HG10006530 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10006530
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPathogenesis-related protein PR-4-like
LocationChr07: 19579576 .. 19580669 (+)
RNA-Seq ExpressionHG10006530
SyntenyHG10006530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATTTGAATGTTGTGAGTGCATTTTGTTCAACATGGGATGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGACTCTTGTGGCCTATGTTTATCGGTATGTTTTTACGCTAGTTCGAGAATGTTTTGGTATCTGTTTGGAATGACTTTAAAATATTTTTTAAGCATTTAAAAAGTGTTCAAACAGATTTAATGTTGTTTTCTTTTGGATAAGTACAAAACCTTATCAACATAGGACTTGTATTATCTATACACCCTTAACACTTTTTTTTATTACATTCATCGTTGTCACATATATGCATTAAAAATTAGTTTCATTCACAGGGATTAATCTCATTGCATTGTATAGATATATATGGTTGAAGTATATCGAGATAATGTGGATTTATCCCTCCCTCTCTATACCTCTGGAGTAATTTGATATTGCCCACTTTAGATAATAAACCAATTAATCAAAAGGAGAGATTGATCCAAAGTTGGAATACTATTCATGATCGTTTTCTTTTCCATTTTGAAAAGCCTTGAGACCTAATGTAAAATAAATTAATAGGATATTGTAAGACTTCGCGATGATACTATGTTAATTTAGTACTAGATTTGAAGTATTAGTCTCTTTAGCTTAAACACAACTCAACTGATGATTAAAACATATAACTTTGATAAAAAAAAATCAGAAATTTGAATCCTGACCCCTACCCCACATTTGGTTAATAATAAGAAGAAAAAAAAGTCTCTCTAACCCTCTTCTATTTAACGTTAGGTACACGAAAAATGTAATAATTTATTTGATGGCAAAAAAAATGCATGAATATGCAGGTGACGAATATTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGTGTTTCAAAATCTCGATACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA

mRNA sequence

ATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATTTGAATGTTGTGAGTGCATTTTGTTCAACATGGGATGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGACTCTTGTGGCCTATGTTTATCGGTGACGAATATTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGTGTTTCAAAATCTCGATACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA

Coding sequence (CDS)

ATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATTTGAATGTTGTGAGTGCATTTTGTTCAACATGGGATGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGACTCTTGTGGCCTATGTTTATCGGTGACGAATATTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGTGTTTCAAAATCTCGATACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA

Protein sequence

MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
Homology
[Close]
BLAST of HG10006530 vs. NCBI nr
Match: KAA0063600.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 112/124 (90.32%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCGLCL VTN++TG +ETVRIVDQCSNGGLDLD+GVFQ+LDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of HG10006530 vs. NCBI nr
Match: XP_023545388.1 (pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 7.7e-61
Identity = 107/124 (86.29%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFN YNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 12  LSKAQSASNVRATFNFYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 71

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           G+DSCGLCL VTN ET A++TVRIVDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLT+NYD
Sbjct: 72  GEDSCGLCLLVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYD 131

Query: 121 FVNC 125
           FVNC
Sbjct: 132 FVNC 135

[Close]
BLAST of HG10006530 vs. NCBI nr
Match: XP_023521170.1 (pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 7.7e-61
Identity = 107/124 (86.29%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFN YNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSASNVRATFNFYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           G+DSCGLCL VTN ET A++TVRIVDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLT+NYD
Sbjct: 79  GEDSCGLCLLVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]
BLAST of HG10006530 vs. NCBI nr
Match: KAG6599313.1 (Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 107/124 (86.29%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFNLYNAP+INWD N VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSASNVRATFNLYNAPEINWDFNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           G+DSCGLCL VTN ETGA++TVRIVDQC+NGGLDLD+GVF++LDTDGNGNANGFLTV+YD
Sbjct: 79  GEDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFRSLDTDGNGNANGFLTVDYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]
BLAST of HG10006530 vs. NCBI nr
Match: XP_022946139.1 (pathogenesis-related protein PR-4-like [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 108/124 (87.10%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           G+DSCGLCL VTN ETGA++ VRIVDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLTV+YD
Sbjct: 79  GEDSCGLCLLVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-49
Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCG CL VTN  TG + TVRIVDQCSNGGLDLD+ VF  LDT+G G   G LTVNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-49
Identity = 83/119 (69.75%), Postives = 98/119 (82.35%), Query Frame = 0 

Query: 6   SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSC 65
           S  N+RAT+++YN   + WDLN VSA+CSTWDA+KPL WR +YGWTAFCGPVGP+G+DSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 66  GLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC 125
           G CL VTN  TGA+ TVRIVDQCSNGGLDLD+ VF+ +DTDGNGN  G L VNY FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-49
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0 

Query: 6   SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSC 65
           S  N+RAT+++YN   + WDLN VSA+CSTWDA+KP  WRS+YGWTAFCGPVGP+G+DSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 66  GLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC 125
           G CL VTN  TGA+ TVRIVDQCSNGGLDLDI VFQ +DTDG GN  G L VNY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.2e-49
Identity = 85/124 (68.55%), Postives = 98/124 (79.03%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+
Sbjct: 22  MAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPR 81

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCG CL VTN  TG + TVRIVDQCSNGGLDLD+ VF  LDT+G G   G L VNY+
Sbjct: 82  GQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYE 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.0e-47
Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           ++ AQS +N+RAT++LYN   INWDL   S +C+TWDADKPLEWR +YGWTAFCGP GP 
Sbjct: 20  VAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPT 79

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQ SCG CL VTN  TG +ETVRIVDQC NGGLDLD+ VF  LDT+G G   G L VNY+
Sbjct: 80  GQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYE 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match: A0A5D3D4F5 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001530 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.1e-64
Identity = 112/124 (90.32%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP 
Sbjct: 20  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPH 79

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCGLCL VTN++TG +ETVRIVDQCSNGGLDLD+GVFQ+LDTDGNGNANGFLTVNYD
Sbjct: 80  GQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYD 139

Query: 121 FVNC 125
           FVNC
Sbjct: 140 FVNC 143

[Close]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match: A0A6J1KG47 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493585 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.4e-61
Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSASNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCGLCL VTN ETGA++TVRIVDQC+NGGLDLD+GVFQ+LDTDGNGNANGFL V+YD
Sbjct: 79  GQDSCGLCLLVTNTETGAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLIVDYD 138

Query: 121 FVNC 125
           FV C
Sbjct: 139 FVKC 142

[Close]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match: A0A6J1G2Y5 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450308 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.4e-61
Identity = 108/124 (87.10%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQ
Sbjct: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           G+DSCGLCL VTN ETGA++ VRIVDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLTV+YD
Sbjct: 79  GEDSCGLCLLVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYD 138

Query: 121 FVNC 125
           FVNC
Sbjct: 139 FVNC 142

[Close]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match: A0A0A0LG74 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.3e-61
Identity = 108/124 (87.10%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA++PLEWRSQYGWTAFCGP+GP 
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQ SCGLCL VTN++TGA++TVRIVDQCSNGGLDLD+GVFQ+LDTDGNG ANGFLT+NYD
Sbjct: 61  GQHSCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYD 120

Query: 121 FVNC 125
           FVNC
Sbjct: 121 FVNC 124

[Close]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match: A0A6J1CMK0 (pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC111013008 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60
Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 1   MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQ 60
           +S+ QSGSN+RAT+NLYNAPQINWDLN VSAFC+TWDA++PLEWRSQYGWTAFCGPVGP 
Sbjct: 22  VSEGQSGSNVRATYNLYNAPQINWDLNAVSAFCATWDANQPLEWRSQYGWTAFCGPVGPH 81

Query: 61  GQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYD 120
           GQDSCG CL VTN ETGA++TVRIVDQCSNGGLDLD+GVFQ+LDT+GNGNANGFLTVNYD
Sbjct: 82  GQDSCGQCLLVTNTETGAQQTVRIVDQCSNGGLDLDVGVFQSLDTNGNGNANGFLTVNYD 141

Query: 121 FVNC 125
           FVNC
Sbjct: 142 FVNC 145

[Close]
BLAST of HG10006530 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 79/120 (65.83%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 5   QSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDS 64
           +S SN+RAT++ YN  Q NWDL  VSA+CSTWDADKP  WRS+YGWTAFCGP GP+GQ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 65  CGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC 124
           CG CL V N  T A  TVRIVDQCSNGGLDLD+ +F  +DTDG G   G L V+Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:
BLAST of HG10006530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063600.11.7e-6390.32pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18427.1 pa... [more]
XP_023545388.17.7e-6186.29pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo][more]
XP_023521170.17.7e-6186.29pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo][more]
KAG6599313.11.0e-6086.29Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022946139.11.3e-6087.10pathogenesis-related protein PR-4-like [Cucurbita moschata][more]
BLAST of HG10006530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P290621.9e-4969.35Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P097613.2e-4969.75Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1[more]
P097623.2e-4971.43Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1[more]
P290639.2e-4968.55Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P320453.0e-4766.94Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
BLAST of HG10006530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D4F58.1e-6490.32Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1KG476.4e-6187.10pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
A0A6J1G2Y56.4e-6187.10pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A0A0LG748.3e-6187.10Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010340 PE=4... [more]
A0A6J1CMK04.1e-6085.48pathogenesis-related protein PR-4-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of HG10006530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04720.11.7e-4565.83pathogenesis-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 59..77
score: 64.56
coord: 78..96
score: 83.86
coord: 40..58
score: 81.4
coord: 99..123
score: 57.33
IPR001153Barwin domainPFAMPF00967Barwincoord: 7..124
e-value: 1.4E-50
score: 170.1
IPR001153Barwin domainPROSITEPS51174BARWIN_3coord: 5..124
score: 73.648567
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 5..124
e-value: 5.4E-51
score: 173.5
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 6..124
IPR044301Pathogenesis-related protein-4PANTHERPTHR46351WOUND-INDUCED PROTEIN WIN2coord: 5..124
NoneNo IPR availablePANTHERPTHR46351:SF3WOUND-INDUCED PROTEIN WIN2coord: 5..124
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 117..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10006530.1HG10006530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006952 defense response
molecular_function GO:0004540 ribonuclease activity