HG10006426 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006426
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box domain LysM domain containing protein
Location	Chr07: 18457532 .. 18459830 (-)
RNA-Seq Expression	HG10006426
Synteny	HG10006426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGCTGTTGCGAACAAGATGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCCGCCGTTCAGTCTCTCCCGCCCCAACCTCCACCGGCCGATTCCTCCACTGCCGTACTGTCTCCGATGAATTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCTCCGATTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGCAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTGTGGGGTAACAATGTTGTTGTTGTCTTATTCATGAGAAAGTGACTGGAAATTAGGGAAAGAACCAGTAGAATTTCTGAGATTCTATTCAATTTTAAGGAGTTTCGATCATTTGTTTTCCTTGATCGCTCTCCTTCTCTGGTTAGACTTTAATCATGTTTCTCTGAAAATCACGCCTATGCGATAGTTTTATGGCTGTTCAAACTTAAGAAGTCCTCTTACTGAATTTTTGTTTACTTGTTGGAGGTGGAAACAGACGAATTGAAAGTGAGGGAACTAGAGTACAGAAAACATTTTAGCCTTCAGTACTCCTGTTATAGATATGTGGTTTATTACAGCAATGTAGCTTGTAGGTACTCATTTTCTTTAACATTGATCTTGAAAAATCACTGGTGCTTTGAAGTTCGAACATTAATTGAAATTTGTTAACCTTTCACAACAATAACTGTACTTCATACTCTGTTGTTTGTGTTCCCAACTCTCAAGTCCATGTTAAATTTATGAAGGACGGTCATGTTCCATTGTTGAGATCAACTCTTTATGATGGCTATGTTCTTTGATACATTATTGAAATCACCAGCAGTCTGAACAATACTTGAAACTTGAGTGTGTGTATTTATATATATTAATGAAATAAACCACTTTCATCTAGAAAATAAATGAAAGAATACAAAAATACCAAGCCCACAAAAGAGGGACCCCTCTAAATGAAGGGGGACCAATCAAGCAAAATAGTCCTCTAGAATAGTTACAAAAGAACTTGGAAGTCGAAGCCCAAAGAGATAGATGAAACTCAATAAGAGTCCAAACATCACATTACTAGGGCTCCTTTCCAACCCTCTAAACACTCTATTGTTCCTTTTCTCCCAAAAATTCCACATGATAGTACACACCTCAGCCACCCATAAGAAACGACCCTTCTTACAAAAGAGCGGATGGAGGAGGAACTCCTCGATCATATCACTGGTGTGAAACATGTGTATCTTTCATCTCAATACATGGGTTACAAAAATGAAGAATGCATTTTTTAAGTAGTTCCCCCCTCAACAAAAAAAAAAAAAAAAAAAAAAAAACTCCATAATCCTTCTAAATTGTAAAATATCAATTAGGAAGGATCAATTATAATTGTTGAAATCAACTCTTTTTGGTGGCCATGAACTTGGGTGTGTTGTTGAAATCATCGATAGTCTTAACCATAGTTGACACTTGTATATCCTTCACAAAAGTACCTTGGCAACAAAAATGAAGAGTGCAATAGTTTGTTTTCCCCACTCTCAAGCCCTTGTAGTATATCAACTAGGAAGGGTCGAGTTCAATTGTTGAGATCAATCTTTTTTGTGGAATTTCATTTACATATATTGTTCGTATAGGTTGTAGACATAAAATGTCTAAATAACATGATGGAACTGTGGCATTGTTTGAGATGAATATTTTTTTATGGCTATGGACTTTGGAGTATTGATTTCGTTTATATATATTGTTCTTGTAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATTGCGAAACGAGAAGTTGCAGTATTGTATTTGGATGGAATCCCCATGACCCATCATTTGTATGGTAAAGTGACATGCGAACAGGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTCGATGACGAAACCGCTCAATATTACTTATCTATTTCCAATGGCGATCCTCGAGCAGCTCTTACTGAATTCGCTGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

mRNA sequence

ATGGGATGCTGTTGCGAACAAGATGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCCGCCGTTCAGTCTCTCCCGCCCCAACCTCCACCGGCCGATTCCTCCACTGCCGTACTGTCTCCGATGAATTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCTCCGATTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGCAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATTGCGAAACGAGAAGTTGCAGTATTGTATTTGGATGGAATCCCCATGACCCATCATTTGTATGGTAAAGTGACATGCGAACAGGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTCGATGACGAAACCGCTCAATATTACTTATCTATTTCCAATGGCGATCCTCGAGCAGCTCTTACTGAATTCGCTGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

Coding sequence (CDS)

ATGGGATGCTGTTGCGAACAAGATGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCCGCCGTTCAGTCTCTCCCGCCCCAACCTCCACCGGCCGATTCCTCCACTGCCGTACTGTCTCCGATGAATTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCTCCGATTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGCAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATTGCGAAACGAGAAGTTGCAGTATTGTATTTGGATGGAATCCCCATGACCCATCATTTGTATGGTAAAGTGACATGCGAACAGGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTCGATGACGAAACCGCTCAATATTACTTATCTATTTCCAATGGCGATCCTCGAGCAGCTCTTACTGAATTCGCTGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

Protein sequence

MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

Homology

[Close]

BLAST of HG10006426 vs. NCBI nr
Match: XP_004139174.1 (F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_023439 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145
Identity = 257/269 (95.54%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSPA+ S PPQPPPAD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSI DLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIPMT HLYGKVT EQGMSSVQVNKRVLHSLSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YLSISNG+PRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of HG10006426 vs. NCBI nr
Match: XP_038877035.1 (F-box protein At1g55000 [Benincasa hispida])

HSP 1 Score: 520.8 bits (1340), Expect = 7.1e-144
Identity = 254/269 (94.42%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP VQSLPP+PPP DSS  VLSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVQSLPPEPPPEDSSAVVLSPMNSHFLALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSI DLARSSCV RLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVSRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMISDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP+THHLYGK TCE+GMSSVQVNKRVLH LSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPITHHLYGKETCERGMSSVQVNKRVLHLLSRSMMVDDETAQY 240

Query: 241 YLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YLSISNGDPRAALTEFAEDIRWERH+SIA
Sbjct: 241 YLSISNGDPRAALTEFAEDIRWERHLSIA 269

[Close]

BLAST of HG10006426 vs. NCBI nr
Match: XP_022150720.1 (F-box protein At1g55000 [Momordica charantia])

HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137
Identity = 247/269 (91.82%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNP+ AV S    PP ADSSTAVLSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E LSI DLARSSCVCRLW SVASD EIV+GAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP THHLYGKVTCEQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YLSIS+GDPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of HG10006426 vs. NCBI nr
Match: XP_022937590.1 (F-box protein At1g55000 [Cucurbita moschata])

HSP 1 Score: 487.3 bits (1253), Expect = 8.7e-134
Identity = 244/270 (90.37%), Postives = 252/270 (93.33%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of HG10006426 vs. NCBI nr
Match: KAG6586259.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 243/270 (90.00%), Postives = 252/270 (93.33%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP THHLYG+ T +QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGRETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of HG10006426 vs. ExPASy Swiss-Prot
Match: Q9FZ32 (F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.8e-74
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of HG10006426 vs. ExPASy Swiss-Prot
Match: Q6DEF4 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.7e-04
Identity = 21/52 (40.38%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 116 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+
Sbjct: 60  LGEKYIEHRVTDGETLQGIALKYGVTMEQIKRVNKLFSNDCIFLRNTLSIPV 111

[Close]

BLAST of HG10006426 vs. ExPASy Swiss-Prot
Match: Q7Z3D4 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Homo sapiens OX=9606 GN=LYSMD3 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-04
Identity = 21/67 (31.34%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 112 RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN 171
           RD       ++  I  GD+L ++A++Y   V DIKR+NN++SD   ++   + IP+   +
Sbjct: 56  RDRLDDIIVLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFS 115

Query: 172 ILINSIC 179
            L  ++C
Sbjct: 116 SLTETLC 122

[Close]

BLAST of HG10006426 vs. ExPASy TrEMBL
Match: A0A0A0LFS6 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145
Identity = 257/269 (95.54%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSPA+ S PPQPPPAD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSI DLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIPMT HLYGKVT EQGMSSVQVNKRVLHSLSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YLSISNG+PRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of HG10006426 vs. ExPASy TrEMBL
Match: A0A6J1D9A3 (F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.2e-138
Identity = 247/269 (91.82%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNP+ AV S    PP ADSSTAVLSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E LSI DLARSSCVCRLW SVASD EIV+GAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP THHLYGKVTCEQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YLSIS+GDPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of HG10006426 vs. ExPASy TrEMBL
Match: A0A6J1FH66 (F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134
Identity = 244/270 (90.37%), Postives = 252/270 (93.33%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of HG10006426 vs. ExPASy TrEMBL
Match: A0A6J1HS58 (F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.7e-133
Identity = 242/270 (89.63%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP VQS P Q P    SSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGDPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of HG10006426 vs. ExPASy TrEMBL
Match: A0A5A7TYE5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP V S P QPPPAD STA+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPLQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E+LSI DLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  EHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQ 219
           EMDAIAKREVAVLYLDGIPMT HLYGKVT EQGMSSVQ
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 218

[Close]

BLAST of HG10006426 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.0e-75
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of HG10006426 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.0e-75
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of HG10006426 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.0e-75
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of HG10006426 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 24/62 (38.71%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 106 SSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLI 165
           SS  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L I
Sbjct: 63  SSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQI 122

Query: 166 PI 168
           P+
Sbjct: 123 PL 124

[Close]

BLAST of HG10006426 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05
Identity = 20/47 (42.55%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Sbjct: 70  IEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPL 116

The following BLAST results are available for this feature:

BLAST of HG10006426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139174.1	2.2e-145	95.54	F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_0...	[more]
XP_038877035.1	7.1e-144	94.42	F-box protein At1g55000 [Benincasa hispida]	[more]
XP_022150720.1	1.7e-137	91.82	F-box protein At1g55000 [Momordica charantia]	[more]
XP_022937590.1	8.7e-134	90.37	F-box protein At1g55000 [Cucurbita moschata]	[more]
KAG6586259.1	1.9e-133	90.00	F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-b...	[more]

BLAST of HG10006426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ32	2.8e-74	60.91	F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1	[more]
Q6DEF4	6.7e-04	40.38	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rer...	[more]
Q7Z3D4	8.8e-04	31.34	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Homo sapi...	[more]

BLAST of HG10006426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFS6	1.1e-145	95.54	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 S...	[more]
A0A6J1D9A3	8.2e-138	91.82	F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1	[more]
A0A6J1FH66	4.2e-134	90.37	F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1	[more]
A0A6J1HS58	4.7e-133	89.63	F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1	[more]
A0A5A7TYE5	1.3e-114	94.50	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 P...	[more]

BLAST of HG10006426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55000.1	2.0e-75	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	2.0e-75	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	2.0e-75	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G08200.1	1.1e-06	38.71	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.3e-05	42.55	Peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 122..166 e-value: 3.3E-4 score: 30.0
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 124..166 e-value: 9.5E-7 score: 28.8
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 121..165 score: 11.711089
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 121..165 e-value: 8.29917E-8 score: 45.5541
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 54..85 e-value: 1.3E-6 score: 28.1
None	No IPR available	GENE3D	1.20.1280.50		coord: 52..87 e-value: 8.6E-8 score: 33.9
None	No IPR available	PANTHER	PTHR20932:SF8	LD22649P	coord: 1..268
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 117..171 e-value: 3.8E-13 score: 50.8
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 122..166
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 1..268
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 54..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006426.1	HG10006426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding