Homology
BLAST of HG10006488 vs. NCBI nr
Match:
XP_038890443.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hispida] >XP_038890444.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hispida])
HSP 1 Score: 2331.2 bits (6040), Expect = 0.0e+00
Identity = 1195/1224 (97.63%), Postives = 1211/1224 (98.94%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVAS+A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1 MVASIANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGDN+KE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNDKELKKEKESDGKKGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYR 180
+L+KEIELEAHQKRGDREVE DRYKGRA R RDRDR RDRDRRDGDRDRDRDRDRYR
Sbjct: 121 ELEKEIELEAHQKRGDREVEGDRYKGRAGDRGRDRDRDRGRDRDRRDGDRDRDRDRDRYR 180
Query: 181 DRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGD 240
DRDWDRDKDRD+HRDR ERDERHGGRDRDDDGD+DYRRSGRQRDRNRRNGYEEN+SYRGD
Sbjct: 181 DRDWDRDKDRDRHRDRCERDERHGGRDRDDDGDDDYRRSGRQRDRNRRNGYEENKSYRGD 240
Query: 241 AEDGNGNWRGDRDD-TQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV 300
AEDGNGNWRGDRD+ TQN RH P++HEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV
Sbjct: 241 AEDGNGNWRGDRDNLTQNGRHRPIDHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV 300
Query: 301 HVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVDN 360
HVSQIATRRISNAKDVVKRDQEV+VKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D+
Sbjct: 301 HVSQIATRRISNAKDVVKRDQEVFVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADD 360
Query: 361 GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV 420
GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV
Sbjct: 361 GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV 420
Query: 421 SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS 480
SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS
Sbjct: 421 SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS 480
Query: 481 RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAY 540
RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAY
Sbjct: 481 RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540
Query: 541 DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600
DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK
Sbjct: 541 DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600
Query: 601 TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660
TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 601 TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660
Query: 661 DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720
DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI
Sbjct: 661 DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720
Query: 721 VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780
VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 721 VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780
Query: 781 DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840
D+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK
Sbjct: 781 DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840
Query: 841 VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900
VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT
Sbjct: 841 VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900
Query: 901 GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960
GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL
Sbjct: 901 GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960
Query: 961 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020
ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT
Sbjct: 961 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020
Query: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080
GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR
Sbjct: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080
Query: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140
AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY
Sbjct: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140
Query: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1200
IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1200
Query: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1224
QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1224
BLAST of HG10006488 vs. NCBI nr
Match:
KAA0063640.1 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo var. makuwa] >TYK18386.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo var. makuwa])
HSP 1 Score: 2299.6 bits (5958), Expect = 0.0e+00
Identity = 1187/1231 (96.43%), Postives = 1204/1231 (97.81%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1 MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-------RDGDRDRD 180
+L+KEIELEAHQK G+R+VEDDRY+ RA GDRGRDRDR RDRDR R DRD D
Sbjct: 121 ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRDRDRDRGRDRHKDRDVD 180
Query: 181 RDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYE 240
RDRDRYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYE
Sbjct: 181 RDRDRYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYE 240
Query: 241 ENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDF 300
ENES+RGD +DGNGNWRGDR N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDF
Sbjct: 241 ENESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDF 300
Query: 301 RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPL 360
RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPL
Sbjct: 301 RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360
Query: 361 KKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
KKKD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI
Sbjct: 361 KKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
Query: 421 ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK
Sbjct: 421 ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
Query: 481 NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELR 540
NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELR
Sbjct: 481 NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540
Query: 541 GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVI
Sbjct: 541 GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVI 600
Query: 601 GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601 GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
Query: 661 FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR
Sbjct: 661 FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
Query: 721 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
Query: 781 HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781 HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
Query: 841 APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841 APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
Query: 901 AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901 AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
Query: 961 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPT 1200
VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1200
Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1225
BLAST of HG10006488 vs. NCBI nr
Match:
XP_023521965.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo] >XP_023546823.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2299.2 bits (5957), Expect = 0.0e+00
Identity = 1179/1225 (96.24%), Postives = 1204/1225 (98.29%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1 MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
+L KEIELEAHQKRGDR+V+DDRYKGRA GDRGRDRDR RDRDR RDGDR+RDRDRDRY
Sbjct: 121 ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDGDRNRDRDRDRY 180
Query: 181 RDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRG 240
RDRDWDRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE YRG
Sbjct: 181 RDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGYRG 240
Query: 241 DAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
DA DGN NWR DRD TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKEGL
Sbjct: 241 DARDGNDNWRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGL 300
Query: 301 VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
VHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301 VHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360
Query: 361 NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361 DGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLS 420
Query: 421 VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
V++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421 VNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 480
Query: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540
Query: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG
Sbjct: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
Query: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
Query: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
PDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
Query: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
Query: 781 GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781 GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
Query: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
Query: 901 TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
TGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901 TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
Query: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
RAQDVRKQLLSIMDKYKLDVVSAG+NFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGRNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1200
Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1223
BLAST of HG10006488 vs. NCBI nr
Match:
XP_008455589.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo])
HSP 1 Score: 2295.8 bits (5948), Expect = 0.0e+00
Identity = 1186/1229 (96.50%), Postives = 1203/1229 (97.88%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1 MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-----RDGDRDRDRD 180
+L+KEIELEAHQK G+R+VEDDRY+ RA GDRGRDRDR RDR R RD DRDRDR
Sbjct: 121 ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRGRDRHKDRDVDRDRDRY 180
Query: 181 RDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEEN 240
RDR RDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYEEN
Sbjct: 181 RDRDRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYEEN 240
Query: 241 ESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG 300
ES+RGD +DGNGNWRGDR N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDFRG
Sbjct: 241 ESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRG 300
Query: 301 KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK 360
KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKK
Sbjct: 301 KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK 360
Query: 361 KDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
KD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS
Sbjct: 361 KDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
Query: 421 GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP
Sbjct: 421 GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
Query: 481 EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGV 540
EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGV
Sbjct: 481 EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540
Query: 541 GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 600
GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGE
Sbjct: 541 GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGE 600
Query: 601 TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE
Sbjct: 601 TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
Query: 661 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP
Sbjct: 661 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
Query: 721 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL
Sbjct: 721 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
Query: 781 TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP
Sbjct: 781 TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
Query: 841 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG
Sbjct: 841 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
Query: 901 RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP
Sbjct: 901 RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
Query: 961 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII
Sbjct: 961 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
Query: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS
Sbjct: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
Query: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE
Sbjct: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
Query: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKM 1200
NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKM
Sbjct: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKM 1200
Query: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
SKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223
BLAST of HG10006488 vs. NCBI nr
Match:
KAG6599282.1 (ATP-dependent RNA helicase dhx8, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2294.2 bits (5944), Expect = 0.0e+00
Identity = 1178/1227 (96.01%), Postives = 1202/1227 (97.96%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1 MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR---RDGDRDRDRDRD 180
+L KEIELEAHQKRGDR+V+DDRYKGRA GDRGRDRDR RDRDR RDGDR+RDRDRD
Sbjct: 121 ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDRDGDRNRDRDRD 180
Query: 181 RYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESY 240
RYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE Y
Sbjct: 181 RYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGY 240
Query: 241 RGDAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKE 300
GD DGNGN R DRD TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKE
Sbjct: 241 TGDTRDGNGNRRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKE 300
Query: 301 GLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKD 360
GLVHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD
Sbjct: 301 GLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKD 360
Query: 361 VDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGV 420
D+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGV
Sbjct: 361 ADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGV 420
Query: 421 LSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEG 480
LSV++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEG
Sbjct: 421 LSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEG 480
Query: 481 SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGL 540
SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGL
Sbjct: 481 SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL 540
Query: 541 SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600
SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG
Sbjct: 541 SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600
Query: 601 SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660
SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC
Sbjct: 601 SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660
Query: 661 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDL 720
TGPDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDL
Sbjct: 661 TGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDL 720
Query: 721 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780
RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE
Sbjct: 721 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780
Query: 781 PEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840
PEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG
Sbjct: 781 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840
Query: 841 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900
KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA
Sbjct: 841 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900
Query: 901 GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960
GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP
Sbjct: 901 GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960
Query: 961 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020
QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM
Sbjct: 961 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020
Query: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080
IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS
Sbjct: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080
Query: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140
LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ
Sbjct: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140
Query: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSK 1200
PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSK
Sbjct: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSK 1200
Query: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1224
RKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1225
BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match:
Q38953 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)
HSP 1 Score: 1880.1 bits (4869), Expect = 0.0e+00
Identity = 988/1213 (81.45%), Postives = 1066/1213 (87.88%), Query Frame = 0
Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
L KL +LSLVS VC+ELETHLG +KVLAEFI ++GR ETVDEFD LKE GAEMPDYF
Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65
Query: 72 VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
VRSLL IH I PP+ K KK++E D + KF+ LAI D +++ K+L+KEIE EA
Sbjct: 66 VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDKVKELEKEIEREAE 125
Query: 132 QKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDRD 191
++R R+ DR RDRDRR+ RDRDRDR+R DRD RD
Sbjct: 126 ERR--------------------REEDRNRDRDRRESGRDRDRDRNR------DRDDRRD 185
Query: 192 KHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRGD 251
+HRDR R+R D+ ED R R R+R R +G G+ ED + R
Sbjct: 186 RHRDR--------ERNRGDEEGEDRRSDRRHRERGRGDG--------GEGEDRRRDRRA- 245
Query: 252 RDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISN 311
+D+ E N EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQ+ATRR+
Sbjct: 246 KDEYVEEDKGGAN-EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDK 305
Query: 312 AKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-KDVDNGPRMNPSDTKD 371
AK+ VKRD EVYVKVIS+S K SLSMRDVDQ++G+DL+PL+K D D+ R NPS
Sbjct: 306 AKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTK 365
Query: 372 DGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGD 431
DG V +TG+SGI+IVE++ PSRRPLK+MSSPERWEAKQLIASGVL V E+P YD++GD
Sbjct: 366 DGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGD 425
Query: 432 GLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIK 491
G+LYQEEGAEEELEIE+NEDEPAFLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL K
Sbjct: 426 GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTK 485
Query: 492 ERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAYG 551
ERRE+REQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAYDMPEWKKDA+G
Sbjct: 486 ERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFG 545
Query: 552 KDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 611
K +FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA
Sbjct: 546 KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 605
Query: 612 GYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 671
GYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM
Sbjct: 606 GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 665
Query: 672 LLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 731
LLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKF
Sbjct: 666 LLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF 725
Query: 732 SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEE 791
SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEE
Sbjct: 726 SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEE 785
Query: 792 IDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEAS 851
ID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEAS
Sbjct: 786 IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEAS 845
Query: 852 LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 911
LTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTE
Sbjct: 846 LTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 905
Query: 912 SAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 971
SAYRNEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLG
Sbjct: 906 SAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLG 965
Query: 972 ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 1031
ALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQ
Sbjct: 966 ALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQ 1025
Query: 1032 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1091
AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSI
Sbjct: 1026 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSI 1085
Query: 1092 MDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1151
MDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQ
Sbjct: 1086 MDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1145
Query: 1152 PDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRY 1211
PDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRY
Sbjct: 1146 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRY 1168
Query: 1212 HEPNSWRLSKRRA 1224
HEPNSWRLSKRRA
Sbjct: 1206 HEPNSWRLSKRRA 1168
BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match:
A2A4P0 (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)
HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 740/1230 (60.16%), Postives = 931/1230 (75.69%), Query Frame = 0
Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
L KLEYLSLVSKVC+EL+ HLG DK LAEF+ + T D F A L +NGAE D
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 72 VRSLLRIIHLILPPQKGDNEKE--FKKEKESDGKKGKF-----------RALAIGDDRER 131
+ +LLR+I + PP K K+ K + E + + F R + +D +
Sbjct: 82 ISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTMLDEEDVKV 141
Query: 132 AKDLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDR 191
A D+ KE+E G + D ++ R + R R RDR RDRD RD DRDRDRDRDR
Sbjct: 142 AVDVLKELEALMPSAAGQEKQRDPEHRDRTKKKKRSRSRDRDRDRD-RDRDRDRDRDRDR 201
Query: 192 YRDRDWDRDKDRDKHRDRYERD--ERHGGRDRDDDGDEDYRRSGRQRDRNR---RNGYEE 251
+DR+ DRD++RD+ RDR ERD RH R R + R G+ R R+R ++ +++
Sbjct: 202 DKDRERDRDRERDRERDR-ERDHKRRHRSRSRSHSRTRE-RTKGKSRYRSRSRSQSPFKD 261
Query: 252 NESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFR 311
+ E WR D P EP + +Y G+V+ +M GCFVQL R
Sbjct: 262 RKDREKYGERNLDRWRDKHVDR------PPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLR 321
Query: 312 GK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLP 371
+ EGLVH+S++ R++N DVV + Q V VKV+S +G K SLSM+DVDQ +G+DL P
Sbjct: 322 KRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNP 381
Query: 372 LKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL 431
+++++ S D P + +S ++ +D + R+ L R+S PE+WE KQ+
Sbjct: 382 NRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKWEIKQM 441
Query: 432 IASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIF 491
IA+ VLS E+P +D+E L ++ +E+LEIEL E+EP FL+G ++ S+DMSP+KI
Sbjct: 442 IAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIV 501
Query: 492 KNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQEL 551
KNP+GSLS+AA +QSAL KERRE+++ Q+ +DSIP LN+ W DPLP+ R +A +
Sbjct: 502 KNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANM 561
Query: 552 RGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 611
RG+G+ D+PEWKK A+ G S+G+K+++SI EQR+SLPIYKLK++L+QAVHDNQ+L+
Sbjct: 562 RGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILI 621
Query: 612 VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 671
VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY
Sbjct: 622 VIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYT 681
Query: 672 IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLV 731
IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFGLLK+ V
Sbjct: 682 IRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTV 741
Query: 732 KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 791
++R D++LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PETDYLDA+LITV+
Sbjct: 742 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 801
Query: 792 QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 851
QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF
Sbjct: 802 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 861
Query: 852 EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 911
+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AK
Sbjct: 862 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 921
Query: 912 QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 971
QRAGRAGRTGPGKCYRLYTE AYR+EM T +PEIQR NL T L++KAMGINDLLSFDF
Sbjct: 922 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 981
Query: 972 MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1031
MD P + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+
Sbjct: 982 MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEM 1041
Query: 1032 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1091
LTI++M+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+EN
Sbjct: 1042 LTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYEN 1101
Query: 1092 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1151
F+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+ +++KAI +GFF +AA+KDPQEGYR
Sbjct: 1102 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1161
Query: 1152 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1211
TL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP FFKV+D
Sbjct: 1162 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1221
Query: 1212 PTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1221
PTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1222 PTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239
BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match:
Q14562 (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)
HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 731/1236 (59.14%), Postives = 918/1236 (74.27%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
++ S + L KLEYLSLVSKVC+EL+ HLG DK LAEF+ + T D F A L
Sbjct: 11 LIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASL 70
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKE--FKKEKESDGKKGKF----------- 120
+NGAE D + +LLR+I + PP K K+ K + E + K F
Sbjct: 71 VKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSV 130
Query: 121 RALAIGDDRERAKDLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRD 180
R + DD + A D+ KE+E G + D ++ R + R R RDR RDRDR
Sbjct: 131 RTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDR-- 190
Query: 181 GDRDRDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNR 240
DR+R+RDRD R R R + R + R+R + R+ R R +DR
Sbjct: 191 -DRERNRDRDHKR-RHRSRSRSRSRTRERNKVKSRYRSRSRS---------QSPPKDRKD 250
Query: 241 RNGYEENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFV 300
R+ Y E R WR D P EP + +Y G+V+ +M GCFV
Sbjct: 251 RDKYGERNLDR---------WRDKHVDR------PPPEEPTIGDIYNGKVTSIMQFGCFV 310
Query: 301 QLNDFRGK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHS 360
QL R + EGLVH+S++ R++N DVV + Q V VKV+S +G K SLSM+DVDQ +
Sbjct: 311 QLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQET 370
Query: 361 GKDLLPLKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPER 420
G+DL P +++++ S D P + +S ++ +D + R+ L R+S PE+
Sbjct: 371 GEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEK 430
Query: 421 WEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDM 480
WE KQ+IA+ VLS E+P +D+E L ++ +E+LEIEL E+EP FL+G ++ S+DM
Sbjct: 431 WEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDM 490
Query: 481 SPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGER 540
SP+KI KNP+GSLS+AA +QSAL KERRE+++ Q+ +DSIP LN+ W DPLP+ R
Sbjct: 491 SPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGR 550
Query: 541 HLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVH 600
+A +RG+G+ D+PEWKK A+ G S+G+K+++SI EQR+SLPIYKLK++L+QAVH
Sbjct: 551 QIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVH 610
Query: 601 DNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 660
DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG
Sbjct: 611 DNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLG 670
Query: 661 EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFG 720
+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFG
Sbjct: 671 QEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFG 730
Query: 721 LLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 780
LLK+ V++R D++LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PETDYLDA
Sbjct: 731 LLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDA 790
Query: 781 ALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSE 840
+LITV+QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSE
Sbjct: 791 SLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 850
Query: 841 MQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPI 900
MQ+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPI
Sbjct: 851 MQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPI 910
Query: 901 SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGIND 960
SQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM T +PEIQR NL T L++KAMGIND
Sbjct: 911 SQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND 970
Query: 961 LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 1020
LLSFDFMD P + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV L
Sbjct: 971 LLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHL 1030
Query: 1021 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1080
GCS+E+LTI++M+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS
Sbjct: 1031 GCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSN 1090
Query: 1081 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKD 1140
PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+ +++KAI +GFF +AA+KD
Sbjct: 1091 PWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1150
Query: 1141 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR 1200
PQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP
Sbjct: 1151 PQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA 1210
Query: 1201 FFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1221
FFKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1211 FFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215
BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match:
A1Z9L3 (ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 SV=1)
HSP 1 Score: 1318.9 bits (3412), Expect = 0.0e+00
Identity = 736/1251 (58.83%), Postives = 915/1251 (73.14%), Query Frame = 0
Query: 10 DGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPD 69
D L+KLEYLSLVSK+C+EL+ HLG DK LAEFI ++ T D F L +NGAE PD
Sbjct: 2 DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPD 61
Query: 70 YFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGK----FRALAIGDD----RERAKD 129
V++L RII+L+ P + G +E + + KK + F LA+ +D +E + D
Sbjct: 62 SLVQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDD 121
Query: 130 LQK-----EIELEAHQKRGDREVEDDRYKGRADRGDRG------------RDRDRARDRD 189
+K E E H+K +V+ + A G RDR + R RD
Sbjct: 122 DEKVKAKPEKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRD 181
Query: 190 RRDGDRDRDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDD-DGDEDYR-RSGRQ 249
R R R R+ DR+ DR R +D+++ R RD R R R+D D D D R +S
Sbjct: 182 RDTKRRSRSRE-DRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSS 241
Query: 250 RDRNRRNGYEENESYRGDAEDGNGNWRGDRDDTQNERHWP----VNHEPELYKVYKGRVS 309
RD + R + S + D R DR +E+ P + +PE K+Y G+++
Sbjct: 242 RDHHERR--RRSRSRSTERRD-----RRDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIA 301
Query: 310 RVMDTGCFVQLNDFRGK-EGLVHVSQI-ATRRISNAKDVVKRDQEVYVKVISVSGKKLSL 369
++ GCFVQL R + EGLVH+SQ+ A R+++ +VV R+Q V VKV+S++G+K+SL
Sbjct: 302 NIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSL 361
Query: 370 SMRDVDQHSGKDLLPLKKKDVDNGPRMNPSDTKDDGPVVRT----GLSGIKIVEDDVTVP 429
SM++VDQ SGKDL PL D+ + D DGP + L G + D+
Sbjct: 362 SMKEVDQDSGKDLNPLSHAPEDD---ESLRDRNPDGPFSSSTSMLNLQGNGMEGDE--HE 421
Query: 430 SRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEP 489
SR+ + R+SSPERWE KQ+I+SGVL SE P +D+E GLL ++E E ++EIE+ E+EP
Sbjct: 422 SRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEE-TGLLPKDEDDEADIEIEIVEEEP 481
Query: 490 AFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLN 549
FL G R D+SPV+I KNP+GSL++AA +QSAL KERRE + Q+ ++++P LN
Sbjct: 482 PFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLN 541
Query: 550 RPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLP 609
+ W DPLPE R LA +RG+ + ++PEWKK GK SFG+K+ L++ EQRQSLP
Sbjct: 542 KNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLP 601
Query: 610 IYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSV 669
IYKL+ +LI+AV DNQ+L+VIGETGSGKTTQ+TQYL E G+T GKIGCTQPRRVAAMSV
Sbjct: 602 IYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSV 661
Query: 670 AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDE 729
AKRVAEE+GCRLG+EVGY IRFEDCT P+T+IKYMTDGMLLRE L++ L YSVIMLDE
Sbjct: 662 AKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDE 721
Query: 730 AHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 789
AHERTI TDVLFGLLK V++RP+L+LIVTSATLDA KFS YFF IFTIPGRTFPVE+
Sbjct: 722 AHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEV 781
Query: 790 LYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPE 849
LYTK+PETDYLDA+LITV+QIHL EP GD+LLFLTGQEEID AC+ LYERMK LG +VPE
Sbjct: 782 LYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPE 841
Query: 850 LIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 909
LIILPVYSALPSEMQ+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN
Sbjct: 842 LIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 901
Query: 910 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLG 969
K G+DSLV+TPISQA+AKQRAGRAGRTGPGK YRLYTE AYR+EM PT +PEIQR NL
Sbjct: 902 SKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLA 961
Query: 970 HTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLD 1029
T L +K MGINDLL FDFMD P ++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+
Sbjct: 962 TTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLE 1021
Query: 1030 PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLL 1089
P LSKML+ SV L CSDEILTI++M+ N+FYRP++KQA ADQK+AKF Q EGDHLTLL
Sbjct: 1022 PNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLL 1081
Query: 1090 AVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKA 1149
AVY +WK FS WC+ENFVQ R+L+R+QDVRKQLL IMD++KLDVVSAGKN +I+KA
Sbjct: 1082 AVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKA 1141
Query: 1150 ITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVT 1209
I +GFF +AA+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT
Sbjct: 1142 ICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVT 1201
Query: 1210 VIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1223
IDPKWLVE AP FF+ +DPTK+SK K+ +R+EPLY++Y EPN+WR+S+ R
Sbjct: 1202 TIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVR 1238
BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match:
Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)
HSP 1 Score: 1314.3 bits (3400), Expect = 0.0e+00
Identity = 706/1222 (57.77%), Postives = 885/1222 (72.42%), Query Frame = 0
Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
+ KLE + L S+VC+ELE +G GDK+LAEF+ + + +F+ + EN + P+
Sbjct: 1 MDKLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESL 60
Query: 72 VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
L +I EK KK + ++ AK
Sbjct: 61 SSHLFNLI-----------EKMKKKTTTTTNNNNNNN----NNNTNTAKTTTTTTTTTTT 120
Query: 132 QKRGD-REVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDR 191
+ +E E + K ++ ++ +++ + +WD+ K
Sbjct: 121 TNNNNYKESEWEETKLNSNSNNQKKNQFPGLSIPNK---------------VEWDQGKIV 180
Query: 192 DKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRG 251
D D D+ E+ +R +Q+D +R E+ E +
Sbjct: 181 DVPID-------------DEKTKEELKR--KQQDMDREFEREQRE-------------KR 240
Query: 252 DRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG-KEGLVHVSQIATRR- 311
DRD Q + ++ EP LYK+Y G+VS + D GCFV L G ++GLVH+SQI + R
Sbjct: 241 DRDREQQNKRREIDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGRT 300
Query: 312 -ISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-----KDVDNGPR 371
+++ DVVKR+Q+V VK++SV+ K+SLSM+DVDQ +G+DL P + R
Sbjct: 301 KLNHPSDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSTNNR 360
Query: 372 MNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEY 431
NP ++ S +DD + + KR++SP+RW KQLIASG+LSV E
Sbjct: 361 SNPFKPNNN----NNNSSNNNNNDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPEM 420
Query: 432 PSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAA 491
P+YD E + + EE EE+ +IE NEDEP FL+G +SP+KI K P GSL RAA
Sbjct: 421 PNYDKEVGLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAA 480
Query: 492 ALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYD-- 551
+ Q+AL KER+E + QQ+ M+DSIPKDL+ PW DP+PE GERHLAQE+R + D
Sbjct: 481 STQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTE 540
Query: 552 MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 611
+PEWKK G I +G+ + SI+EQR+SLPI+ L++ +QAV ++Q+LVVIGETGSGKT
Sbjct: 541 IPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKT 600
Query: 612 TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 671
TQ+ QYLAEAGY T GKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P+
Sbjct: 601 TQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE 660
Query: 672 TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 731
T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI TDVLFGLLKQ ++RRP+L++++
Sbjct: 661 TIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLI 720
Query: 732 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 791
TSATL+AEKFS YF N +F IPGRTFPV+I YTK PE DYLDA+LITV+QIHL+EP GD
Sbjct: 721 TSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGD 780
Query: 792 VLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 851
+LLFLTGQEEID ACQ LYERMK LG NVP+LIILPVYSALPSEMQ++IFEPAPPG RKV
Sbjct: 781 ILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKV 840
Query: 852 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 911
V+ATNIAE SLTIDGI+YVIDPGF+KQ +NPK G+DSLV+ PISQA+A+QR+GRAGRTG
Sbjct: 841 VIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTG 900
Query: 912 PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 971
PGKCYRLYTESA++NEM ++IPEIQR NLG+T LTMKAMGINDLL+FDFMDPP Q L+
Sbjct: 901 PGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLV 960
Query: 972 SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1031
SAMEQLYSLGALDEEGLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+
Sbjct: 961 SAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQ 1020
Query: 1032 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1091
N+FYRP+EKQA ADQK+AKFFQPEGDHLTLL VYE+WK FS PWCFENFVQ+RSLRRA
Sbjct: 1021 NVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRA 1080
Query: 1092 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1151
QDVRKQL++IMD+YKLD++SAG+N+T+I+KAI +GFF +A++KDP EGY+TLVE QPVYI
Sbjct: 1081 QDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYI 1140
Query: 1152 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1211
HPSS LF R PDWVIYHELVMTTKEYMREV IDPKWLVELAP+FFK +DP K+SKRKR+
Sbjct: 1141 HPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRK 1160
Query: 1212 ERIEPLYDRYHEPNSWRLSKRR 1223
E+IEPLYD+Y++PN+WR SKR+
Sbjct: 1201 EKIEPLYDKYNDPNAWRPSKRK 1160
BLAST of HG10006488 vs. ExPASy TrEMBL
Match:
A0A5A7V8X9 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001090 PE=4 SV=1)
HSP 1 Score: 2299.6 bits (5958), Expect = 0.0e+00
Identity = 1187/1231 (96.43%), Postives = 1204/1231 (97.81%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1 MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-------RDGDRDRD 180
+L+KEIELEAHQK G+R+VEDDRY+ RA GDRGRDRDR RDRDR R DRD D
Sbjct: 121 ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRDRDRDRGRDRHKDRDVD 180
Query: 181 RDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYE 240
RDRDRYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYE
Sbjct: 181 RDRDRYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYE 240
Query: 241 ENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDF 300
ENES+RGD +DGNGNWRGDR N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDF
Sbjct: 241 ENESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDF 300
Query: 301 RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPL 360
RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPL
Sbjct: 301 RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360
Query: 361 KKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
KKKD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI
Sbjct: 361 KKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
Query: 421 ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK
Sbjct: 421 ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
Query: 481 NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELR 540
NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELR
Sbjct: 481 NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540
Query: 541 GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVI
Sbjct: 541 GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVI 600
Query: 601 GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601 GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
Query: 661 FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR
Sbjct: 661 FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
Query: 721 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
Query: 781 HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781 HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
Query: 841 APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841 APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
Query: 901 AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901 AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
Query: 961 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPT 1200
VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1200
Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1225
BLAST of HG10006488 vs. ExPASy TrEMBL
Match:
A0A1S3C2I4 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo OX=3656 GN=LOC103495726 PE=4 SV=1)
HSP 1 Score: 2295.8 bits (5948), Expect = 0.0e+00
Identity = 1186/1229 (96.50%), Postives = 1203/1229 (97.88%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1 MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-----RDGDRDRDRD 180
+L+KEIELEAHQK G+R+VEDDRY+ RA GDRGRDRDR RDR R RD DRDRDR
Sbjct: 121 ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRGRDRHKDRDVDRDRDRY 180
Query: 181 RDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEEN 240
RDR RDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYEEN
Sbjct: 181 RDRDRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYEEN 240
Query: 241 ESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG 300
ES+RGD +DGNGNWRGDR N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDFRG
Sbjct: 241 ESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRG 300
Query: 301 KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK 360
KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKK
Sbjct: 301 KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK 360
Query: 361 KDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
KD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS
Sbjct: 361 KDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
Query: 421 GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP
Sbjct: 421 GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
Query: 481 EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGV 540
EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGV
Sbjct: 481 EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540
Query: 541 GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 600
GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGE
Sbjct: 541 GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGE 600
Query: 601 TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE
Sbjct: 601 TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
Query: 661 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP
Sbjct: 661 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
Query: 721 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL
Sbjct: 721 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
Query: 781 TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP
Sbjct: 781 TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
Query: 841 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG
Sbjct: 841 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
Query: 901 RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP
Sbjct: 901 RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
Query: 961 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII
Sbjct: 961 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
Query: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS
Sbjct: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
Query: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE
Sbjct: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
Query: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKM 1200
NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKM
Sbjct: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKM 1200
Query: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
SKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223
BLAST of HG10006488 vs. ExPASy TrEMBL
Match:
A0A6J1KEH4 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita maxima OX=3661 GN=LOC111493616 PE=4 SV=1)
HSP 1 Score: 2290.4 bits (5934), Expect = 0.0e+00
Identity = 1179/1233 (95.62%), Postives = 1202/1233 (97.49%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1 MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR---RDG------DRD 180
+L KEIELEAHQKRGDR+V+DDRYKGRA GDRGRDRDR RDRDR RDG DRD
Sbjct: 121 ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDRDGDRNRNRDRD 180
Query: 181 RDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGY 240
RDRDRD YRDRDWDRDKDRD+ RDRYERDERHGGRDR DDG +DY+RSGR RDRN+RNGY
Sbjct: 181 RDRDRDGYRDRDWDRDKDRDRRRDRYERDERHGGRDRGDDGGDDYQRSGRPRDRNKRNGY 240
Query: 241 EENESYRGDAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLN 300
EENE Y GDA DGNGNWR DRD TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+N
Sbjct: 241 EENEGYTGDARDGNGNWRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQIN 300
Query: 301 DFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLL 360
DFRGKEGLVHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLL
Sbjct: 301 DFRGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLL 360
Query: 361 PLKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQ 420
PLKKKD D+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQ
Sbjct: 361 PLKKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQ 420
Query: 421 LIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKI 480
LIASGVLSV++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKI
Sbjct: 421 LIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKI 480
Query: 481 FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQE 540
FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQE
Sbjct: 481 FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQE 540
Query: 541 LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 600
LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV
Sbjct: 541 LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 600
Query: 601 VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660
VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA
Sbjct: 601 VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660
Query: 661 IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLV 720
IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLV
Sbjct: 661 IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLV 720
Query: 721 KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780
KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL
Sbjct: 721 KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780
Query: 781 QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840
QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF
Sbjct: 781 QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840
Query: 841 EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900
EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK
Sbjct: 841 EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900
Query: 901 QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 960
QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF
Sbjct: 901 QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 960
Query: 961 MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020
MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI
Sbjct: 961 MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020
Query: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080
LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN
Sbjct: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080
Query: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140
FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR
Sbjct: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140
Query: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1200
TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVAD
Sbjct: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD 1200
Query: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1231
BLAST of HG10006488 vs. ExPASy TrEMBL
Match:
A0A0A0LG89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1)
HSP 1 Score: 2285.0 bits (5920), Expect = 0.0e+00
Identity = 1180/1225 (96.33%), Postives = 1199/1225 (97.88%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
M ASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1 MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDG KGKFRALAIGDDRERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDG-KGKFRALAIGDDRERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
+L+KEIELEAHQK G+R+VEDDRY+ RA GDRGR RDR RDR R R DRD DRDRDRY
Sbjct: 121 ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRGRDRDRDRGRDRHRDRDVDRDRDRY 180
Query: 181 RDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEENESYR 240
RDRDWDRDKDRD+ RDRY+RDERHGGRDRDDD GD+D+RRSGRQRDRNRRNGYEENES+R
Sbjct: 181 RDRDWDRDKDRDRRRDRYDRDERHGGRDRDDDGGDDDHRRSGRQRDRNRRNGYEENESHR 240
Query: 241 GDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
GD EDGNGNWRGDR N RH PVNHEPELY VYKGRVSRVMDTGCFVQLNDFRGKEGL
Sbjct: 241 GDVEDGNGNWRGDR----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
Query: 301 VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
VHVSQIATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301 VHVSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360
Query: 361 NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361 DGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
Query: 421 VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421 VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
Query: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540
Query: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSG
Sbjct: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 600
Query: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
Query: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
Query: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
Query: 781 GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781 GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
Query: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
Query: 901 TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901 TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
Query: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1200
Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1218
BLAST of HG10006488 vs. ExPASy TrEMBL
Match:
A0A6J1G313 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita moschata OX=3662 GN=LOC111450338 PE=4 SV=1)
HSP 1 Score: 2280.4 bits (5908), Expect = 0.0e+00
Identity = 1174/1225 (95.84%), Postives = 1198/1225 (97.80%), Query Frame = 0
Query: 1 MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1 MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
Query: 61 KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61 KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
Query: 121 DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
+L KEIELEAHQKRGDR+V+DDRYKGRA GDRGRDRDR RDRDR RDGDR+RDRDRDRY
Sbjct: 121 ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDGDRNRDRDRDRY 180
Query: 181 RDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRG 240
R DRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE Y G
Sbjct: 181 R----DRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGYTG 240
Query: 241 DAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
D DGNGN R DRD TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKEGL
Sbjct: 241 DTRDGNGNRRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGL 300
Query: 301 VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
VHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301 VHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360
Query: 361 NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361 DGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLS 420
Query: 421 VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
V++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421 VNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 480
Query: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481 SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540
Query: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG
Sbjct: 541 YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
Query: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601 KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
Query: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
PDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661 PDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
Query: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
Query: 781 GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
GD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781 GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
Query: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
Query: 901 TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901 TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
Query: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961 LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1200
Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1219
BLAST of HG10006488 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 1880.1 bits (4869), Expect = 0.0e+00
Identity = 988/1213 (81.45%), Postives = 1066/1213 (87.88%), Query Frame = 0
Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
L KL +LSLVS VC+ELETHLG +KVLAEFI ++GR ETVDEFD LKE GAEMPDYF
Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65
Query: 72 VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
VRSLL IH I PP+ K KK++E D + KF+ LAI D +++ K+L+KEIE EA
Sbjct: 66 VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDKVKELEKEIEREAE 125
Query: 132 QKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDRD 191
++R R+ DR RDRDRR+ RDRDRDR+R DRD RD
Sbjct: 126 ERR--------------------REEDRNRDRDRRESGRDRDRDRNR------DRDDRRD 185
Query: 192 KHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRGD 251
+HRDR R+R D+ ED R R R+R R +G G+ ED + R
Sbjct: 186 RHRDR--------ERNRGDEEGEDRRSDRRHRERGRGDG--------GEGEDRRRDRRA- 245
Query: 252 RDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISN 311
+D+ E N EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQ+ATRR+
Sbjct: 246 KDEYVEEDKGGAN-EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDK 305
Query: 312 AKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-KDVDNGPRMNPSDTKD 371
AK+ VKRD EVYVKVIS+S K SLSMRDVDQ++G+DL+PL+K D D+ R NPS
Sbjct: 306 AKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTK 365
Query: 372 DGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGD 431
DG V +TG+SGI+IVE++ PSRRPLK+MSSPERWEAKQLIASGVL V E+P YD++GD
Sbjct: 366 DGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGD 425
Query: 432 GLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIK 491
G+LYQEEGAEEELEIE+NEDEPAFLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL K
Sbjct: 426 GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTK 485
Query: 492 ERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAYG 551
ERRE+REQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAYDMPEWKKDA+G
Sbjct: 486 ERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFG 545
Query: 552 KDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 611
K +FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA
Sbjct: 546 KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 605
Query: 612 GYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 671
GYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM
Sbjct: 606 GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 665
Query: 672 LLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 731
LLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKF
Sbjct: 666 LLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF 725
Query: 732 SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEE 791
SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEE
Sbjct: 726 SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEE 785
Query: 792 IDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEAS 851
ID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEAS
Sbjct: 786 IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEAS 845
Query: 852 LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 911
LTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTE
Sbjct: 846 LTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 905
Query: 912 SAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 971
SAYRNEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLG
Sbjct: 906 SAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLG 965
Query: 972 ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 1031
ALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQ
Sbjct: 966 ALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQ 1025
Query: 1032 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1091
AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSI
Sbjct: 1026 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSI 1085
Query: 1092 MDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1151
MDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQ
Sbjct: 1086 MDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1145
Query: 1152 PDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRY 1211
PDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRY
Sbjct: 1146 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRY 1168
Query: 1212 HEPNSWRLSKRRA 1224
HEPNSWRLSKRRA
Sbjct: 1206 HEPNSWRLSKRRA 1168
BLAST of HG10006488 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 778.5 bits (2009), Expect = 8.0e-225
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 0
Query: 547 DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 606
DA K +K+ L +QE R+SLPIY + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439
Query: 607 YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 666
YL EAGYT GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 440 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499
Query: 667 MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATL 726
MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559
Query: 727 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 786
DAEKFS YF IF+ PGR +PVEI YT PE DY+DAA++T+L IH+ EP GD+L+F
Sbjct: 560 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619
Query: 787 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 846
TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 847 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 906
IAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739
Query: 907 RLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 966
RLYT Y N++ T+PE+QR NL L +K++GI+DL++FDFMDPP +AL+ ++E
Sbjct: 740 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799
Query: 967 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1026
L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G+IFY
Sbjct: 800 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859
Query: 1027 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1086
RP++KQ AD R F GDH+ LL VY +WK NFS WC+EN++Q RS++RA+D+
Sbjct: 860 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919
Query: 1087 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1146
R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+
Sbjct: 920 RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979
Query: 1147 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
S L Q P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D + +K
Sbjct: 980 SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034
BLAST of HG10006488 vs. TAIR 10
Match:
AT1G32490.2 (RNA helicase family protein )
HSP 1 Score: 778.5 bits (2009), Expect = 8.0e-225
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 0
Query: 547 DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 606
DA K +K+ L +QE R+SLPIY + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 370 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 429
Query: 607 YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 666
YL EAGYT GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 430 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 489
Query: 667 MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATL 726
MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 490 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 549
Query: 727 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 786
DAEKFS YF IF+ PGR +PVEI YT PE DY+DAA++T+L IH+ EP GD+L+F
Sbjct: 550 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 609
Query: 787 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 846
TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 610 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 669
Query: 847 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 906
IAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 670 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 729
Query: 907 RLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 966
RLYT Y N++ T+PE+QR NL L +K++GI+DL++FDFMDPP +AL+ ++E
Sbjct: 730 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 789
Query: 967 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1026
L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G+IFY
Sbjct: 790 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 849
Query: 1027 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1086
RP++KQ AD R F GDH+ LL VY +WK NFS WC+EN++Q RS++RA+D+
Sbjct: 850 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 909
Query: 1087 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1146
R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+
Sbjct: 910 RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 969
Query: 1147 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
S L Q P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D + +K
Sbjct: 970 SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1024
BLAST of HG10006488 vs. TAIR 10
Match:
AT2G35340.1 (helicase domain-containing protein )
HSP 1 Score: 761.5 bits (1965), Expect = 1.0e-219
Identity = 363/647 (56.11%), Postives = 489/647 (75.58%), Query Frame = 0
Query: 554 SFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 613
S G+ + +QE R++LPIY + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT
Sbjct: 388 SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447
Query: 614 TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 673
GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT T++KYMTDGMLLR
Sbjct: 448 KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507
Query: 674 EILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 733
E+L + +L YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +
Sbjct: 508 ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567
Query: 734 FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDF 793
F IF PGR +PV+I +T PE DY+DAA+ TVL IH+ EP GDVL+FL GQEEI+
Sbjct: 568 FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627
Query: 794 ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 853
++L +++GLG + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTI
Sbjct: 628 VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687
Query: 854 DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 913
DGI YV+DPGF+K YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT Y
Sbjct: 688 DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747
Query: 914 RNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 973
N++ T+PEIQR NL L++K++GI++LL+FDFMDPP +ALI ++E L++LGAL+
Sbjct: 748 YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807
Query: 974 EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQ 1033
+ G LTK GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G +IFYRP++KQ
Sbjct: 808 QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 867
Query: 1034 ADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1093
AD F GDH+ L +Y +WK N+S WC+EN++Q RS++RA+D+R QL ++
Sbjct: 868 ADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 927
Query: 1094 DKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1153
++ ++DV S IRK+I AGFF H A+ YRT+ Q V+IHP+S L Q P
Sbjct: 928 ERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP 987
Query: 1154 DWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
WV+YH+LV+T+KEYMR+VT + P+WL+E+AP ++++ D + +K
Sbjct: 988 RWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034
BLAST of HG10006488 vs. TAIR 10
Match:
AT5G13010.1 (RNA helicase family protein )
HSP 1 Score: 715.7 bits (1846), Expect = 6.4e-206
Identity = 459/1105 (41.54%), Postives = 658/1105 (59.55%), Query Frame = 0
Query: 149 DRGDRGRDRDRARDRDRRDGDRDRDR----DRDRYRDRDWDRDKDRDKH---RDRYERDE 208
+RG R R+ R RDR + R R R + D YR R+ R DRD H R RY D
Sbjct: 138 ERGGSNRHREEHR-RDRSETPRSRQRNTYDEMDHYRRRESYRQSDRDYHGEKRRRYNSDW 197
Query: 209 RHGGRDRDDDGDEDYRRS---GRQRDRNRRNGYEENESYRGDAEDGN--GNWRG-DRDDT 268
R GR DDG +++ RS R +RR + + D W R
Sbjct: 198 RTPGRSDWDDGQDEWERSPHGDRGSSYSRRPQPSPSPMLAAASPDARLASPWLDTPRSTM 257
Query: 269 QNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFR-GKEGLV----HVSQIATRRIS 328
+ W + + G R + + N +EG + H + ++
Sbjct: 258 SSASPWDMGAPSPIPIRASGSSIRSSSSRYGGRSNQLAYSREGDLTNEGHSDEDRSQGAE 317
Query: 329 NAKDVVKRDQEVYVKVISVSG---KKLSLSMRDVDQHSG--KDLLPLKKKDVDNGPRMNP 388
K + V ++ S S+ D D S D L+KK+ + R+
Sbjct: 318 EFKHEITETMRVEMEYQSDRAWYDTDEGNSLFDADSASFFLGDDASLQKKETELAKRL-- 377
Query: 389 SDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSY 448
VR S + + + S++ + + +WE +QL+ SG + +E +
Sbjct: 378 ---------VRRDGSKMSLAQ------SKKYSQLNADNAQWEDRQLLRSGAVRGTEVQTE 437
Query: 449 DDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQ 508
D + E + + +++ +P FL G+ Y+ PV K+P ++ +
Sbjct: 438 FDSEE---------ERKAILLVHDTKPPFLDGRVVYTKQAEPVMPVKDPTSDMAIISRKG 497
Query: 509 SALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMP--- 568
S L+K E+RE+Q S K R WE G + G+ SA +
Sbjct: 498 SGLVK---EIREKQ------SANKSRQRFWELAGSNLG------NILGIEKSAEQIDADT 557
Query: 569 ---------EWKKDA-------YGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDN 628
++K +A G+ +S SK ++ EQRQ LPI+ ++ EL+Q + +N
Sbjct: 558 AVVGDDGEVDFKGEAKFAQHMKKGEAVSEFAMSK-TMAEQRQYLPIFSVRDELLQVIREN 617
Query: 629 QVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEE 688
QV+VV+GETGSGKTTQ+TQYL E GYT +G +GCTQPRRVAAMSVAKRV+EE LG++
Sbjct: 618 QVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDK 677
Query: 689 VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLL 748
+GYAIRFED TGP+TVIKYMTDG+LLRE L D +L +Y V+++DEAHER++ TDVLFG+L
Sbjct: 678 IGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGIL 737
Query: 749 KQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAAL 808
K++V RR D +LIVTSATL+A+KFS +F + IF IPGRTFPV ILY+K P DY++AA+
Sbjct: 738 KKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNILYSKTPCEDYVEAAV 797
Query: 809 ITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGL----GKNVPELIILPVYSALP 868
+ IH+T P GD+L+F+TGQ+EI+ AC SL ERM+ L + + L+ILP+YS LP
Sbjct: 798 KQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLP 857
Query: 869 SEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 928
+++Q++IF+ G RK +VATNIAE SLT+DGI+YVID G+ K V+NP+ G+D+L +
Sbjct: 858 ADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVF 917
Query: 929 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGI 988
PIS+A++ QRAGRAGRTGPG CYRLYTESAY NEM P+ +PEIQR NLG+ L +K++ I
Sbjct: 918 PISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKI 977
Query: 989 NDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASV 1048
++LL FDFMDPP + ++++M QL+ LGAL+ G LT LG KM EFPLDPPL+KMLL
Sbjct: 978 DNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGE 1037
Query: 1049 DLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNF 1108
L C DE+LTI++M+ ++F+RP+E+ ++D R KFF PE DHLTLL VY+ WK ++
Sbjct: 1038 RLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDY 1097
Query: 1109 SGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAAR 1168
G WC ++++Q + LR+A++VR QLL I+ + K+++ S G ++ +RKAI + +F ++AR
Sbjct: 1098 RGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPDWDIVRKAICSAYFHNSAR 1157
Query: 1169 KDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVE 1205
Y P ++HPSSAL+ PD+V+YHEL++TTKEYM+ T ++P WL E
Sbjct: 1158 LKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAE 1199
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038890443.1 | 0.0e+00 | 97.63 | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hi... | [more] |
KAA0063640.1 | 0.0e+00 | 96.43 | putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo... | [more] |
XP_023521965.1 | 0.0e+00 | 96.24 | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pe... | [more] |
XP_008455589.1 | 0.0e+00 | 96.50 | PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [C... | [more] |
KAG6599282.1 | 0.0e+00 | 96.01 | ATP-dependent RNA helicase dhx8, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q38953 | 0.0e+00 | 81.45 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi... | [more] |
A2A4P0 | 0.0e+00 | 60.16 | ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1 | [more] |
Q14562 | 0.0e+00 | 59.14 | ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1 | [more] |
A1Z9L3 | 0.0e+00 | 58.83 | ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 S... | [more] |
Q54F05 | 0.0e+00 | 57.77 | ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V8X9 | 0.0e+00 | 96.43 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me... | [more] |
A0A1S3C2I4 | 0.0e+00 | 96.50 | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me... | [more] |
A0A6J1KEH4 | 0.0e+00 | 95.62 | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita ... | [more] |
A0A0A0LG89 | 0.0e+00 | 96.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1 | [more] |
A0A6J1G313 | 0.0e+00 | 95.84 | probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita ... | [more] |