+KKAAVAKPKAKTAVKPKPK V KPK  
Sbjct: 121 KLPSARS---KAAAAPVVAKKPASSKLKAAVSVKKAAVAKPKAKTAVKPKPKVVAKPKAA 180

Query: 181 AKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKTKK 240
           AKSKVV KPKA A AK KAAEKVKKVAPKPKPAAK AKVAKTLSR SPGK+AAPAAK KK
Sbjct: 181 AKSKVVGKPKAVAPAKRKAAEKVKKVAPKPKPAAKPAKVAKTLSRASPGKKAAPAAKAKK 240

Query: 241 VAAKKPKTVKSPARKVQARKVKK 264
           VAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 VAAKKPKTVKSPARKVQARKVKK 260

[Close]

BLAST of HG10006537 vs. ExPASy TrEMBL
Match: A0A5D3D4H1 (Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001600 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 234/267 (87.64%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAV-ASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPF 60
           MSSAADPVVSSDAP+A  A+VAQPAENDSK+KK AASKASKAKKPS AK+ +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSIQAK-TAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVV--K 180
           YKLPSARSIQAK  AAAP A KKPVSSKLKA ASIKK AVAKPKAKTA KPKPKAV   K
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPAVAKPKAKTAAKPKPKAVAKPK 180

Query: 181 PKTVAKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAA 240
           PKTV KSK VAKPK   AAK KAAEKVKKVAPKPK  AKA KVAKTLSRTSPGKRAAPAA
Sbjct: 181 PKTVTKSKTVAKPK--TAAKTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAAPAA 240

Query: 241 KTKKVAAKKPKTVKSPARKVQARKVKK 264
           K KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of HG10006537 vs. ExPASy TrEMBL
Match: A0A1S3C278 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.2e-93
Identity = 233/267 (87.27%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAV-ASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPF 60
           MSSAADPVVSSDAP+A  A+VAQPAENDSK+KK AASKASKAKKPS AK+ +SSPTHPPF
Sbjct: 1   MSSAADPVVSSDAPAAADAAVAQPAENDSKSKKAAASKASKAKKPSGAKKARSSPTHPPF 60

Query: 61  FQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNS 120
            QMISEAIVSLKERTGSSQYAITKF EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNS
Sbjct: 61  LQMISEAIVSLKERTGSSQYAITKFTEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNS 120

Query: 121 YKLPSARSIQAK-TAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVV--K 180
           YKLPSARSIQAK  AAAP A KKPVSSKLKA ASIKK AVAKPKAKTA K KPKAV   K
Sbjct: 121 YKLPSARSIQAKAAAAAPVATKKPVSSKLKAVASIKKPAVAKPKAKTAAKSKPKAVAKPK 180

Query: 181 PKTVAKSKVVAKPKAAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAA 240
           PKTV KSK VAKPK   AAK KAAEKVKKVAPKPK  AKA KVAKTLSRTSPGKRAAPAA
Sbjct: 181 PKTVTKSKTVAKPK--TAAKTKAAEKVKKVAPKPKAGAKATKVAKTLSRTSPGKRAAPAA 240

Query: 241 KTKKVAAKKPKTVKSPARKVQARKVKK 264
           K KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KAKKVAAKKPKTVKSPARKVQARKVKK 265

[Close]

BLAST of HG10006537 vs. ExPASy TrEMBL
Match: A0A6J1CNP7 (histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90
Identity = 226/265 (85.28%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MSSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFF 60
           M+SAADP+V SDAP+A A+      ND+K KK A+SKASKAKKPS AKR KSSPTHPPFF
Sbjct: 1   MASAADPIVPSDAPAADAAEVLTVANDAKPKKAASSKASKAKKPSGAKRPKSSPTHPPFF 60

Query: 61  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 120
           QMISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKLLLVHLKKLVAADKLVKVKNSY
Sbjct: 61  QMISEAIVSLKERTGSSQYAITKFSEEKHKQLPSNFRKLLLVHLKKLVAADKLVKVKNSY 120

Query: 121 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASI-KKAAVAKPKAKTAVKPKPKAVVKPKT 180
           KLPSARSIQAK AAAP AAKKP SSKLKAAAS+ KKAAV KPKAKTAVKPKPKAVVKPKT
Sbjct: 121 KLPSARSIQAK-AAAPVAAKKPASSKLKAAASVKKKAAVVKPKAKTAVKPKPKAVVKPKT 180

Query: 181 VAKSKVVAKPK-AAAAAKPKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAKT 240
           ++KSKVVAKPK AAAAAKPKAA KV K A K KPAA+ AKVAKTL++TSPGKRAAPAAK 
Sbjct: 181 ISKSKVVAKPKAAAAAAKPKAAAKV-KAAAKAKPAARPAKVAKTLTQTSPGKRAAPAAKA 240

Query: 241 KKVAAKKPKTVKSPARKVQARKVKK 264
           KKVAAKKPKTVKSPARKVQARKVKK
Sbjct: 241 KKVAAKKPKTVKSPARKVQARKVKK 263

[Close]

BLAST of HG10006537 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-35
Identity = 139/273 (50.92%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 2   SSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAK-KPSVAKRTKSSPTHPPFF 61
           S AAD  V S          +PA    K+KK   +KA+K   K +   + K++ +HP + 
Sbjct: 14  SGAADTTVKSPE-------KKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYE 73

Query: 62  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 121
           +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+
Sbjct: 74  EMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASF 133

Query: 122 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 181
           K+PSARS      AAP   K  V +K K   +   AAVA  KAK A K   K     K V
Sbjct: 134 KIPSARSAATPKPAAPVKKKATVVAKPKGKVA---AAVAPAKAKAAAKGTKKPAA--KVV 193

Query: 182 AKSKVVAKPKA-AAAAKPK-----AAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKR-AA 241
           AK+KV AKPKA   AAKPK     A  K K VA KPK   + AK ++T +RTSPGK+ AA
Sbjct: 194 AKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAA 253

Query: 242 PAAK---TKKVAAKKPKTVKSPARKVQARKVKK 264
           PA K   TKK  AK  K VKSPA++   RK KK
Sbjct: 254 PAKKVAVTKKAPAKSVK-VKSPAKRASTRKAKK 273

[Close]

BLAST of HG10006537 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-29
Identity = 133/268 (49.63%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 10  SSDAPSAVASV-AQPAENDSKAKKVAASKASKAKKPSVAKRTKSSPTHPPFFQMISEAIV 69
           ++DAP   A+V  +PA    K K V   K  K    +  KRT SS  HP + +MI +AIV
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSS--HPTYEEMIKDAIV 76

Query: 70  SLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSYKLPSARSI 129
           +LKERTGSSQYAI KF EEK K+LP  FRKLLL++LK+LVA+ KLVKVK S+KLPSA   
Sbjct: 77  TLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSA--- 136

Query: 130 QAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAV--KPKPKAVVKPKTVAKSKVV 189
            AK ++  AAA+K   +K K A      AV K K K A   K K    VKPKT A  KV 
Sbjct: 137 SAKASSPKAAAEKSAPAKKKPAT----VAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVT 196

Query: 190 AKPKAAAAAK-PKAAEKVKKVAPKPKPAAKAAKVAKTLSRTSPGKRAAPAAK-------T 249
           AK KA    +   AA K K V  KPK  A+ AK AKT   TSP K+A  A K        
Sbjct: 197 AKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATK 256

Query: 250 KKVAAK---KPKTVKSPARKVQARKVKK 264
           KK   K   KPKTVKSPA++  +R VKK
Sbjct: 257 KKTPVKKVVKPKTVKSPAKRASSR-VKK 274

[Close]

BLAST of HG10006537 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-22
Identity = 90/198 (45.45%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 2   SSAADPVVSSDAPSAVASVAQPAENDSKAKKVAASKASKAK-KPSVAKRTKSSPTHPPFF 61
           S AAD  V S          +PA    K+KK   +KA+K   K +   + K++ +HP + 
Sbjct: 14  SGAADTTVKSPE-------KKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYE 73

Query: 62  QMISEAIVSLKERTGSSQYAITKFNEEKHKQLPTNFRKLLLVHLKKLVAADKLVKVKNSY 121
           +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++KLVKVK S+
Sbjct: 74  EMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASF 133

Query: 122 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAVKPKPKAVVKPKTV 181
           K+PSARS      AAP   K  V +K KA+ +  + +   P  K A   K  AV K    
Sbjct: 134 KIPSARSAATPKPAAPVKKKATVVAKPKASRTSTRTS---PGKKVAAPAKKVAVTKKAPA 193

Query: 182 AKSKVVAKPKAAAAAKPK 199
              KV +  K A+  K K
Sbjct: 194 KSVKVKSPAKRASTRKAK 201

[Close]

BLAST of HG10006537 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-11
Identity = 68/165 (41.21%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 37  KASKAKKPSVAKRTKSSPTHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPTN 96
           K   AKKP   K T    THPP+FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +
Sbjct: 9   KTPAAKKPRKPKTT----THPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPES 68

Query: 97  FRKLLLVHLKKLVAADKLVKVKNSYKLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKK 156
           FRK L + LK  VA  KLVK++ SYKL  + + +  T       KK +  + K      +
Sbjct: 69  FRKTLSLQLKNSVAKGKLVKIRASYKL--SDTTKMITRQQDKKNKKNMKQEDKEITKRTR 128

Query: 157 AAVAKPKAKTAV-----KPKPKAVVKPKTVAKSKVVAKPKAAAAA 196
           ++  +PK   +V     K K K   +PK++  S  V K KA  A+
Sbjct: 129 SSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSS--VGKKKAMKAS 165

[Close]

BLAST of HG10006537 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 48.5 bits (114), Expect = 9.4e-06
Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 62  MISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPTNFRKLLLVHLKKLVAADKLVKVKNSY 121
           MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  KLVK++ SY
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLPSARSIQAKTAAAPAAAKKPVSSKLKAAASIKKAAVAKPKAKTAV-----KPKPKAVV 181
           KL  + + +  T       KK +  + K      +++  +PK   +V     K K K   
Sbjct: 61  KL--SDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKAR 120

Query: 182 KPKTVAKSKVVAKPKAAAAA 196
           +PK++  S  V K KA  A+
Sbjct: 121 QPKSIKSS--VGKKKAMKAS 136

The following BLAST results are available for this feature:

BLAST of HG10006537 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599320.1	8.9e-99	88.59	Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023521173.1	2.0e-98	88.59	histone H1-like [Cucurbita pepo subsp. pepo] >XP_023521452.1 histone H1-like [Cu...	[more]
XP_022946127.1	2.0e-98	88.21	histone H1-like [Cucurbita moschata] >KAG7030316.1 Histone H1.2 [Cucurbita argyr...	[more]
XP_022999095.1	3.2e-96	87.07	histone H1-like [Cucurbita maxima]	[more]
KAA0063593.1	3.0e-94	87.64	histone H1-like [Cucumis melo var. makuwa] >TYK18434.1 histone H1-like [Cucumis ...	[more]

BLAST of HG10006537 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	5.7e-40	51.80	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
Q9M5W4	7.7e-37	54.40	Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
P26569	4.7e-34	50.92	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P23444	3.4e-32	50.58	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]
P08283	2.4e-30	45.76	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of HG10006537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2W2	9.6e-99	88.21	histone H1-like OS=Cucurbita moschata OX=3662 GN=LOC111450301 PE=3 SV=1	[more]
A0A6J1KEC3	1.5e-96	87.07	histone H1-like OS=Cucurbita maxima OX=3661 GN=LOC111493576 PE=3 SV=1	[more]
A0A5D3D4H1	1.4e-94	87.64	Histone H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0016...	[more]
A0A1S3C278	1.2e-93	87.27	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103496189 PE=3 SV=1	[more]
A0A6J1CNP7	1.6e-90	85.28	histone H1-like OS=Momordica charantia OX=3673 GN=LOC111012938 PE=3 SV=1	[more]

BLAST of HG10006537 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	3.3e-35	50.92	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	4.6e-29	49.63	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	3.2e-22	45.45	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	5.7e-11	41.21	histone H1-3	[more]
AT2G18050.2	9.4e-06	39.29	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 148..162 score: 42.22 coord: 42..63 score: 40.4 coord: 69..86 score: 38.89 coord: 200..219 score: 26.67 coord: 178..195 score: 32.72
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 7.9E-32 score: 121.7
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 3.7E-15 score: 56.0
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 28.520943
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..127 e-value: 1.42992E-14 score: 65.3351
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 50..141 e-value: 3.5E-19 score: 70.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..263
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 3..263
None	No IPR available	PANTHER	PTHR11467:SF128	SUBFAMILY NOT NAMED	coord: 3..263
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006537.1	HG10006537.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity