HG10006427 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTTGATAGTACTTTATCCTCATAGAGATTTTGACCCAAAAATTTGGAATGATATTATGGAGACATCACCGGAGATTGATCTACGTCAACCAAGTTTTAGGATCAATTCAAGGGAATTGGACTACAATAATGAAGATGATGAGGATGATTGTACTTCTTCTGGGGAAAGTATTAGGAAGAAAGTTACGGTTTCATTTGAGTTGCGTTTCAATTTTTATGAAGTGAGTATAAATAGATGTGGTGTTCATGTTATCATGGAGGAATGA ATGTGGTTGATAGTACTTTATCCTCATAGAGATTTTGACCCAAAAATTTGGAATGATATTATGGAGACATCACCGGAGATTGATCTACGTCAACCAAGTTTTAGGATCAATTCAAGGGAATTGGACTACAATAATGAAGATGATGAGGATGATTGTACTTCTTCTGGGGAAAGTATTAGGAAGAAAGTTACGGTTTCATTTGAGTTGCGTTTCAATTTTTATGAAGTGAGTATAAATAGATGTGGTGTTCATGTTATCATGGAGGAATGA ATGTGGTTGATAGTACTTTATCCTCATAGAGATTTTGACCCAAAAATTTGGAATGATATTATGGAGACATCACCGGAGATTGATCTACGTCAACCAAGTTTTAGGATCAATTCAAGGGAATTGGACTACAATAATGAAGATGATGAGGATGATTGTACTTCTTCTGGGGAAAGTATTAGGAAGAAAGTTACGGTTTCATTTGAGTTGCGTTTCAATTTTTATGAAGTGAGTATAAATAGATGTGGTGTTCATGTTATCATGGAGGAATGA MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELRFNFYEVSINRCGVHVIMEE Homology
BLAST of HG10006427 vs. NCBI nr
Match: XP_038876369.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13 Identity = 52/91 (57.14%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of HG10006427 vs. NCBI nr
Match: XP_031737216.1 (TMV resistance protein N isoform X3 [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of HG10006427 vs. NCBI nr
Match: XP_011648801.1 (TMV resistance protein N isoform X2 [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of HG10006427 vs. NCBI nr
Match: XP_008465653.2 (PREDICTED: TMV resistance protein N-like [Cucumis melo]) HSP 1 Score: 78.2 bits (191), Expect = 4.0e-11 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of HG10006427 vs. NCBI nr
Match: XP_008455000.2 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo]) HSP 1 Score: 77.8 bits (190), Expect = 5.3e-11 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of HG10006427 vs. ExPASy TrEMBL
Match: A0A0A0LFP7 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-11 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of HG10006427 vs. ExPASy TrEMBL
Match: A0A1S3CPD4 (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503294 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-11 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of HG10006427 vs. ExPASy TrEMBL
Match: D9I8I6 (TIR-CC-NBS-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11 Identity = 47/89 (52.81%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of HG10006427 vs. ExPASy TrEMBL
Match: A0A1S4DZW3 (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495278 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of HG10006427 vs. ExPASy TrEMBL
Match: A0A1S3C131 (TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495278 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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