HG10006449 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10006449
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSignal peptidase complex subunit 3
LocationChr07: 18661401 .. 18665633 (-)
RNA-Seq ExpressionHG10006449
SyntenyHG10006449
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTCATTTGGGTTCAGAGCCAATGCTTTGCTCACCTTCGCCGCCACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTTTCCGATACCCTCAATTCGCCTTCACCTACAGCACAAGTTCAGGTCTCTCTTTTTCTTTCCTCTCTCTCTGGGTTTTTTCCCCCTCCCCTTTTAGATCTGTGGATTGAATTCTCTTGGATTTTTGGTTGGATTTCGATACCCATTTGGTGATTTGATTTGGGTTTTCTTGTTTTTGTGTCTTAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGAAATGATGAGGTATGATCTCATGGGTTTTATGTTAGATTACGCCTTTTTTTTTTTCTATTGAGTTTGTGGAAATTTGTGTGAGAAGAGGGATTTTGGGGTTTAATATGTAGTGCATTTCAGTTTCCTAACTTGTTGAGCTTTATGGTCCTTTTTTTTTTTGTCTTTTGTACTACATGATTTGTTATTTGATGTGGTGAAATGGGATTGGGATGTATGTGTATTTGAAAATTATGGAAAATGGCTGGGGAGAAGACCCAAGTTGGTTATTGAAGAACATGTAGTCTAGAAGATTAGAGCACGTATCTATGAATGATGATGTGGTTGTTCCTTATTTGAATCCTTTCTCGCCCACAGCCAGCCAAAAAGGGAAGACTTTTCCCTTGAATGTATGAAAATCATGGTAGGGGAAACTTATCTGAGCTTTCATTCTCTTAGGATTAAGATTAGTCCATGTTCCACTTAGTGATTTAGTTCTTGTTTTTTCTAGCATGGGACTTTGCTGTTTTTTCAAAGACACAAAAGAATATGTTGATGAAGAAAGATCATACGAAATGGTAGCCCTGCTAAAGGGTTACAAAAAAGACTTTCAATAAGCAAAAATATGAACAAAAGCATAATTACAAAAAGATGTAGAAAGAGAACACCAGATGGATGCAAAAAGTTTAATGGAGTCCCAAAGCTTGTCAAGGCTAATCACCTCCTCTTTGAAGATCTTGCGGTTCCTCTCAAGCTACAACATCCACAGAATTGCCATGATAGCGTTAGACCAAAGAACTATGACCTTAATCCTGAAAGGAGTTCCAAAAATGAATTGAAACAAAGCCTCTTCATTCCTTCTAGGGAAGCACCAGCTTAGCCTGAACAGACTTAAAAATACTTTGTTGTTTTTTTATATATAGGAAACAAAATTTTGCTGGTTTTTTAATCCAATCGAATGTTGTTTCTTCTTATCTGATGGAAAGTCATGTTTCTCTTAGATAAATGATGGCGGGTTGGCTGTAACCTTGATTAGGGGTTTTGTAATTTCATCAAGAGATTACTTTAACTTGAGTGATTTGAAATCTAAGCTAGATTGGTTACTTGATGGATCTTTAGATACACAAATCATGAATTTTAAAGTATATGAAGAGCAATTTATTAAACACATCAAGTATATGCATGAATATATCGAGAAAGTAAAGATCTCATGGGATAGTATGATAAAGGGGTCTTTTTCACTCACTCGCAAGCAAGAAAGTGATCAAGGAAAGTTAAAATTAAAAGAAAACTTTTCTTTTTGTTGAGTTCTTTGAAAGAATAGGTTTCTTTTGTTTGAATTTGTAAGTGTGAGATTGAGTATGGATATTTTCTAGGAAGTGTGAGATTCAACAATAGTTCAAAATCATCAAAGGAAATCTTGATTCATCCATCTTTAGTGCTTTTTTTTGGTGTAACACTTACCATTCCTTAAAGATCACAACCTCAGCTACCTAGGGCTAATTGGAATATGATTTTGTAATCCCATTTTATAGGCTCTTTTACATATCCTTTGGATTATTTTATTCATCAATGAAATCGTTGCCTTTCCAAAAATAATTATGAATATTTTTTGGAGGTGATAAACTTCCAACGAAATTATCCCTTAAGCTAGACTTCCATGACCTATGAAGCACAAATACTTCATGTGAGGCAAAGAATCCGTATCAGATACCGATACTTCCAGATACTTCCCAGATACGTATCTAACATGCGATTTGGCGTATCTGTTTATACAGTGACCTCTTTTTAAAGAAAAAAAATATGCATCTTATCTAATCTTTCCCAACCCAAAACTAAGTAGCCTACTTAAAAAGCCCACTGCCCCATCAAAACTAAAAGGGAAAAAAATAATAATAAAAGACCAAACTCTAGAATCATCTAATCTTCATCTTCACGCTTGATTCTCTACAAAGTCCTGCAAAATATAACCCAATTGAATATCTTCAACAATTCAACGAAGGAGTTCTTCATTTATCTTCATACTTCTCCCGCTAATCTTTTTATTCTTCTTCTCTAATCAATCTTAGTCCCTTTTCTATTGCATTTTATTGACTATTGTACTTCAACATCTCATATGTTCCTTTTTGTATTGTATTTCAGTGTTTGTATTGTATTTTGTACTATTTTGTCATTAACTTGTATGTTAAATCTACCTATATCCTAGATTTTTTTAAGGAAAAAAATGTATCTTCAAAGTATCAATATCCTAGTTTTTTAGAAATTGACGTATCACTGTATCTTATCCGGTATCCCATATCTGTATCTATGTCCGTGCTTTATAGTCCATGACTCTCTTCATGAACGAGTCCTTTTTCAATGCTTTTGATGAATATGTATGCAATCTCATCTCCTGCCTTATAGTAGTATTAAGTAAATATTTCTCTATTTATGATCAGACCTCTAAGGAAATAATATTTGATTTTTATGTGATTATTCCCTTTATGGAAAGGTGGACTTTGTGTGAGAGCGATTGACAAGCTTACTATCCCAAAAGAATGTAATCCTTTTTTCTTGAAGGACACTTCAGTTCTTCAGAAGCACTTTGGTCAACCAAACTGCTTGATAAAGGAACTGAAAAAAATATATAATAAATAAATAAATAAATAAATAATTCAATTTTTGTCATTGATAGGCACAAAGCAGATTCTTTGCAAGAGGATTGATGAGAGCTTAATATCATTAAACATTGCAATCACTTTTTCTTGATTATTTGAAGGAATGCATCTTTTTGCAGGTTAGCATGACTTTAAACATATCAGCGGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCAGTGGCAACCTATTTTCCTTGTTCTCTCTCACAATCCTTCCTAGACAGGCTGGTTGGTTAATTAAGATGGTTATAAATAATGAGTTGATAGAACGCGTTTCTTTATTCACACTGAGTGATCGATACATAGTTGAGGAAGAATTGAAGCTAAAACTTCACCCAGAAAGTACCCTCTCTATCATAATCTTTTTCGCTACATACTCTCTTGACTCGCTCCCTCCCACCAATCTAACTGACTACTTACATTAAGGGCCAGCCCACTCCTTATGTTCATGCTAAATGCTAAGTCATTCTCCTTCTCCCTTTACTTTCTTACTTCTATATATACTCTTAACTATCCACGATCGAGGGTCTGTAATAAACCTCATACAAATTTTCATAATGCCTGAAGTTCATAGAATAGCCAGACGTCCATTTTGTACAGGGTGGTCGTCATGGCTTGCCTCTGTTTGTGTATTCTGTGAACTACGTTGTTCAAGTTAATAATAGTGTTGGGGATTACATTGGTTTCATCTGTTTATATTCATATTTCATAAACTATAATAAACCCTTTCTTTCTTGAGATTTTTCAGTGTCGTGATAATCTTCATTTTAATATGTACAACAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGGTGAGTTTCTGCTCGTCTCTTTCGCCGACTTGTCTTGATTTGCCGTAGATTTTTACCTTTCTCATGATCGAAATCACAAAAAGTTCACATATTTACATGGAGCTTCTTTATACATTTACTTCAATTTAATCCCTTTGTGAAATGCCATTTGCAGATCTCACTTTGGGATGGTATTGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGTTCGTGACCTCCAGTCCCTTTGCAAAACCTTCTCCAACCTGTTTATGATGATTAATAAGTTGTAGTTCTCCTTATGCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGATAAATTGGTGATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

mRNA sequence

ATGCATTCATTTGGGTTCAGAGCCAATGCTTTGCTCACCTTCGCCGCCACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTTTCCGATACCCTCAATTCGCCTTCACCTACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGAAATGATGAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGATCTCACTTTGGGATGGTATTGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGATAAATTGGTGATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

Coding sequence (CDS)

ATGCATTCATTTGGGTTCAGAGCCAATGCTTTGCTCACCTTCGCCGCCACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTTTCCGATACCCTCAATTCGCCTTCACCTACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGAAATGATGAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGATCTCACTTTGGGATGGTATTGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGATAAATTGGTGATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

Protein sequence

MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Homology
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BLAST of HG10006449 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo] >KAA0047947.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa] >TYK18328.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 4.7e-73
Identity = 144/167 (86.23%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE  
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP+NSLNQISLWDGIVPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

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BLAST of HG10006449 vs. NCBI nr
Match: XP_038888523.1 (signal peptidase complex subunit 3B-like [Benincasa hispida])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 143/167 (85.63%), Postives = 144/167 (86.23%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRAN LLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE  
Sbjct: 1   MHSFGFRANVLLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPMNSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of HG10006449 vs. NCBI nr
Match: XP_004139189.1 (signal peptidase complex subunit 3B [Cucumis sativus] >KAE8651592.1 hypothetical protein Csa_023454 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71
Identity = 142/167 (85.03%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRANALLTFAATILAVICA ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDE  
Sbjct: 1   MHSFGFRANALLTFAATILAVICAFASFSDTLNSPSPTAQVQVLSINWFQKQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGIVPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPLNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

[Close]
BLAST of HG10006449 vs. NCBI nr
Match: XP_022946298.1 (signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal peptidase complex subunit 3B [Cucurbita pepo subsp. pepo] >KAG6599260.1 Signal peptidase complex subunit 3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 9.7e-71
Identity = 139/167 (83.23%), Postives = 144/167 (86.23%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDE  
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of HG10006449 vs. NCBI nr
Match: XP_022999140.1 (signal peptidase complex subunit 3B [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 2.8e-70
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDE  
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQCQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match: Q53YF3 (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.3e-59
Identity = 111/167 (66.47%), Postives = 128/167 (76.65%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFA TILA ICA+ASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDE  
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VF F+AAEYET  N+LNQ+SLWD I+P KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match: Q9MA96 (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.2e-56
Identity = 105/167 (62.87%), Postives = 127/167 (76.05%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MH+FG+RANALLTFA T LA ICA+ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDE  
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVF+AAEYETP NSLNQ+SLWD I+P+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match: Q9LGB4 (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 74/145 (51.03%), Postives = 90/145 (62.07%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVF 60
           MHS+  R     T AA +L   C  AS  D  + PS  AQ  V  IN F  Q NGND+VF
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGNDKVF 60

Query: 61  VFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFNLTLHW 120
           VFL AEYE   NSLNQ+SLWD I+P K+ A  Q+   +KY  +DQGS+LRGK+  L LHW
Sbjct: 61  VFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSKYPLIDQGSSLRGKKVQLVLHW 120

Query: 121 HVMPKTGKMFADKLVMSGYRLPQEY 146
           HVMPK G M  D++ +S + LP  Y
Sbjct: 121 HVMPKAGVMIRDRMALSEFNLPDSY 145

[Close]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match: Q3SZU5 (Signal peptidase complex subunit 3 OS=Bos taurus OX=9913 GN=SPCS3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 58  EVFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQI-HTSNKYRFVDQGSNLRG-KEFN 117
           ++F++L+AEY T  N+LNQ+ LWD IV   +  K  +     KY F D G+ L+G +   
Sbjct: 84  QLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVT 143

Query: 118 LTLHWHVMPKTG 128
           LTL W+V+P  G
Sbjct: 144 LTLSWNVVPNAG 155

[Close]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match: P61008 (Signal peptidase complex subunit 3 OS=Canis lupus familiaris OX=9615 GN=SPCS3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 58  EVFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQI-HTSNKYRFVDQGSNLRG-KEFN 117
           ++F++L+AEY T  N+LNQ+ LWD IV   +  K  +     KY F D G+ L+G +   
Sbjct: 84  QLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVT 143

Query: 118 LTLHWHVMPKTG 128
           LTL W+V+P  G
Sbjct: 144 LTLSWNVVPNAG 155

[Close]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match: A0A5A7U155 (Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00390 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 144/167 (86.23%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE  
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP+NSLNQISLWDGIVPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match: Q84KA8 (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 144/167 (86.23%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE  
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP+NSLNQISLWDGIVPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match: A0A1S3BZ61 (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 144/167 (86.23%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFGFRANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE  
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP+NSLNQISLWDGIVPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match: A0A6J1G3E6 (Signal peptidase complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111450422 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.7e-71
Identity = 139/167 (83.23%), Postives = 144/167 (86.23%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDE  
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match: A0A6J1KEG9 (Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111493612 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDE  
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQCQPNGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of HG10006449 vs. TAIR 10
Match: AT5G27430.1 (Signal peptidase subunit )

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-60
Identity = 111/167 (66.47%), Postives = 128/167 (76.65%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MHSFG+RANALLTFA TILA ICA+ASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDE  
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VF F+AAEYET  N+LNQ+SLWD I+P KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]
BLAST of HG10006449 vs. TAIR 10
Match: AT3G05230.1 (Signal peptidase subunit )

HSP 1 Score: 217.6 bits (553), Expect = 6.5e-57
Identity = 105/167 (62.87%), Postives = 127/167 (76.05%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MH+FG+RANALLTFA T LA ICA+ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDE  
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 120
                              VFVF+AAEYETP NSLNQ+SLWD I+P+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 147
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]
BLAST of HG10006449 vs. TAIR 10
Match: AT3G05230.2 (Signal peptidase subunit )

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-34
Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 0 

Query: 1   MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDE-- 60
           MH+FG+RANALLTFA T LA ICA+ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDE  
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  -------------------VFVFLAAEYETPTNSLNQISLWDGIVPSKEIAKFQIHTSNK 106
                              VFVF+AAEYETP NSLNQ+SLWD I+P+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

The following BLAST results are available for this feature:
BLAST of HG10006449 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454895.14.7e-7386.23PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal... [more]
XP_038888523.11.4e-7285.63signal peptidase complex subunit 3B-like [Benincasa hispida][more]
XP_004139189.12.6e-7185.03signal peptidase complex subunit 3B [Cucumis sativus] >KAE8651592.1 hypothetical... [more]
XP_022946298.19.7e-7183.23signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal ... [more]
XP_022999140.12.8e-7083.23signal peptidase complex subunit 3B [Cucurbita maxima][more]
BLAST of HG10006449 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q53YF32.3e-5966.47Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430... [more]
Q9MA969.2e-5662.87Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230... [more]
Q9LGB41.1e-3551.03Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=3... [more]
Q3SZU51.4e-0841.67Signal peptidase complex subunit 3 OS=Bos taurus OX=9913 GN=SPCS3 PE=2 SV=1[more]
P610081.4e-0841.67Signal peptidase complex subunit 3 OS=Canis lupus familiaris OX=9615 GN=SPCS3 PE... [more]
BLAST of HG10006449 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U1552.3e-7386.23Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
Q84KA82.3e-7386.23Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV... [more]
A0A1S3BZ612.3e-7386.23Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 ... [more]
A0A6J1G3E64.7e-7183.23Signal peptidase complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111450422... [more]
A0A6J1KEG91.4e-7083.23Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111493612 P... [more]
BLAST of HG10006449 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27430.11.7e-6066.47Signal peptidase subunit [more]
AT3G05230.16.5e-5762.87Signal peptidase subunit [more]
AT3G05230.21.6e-3457.14Signal peptidase subunit [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..59
e-value: 0.0031
score: 14.7
coord: 54..146
e-value: 1.2E-20
score: 71.4
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 58..143
e-value: 3.9E-28
score: 98.1
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 59..146
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..59
NoneNo IPR availablePANTHERPTHR12804:SF11SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 59..146
NoneNo IPR availablePANTHERPTHR12804:SF11SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10006449.1HG10006449.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045047 protein targeting to ER
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005787 signal peptidase complex
molecular_function GO:0004252 serine-type endopeptidase activity