HG10006488 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006488
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent RNA helicase, putative
Location	Chr07: 19125465 .. 19130092 (-)
RNA-Seq Expression	HG10006488
Synteny	HG10006488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTTCCATGGCTGACGGCGATGATGGATTGAAGAAGCTCGAGTACTTATCCCTCGTCTCCAAGGTATGTTCCGAGCTCGAAACTCATTTAGGGTTTGGAGATAAAGTCCTTGCTGAGTTCATAACCGAGATGGGCCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGTGCCGAGATGCCCGATTACTTTGTTCGGTCCCTCCTGAGGATCATTCACCTGATTCTTCCTCCGCAGAAGGGTGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGGAAGAAGGGCAAGTTTCGGGCATTGGCTATCGGCGATGATAGGGAGAGAGCTAAGGACCTTCAGAAGGAGATTGAATTGGAGGCTCACCAGAAGCGTGGGGACAGAGAGGTAGAAGATGATCGATACAAGGGGAGGGCGGACAGAGGGGACAGAGGAAGAGATAGAGATAGAGCTAGAGATAGGGATAGAAGAGACGGGGACAGAGACAGAGATAGAGATAGAGATAGATACCGGGATCGGGATTGGGATCGAGATAAGGATAGAGATAAGCACAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGCGATGAAGATTATCGGAGAAGTGGAAGGCAAAGGGATAGAAATAGGAGAAATGGGTATGAAGAAAATGAGAGTTACAGGGGGGATGCAGAAGATGGTAATGGGAATTGGAGAGGTGACAGGGATGACACACAAAATGAGCGACACTGGCCTGTCAATCATGAACCTGAATTATACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAATGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCTACTCGAAGAATTAGCAATGCCAAGGATGTTGTAAAGCGGGATCAAGAGGTCTATGTCAAGGTCATTTCAGTTTCAGGGAAAAAGTTGAGCCTTTCTATGAGGGATGTGGATCAGCATTCTGGTAAGGATTTGCTTCCGTTAAAGAAAAAAGATGTTGATAATGGTCCTAGAATGAATCCTTCAGATACAAAGGATGATGGTCCGGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGGCCTTTGAAGAGAATGAGTTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCCTCTGGGGTTTTAAGTGTAAGCGAATATCCCTCTTATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAAGAGCTTGAGATTGAGTTAAATGAAGATGAGCCTGCATTTCTGCAAGGTCAGAGCAGATACTCAATTGACATGTCACCAGTGAAGATCTTCAAAAATCCAGAAGGGTCTTTGAGTCGGGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTCGATTCGATTCCAAAGGATCTTAATCGACCTTGGGAAGATCCTTTGCCAGAGACTGGTGAGAGGCATCTTGCACAGGAGCTTAGGGGCGTTGGCTTGTCAGCCTATGACATGCCTGAATGGAAGAAGGATGCCTATGGAAAAGATATTAGTTTTGGGCAAAAGTCGAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTAAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAAGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAAGTAACTCAGTATCTTGCTGAAGCTGGATACACAACATCTGGTAAAATTGGGTGTACTCAACCGCGTAGGGTGGCTGCAATGTCTGTCGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGTTTAGGAGAGGAAGTTGGATATGCAATTCGTTTTGAGGACTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCTCAGTACTCGGTAATTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGATTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCCGTGGAGATCCTCTATACTAAGCAACCAGAAACTGATTATCTAGATGCTGCATTAATCACTGTCTTGCAGATCCACTTAACAGAACCTGAAGGTGACGTCCTTCTATTCTTGACTGGTCAGGAGGAGATCGATTTTGCATGTCAGTCTCTATATGAGAGAATGAAAGGACTCGGTAAAAATGTTCCTGAGTTAATTATTCTACCAGTCTATAGTGCCTTGCCCAGTGAAATGCAATCCAGGATTTTTGAACCTGCCCCTCCTGGTAAGAGGAAAGTTGTAGTGGCAACTAACATTGCTGAGGCTTCATTGACGATAGATGGAATCTTTTATGTTATCGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGACTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAACGTGCAGGGCGTGCTGGCCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACAACAATACCAGAGATCCAGAGAATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAGGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCTGAATTTCCTTTAGATCCACCTTTGTCAAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCAAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAATTTTTCAGGCCCTTGGTGTTTTGAGAACTTTGTTCAGTCTCGATCCTTGAGGAGAGCGCAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTATGATCTTCTAGTATCCTCTTAGTATTATATTTGTTTTCAATTATGGACAAGTATGATCTTCTAGTATAGTATCCTCTTAGTATTATCTTTGTTAAATTATTGTCTTCAGTTGCGGTTGCTATTGTTGTCCCTACGTACCTCTATTCTTTTTTTTTTTAAAAAAAAAACAGTTAACATATTTGGAGTGGATATGGTTGCTCTATGGTGGAGGTGGTGCTTTTAGGAGGAGGACAAAGTTTAGTGGCATAGTAGTTTCTTTATTGTTTTGTGGAGAATTTGGCTTAACAAGATCTTTAGAGAGGTGGAGAGATCGTGTATGTGGGGAGGTTTAGAAGGTTGTTAGGTTTAATGTTTTCATTGTGAGCATTGTTTTCACGATCTTTTTGTGAATATGAGCTTGGTCCTATTTATTAGATTAGAGTTCTTTTCGGTAGTTTAGGTTTGGACCCCCTTCAGTTGGCCTTTTACTGCATTCCTTCATTTCTCAAAAGCTTGGTTCCTAAAAAAGGAAAGAAAAAACAGATAGTTGACATGTAGGAATGGAATTTAGTACAATTATGTTTTCTCTTAAAAGAATCGGGCTGAACTAGACTTAGGCATCATCATGTTAAAAAATTTAGAAAATGTAACTGAATGAATTTTCGTTGAGATGCACAATTATGTATGTGGTAGCAACTGACTATACTTCTGTCCATTGGGGGCTTGTGAAATCAACTTCTAAGATTCTTCGCTTCATCTTGTACTTAGAGTCGAGACACCAGTAGAGGGAAATTCTGTATCTTGGATTCTAGGAAATTTTTAGCTAGCGTTTTAATTTTCTCTACTACTCTTTGATCAGTTTTGCTCATCAATCATCATTAGATCTTACTACTATTGATCTCTTGTATGTTAACATCTTACTGTTCCTATGAATCTCCTCGCTTTCTAACTCACGCACGTTTGCTTAATTTTAGGTACAAATTGGATGTGGTGAGTGCTGGCAAGAACTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCATGCAGCCAGAAAGGATCCACAAGAGGGTTATCGGACCCTAGTCGAGAACCAACCGGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTGGTCATGACAACAAAAGAATACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAATTAGCTCCAAGATTCTTCAAAGTTGCAGACCCTACGAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTATGACAGATATCACGAACCAAACTCTTGGCGTTTGAGTAAGAGACGAGCTTAA

mRNA sequence

ATGGTTGCTTCCATGGCTGACGGCGATGATGGATTGAAGAAGCTCGAGTACTTATCCCTCGTCTCCAAGGTATGTTCCGAGCTCGAAACTCATTTAGGGTTTGGAGATAAAGTCCTTGCTGAGTTCATAACCGAGATGGGCCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGTGCCGAGATGCCCGATTACTTTGTTCGGTCCCTCCTGAGGATCATTCACCTGATTCTTCCTCCGCAGAAGGGTGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGGAAGAAGGGCAAGTTTCGGGCATTGGCTATCGGCGATGATAGGGAGAGAGCTAAGGACCTTCAGAAGGAGATTGAATTGGAGGCTCACCAGAAGCGTGGGGACAGAGAGGTAGAAGATGATCGATACAAGGGGAGGGCGGACAGAGGGGACAGAGGAAGAGATAGAGATAGAGCTAGAGATAGGGATAGAAGAGACGGGGACAGAGACAGAGATAGAGATAGAGATAGATACCGGGATCGGGATTGGGATCGAGATAAGGATAGAGATAAGCACAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGCGATGAAGATTATCGGAGAAGTGGAAGGCAAAGGGATAGAAATAGGAGAAATGGGTATGAAGAAAATGAGAGTTACAGGGGGGATGCAGAAGATGGTAATGGGAATTGGAGAGGTGACAGGGATGACACACAAAATGAGCGACACTGGCCTGTCAATCATGAACCTGAATTATACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAATGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCTACTCGAAGAATTAGCAATGCCAAGGATGTTGTAAAGCGGGATCAAGAGGTCTATGTCAAGGTCATTTCAGTTTCAGGGAAAAAGTTGAGCCTTTCTATGAGGGATGTGGATCAGCATTCTGGTAAGGATTTGCTTCCGTTAAAGAAAAAAGATGTTGATAATGGTCCTAGAATGAATCCTTCAGATACAAAGGATGATGGTCCGGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGGCCTTTGAAGAGAATGAGTTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCCTCTGGGGTTTTAAGTGTAAGCGAATATCCCTCTTATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAAGAGCTTGAGATTGAGTTAAATGAAGATGAGCCTGCATTTCTGCAAGGTCAGAGCAGATACTCAATTGACATGTCACCAGTGAAGATCTTCAAAAATCCAGAAGGGTCTTTGAGTCGGGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTCGATTCGATTCCAAAGGATCTTAATCGACCTTGGGAAGATCCTTTGCCAGAGACTGGTGAGAGGCATCTTGCACAGGAGCTTAGGGGCGTTGGCTTGTCAGCCTATGACATGCCTGAATGGAAGAAGGATGCCTATGGAAAAGATATTAGTTTTGGGCAAAAGTCGAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTAAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAAGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAAGTAACTCAGTATCTTGCTGAAGCTGGATACACAACATCTGGTAAAATTGGGTGTACTCAACCGCGTAGGGTGGCTGCAATGTCTGTCGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGTTTAGGAGAGGAAGTTGGATATGCAATTCGTTTTGAGGACTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCTCAGTACTCGGTAATTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGATTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCCGTGGAGATCCTCTATACTAAGCAACCAGAAACTGATTATCTAGATGCTGCATTAATCACTGTCTTGCAGATCCACTTAACAGAACCTGAAGGTGACGTCCTTCTATTCTTGACTGGTCAGGAGGAGATCGATTTTGCATGTCAGTCTCTATATGAGAGAATGAAAGGACTCGGTAAAAATGTTCCTGAGTTAATTATTCTACCAGTCTATAGTGCCTTGCCCAGTGAAATGCAATCCAGGATTTTTGAACCTGCCCCTCCTGGTAAGAGGAAAGTTGTAGTGGCAACTAACATTGCTGAGGCTTCATTGACGATAGATGGAATCTTTTATGTTATCGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGACTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAACGTGCAGGGCGTGCTGGCCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACAACAATACCAGAGATCCAGAGAATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAGGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCTGAATTTCCTTTAGATCCACCTTTGTCAAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCAAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAATTTTTCAGGCCCTTGGTGTTTTGAGAACTTTGTTCAGTCTCGATCCTTGAGGAGAGCGCAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTACAAATTGGATGTGGTGAGTGCTGGCAAGAACTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCATGCAGCCAGAAAGGATCCACAAGAGGGTTATCGGACCCTAGTCGAGAACCAACCGGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTGGTCATGACAACAAAAGAATACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAATTAGCTCCAAGATTCTTCAAAGTTGCAGACCCTACGAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTATGACAGATATCACGAACCAAACTCTTGGCGTTTGAGTAAGAGACGAGCTTAA

Coding sequence (CDS)

ATGGTTGCTTCCATGGCTGACGGCGATGATGGATTGAAGAAGCTCGAGTACTTATCCCTCGTCTCCAAGGTATGTTCCGAGCTCGAAACTCATTTAGGGTTTGGAGATAAAGTCCTTGCTGAGTTCATAACCGAGATGGGCCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGTGCCGAGATGCCCGATTACTTTGTTCGGTCCCTCCTGAGGATCATTCACCTGATTCTTCCTCCGCAGAAGGGTGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGGAAGAAGGGCAAGTTTCGGGCATTGGCTATCGGCGATGATAGGGAGAGAGCTAAGGACCTTCAGAAGGAGATTGAATTGGAGGCTCACCAGAAGCGTGGGGACAGAGAGGTAGAAGATGATCGATACAAGGGGAGGGCGGACAGAGGGGACAGAGGAAGAGATAGAGATAGAGCTAGAGATAGGGATAGAAGAGACGGGGACAGAGACAGAGATAGAGATAGAGATAGATACCGGGATCGGGATTGGGATCGAGATAAGGATAGAGATAAGCACAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGCGATGAAGATTATCGGAGAAGTGGAAGGCAAAGGGATAGAAATAGGAGAAATGGGTATGAAGAAAATGAGAGTTACAGGGGGGATGCAGAAGATGGTAATGGGAATTGGAGAGGTGACAGGGATGACACACAAAATGAGCGACACTGGCCTGTCAATCATGAACCTGAATTATACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAATGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCTACTCGAAGAATTAGCAATGCCAAGGATGTTGTAAAGCGGGATCAAGAGGTCTATGTCAAGGTCATTTCAGTTTCAGGGAAAAAGTTGAGCCTTTCTATGAGGGATGTGGATCAGCATTCTGGTAAGGATTTGCTTCCGTTAAAGAAAAAAGATGTTGATAATGGTCCTAGAATGAATCCTTCAGATACAAAGGATGATGGTCCGGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGGCCTTTGAAGAGAATGAGTTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCCTCTGGGGTTTTAAGTGTAAGCGAATATCCCTCTTATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAAGAGCTTGAGATTGAGTTAAATGAAGATGAGCCTGCATTTCTGCAAGGTCAGAGCAGATACTCAATTGACATGTCACCAGTGAAGATCTTCAAAAATCCAGAAGGGTCTTTGAGTCGGGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTCGATTCGATTCCAAAGGATCTTAATCGACCTTGGGAAGATCCTTTGCCAGAGACTGGTGAGAGGCATCTTGCACAGGAGCTTAGGGGCGTTGGCTTGTCAGCCTATGACATGCCTGAATGGAAGAAGGATGCCTATGGAAAAGATATTAGTTTTGGGCAAAAGTCGAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTAAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAAGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAAGTAACTCAGTATCTTGCTGAAGCTGGATACACAACATCTGGTAAAATTGGGTGTACTCAACCGCGTAGGGTGGCTGCAATGTCTGTCGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGTTTAGGAGAGGAAGTTGGATATGCAATTCGTTTTGAGGACTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCTCAGTACTCGGTAATTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGATTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCCGTGGAGATCCTCTATACTAAGCAACCAGAAACTGATTATCTAGATGCTGCATTAATCACTGTCTTGCAGATCCACTTAACAGAACCTGAAGGTGACGTCCTTCTATTCTTGACTGGTCAGGAGGAGATCGATTTTGCATGTCAGTCTCTATATGAGAGAATGAAAGGACTCGGTAAAAATGTTCCTGAGTTAATTATTCTACCAGTCTATAGTGCCTTGCCCAGTGAAATGCAATCCAGGATTTTTGAACCTGCCCCTCCTGGTAAGAGGAAAGTTGTAGTGGCAACTAACATTGCTGAGGCTTCATTGACGATAGATGGAATCTTTTATGTTATCGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGACTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAACGTGCAGGGCGTGCTGGCCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACAACAATACCAGAGATCCAGAGAATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAGGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCTGAATTTCCTTTAGATCCACCTTTGTCAAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCAAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAATTTTTCAGGCCCTTGGTGTTTTGAGAACTTTGTTCAGTCTCGATCCTTGAGGAGAGCGCAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTACAAATTGGATGTGGTGAGTGCTGGCAAGAACTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCATGCAGCCAGAAAGGATCCACAAGAGGGTTATCGGACCCTAGTCGAGAACCAACCGGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTGGTCATGACAACAAAAGAATACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAATTAGCTCCAAGATTCTTCAAAGTTGCAGACCCTACGAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTATGACAGATATCACGAACCAAACTCTTGGCGTTTGAGTAAGAGACGAGCTTAA

Protein sequence

MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA

Homology

[Close]

BLAST of HG10006488 vs. NCBI nr
Match: XP_038890443.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hispida] >XP_038890444.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hispida])

HSP 1 Score: 2331.2 bits (6040), Expect = 0.0e+00
Identity = 1195/1224 (97.63%), Postives = 1211/1224 (98.94%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVAS+A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASIANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGDN+KE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNDKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYR 180
            +L+KEIELEAHQKRGDREVE DRYKGRA    R RDRDR RDRDRRDGDRDRDRDRDRYR
Sbjct: 121  ELEKEIELEAHQKRGDREVEGDRYKGRAGDRGRDRDRDRGRDRDRRDGDRDRDRDRDRYR 180

Query: 181  DRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGD 240
            DRDWDRDKDRD+HRDR ERDERHGGRDRDDDGD+DYRRSGRQRDRNRRNGYEEN+SYRGD
Sbjct: 181  DRDWDRDKDRDRHRDRCERDERHGGRDRDDDGDDDYRRSGRQRDRNRRNGYEENKSYRGD 240

Query: 241  AEDGNGNWRGDRDD-TQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV 300
            AEDGNGNWRGDRD+ TQN RH P++HEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV
Sbjct: 241  AEDGNGNWRGDRDNLTQNGRHRPIDHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLV 300

Query: 301  HVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVDN 360
            HVSQIATRRISNAKDVVKRDQEV+VKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D+
Sbjct: 301  HVSQIATRRISNAKDVVKRDQEVFVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADD 360

Query: 361  GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV 420
            GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV
Sbjct: 361  GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSV 420

Query: 421  SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS 480
            SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS
Sbjct: 421  SEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS 480

Query: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAY 540
            RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAY
Sbjct: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540

Query: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600
            DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK
Sbjct: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600

Query: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660
            TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660

Query: 661  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720
            DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI
Sbjct: 661  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720

Query: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780
            VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780

Query: 781  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840
            D+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK
Sbjct: 781  DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840

Query: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900
            VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT
Sbjct: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900

Query: 901  GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960
            GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL
Sbjct: 901  GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960

Query: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020
            ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT
Sbjct: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020

Query: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080
            GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR
Sbjct: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080

Query: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140
            AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY
Sbjct: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140

Query: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1200
            IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1200

Query: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1224
            QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1224

[Close]

BLAST of HG10006488 vs. NCBI nr
Match: KAA0063640.1 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo var. makuwa] >TYK18386.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo var. makuwa])

HSP 1 Score: 2299.6 bits (5958), Expect = 0.0e+00
Identity = 1187/1231 (96.43%), Postives = 1204/1231 (97.81%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-------RDGDRDRD 180
            +L+KEIELEAHQK G+R+VEDDRY+ RA  GDRGRDRDR RDRDR       R  DRD D
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRDRDRDRGRDRHKDRDVD 180

Query: 181  RDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYE 240
            RDRDRYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYE
Sbjct: 181  RDRDRYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYE 240

Query: 241  ENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDF 300
            ENES+RGD +DGNGNWRGDR    N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDF
Sbjct: 241  ENESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDF 300

Query: 301  RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPL 360
            RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPL
Sbjct: 301  RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360

Query: 361  KKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
            KKKD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI
Sbjct: 361  KKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420

Query: 421  ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
            ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK
Sbjct: 421  ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480

Query: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELR 540
            NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELR
Sbjct: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540

Query: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
            GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVI
Sbjct: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVI 600

Query: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
            GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660

Query: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
            FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR
Sbjct: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720

Query: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
            RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780

Query: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
            HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840

Query: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
            APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900

Query: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
            AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960

Query: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
            PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020

Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
            IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080

Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
            QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140

Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPT 1200
            VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1200

Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1225

[Close]

BLAST of HG10006488 vs. NCBI nr
Match: XP_023521965.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo] >XP_023546823.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2299.2 bits (5957), Expect = 0.0e+00
Identity = 1179/1225 (96.24%), Postives = 1204/1225 (98.29%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
            +L KEIELEAHQKRGDR+V+DDRYKGRA  GDRGRDRDR RDRDR RDGDR+RDRDRDRY
Sbjct: 121  ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDGDRNRDRDRDRY 180

Query: 181  RDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRG 240
            RDRDWDRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE YRG
Sbjct: 181  RDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGYRG 240

Query: 241  DAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
            DA DGN NWR DRD  TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKEGL
Sbjct: 241  DARDGNDNWRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGL 300

Query: 301  VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
            VHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301  VHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360

Query: 361  NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
            +GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361  DGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLS 420

Query: 421  VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
            V++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421  VNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 480

Query: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
            SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540

Query: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
            YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG
Sbjct: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600

Query: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
            KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660

Query: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
            PDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720

Query: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
            IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780

Query: 781  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
            GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840

Query: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
            KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900

Query: 901  TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
            TGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960

Query: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
            LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020

Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
            TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080

Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
            RAQDVRKQLLSIMDKYKLDVVSAG+NFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGRNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140

Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
            YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1200

Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
            RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of HG10006488 vs. NCBI nr
Match: XP_008455589.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo])

HSP 1 Score: 2295.8 bits (5948), Expect = 0.0e+00
Identity = 1186/1229 (96.50%), Postives = 1203/1229 (97.88%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-----RDGDRDRDRD 180
            +L+KEIELEAHQK G+R+VEDDRY+ RA  GDRGRDRDR RDR R     RD DRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRGRDRHKDRDVDRDRDRY 180

Query: 181  RDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEEN 240
            RDR RDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYEEN
Sbjct: 181  RDRDRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYEEN 240

Query: 241  ESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG 300
            ES+RGD +DGNGNWRGDR    N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDFRG
Sbjct: 241  ESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRG 300

Query: 301  KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK 360
            KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKK
Sbjct: 301  KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK 360

Query: 361  KDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
            KD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS
Sbjct: 361  KDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420

Query: 421  GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
            GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP
Sbjct: 421  GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480

Query: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGV 540
            EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGV
Sbjct: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540

Query: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 600
            GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGE
Sbjct: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGE 600

Query: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
            TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE
Sbjct: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660

Query: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
            DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP
Sbjct: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720

Query: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
            DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL
Sbjct: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780

Query: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
            TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP
Sbjct: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840

Query: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
            PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG
Sbjct: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900

Query: 901  RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
            RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP
Sbjct: 901  RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960

Query: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
            SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII
Sbjct: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020

Query: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
            AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS
Sbjct: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080

Query: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
            RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE
Sbjct: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140

Query: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKM 1200
            NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKM
Sbjct: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKM 1200

Query: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            SKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of HG10006488 vs. NCBI nr
Match: KAG6599282.1 (ATP-dependent RNA helicase dhx8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2294.2 bits (5944), Expect = 0.0e+00
Identity = 1178/1227 (96.01%), Postives = 1202/1227 (97.96%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR---RDGDRDRDRDRD 180
            +L KEIELEAHQKRGDR+V+DDRYKGRA  GDRGRDRDR RDRDR   RDGDR+RDRDRD
Sbjct: 121  ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDRDGDRNRDRDRD 180

Query: 181  RYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESY 240
            RYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE Y
Sbjct: 181  RYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGY 240

Query: 241  RGDAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKE 300
             GD  DGNGN R DRD  TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKE
Sbjct: 241  TGDTRDGNGNRRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKE 300

Query: 301  GLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKD 360
            GLVHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD
Sbjct: 301  GLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKD 360

Query: 361  VDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGV 420
             D+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGV
Sbjct: 361  ADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGV 420

Query: 421  LSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEG 480
            LSV++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEG
Sbjct: 421  LSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEG 480

Query: 481  SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGL 540
            SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGL
Sbjct: 481  SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL 540

Query: 541  SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600
            SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG
Sbjct: 541  SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600

Query: 601  SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660
            SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC
Sbjct: 601  SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660

Query: 661  TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDL 720
            TGPDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDL
Sbjct: 661  TGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDL 720

Query: 721  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780
            RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE
Sbjct: 721  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780

Query: 781  PEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840
            PEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG
Sbjct: 781  PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840

Query: 841  KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900
            KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA
Sbjct: 841  KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900

Query: 901  GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960
            GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP
Sbjct: 901  GRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960

Query: 961  QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020
            QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM
Sbjct: 961  QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020

Query: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080
            IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS
Sbjct: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080

Query: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140
            LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ
Sbjct: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140

Query: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSK 1200
            PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSK
Sbjct: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSK 1200

Query: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            RKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1225

[Close]

BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match: Q38953 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 1880.1 bits (4869), Expect = 0.0e+00
Identity = 988/1213 (81.45%), Postives = 1066/1213 (87.88%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
            VRSLL  IH I PP+     K  KK++E D +  KF+ LAI D +++ K+L+KEIE EA 
Sbjct: 66   VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDKVKELEKEIEREAE 125

Query: 132  QKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDRD 191
            ++R                    R+ DR RDRDRR+  RDRDRDR+R      DRD  RD
Sbjct: 126  ERR--------------------REEDRNRDRDRRESGRDRDRDRNR------DRDDRRD 185

Query: 192  KHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRGD 251
            +HRDR         R+R D+  ED R   R R+R R +G        G+ ED   + R  
Sbjct: 186  RHRDR--------ERNRGDEEGEDRRSDRRHRERGRGDG--------GEGEDRRRDRRA- 245

Query: 252  RDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISN 311
            +D+   E     N EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQ+ATRR+  
Sbjct: 246  KDEYVEEDKGGAN-EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDK 305

Query: 312  AKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-KDVDNGPRMNPSDTKD 371
            AK+ VKRD EVYVKVIS+S  K SLSMRDVDQ++G+DL+PL+K  D D+  R NPS    
Sbjct: 306  AKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTK 365

Query: 372  DGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGD 431
            DG V +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQLIASGVL V E+P YD++GD
Sbjct: 366  DGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGD 425

Query: 432  GLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIK 491
            G+LYQEEGAEEELEIE+NEDEPAFLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL K
Sbjct: 426  GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTK 485

Query: 492  ERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAYG 551
            ERRE+REQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAYDMPEWKKDA+G
Sbjct: 486  ERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFG 545

Query: 552  KDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 611
            K  +FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA
Sbjct: 546  KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 605

Query: 612  GYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 671
            GYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM
Sbjct: 606  GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 665

Query: 672  LLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 731
            LLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKF
Sbjct: 666  LLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF 725

Query: 732  SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEE 791
            SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEE
Sbjct: 726  SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEE 785

Query: 792  IDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEAS 851
            ID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEAS
Sbjct: 786  IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEAS 845

Query: 852  LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 911
            LTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTE
Sbjct: 846  LTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 905

Query: 912  SAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 971
            SAYRNEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLG
Sbjct: 906  SAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLG 965

Query: 972  ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 1031
            ALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQ
Sbjct: 966  ALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQ 1025

Query: 1032 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1091
            AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSI
Sbjct: 1026 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSI 1085

Query: 1092 MDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1151
            MDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQ
Sbjct: 1086 MDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1145

Query: 1152 PDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRY 1211
            PDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRY
Sbjct: 1146 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRY 1168

Query: 1212 HEPNSWRLSKRRA 1224
            HEPNSWRLSKRRA
Sbjct: 1206 HEPNSWRLSKRRA 1168

[Close]

BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match: A2A4P0 (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 740/1230 (60.16%), Postives = 931/1230 (75.69%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L +NGAE  D  
Sbjct: 22   LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81

Query: 72   VRSLLRIIHLILPPQKGDNEKE--FKKEKESDGKKGKF-----------RALAIGDDRER 131
            + +LLR+I  + PP K    K+   K + E +  +  F           R +   +D + 
Sbjct: 82   ISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTMLDEEDVKV 141

Query: 132  AKDLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDR 191
            A D+ KE+E       G  +  D  ++ R  +  R R RDR RDRD RD DRDRDRDRDR
Sbjct: 142  AVDVLKELEALMPSAAGQEKQRDPEHRDRTKKKKRSRSRDRDRDRD-RDRDRDRDRDRDR 201

Query: 192  YRDRDWDRDKDRDKHRDRYERD--ERHGGRDRDDDGDEDYRRSGRQRDRNR---RNGYEE 251
             +DR+ DRD++RD+ RDR ERD   RH  R R      + R  G+ R R+R   ++ +++
Sbjct: 202  DKDRERDRDRERDRERDR-ERDHKRRHRSRSRSHSRTRE-RTKGKSRYRSRSRSQSPFKD 261

Query: 252  NESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFR 311
             +      E     WR    D       P   EP +  +Y G+V+ +M  GCFVQL   R
Sbjct: 262  RKDREKYGERNLDRWRDKHVDR------PPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLR 321

Query: 312  GK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLP 371
             + EGLVH+S++    R++N  DVV + Q V VKV+S +G K SLSM+DVDQ +G+DL P
Sbjct: 322  KRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNP 381

Query: 372  LKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL 431
             +++++        S    D P   + +S  ++ +D +    R+ L R+S PE+WE KQ+
Sbjct: 382  NRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKWEIKQM 441

Query: 432  IASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIF 491
            IA+ VLS  E+P +D+E   L   ++  +E+LEIEL E+EP FL+G ++ S+DMSP+KI 
Sbjct: 442  IAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIV 501

Query: 492  KNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQEL 551
            KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DPLP+   R +A  +
Sbjct: 502  KNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANM 561

Query: 552  RGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 611
            RG+G+   D+PEWKK A+ G   S+G+K+++SI EQR+SLPIYKLK++L+QAVHDNQ+L+
Sbjct: 562  RGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILI 621

Query: 612  VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 671
            VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY 
Sbjct: 622  VIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYT 681

Query: 672  IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLV 731
            IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFGLLK+ V
Sbjct: 682  IRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTV 741

Query: 732  KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 791
            ++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA+LITV+
Sbjct: 742  QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 801

Query: 792  QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 851
            QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF
Sbjct: 802  QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 861

Query: 852  EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 911
            +PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AK
Sbjct: 862  DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 921

Query: 912  QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 971
            QRAGRAGRTGPGKCYRLYTE AYR+EM  T +PEIQR NL  T L++KAMGINDLLSFDF
Sbjct: 922  QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 981

Query: 972  MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1031
            MD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+
Sbjct: 982  MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEM 1041

Query: 1032 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1091
            LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS PWC+EN
Sbjct: 1042 LTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYEN 1101

Query: 1092 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1151
            F+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KDPQEGYR
Sbjct: 1102 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1161

Query: 1152 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1211
            TL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP FFKV+D
Sbjct: 1162 TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1221

Query: 1212 PTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1221
            PTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1222 PTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239

[Close]

BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match: Q14562 (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 731/1236 (59.14%), Postives = 918/1236 (74.27%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            ++ S     + L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L
Sbjct: 11   LIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASL 70

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKE--FKKEKESDGKKGKF----------- 120
             +NGAE  D  + +LLR+I  + PP K    K+   K + E +  K  F           
Sbjct: 71   VKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSV 130

Query: 121  RALAIGDDRERAKDLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRD 180
            R +   DD + A D+ KE+E       G  +  D  ++ R  +  R R RDR RDRDR  
Sbjct: 131  RTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDR-- 190

Query: 181  GDRDRDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNR 240
             DR+R+RDRD  R R   R + R + R+R +   R+  R R              +DR  
Sbjct: 191  -DRERNRDRDHKR-RHRSRSRSRSRTRERNKVKSRYRSRSRS---------QSPPKDRKD 250

Query: 241  RNGYEENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFV 300
            R+ Y E    R         WR    D       P   EP +  +Y G+V+ +M  GCFV
Sbjct: 251  RDKYGERNLDR---------WRDKHVDR------PPPEEPTIGDIYNGKVTSIMQFGCFV 310

Query: 301  QLNDFRGK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHS 360
            QL   R + EGLVH+S++    R++N  DVV + Q V VKV+S +G K SLSM+DVDQ +
Sbjct: 311  QLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQET 370

Query: 361  GKDLLPLKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPER 420
            G+DL P +++++        S    D P   + +S  ++ +D +    R+ L R+S PE+
Sbjct: 371  GEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEK 430

Query: 421  WEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDM 480
            WE KQ+IA+ VLS  E+P +D+E   L   ++  +E+LEIEL E+EP FL+G ++ S+DM
Sbjct: 431  WEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDM 490

Query: 481  SPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGER 540
            SP+KI KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DPLP+   R
Sbjct: 491  SPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGR 550

Query: 541  HLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVH 600
             +A  +RG+G+   D+PEWKK A+ G   S+G+K+++SI EQR+SLPIYKLK++L+QAVH
Sbjct: 551  QIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVH 610

Query: 601  DNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 660
            DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG
Sbjct: 611  DNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLG 670

Query: 661  EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFG 720
            +EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFG
Sbjct: 671  QEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFG 730

Query: 721  LLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 780
            LLK+ V++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA
Sbjct: 731  LLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDA 790

Query: 781  ALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSE 840
            +LITV+QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSE
Sbjct: 791  SLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 850

Query: 841  MQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPI 900
            MQ+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPI
Sbjct: 851  MQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPI 910

Query: 901  SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGIND 960
            SQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM  T +PEIQR NL  T L++KAMGIND
Sbjct: 911  SQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND 970

Query: 961  LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 1020
            LLSFDFMD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV L
Sbjct: 971  LLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHL 1030

Query: 1021 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1080
            GCS+E+LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS 
Sbjct: 1031 GCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSN 1090

Query: 1081 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKD 1140
            PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KD
Sbjct: 1091 PWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1150

Query: 1141 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR 1200
            PQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP 
Sbjct: 1151 PQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA 1210

Query: 1201 FFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1221
            FFKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1211 FFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215

[Close]

BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match: A1Z9L3 (ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 SV=1)

HSP 1 Score: 1318.9 bits (3412), Expect = 0.0e+00
Identity = 736/1251 (58.83%), Postives = 915/1251 (73.14%), Query Frame = 0


Query: 10   DGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPD 69
            D L+KLEYLSLVSK+C+EL+ HLG  DK LAEFI ++     T D F   L +NGAE PD
Sbjct: 2    DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPD 61

Query: 70   YFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGK----FRALAIGDD----RERAKD 129
              V++L RII+L+ P + G   +E     + + KK +    F  LA+ +D    +E + D
Sbjct: 62   SLVQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDD 121

Query: 130  LQK-----EIELEAHQKRGDREVEDDRYKGRADRGDRG------------RDRDRARDRD 189
             +K     E   E H+K    +V+    +  A     G            RDR + R RD
Sbjct: 122  DEKVKAKPEKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRD 181

Query: 190  RRDGDRDRDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDD-DGDEDYR-RSGRQ 249
            R    R R R+ DR+ DR   R +D+++ R    RD R   R R+D D D D R +S   
Sbjct: 182  RDTKRRSRSRE-DRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSS 241

Query: 250  RDRNRRNGYEENESYRGDAEDGNGNWRGDRDDTQNERHWP----VNHEPELYKVYKGRVS 309
            RD + R     + S   +  D     R DR    +E+  P    +  +PE  K+Y G+++
Sbjct: 242  RDHHERR--RRSRSRSTERRD-----RRDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIA 301

Query: 310  RVMDTGCFVQLNDFRGK-EGLVHVSQI-ATRRISNAKDVVKRDQEVYVKVISVSGKKLSL 369
             ++  GCFVQL   R + EGLVH+SQ+ A  R+++  +VV R+Q V VKV+S++G+K+SL
Sbjct: 302  NIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSL 361

Query: 370  SMRDVDQHSGKDLLPLKKKDVDNGPRMNPSDTKDDGPVVRT----GLSGIKIVEDDVTVP 429
            SM++VDQ SGKDL PL     D+    +  D   DGP   +     L G  +  D+    
Sbjct: 362  SMKEVDQDSGKDLNPLSHAPEDD---ESLRDRNPDGPFSSSTSMLNLQGNGMEGDE--HE 421

Query: 430  SRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEP 489
            SR+ + R+SSPERWE KQ+I+SGVL  SE P +D+E  GLL ++E  E ++EIE+ E+EP
Sbjct: 422  SRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEE-TGLLPKDEDDEADIEIEIVEEEP 481

Query: 490  AFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLN 549
             FL G  R   D+SPV+I KNP+GSL++AA +QSAL KERRE +  Q+   ++++P  LN
Sbjct: 482  PFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLN 541

Query: 550  RPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLP 609
            + W DPLPE   R LA  +RG+  +  ++PEWKK    GK  SFG+K+ L++ EQRQSLP
Sbjct: 542  KNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLP 601

Query: 610  IYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSV 669
            IYKL+ +LI+AV DNQ+L+VIGETGSGKTTQ+TQYL E G+T  GKIGCTQPRRVAAMSV
Sbjct: 602  IYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSV 661

Query: 670  AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDE 729
            AKRVAEE+GCRLG+EVGY IRFEDCT P+T+IKYMTDGMLLRE L++  L  YSVIMLDE
Sbjct: 662  AKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDE 721

Query: 730  AHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 789
            AHERTI TDVLFGLLK  V++RP+L+LIVTSATLDA KFS YFF   IFTIPGRTFPVE+
Sbjct: 722  AHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEV 781

Query: 790  LYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPE 849
            LYTK+PETDYLDA+LITV+QIHL EP GD+LLFLTGQEEID AC+ LYERMK LG +VPE
Sbjct: 782  LYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPE 841

Query: 850  LIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 909
            LIILPVYSALPSEMQ+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN
Sbjct: 842  LIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 901

Query: 910  PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLG 969
             K G+DSLV+TPISQA+AKQRAGRAGRTGPGK YRLYTE AYR+EM PT +PEIQR NL 
Sbjct: 902  SKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLA 961

Query: 970  HTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLD 1029
             T L +K MGINDLL FDFMD P  ++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+
Sbjct: 962  TTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLE 1021

Query: 1030 PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLL 1089
            P LSKML+ SV L CSDEILTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLL
Sbjct: 1022 PNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLL 1081

Query: 1090 AVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKA 1149
            AVY +WK   FS  WC+ENFVQ R+L+R+QDVRKQLL IMD++KLDVVSAGKN  +I+KA
Sbjct: 1082 AVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKA 1141

Query: 1150 ITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVT 1209
            I +GFF +AA+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT
Sbjct: 1142 ICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVT 1201

Query: 1210 VIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1223
             IDPKWLVE AP FF+ +DPTK+SK K+ +R+EPLY++Y EPN+WR+S+ R
Sbjct: 1202 TIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVR 1238

[Close]

BLAST of HG10006488 vs. ExPASy Swiss-Prot
Match: Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)

HSP 1 Score: 1314.3 bits (3400), Expect = 0.0e+00
Identity = 706/1222 (57.77%), Postives = 885/1222 (72.42%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            + KLE + L S+VC+ELE  +G GDK+LAEF+  +      + +F+  + EN  + P+  
Sbjct: 1    MDKLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESL 60

Query: 72   VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
               L  +I           EK  KK   +             ++   AK           
Sbjct: 61   SSHLFNLI-----------EKMKKKTTTTTNNNNNNN----NNNTNTAKTTTTTTTTTTT 120

Query: 132  QKRGD-REVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDR 191
                + +E E +  K  ++  ++ +++        +                +WD+ K  
Sbjct: 121  TNNNNYKESEWEETKLNSNSNNQKKNQFPGLSIPNK---------------VEWDQGKIV 180

Query: 192  DKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRG 251
            D   D             D+   E+ +R  +Q+D +R    E+ E             + 
Sbjct: 181  DVPID-------------DEKTKEELKR--KQQDMDREFEREQRE-------------KR 240

Query: 252  DRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG-KEGLVHVSQIATRR- 311
            DRD  Q  +   ++ EP LYK+Y G+VS + D GCFV L    G ++GLVH+SQI + R 
Sbjct: 241  DRDREQQNKRREIDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGRT 300

Query: 312  -ISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-----KDVDNGPR 371
             +++  DVVKR+Q+V VK++SV+  K+SLSM+DVDQ +G+DL P +             R
Sbjct: 301  KLNHPSDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSTNNR 360

Query: 372  MNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEY 431
             NP    ++        S     +DD    + +  KR++SP+RW  KQLIASG+LSV E 
Sbjct: 361  SNPFKPNNN----NNNSSNNNNNDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPEM 420

Query: 432  PSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAA 491
            P+YD E   + + EE  EE+ +IE NEDEP FL+G       +SP+KI K P GSL RAA
Sbjct: 421  PNYDKEVGLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAA 480

Query: 492  ALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYD-- 551
            + Q+AL KER+E + QQ+  M+DSIPKDL+ PW DP+PE GERHLAQE+R +     D  
Sbjct: 481  STQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTE 540

Query: 552  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 611
            +PEWKK   G  I +G+ +  SI+EQR+SLPI+ L++  +QAV ++Q+LVVIGETGSGKT
Sbjct: 541  IPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKT 600

Query: 612  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 671
            TQ+ QYLAEAGY T GKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P+
Sbjct: 601  TQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE 660

Query: 672  TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 731
            T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI TDVLFGLLKQ ++RRP+L++++
Sbjct: 661  TIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLI 720

Query: 732  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 791
            TSATL+AEKFS YF N  +F IPGRTFPV+I YTK PE DYLDA+LITV+QIHL+EP GD
Sbjct: 721  TSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGD 780

Query: 792  VLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 851
            +LLFLTGQEEID ACQ LYERMK LG NVP+LIILPVYSALPSEMQ++IFEPAPPG RKV
Sbjct: 781  ILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKV 840

Query: 852  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 911
            V+ATNIAE SLTIDGI+YVIDPGF+KQ  +NPK G+DSLV+ PISQA+A+QR+GRAGRTG
Sbjct: 841  VIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTG 900

Query: 912  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 971
            PGKCYRLYTESA++NEM  ++IPEIQR NLG+T LTMKAMGINDLL+FDFMDPP  Q L+
Sbjct: 901  PGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLV 960

Query: 972  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1031
            SAMEQLYSLGALDEEGLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+   
Sbjct: 961  SAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQ 1020

Query: 1032 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1091
            N+FYRP+EKQA ADQK+AKFFQPEGDHLTLL VYE+WK   FS PWCFENFVQ+RSLRRA
Sbjct: 1021 NVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRA 1080

Query: 1092 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1151
            QDVRKQL++IMD+YKLD++SAG+N+T+I+KAI +GFF +A++KDP EGY+TLVE QPVYI
Sbjct: 1081 QDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYI 1140

Query: 1152 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1211
            HPSS LF R PDWVIYHELVMTTKEYMREV  IDPKWLVELAP+FFK +DP K+SKRKR+
Sbjct: 1141 HPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRK 1160

Query: 1212 ERIEPLYDRYHEPNSWRLSKRR 1223
            E+IEPLYD+Y++PN+WR SKR+
Sbjct: 1201 EKIEPLYDKYNDPNAWRPSKRK 1160

[Close]

BLAST of HG10006488 vs. ExPASy TrEMBL
Match: A0A5A7V8X9 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001090 PE=4 SV=1)

HSP 1 Score: 2299.6 bits (5958), Expect = 0.0e+00
Identity = 1187/1231 (96.43%), Postives = 1204/1231 (97.81%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-------RDGDRDRD 180
            +L+KEIELEAHQK G+R+VEDDRY+ RA  GDRGRDRDR RDRDR       R  DRD D
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRDRDRDRGRDRHKDRDVD 180

Query: 181  RDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYE 240
            RDRDRYRDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYE
Sbjct: 181  RDRDRYRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYE 240

Query: 241  ENESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDF 300
            ENES+RGD +DGNGNWRGDR    N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDF
Sbjct: 241  ENESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDF 300

Query: 301  RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPL 360
            RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPL
Sbjct: 301  RGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360

Query: 361  KKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420
            KKKD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI
Sbjct: 361  KKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLI 420

Query: 421  ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480
            ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK
Sbjct: 421  ASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFK 480

Query: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELR 540
            NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELR
Sbjct: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540

Query: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
            GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVI
Sbjct: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVI 600

Query: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
            GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660

Query: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720
            FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR
Sbjct: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKR 720

Query: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
            RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780

Query: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
            HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840

Query: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
            APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900

Query: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
            AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960

Query: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
            PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020

Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
            IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080

Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
            QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140

Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPT 1200
            VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1200

Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1225

[Close]

BLAST of HG10006488 vs. ExPASy TrEMBL
Match: A0A1S3C2I4 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo OX=3656 GN=LOC103495726 PE=4 SV=1)

HSP 1 Score: 2295.8 bits (5948), Expect = 0.0e+00
Identity = 1186/1229 (96.50%), Postives = 1203/1229 (97.88%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDGKKGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-----RDGDRDRDRD 180
            +L+KEIELEAHQK G+R+VEDDRY+ RA  GDRGRDRDR RDR R     RD DRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRDRDRDRDRGRDRHKDRDVDRDRDRY 180

Query: 181  RDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEEN 240
            RDR RDRDWDRDKDRD+ RDRYERDERHGGRDRDDD GD+DYRRSGRQRDRNRRNGYEEN
Sbjct: 181  RDRDRDRDWDRDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNGYEEN 240

Query: 241  ESYRGDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRG 300
            ES+RGD +DGNGNWRGDR    N RH PV+HEPELY VYKGRVSRVMDTGCFVQLNDFRG
Sbjct: 241  ESHRGDVDDGNGNWRGDR----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRG 300

Query: 301  KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK 360
            KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKK
Sbjct: 301  KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK 360

Query: 361  KDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420
            KD D+GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS
Sbjct: 361  KDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIAS 420

Query: 421  GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480
            GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP
Sbjct: 421  GVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480

Query: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGV 540
            EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGV
Sbjct: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540

Query: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 600
            GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGE
Sbjct: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGE 600

Query: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
            TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE
Sbjct: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660

Query: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720
            DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP
Sbjct: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720

Query: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
            DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL
Sbjct: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780

Query: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
            TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP
Sbjct: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840

Query: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
            PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG
Sbjct: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900

Query: 901  RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
            RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP
Sbjct: 901  RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960

Query: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
            SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII
Sbjct: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020

Query: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
            AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS
Sbjct: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080

Query: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
            RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE
Sbjct: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140

Query: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKM 1200
            NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKM
Sbjct: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKM 1200

Query: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            SKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of HG10006488 vs. ExPASy TrEMBL
Match: A0A6J1KEH4 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita maxima OX=3661 GN=LOC111493616 PE=4 SV=1)

HSP 1 Score: 2290.4 bits (5934), Expect = 0.0e+00
Identity = 1179/1233 (95.62%), Postives = 1202/1233 (97.49%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR---RDG------DRD 180
            +L KEIELEAHQKRGDR+V+DDRYKGRA  GDRGRDRDR RDRDR   RDG      DRD
Sbjct: 121  ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDRDGDRNRNRDRD 180

Query: 181  RDRDRDRYRDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGY 240
            RDRDRD YRDRDWDRDKDRD+ RDRYERDERHGGRDR DDG +DY+RSGR RDRN+RNGY
Sbjct: 181  RDRDRDGYRDRDWDRDKDRDRRRDRYERDERHGGRDRGDDGGDDYQRSGRPRDRNKRNGY 240

Query: 241  EENESYRGDAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLN 300
            EENE Y GDA DGNGNWR DRD  TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+N
Sbjct: 241  EENEGYTGDARDGNGNWRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQIN 300

Query: 301  DFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLL 360
            DFRGKEGLVHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLL
Sbjct: 301  DFRGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLL 360

Query: 361  PLKKKDVDNGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQ 420
            PLKKKD D+GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQ
Sbjct: 361  PLKKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQ 420

Query: 421  LIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKI 480
            LIASGVLSV++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKI
Sbjct: 421  LIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKI 480

Query: 481  FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQE 540
            FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQE
Sbjct: 481  FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQE 540

Query: 541  LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 600
            LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV
Sbjct: 541  LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 600

Query: 601  VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660
            VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA
Sbjct: 601  VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660

Query: 661  IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLV 720
            IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLV
Sbjct: 661  IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLV 720

Query: 721  KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780
            KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL
Sbjct: 721  KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780

Query: 781  QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840
            QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF
Sbjct: 781  QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840

Query: 841  EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900
            EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK
Sbjct: 841  EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900

Query: 901  QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 960
            QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF
Sbjct: 901  QRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDF 960

Query: 961  MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020
            MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI
Sbjct: 961  MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020

Query: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080
            LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN
Sbjct: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080

Query: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140
            FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR
Sbjct: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140

Query: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 1200
            TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVAD
Sbjct: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD 1200

Query: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1224
            PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1231

[Close]

BLAST of HG10006488 vs. ExPASy TrEMBL
Match: A0A0A0LG89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1)

HSP 1 Score: 2285.0 bits (5920), Expect = 0.0e+00
Identity = 1180/1225 (96.33%), Postives = 1199/1225 (97.88%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            M ASMA+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKGD+EKE KKEKESDG KGKFRALAIGDDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDG-KGKFRALAIGDDRERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
            +L+KEIELEAHQK G+R+VEDDRY+ RA  GDRGR RDR RDR R R  DRD DRDRDRY
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRA--GDRGRGRDRDRDRGRDRHRDRDVDRDRDRY 180

Query: 181  RDRDWDRDKDRDKHRDRYERDERHGGRDRDDD-GDEDYRRSGRQRDRNRRNGYEENESYR 240
            RDRDWDRDKDRD+ RDRY+RDERHGGRDRDDD GD+D+RRSGRQRDRNRRNGYEENES+R
Sbjct: 181  RDRDWDRDKDRDRRRDRYDRDERHGGRDRDDDGGDDDHRRSGRQRDRNRRNGYEENESHR 240

Query: 241  GDAEDGNGNWRGDRDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
            GD EDGNGNWRGDR    N RH PVNHEPELY VYKGRVSRVMDTGCFVQLNDFRGKEGL
Sbjct: 241  GDVEDGNGNWRGDR----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGL 300

Query: 301  VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
            VHVSQIATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301  VHVSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360

Query: 361  NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
            +GPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361  DGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420

Query: 421  VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
            VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421  VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480

Query: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
            SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540

Query: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
            YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSG
Sbjct: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 600

Query: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
            KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660

Query: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
            PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720

Query: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
            IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780

Query: 781  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
            GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840

Query: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
            KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900

Query: 901  TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
            TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901  TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960

Query: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
            LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020

Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
            TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080

Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
            RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140

Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
            YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1200

Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
            RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1218

[Close]

BLAST of HG10006488 vs. ExPASy TrEMBL
Match: A0A6J1G313 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita moschata OX=3662 GN=LOC111450338 PE=4 SV=1)

HSP 1 Score: 2280.4 bits (5908), Expect = 0.0e+00
Identity = 1174/1225 (95.84%), Postives = 1198/1225 (97.80%), Query Frame = 0


Query: 1    MVASMADGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVAS A+GDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK DNEKEFKKEKESDGKKGKFRALAIGDD+ERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  DLQKEIELEAHQKRGDREVEDDRYKGRADRGDRGRDRDRARDRDR-RDGDRDRDRDRDRY 180
            +L KEIELEAHQKRGDR+V+DDRYKGRA  GDRGRDRDR RDRDR RDGDR+RDRDRDRY
Sbjct: 121  ELVKEIELEAHQKRGDRDVQDDRYKGRA--GDRGRDRDRDRDRDRDRDGDRNRDRDRDRY 180

Query: 181  RDRDWDRDKDRDKHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRG 240
            R    DRDKDRD+ RDRYERDERHGGRDRDDDG +DY+RSGR RDRNRRNGYEENE Y G
Sbjct: 181  R----DRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGYTG 240

Query: 241  DAEDGNGNWRGDRD-DTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGL 300
            D  DGNGN R DRD  TQN RH PV+HEPELYKVYKGRVSRVMDTGCFVQ+NDFRGKEGL
Sbjct: 241  DTRDGNGNRRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGL 300

Query: 301  VHVSQIATRRISNAKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKKKDVD 360
            VHVSQ+ATRRI+NAKDVVKRDQEVYVKVISVSG+KLSLSMRDVDQHSGKDLLPLKKKD D
Sbjct: 301  VHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDAD 360

Query: 361  NGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLS 420
            +GPRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLS
Sbjct: 361  DGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLS 420

Query: 421  VSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSL 480
            V++YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSL
Sbjct: 421  VNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 480

Query: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSA 540
            SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSA
Sbjct: 481  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 540

Query: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600
            YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG
Sbjct: 541  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 600

Query: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660
            KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 601  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 660

Query: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720
            PDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRL
Sbjct: 661  PDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRL 720

Query: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780
            IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE
Sbjct: 721  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 780

Query: 781  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840
            GD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR
Sbjct: 781  GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 840

Query: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900
            KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 841  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 900

Query: 901  TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960
            TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 901  TGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 960

Query: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020
            LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 961  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1020

Query: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080
            TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1021 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1080

Query: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140
            RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV
Sbjct: 1081 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1140

Query: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1200
            YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1141 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1200

Query: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1224
            RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RQERIEPLYDRYHEPNSWRLSKRRA 1219

[Close]

BLAST of HG10006488 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 1880.1 bits (4869), Expect = 0.0e+00
Identity = 988/1213 (81.45%), Postives = 1066/1213 (87.88%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKGDNEKEFKKEKESDGKKGKFRALAIGDDRERAKDLQKEIELEAH 131
            VRSLL  IH I PP+     K  KK++E D +  KF+ LAI D +++ K+L+KEIE EA 
Sbjct: 66   VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDKVKELEKEIEREAE 125

Query: 132  QKRGDREVEDDRYKGRADRGDRGRDRDRARDRDRRDGDRDRDRDRDRYRDRDWDRDKDRD 191
            ++R                    R+ DR RDRDRR+  RDRDRDR+R      DRD  RD
Sbjct: 126  ERR--------------------REEDRNRDRDRRESGRDRDRDRNR------DRDDRRD 185

Query: 192  KHRDRYERDERHGGRDRDDDGDEDYRRSGRQRDRNRRNGYEENESYRGDAEDGNGNWRGD 251
            +HRDR         R+R D+  ED R   R R+R R +G        G+ ED   + R  
Sbjct: 186  RHRDR--------ERNRGDEEGEDRRSDRRHRERGRGDG--------GEGEDRRRDRRA- 245

Query: 252  RDDTQNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISN 311
            +D+   E     N EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQ+ATRR+  
Sbjct: 246  KDEYVEEDKGGAN-EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDK 305

Query: 312  AKDVVKRDQEVYVKVISVSGKKLSLSMRDVDQHSGKDLLPLKK-KDVDNGPRMNPSDTKD 371
            AK+ VKRD EVYVKVIS+S  K SLSMRDVDQ++G+DL+PL+K  D D+  R NPS    
Sbjct: 306  AKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTK 365

Query: 372  DGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGD 431
            DG V +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQLIASGVL V E+P YD++GD
Sbjct: 366  DGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGD 425

Query: 432  GLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIK 491
            G+LYQEEGAEEELEIE+NEDEPAFLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL K
Sbjct: 426  GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTK 485

Query: 492  ERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMPEWKKDAYG 551
            ERRE+REQQQRTMLDSIPKDLNRPWEDP+PETGERHLAQELRGVGLSAYDMPEWKKDA+G
Sbjct: 486  ERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFG 545

Query: 552  KDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 611
            K  +FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA
Sbjct: 546  KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 605

Query: 612  GYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 671
            GYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM
Sbjct: 606  GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 665

Query: 672  LLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 731
            LLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKF
Sbjct: 666  LLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF 725

Query: 732  SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEE 791
            SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEE
Sbjct: 726  SGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEE 785

Query: 792  IDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEAS 851
            ID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEAS
Sbjct: 786  IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEAS 845

Query: 852  LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 911
            LTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTE
Sbjct: 846  LTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 905

Query: 912  SAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 971
            SAYRNEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLG
Sbjct: 906  SAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLG 965

Query: 972  ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 1031
            ALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQ
Sbjct: 966  ALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQ 1025

Query: 1032 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1091
            AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSI
Sbjct: 1026 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSI 1085

Query: 1092 MDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1151
            MDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQ
Sbjct: 1086 MDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1145

Query: 1152 PDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRY 1211
            PDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRY
Sbjct: 1146 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRY 1168

Query: 1212 HEPNSWRLSKRRA 1224
            HEPNSWRLSKRRA
Sbjct: 1206 HEPNSWRLSKRRA 1168

[Close]

BLAST of HG10006488 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 778.5 bits (2009), Expect = 8.0e-225
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 0


Query: 547  DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 606
            DA  K     +K+ L  +QE R+SLPIY  + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380  DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439

Query: 607  YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 666
            YL EAGYT  GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   TV+KY
Sbjct: 440  YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499

Query: 667  MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATL 726
            MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559

Query: 727  DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 786
            DAEKFS YF    IF+ PGR +PVEI YT  PE DY+DAA++T+L IH+ EP GD+L+F 
Sbjct: 560  DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619

Query: 787  TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 846
            TGQEEI+ A + L  R++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620  TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679

Query: 847  IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 906
            IAE SLTIDGI YV+DPGF+K   YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680  IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739

Query: 907  RLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 966
            RLYT   Y N++   T+PE+QR NL    L +K++GI+DL++FDFMDPP  +AL+ ++E 
Sbjct: 740  RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799

Query: 967  LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1026
            L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+   G+IFY
Sbjct: 800  LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859

Query: 1027 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1086
            RP++KQ  AD  R  F     GDH+ LL VY +WK  NFS  WC+EN++Q RS++RA+D+
Sbjct: 860  RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919

Query: 1087 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1146
            R QL  ++++ ++D+ S       +RK+I AGFF H A+      YRT+   Q V+IHP+
Sbjct: 920  RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979

Query: 1147 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
            S L Q  P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D    + +K
Sbjct: 980  SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034

[Close]

BLAST of HG10006488 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 778.5 bits (2009), Expect = 8.0e-225
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 0


Query: 547  DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 606
            DA  K     +K+ L  +QE R+SLPIY  + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 370  DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 429

Query: 607  YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 666
            YL EAGYT  GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   TV+KY
Sbjct: 430  YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 489

Query: 667  MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATL 726
            MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 490  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 549

Query: 727  DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 786
            DAEKFS YF    IF+ PGR +PVEI YT  PE DY+DAA++T+L IH+ EP GD+L+F 
Sbjct: 550  DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 609

Query: 787  TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 846
            TGQEEI+ A + L  R++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 610  TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 669

Query: 847  IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 906
            IAE SLTIDGI YV+DPGF+K   YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 670  IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 729

Query: 907  RLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 966
            RLYT   Y N++   T+PE+QR NL    L +K++GI+DL++FDFMDPP  +AL+ ++E 
Sbjct: 730  RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 789

Query: 967  LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1026
            L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+   G+IFY
Sbjct: 790  LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 849

Query: 1027 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1086
            RP++KQ  AD  R  F     GDH+ LL VY +WK  NFS  WC+EN++Q RS++RA+D+
Sbjct: 850  RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 909

Query: 1087 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1146
            R QL  ++++ ++D+ S       +RK+I AGFF H A+      YRT+   Q V+IHP+
Sbjct: 910  RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 969

Query: 1147 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
            S L Q  P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D    + +K
Sbjct: 970  SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1024

[Close]

BLAST of HG10006488 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 761.5 bits (1965), Expect = 1.0e-219
Identity = 363/647 (56.11%), Postives = 489/647 (75.58%), Query Frame = 0


Query: 554  SFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 613
            S G+ +   +QE R++LPIY  + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT
Sbjct: 388  SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447

Query: 614  TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 673
              GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   T++KYMTDGMLLR
Sbjct: 448  KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507

Query: 674  EILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 733
            E+L + +L  YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +
Sbjct: 508  ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567

Query: 734  FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDF 793
            F    IF  PGR +PV+I +T  PE DY+DAA+ TVL IH+ EP GDVL+FL GQEEI+ 
Sbjct: 568  FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627

Query: 794  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 853
              ++L  +++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTI
Sbjct: 628  VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687

Query: 854  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 913
            DGI YV+DPGF+K   YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT   Y
Sbjct: 688  DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747

Query: 914  RNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 973
             N++   T+PEIQR NL    L++K++GI++LL+FDFMDPP  +ALI ++E L++LGAL+
Sbjct: 748  YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807

Query: 974  EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQ 1033
            + G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+  G +IFYRP++KQ  
Sbjct: 808  QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 867

Query: 1034 ADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1093
            AD     F     GDH+  L +Y +WK  N+S  WC+EN++Q RS++RA+D+R QL  ++
Sbjct: 868  ADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 927

Query: 1094 DKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1153
            ++ ++DV S       IRK+I AGFF H A+      YRT+   Q V+IHP+S L Q  P
Sbjct: 928  ERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP 987

Query: 1154 DWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1199
             WV+YH+LV+T+KEYMR+VT + P+WL+E+AP ++++ D    + +K
Sbjct: 988  RWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034

[Close]

BLAST of HG10006488 vs. TAIR 10
Match: AT5G13010.1 (RNA helicase family protein )

HSP 1 Score: 715.7 bits (1846), Expect = 6.4e-206
Identity = 459/1105 (41.54%), Postives = 658/1105 (59.55%), Query Frame = 0


Query: 149  DRGDRGRDRDRARDRDRRDGDRDRDR----DRDRYRDRDWDRDKDRDKH---RDRYERDE 208
            +RG   R R+  R RDR +  R R R    + D YR R+  R  DRD H   R RY  D 
Sbjct: 138  ERGGSNRHREEHR-RDRSETPRSRQRNTYDEMDHYRRRESYRQSDRDYHGEKRRRYNSDW 197

Query: 209  RHGGRDRDDDGDEDYRRS---GRQRDRNRRNGYEENESYRGDAEDGN--GNWRG-DRDDT 268
            R  GR   DDG +++ RS    R    +RR     +      + D      W    R   
Sbjct: 198  RTPGRSDWDDGQDEWERSPHGDRGSSYSRRPQPSPSPMLAAASPDARLASPWLDTPRSTM 257

Query: 269  QNERHWPVNHEPELYKVYKGRVSRVMDTGCFVQLNDFR-GKEGLV----HVSQIATRRIS 328
             +   W +     +     G   R   +    + N     +EG +    H  +  ++   
Sbjct: 258  SSASPWDMGAPSPIPIRASGSSIRSSSSRYGGRSNQLAYSREGDLTNEGHSDEDRSQGAE 317

Query: 329  NAKDVVKRDQEVYVKVISVSG---KKLSLSMRDVDQHSG--KDLLPLKKKDVDNGPRMNP 388
              K  +     V ++  S           S+ D D  S    D   L+KK+ +   R+  
Sbjct: 318  EFKHEITETMRVEMEYQSDRAWYDTDEGNSLFDADSASFFLGDDASLQKKETELAKRL-- 377

Query: 389  SDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSY 448
                     VR   S + + +      S++  +  +   +WE +QL+ SG +  +E  + 
Sbjct: 378  ---------VRRDGSKMSLAQ------SKKYSQLNADNAQWEDRQLLRSGAVRGTEVQTE 437

Query: 449  DDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQ 508
             D  +         E +  + +++ +P FL G+  Y+    PV   K+P   ++  +   
Sbjct: 438  FDSEE---------ERKAILLVHDTKPPFLDGRVVYTKQAEPVMPVKDPTSDMAIISRKG 497

Query: 509  SALIKERREVREQQQRTMLDSIPKDLNRPWEDPLPETGERHLAQELRGVGLSAYDMP--- 568
            S L+K   E+RE+Q      S  K   R WE      G       + G+  SA  +    
Sbjct: 498  SGLVK---EIREKQ------SANKSRQRFWELAGSNLG------NILGIEKSAEQIDADT 557

Query: 569  ---------EWKKDA-------YGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDN 628
                     ++K +A        G+ +S    SK ++ EQRQ LPI+ ++ EL+Q + +N
Sbjct: 558  AVVGDDGEVDFKGEAKFAQHMKKGEAVSEFAMSK-TMAEQRQYLPIFSVRDELLQVIREN 617

Query: 629  QVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEE 688
            QV+VV+GETGSGKTTQ+TQYL E GYT +G +GCTQPRRVAAMSVAKRV+EE    LG++
Sbjct: 618  QVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDK 677

Query: 689  VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLL 748
            +GYAIRFED TGP+TVIKYMTDG+LLRE L D +L +Y V+++DEAHER++ TDVLFG+L
Sbjct: 678  IGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGIL 737

Query: 749  KQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAAL 808
            K++V RR D +LIVTSATL+A+KFS +F +  IF IPGRTFPV ILY+K P  DY++AA+
Sbjct: 738  KKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNILYSKTPCEDYVEAAV 797

Query: 809  ITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGL----GKNVPELIILPVYSALP 868
               + IH+T P GD+L+F+TGQ+EI+ AC SL ERM+ L     + +  L+ILP+YS LP
Sbjct: 798  KQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLP 857

Query: 869  SEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 928
            +++Q++IF+    G RK +VATNIAE SLT+DGI+YVID G+ K  V+NP+ G+D+L + 
Sbjct: 858  ADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVF 917

Query: 929  PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGI 988
            PIS+A++ QRAGRAGRTGPG CYRLYTESAY NEM P+ +PEIQR NLG+  L +K++ I
Sbjct: 918  PISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKI 977

Query: 989  NDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASV 1048
            ++LL FDFMDPP  + ++++M QL+ LGAL+  G LT LG KM EFPLDPPL+KMLL   
Sbjct: 978  DNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGE 1037

Query: 1049 DLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNF 1108
             L C DE+LTI++M+   ++F+RP+E+  ++D  R KFF PE DHLTLL VY+ WK  ++
Sbjct: 1038 RLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDY 1097

Query: 1109 SGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAAR 1168
             G WC ++++Q + LR+A++VR QLL I+ + K+++ S G ++  +RKAI + +F ++AR
Sbjct: 1098 RGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPDWDIVRKAICSAYFHNSAR 1157

Query: 1169 KDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVE 1205
                  Y       P ++HPSSAL+     PD+V+YHEL++TTKEYM+  T ++P WL E
Sbjct: 1158 LKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAE 1199

The following BLAST results are available for this feature:

BLAST of HG10006488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890443.1	0.0e+00	97.63	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Benincasa hi...	[more]
KAA0063640.1	0.0e+00	96.43	putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo...	[more]
XP_023521965.1	0.0e+00	96.24	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pe...	[more]
XP_008455589.1	0.0e+00	96.50	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [C...	[more]
KAG6599282.1	0.0e+00	96.01	ATP-dependent RNA helicase dhx8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10006488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38953	0.0e+00	81.45	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
A2A4P0	0.0e+00	60.16	ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1	[more]
Q14562	0.0e+00	59.14	ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1	[more]
A1Z9L3	0.0e+00	58.83	ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 S...	[more]
Q54F05	0.0e+00	57.77	ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=...	[more]

BLAST of HG10006488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8X9	0.0e+00	96.43	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me...	[more]
A0A1S3C2I4	0.0e+00	96.50	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me...	[more]
A0A6J1KEH4	0.0e+00	95.62	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita ...	[more]
A0A0A0LG89	0.0e+00	96.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1	[more]
A0A6J1G313	0.0e+00	95.84	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucurbita ...	[more]

BLAST of HG10006488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26560.1	0.0e+00	81.45	ATP-dependent RNA helicase, putative	[more]
AT1G32490.1	8.0e-225	56.95	RNA helicase family protein	[more]
AT1G32490.2	8.0e-225	56.95	RNA helicase family protein	[more]
AT2G35340.1	1.0e-219	56.11	helicase domain-containing protein	[more]
AT5G13010.1	6.4e-206	41.54	RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 481..501
None	No IPR available	GENE3D	2.40.50.140		coord: 264..350 e-value: 3.2E-23 score: 83.6
None	No IPR available	GENE3D	1.20.120.1080		coord: 945..1044 e-value: 2.3E-33 score: 116.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..365
None	No IPR available	PANTHER	PTHR18934:SF230	SUBFAMILY NOT NAMED	coord: 215..1223
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 215..1223
None	No IPR available	CDD	cd05684	S1_DHX8_helicase	coord: 270..346 e-value: 2.62097E-36 score: 130.052
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 747..908 e-value: 1.3752E-82 score: 264.781
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 268..339 e-value: 9.1E-19 score: 78.4
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 796..900 e-value: 1.2E-18 score: 78.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 768..900 e-value: 1.1E-12 score: 48.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 761..941 score: 17.246059
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 568..752 e-value: 5.2E-35 score: 132.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 580..743 score: 20.638084
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 961..1051 e-value: 2.1E-41 score: 153.5
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 962..1050 e-value: 1.2E-24 score: 86.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 541..745 e-value: 1.1E-90 score: 304.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 746..920 e-value: 1.4E-71 score: 241.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 560..1094
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 1108..1183 e-value: 7.7E-25 score: 87.1
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 271..337 e-value: 2.2E-12 score: 47.1
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 270..339 score: 17.433798
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 576..726 e-value: 6.5E-8 score: 32.5
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 685..694
IPR044762	DHX8/ Prp22, DEXH-box helicase domain	CDD	cd17971	DEXHc_DHX8	coord: 565..743 e-value: 1.62384E-125 score: 381.445
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 266..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006488.1	HG10006488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0000390	spliceosomal complex disassembly
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding