HG10006380 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006380
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein PP2-B15-like
Location	Chr07: 17887202 .. 17888871 (+)
RNA-Seq Expression	HG10006380
Synteny	HG10006380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAGTGATGATCTCAAATAATAATAATAATAATAATAATAATAATAATAATAATAATTAAATGAAAATTAATTTTTTTTGTTTAGAGCTTTGAGATGGAAAGATTTTCGGGGAAAATAATTTACACATTGTCTGCAAGAGATTTGGCGATCACATGGAGCTCTGATCCACTCTGTTGGACCTGGAAATCTCATTCACAATCTAGGTATATATTTCTTTATTTATTTTCTATTTTTCATAAATAATTTTTTTTTTTTGTTAAATTATAAAAAATATCCTTGAACTTTGTTATATATTTAAAAAACATCGCATATTTTCAAAAGTTGCAATATTACTCGTTAACTTTCATAAACTTTAAAAAATACGAAACTCTTTAGAATTTTGAACAAAAATTGAGATACGAAATAGTGTGACAGTGACTTAAAACGAAAATTAGATCAGCACATCATTTTACATTATCATGACACAGTTCTAAGTCTTGATTTTTGTTATCAAAATTCCAAGGGTGCTTTTGAAACGTTTATAAATATTAATGGGCAATATTGCAACTTTTAAAAGTATAGGAGTATCTTTTAAACAAATGACAAAATTGAAGGGTATTTGTTATAATTTAGCCATAATTTGAATGGGTTGCCTCCAATTTTACCATAAATCCAACCCCTAATTGCAATATATATATATATATAAACATTTCAAAAACTATCTTTAAAATGATGTGACGGTGACTTATAACGAAAATTGGAATCCAAACATTATTGTTCTAGTTCAACTAAGGTCATATCCACTATTTTAAGTTACTATTTTCATCGCTAATTATGAATTGTTAATGATCCAACAGTACTTTTAAAACATTATTATCTAATACAAATCCATTTTGTGCAGATTTTCAGAAGTGGCAGAGCTTAGAACAGTGAGTTGGCTAGAAATTAATGGGAAAATCAGAACCCAAATGCTTTCTTCAAACACAAAATATGGAGCATTTCTTTTGGTGAAGATTTCAGAGAGAGCTTATGGATTGGATTTGATGCCAACTCAAGTTTCTGTTCAATTGGGAAATAACATTATTTCTGAAGCCTCTGTTTGGTTGCAACATAAAGATGAAAAGAAGCAAAATTTGGAGTGTTTGTTTTATGGGAATAGAAGGGAAAGAGCCAGAAGTTTAATGGTGGCTGATCATCAAGAAATTAGGGTTTTAAGAGAGAGAGAAGATGGTTGGTTGGAGATTGAATTAGGAGAATTTTTCAGTGGGGAAAATGATGAACAAATCAATATGAGTTTCATGGAAACCAAAGGCTTTCAACTCAAATCCGGACTTCTTATTCAAGGCATTCAAATCCGACCTAAAAATTGA

mRNA sequence

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGAGCTTTGAGATGGAAAGATTTTCGGGGAAAATAATTTACACATTGTCTGCAAGAGATTTGGCGATCACATGGAGCTCTGATCCACTCTGTTGGACCTGGAAATCTCATTCACAATCTAGATTTTCAGAAGTGGCAGAGCTTAGAACAGTGAGTTGGCTAGAAATTAATGGGAAAATCAGAACCCAAATGCTTTCTTCAAACACAAAATATGGAGCATTTCTTTTGGTGAAGATTTCAGAGAGAGCTTATGGATTGGATTTGATGCCAACTCAAGTTTCTGTTCAATTGGGAAATAACATTATTTCTGAAGCCTCTGTTTGGTTGCAACATAAAGATGAAAAGAAGCAAAATTTGGAGTGTTTGTTTTATGGGAATAGAAGGGAAAGAGCCAGAAGTTTAATGGTGGCTGATCATCAAGAAATTAGGGTTTTAAGAGAGAGAGAAGATGGTTGGTTGGAGATTGAATTAGGAGAATTTTTCAGTGGGGAAAATGATGAACAAATCAATATGAGTTTCATGGAAACCAAAGGCTTTCAACTCAAATCCGGACTTCTTATTCAAGGCATTCAAATCCGACCTAAAAATTGA

Coding sequence (CDS)

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTTTCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGAGAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGAGCTTTGAGATGGAAAGATTTTCGGGGAAAATAATTTACACATTGTCTGCAAGAGATTTGGCGATCACATGGAGCTCTGATCCACTCTGTTGGACCTGGAAATCTCATTCACAATCTAGATTTTCAGAAGTGGCAGAGCTTAGAACAGTGAGTTGGCTAGAAATTAATGGGAAAATCAGAACCCAAATGCTTTCTTCAAACACAAAATATGGAGCATTTCTTTTGGTGAAGATTTCAGAGAGAGCTTATGGATTGGATTTGATGCCAACTCAAGTTTCTGTTCAATTGGGAAATAACATTATTTCTGAAGCCTCTGTTTGGTTGCAACATAAAGATGAAAAGAAGCAAAATTTGGAGTGTTTGTTTTATGGGAATAGAAGGGAAAGAGCCAGAAGTTTAATGGTGGCTGATCATCAAGAAATTAGGGTTTTAAGAGAGAGAGAAGATGGTTGGTTGGAGATTGAATTAGGAGAATTTTTCAGTGGGGAAAATGATGAACAAATCAATATGAGTTTCATGGAAACCAAAGGCTTTCAACTCAAATCCGGACTTCTTATTCAAGGCATTCAAATCCGACCTAAAAATTGA

Protein sequence

MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLGNNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRPKN

Homology

[Close]

BLAST of HG10006380 vs. NCBI nr
Match: XP_038890670.1 (F-box protein PP2-B13-like [Benincasa hispida] >XP_038890713.1 F-box protein PP2-B13-like [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-124
Identity = 236/305 (77.38%), Postives = 257/305 (84.26%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGI SIGVL EDCVS ILSLT+PSD GKLSLVSS FRSAAESDVVWGRFLPKNY EILA
Sbjct: 1   MAGIWSIGVLAEDCVSTILSLTSPSDVGKLSLVSSVFRSAAESDVVWGRFLPKNYEEILA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           AS+ISGE PL SKREVF RLC PILLDGG+K FE++RF GKI YTLSAR+L ITWSSDPL
Sbjct: 61  ASDISGESPLKSKREVFLRLCCPILLDGGRKRFELDRFGGKISYTLSARELGITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WKSH QSRF EV ELRTVSWLEI GKIRTQM+SSNTKYGA+LL+KISERAYGLDLMP
Sbjct: 121 CWSWKSHPQSRFPEVVELRTVSWLEIKGKIRTQMVSSNTKYGAYLLLKISERAYGLDLMP 180

Query: 181 TQVSVQLG----------NNIISEASVWLQHK-DEKKQNLECLFYGNRRERARSLMVA-- 240
            QVS+QLG          NN I EA VWL HK DEKKQ+LE LFYGNRRERAR L +   
Sbjct: 181 AQVSLQLGNNNNNNNNNNNNNIREAYVWLHHKSDEKKQDLEYLFYGNRRERARKLALTSY 240

Query: 241 -------DHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGI 286
                  +++EIRVLREREDGWLEIELGEFFSGE+DE++NMSFMETKGFQLKSGL+IQ I
Sbjct: 241 NNNNNLENYKEIRVLREREDGWLEIELGEFFSGESDEEVNMSFMETKGFQLKSGLIIQAI 300

[Close]

BLAST of HG10006380 vs. NCBI nr
Match: XP_022156423.1 (F-box protein VBF-like [Momordica charantia])

HSP 1 Score: 439.5 bits (1129), Expect = 2.2e-119
Identity = 218/296 (73.65%), Postives = 257/296 (86.82%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGI SIG+LPEDCVS ILSLTTPSD G+LS+VSSAFRSAAESDVVWGRFLP NYA ILA
Sbjct: 1   MAGILSIGMLPEDCVSTILSLTTPSDVGRLSVVSSAFRSAAESDVVWGRFLPNNYAHILA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           A++ISGE P  SKRE+FFRLCSP+LLDGGKKS E+E+ S KI YTLSAR+L+I+WSSDPL
Sbjct: 61  AADISGESPFCSKREIFFRLCSPLLLDGGKKSLELEKISAKICYTLSARELSISWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WK+HS SRF+EVAELRTVSWLEI+GKIRT+ +SSNT YGA+LLVKIS+RAYGLDL+P
Sbjct: 121 CWSWKNHSHSRFAEVAELRTVSWLEISGKIRTKTVSSNTLYGAYLLVKISDRAYGLDLVP 180

Query: 181 TQVSVQLGNNI---ISEASVWLQHKDEKKQNLECLFYGNRRERARSLM-----VADHQEI 240
            QV VQ+G+     +SE SVWLQ KD+KK+++ECLFYGNRRER R L+     + ++  I
Sbjct: 181 AQVCVQVGDGAQAQVSEGSVWLQRKDKKKEDIECLFYGNRRERVRKLVGNGEKMEENGSI 240

Query: 241 RVLREREDGWLEIELGEFFSGEN--DEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           RVL+EREDGWLEIELGEFFSGEN  DE++ MS ME KGFQLK+GL++QGIQIRPK+
Sbjct: 241 RVLKEREDGWLEIELGEFFSGENGTDEEVKMSLMEIKGFQLKAGLVLQGIQIRPKH 296

[Close]

BLAST of HG10006380 vs. NCBI nr
Match: XP_008453983.1 (PREDICTED: F-box protein PP2-B13-like [Cucumis melo] >KAA0048041.1 F-box protein PP2-B13-like [Cucumis melo var. makuwa])

HSP 1 Score: 432.6 bits (1111), Expect = 2.7e-117
Identity = 225/299 (75.25%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           M  ISSIGVLPEDCVSAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MVAISSIGVLPEDCVSAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASEISGE PLSSKRE FFRLCSPIL++ GKKSFE+E+ SGKIIY LSAR+L ITWSSDPL
Sbjct: 61  ASEISGEAPLSSKREAFFRLCSPILVEEGKKSFELEKLSGKIIYMLSARELGITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WKSH QS+F EV ELRTVSWLEI G+IRT+MLS NTKYGA+LL  ISERAYGLDLMP
Sbjct: 121 CWSWKSHPQSKFPEVVELRTVSWLEIKGEIRTKMLSPNTKYGAYLLFNISERAYGLDLMP 180

Query: 181 TQVSVQL--------GNNIISEASVWLQHK---DEKKQNLECLFYGNRRERARSLMV--A 240
           TQ+S+QL         N+  SEA VWL  K    EK Q+LE L YGNRRERA  L+    
Sbjct: 181 TQLSLQLLPNNQPNNCNDNNSEAYVWLHRKHKHHEKNQSLESLLYGNRRERASKLLQNHL 240

Query: 241 DHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           +++E RVL EREDGWLEIELGEFF+ + DEQ++MSFMETKGFQLKSGLLIQGIQIRPK+
Sbjct: 241 ENKEFRVLSEREDGWLEIELGEFFTTQKDEQVHMSFMETKGFQLKSGLLIQGIQIRPKH 299

[Close]

BLAST of HG10006380 vs. NCBI nr
Match: XP_004144818.3 (F-box protein PP2-B15 [Cucumis sativus] >KGN61001.2 hypothetical protein Csa_021340 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.7e-117
Identity = 223/303 (73.60%), Postives = 252/303 (83.17%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGISSIGVLPEDC+SAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MAGISSIGVLPEDCISAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASE+SGE PL SKRE FFRLCSPIL+D GKKSFE+E+ SGK+IY LSAR+L+ITWSSDPL
Sbjct: 61  ASELSGEAPLRSKREAFFRLCSPILVDEGKKSFELEKLSGKVIYMLSARELSITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CWTWKSH QS F EV ELRTVSWLEINGKIRT+ LS NTKYGA+LL KISERAYGL+LMP
Sbjct: 121 CWTWKSHPQSTFPEVVELRTVSWLEINGKIRTKTLSPNTKYGAYLLFKISERAYGLELMP 180

Query: 181 TQVSVQL------------GNNIISEASVWLQHK--DEKKQ-NLECLFYGNRRERARSLM 240
            Q+S+QL             N+  SEA VWL HK  D+  Q NLE L YGNRRERA   +
Sbjct: 181 AQLSLQLFPINQPNTNNYNNNHNNSEAYVWLHHKHHDQNNQSNLESLLYGNRRERATKFI 240

Query: 241 V--ADHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIR 287
                ++E RVL +REDGWLE+ELGEFF+ +ND+Q++MSFMETKGFQLKSGLLIQGIQIR
Sbjct: 241 QNHVQNKEFRVLNQREDGWLEVELGEFFTTQNDQQLHMSFMETKGFQLKSGLLIQGIQIR 300

[Close]

BLAST of HG10006380 vs. NCBI nr
Match: TYJ96495.1 (F-box protein PP2-B13-like [Cucumis melo var. makuwa])

HSP 1 Score: 431.4 bits (1108), Expect = 6.0e-117
Identity = 224/299 (74.92%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           M  ISSIGVLPEDCVSAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MVAISSIGVLPEDCVSAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASEISGE PLSSKRE FFRLCSPIL++ GKKSFE+E+ SGKIIY LSAR+L ITWSSDPL
Sbjct: 61  ASEISGEAPLSSKREAFFRLCSPILVEEGKKSFELEKLSGKIIYMLSARELGITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WKSH QS+F EV ELRTVSWLEI G+IRT+MLS NTKYGA+LL  ISERAYGLDLMP
Sbjct: 121 CWSWKSHPQSKFPEVVELRTVSWLEIKGEIRTKMLSPNTKYGAYLLFNISERAYGLDLMP 180

Query: 181 TQVSVQL--------GNNIISEASVWLQHK---DEKKQNLECLFYGNRRERARSLMV--A 240
           TQ+S+QL         N+  SE+ VWL  K    EK Q+LE L YGNRRERA  L+    
Sbjct: 181 TQLSLQLLPNNQPNNCNDNNSESYVWLHRKHKHHEKNQSLESLLYGNRRERASKLLQNHL 240

Query: 241 DHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           +++E RVL EREDGWLEIELGEFF+ + DEQ++MSFMETKGFQLKSGLLIQGIQIRPK+
Sbjct: 241 ENKEFRVLSEREDGWLEIELGEFFTTQKDEQVHMSFMETKGFQLKSGLLIQGIQIRPKH 299

[Close]

BLAST of HG10006380 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 5.4e-68
Identity = 135/285 (47.37%), Postives = 187/285 (65.61%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2   MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
             SSK+E++  LC  IL+D G+K F++E+ SGKI Y LS+RDL+ITWS     W+W   S
Sbjct: 62  -FSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRS 121

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE  +L    WLEI GKI+T  LS NT YGA+L++K++ RAYGLDL+P + S+++G
Sbjct: 122 DSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVG 181

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLRE----REDGWLE 248
           N      S +L   D KKQ +E +FYG R +R     +A H+ +R  R     R+DGW+E
Sbjct: 182 NGEKKIKSTYLSCLDNKKQQMERVFYGQREQR-----MATHEVVRSHRREPEVRDDGWME 241

Query: 249 IELGEFFS----GENDEQINMSFMETKGFQLKSGLLIQGIQIRPK 286
           IELGEF +    G++D+++ MS  E KG+QLK G+ I GI++RPK
Sbjct: 242 IELGEFETGSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPK 280

[Close]

BLAST of HG10006380 vs. ExPASy Swiss-Prot
Match: Q9C7K0 (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.0e-68
Identity = 134/280 (47.86%), Postives = 194/280 (69.29%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3   MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
            +SSK+E++  LC  +L+D  +K F++ +FSGKI Y LSARD++IT S     W+W + S
Sbjct: 63  NISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVS 122

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE AEL     LEI GKI+T++LS+NT+YGA+L+VK+++ AYGLDL+P + S++  
Sbjct: 123 DSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSK 182

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLM--VADHQEIRVLREREDGWLEIE 248
           N  IS+++ +L   DEKKQ ++ LFYGNR ER    +  V    + R  + R+DGW+EIE
Sbjct: 183 NGQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIE 242

Query: 249 LGEFFSGE-NDEQINMSFMETKGFQLKSGLLIQGIQIRPK 286
           LGEF + E  D+++NM+  E KG+QLK G+LI GI++RPK
Sbjct: 243 LGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281

[Close]

BLAST of HG10006380 vs. ExPASy Swiss-Prot
Match: Q9C7J9 (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-65
Identity = 134/279 (48.03%), Postives = 188/279 (67.38%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE CV+ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3   MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
             SSK+E++  LC  +L+D  +K F++ +FSGKI Y LSARD++IT+S      +W + S
Sbjct: 63  -FSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVS 122

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE AEL T   LEI GKI+T +LS NTKYGA+L++K++  AYGLDL+P + SV+  
Sbjct: 123 DSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSK 182

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLM--VADHQEIRVLREREDGWLEIE 248
           N   ++ + +L   DEKKQ ++ LFYGNR ER    +  V    + R  + R+DGWLEIE
Sbjct: 183 NGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIE 242

Query: 249 LGEFFSGE-NDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           LGEF + E  D+++NMS  E KG+QLK G++I GI++RP
Sbjct: 243 LGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280

[Close]

BLAST of HG10006380 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-52
Identity = 114/283 (40.28%), Postives = 165/283 (58.30%), Query Frame = 0


Query: 3   GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  EISGECPLSSKREVFFRLC-SPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLC 122
            +      +SK+E++F LC +P+L++ GKKSF +E+ SGK    LS+++L ITW S P  
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEY 176

Query: 123 WTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPT 182
           W W S  +SRF+++AEL  V W EI GK   ++LS  T+Y A+++ K  +R  GL  +P 
Sbjct: 177 WQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPV 236

Query: 183 QVSVQLGNNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLREREDG 242
           +V + L     S+  ++              F G R  R R     + +++    +REDG
Sbjct: 237 EVGLGLVGQESSKRFIY--------------FIGPRDRRGR----RETRDVTKPDQREDG 296

Query: 243 WLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           W+E ELGEFF+ E  ++I  S +E K    KSGL+IQGI+ RP
Sbjct: 297 WMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of HG10006380 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.8e-47
Identity = 112/279 (40.14%), Postives = 160/279 (57.35%), Query Frame = 0


Query: 11  PEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPL 70
           PEDC+S I+S T P DA   + VS  F S  +SD++W +FLP +Y  ++  S +      
Sbjct: 18  PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRV-----F 77

Query: 71  SSKREVFFRLCS-PILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHSQ 130
           SSK+E++F LC+ P+L D  KKS  +E+ SGK    LSA +L+I W  +P  W W    +
Sbjct: 78  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 137

Query: 131 SRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLGN 190
           SRF +VA+LR V W EI G+  T++LS  T+Y A+++ K  ++ YG              
Sbjct: 138 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGF------------Q 197

Query: 191 NIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLREREDGWLEIELGE 250
           N+  EA+V +  + E  + L C     RR R         + +   ++REDGW+EIELGE
Sbjct: 198 NVAIEAAVGVVGQ-EPSRRLICFSEAIRRGR---------RNVVKPKQREDGWMEIELGE 257

Query: 251 FFSG----ENDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           FF+     +NDE I MS +ETK    K GL+IQGI+IRP
Sbjct: 258 FFNDGGIMDNDE-IEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of HG10006380 vs. ExPASy TrEMBL
Match: A0A6J1DQK9 (F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023316 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 218/296 (73.65%), Postives = 257/296 (86.82%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGI SIG+LPEDCVS ILSLTTPSD G+LS+VSSAFRSAAESDVVWGRFLP NYA ILA
Sbjct: 1   MAGILSIGMLPEDCVSTILSLTTPSDVGRLSVVSSAFRSAAESDVVWGRFLPNNYAHILA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           A++ISGE P  SKRE+FFRLCSP+LLDGGKKS E+E+ S KI YTLSAR+L+I+WSSDPL
Sbjct: 61  AADISGESPFCSKREIFFRLCSPLLLDGGKKSLELEKISAKICYTLSARELSISWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WK+HS SRF+EVAELRTVSWLEI+GKIRT+ +SSNT YGA+LLVKIS+RAYGLDL+P
Sbjct: 121 CWSWKNHSHSRFAEVAELRTVSWLEISGKIRTKTVSSNTLYGAYLLVKISDRAYGLDLVP 180

Query: 181 TQVSVQLGNNI---ISEASVWLQHKDEKKQNLECLFYGNRRERARSLM-----VADHQEI 240
            QV VQ+G+     +SE SVWLQ KD+KK+++ECLFYGNRRER R L+     + ++  I
Sbjct: 181 AQVCVQVGDGAQAQVSEGSVWLQRKDKKKEDIECLFYGNRRERVRKLVGNGEKMEENGSI 240

Query: 241 RVLREREDGWLEIELGEFFSGEN--DEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           RVL+EREDGWLEIELGEFFSGEN  DE++ MS ME KGFQLK+GL++QGIQIRPK+
Sbjct: 241 RVLKEREDGWLEIELGEFFSGENGTDEEVKMSLMEIKGFQLKAGLVLQGIQIRPKH 296

[Close]

BLAST of HG10006380 vs. ExPASy TrEMBL
Match: A0A5A7U3A9 (F-box protein PP2-B13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001090 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.3e-117
Identity = 225/299 (75.25%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           M  ISSIGVLPEDCVSAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MVAISSIGVLPEDCVSAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASEISGE PLSSKRE FFRLCSPIL++ GKKSFE+E+ SGKIIY LSAR+L ITWSSDPL
Sbjct: 61  ASEISGEAPLSSKREAFFRLCSPILVEEGKKSFELEKLSGKIIYMLSARELGITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WKSH QS+F EV ELRTVSWLEI G+IRT+MLS NTKYGA+LL  ISERAYGLDLMP
Sbjct: 121 CWSWKSHPQSKFPEVVELRTVSWLEIKGEIRTKMLSPNTKYGAYLLFNISERAYGLDLMP 180

Query: 181 TQVSVQL--------GNNIISEASVWLQHK---DEKKQNLECLFYGNRRERARSLMV--A 240
           TQ+S+QL         N+  SEA VWL  K    EK Q+LE L YGNRRERA  L+    
Sbjct: 181 TQLSLQLLPNNQPNNCNDNNSEAYVWLHRKHKHHEKNQSLESLLYGNRRERASKLLQNHL 240

Query: 241 DHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           +++E RVL EREDGWLEIELGEFF+ + DEQ++MSFMETKGFQLKSGLLIQGIQIRPK+
Sbjct: 241 ENKEFRVLSEREDGWLEIELGEFFTTQKDEQVHMSFMETKGFQLKSGLLIQGIQIRPKH 299

[Close]

BLAST of HG10006380 vs. ExPASy TrEMBL
Match: A0A1S3BXK2 (F-box protein PP2-B13-like OS=Cucumis melo OX=3656 GN=LOC103494539 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.3e-117
Identity = 225/299 (75.25%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           M  ISSIGVLPEDCVSAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MVAISSIGVLPEDCVSAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASEISGE PLSSKRE FFRLCSPIL++ GKKSFE+E+ SGKIIY LSAR+L ITWSSDPL
Sbjct: 61  ASEISGEAPLSSKREAFFRLCSPILVEEGKKSFELEKLSGKIIYMLSARELGITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CW+WKSH QS+F EV ELRTVSWLEI G+IRT+MLS NTKYGA+LL  ISERAYGLDLMP
Sbjct: 121 CWSWKSHPQSKFPEVVELRTVSWLEIKGEIRTKMLSPNTKYGAYLLFNISERAYGLDLMP 180

Query: 181 TQVSVQL--------GNNIISEASVWLQHK---DEKKQNLECLFYGNRRERARSLMV--A 240
           TQ+S+QL         N+  SEA VWL  K    EK Q+LE L YGNRRERA  L+    
Sbjct: 181 TQLSLQLLPNNQPNNCNDNNSEAYVWLHRKHKHHEKNQSLESLLYGNRRERASKLLQNHL 240

Query: 241 DHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRPKN 287
           +++E RVL EREDGWLEIELGEFF+ + DEQ++MSFMETKGFQLKSGLLIQGIQIRPK+
Sbjct: 241 ENKEFRVLSEREDGWLEIELGEFFTTQKDEQVHMSFMETKGFQLKSGLLIQGIQIRPKH 299

[Close]

BLAST of HG10006380 vs. ExPASy TrEMBL
Match: A0A0A0LLX5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032230 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.7e-117
Identity = 223/303 (73.60%), Postives = 252/303 (83.17%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGISSIGVLPEDC+SAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MAGISSIGVLPEDCISAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASE+SGE PL SKRE FFRLCSPIL+D GKKSFE+E+ SGK+IY LSAR+L+ITWSSDPL
Sbjct: 61  ASEMSGEAPLRSKREAFFRLCSPILVDEGKKSFELEKLSGKVIYMLSARELSITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CWTWKSH QS F EV ELRTVSWLEINGKIRT+ LS NTKYGA+LL KISERAYGL+LMP
Sbjct: 121 CWTWKSHPQSTFPEVVELRTVSWLEINGKIRTKTLSPNTKYGAYLLFKISERAYGLELMP 180

Query: 181 TQVSVQL------------GNNIISEASVWLQHK--DEKKQ-NLECLFYGNRRERARSLM 240
            Q+S+QL             N+  SEA VWL HK  D+  Q NLE L YGNRRERA   +
Sbjct: 181 AQLSLQLFPINQPNTNNYNNNHNNSEAYVWLHHKHHDQNNQSNLESLLYGNRRERATKFI 240

Query: 241 V--ADHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIR 287
                ++E RVL +REDGWLE+ELGEFF+ +ND+Q++MSFMETKGFQLKSGLLIQGIQIR
Sbjct: 241 QNHVQNKEFRVLNQREDGWLEVELGEFFTTQNDQQLHMSFMETKGFQLKSGLLIQGIQIR 300

[Close]

BLAST of HG10006380 vs. ExPASy TrEMBL
Match: A0A0A0LJT8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032730 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.2e-117
Identity = 223/303 (73.60%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILA 60
           MAGISSIGVLPEDCVSAILSLT+PSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+A
Sbjct: 1   MAGISSIGVLPEDCVSAILSLTSPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61  ASEISGECPLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPL 120
           ASE+SGE PL SKRE FFRLCSPIL+D GKKSFE+E+ SGK+IY LSAR+L+ITWSSDPL
Sbjct: 61  ASEMSGEAPLRSKREAFFRLCSPILVDEGKKSFELEKLSGKVIYMLSARELSITWSSDPL 120

Query: 121 CWTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMP 180
           CWTWKSH QS F EV ELRTVSWLEINGKIRT+MLS NTKYGA+LL KISERAYGL+LMP
Sbjct: 121 CWTWKSHPQSTFPEVVELRTVSWLEINGKIRTKMLSPNTKYGAYLLFKISERAYGLELMP 180

Query: 181 TQVSVQL------------GNNIISEASVWLQHK--DEKKQ-NLECLFYGNRRERARSLM 240
            Q+S+QL             N+  SEA VWL HK  D+  Q NLE L YGNRRERA   +
Sbjct: 181 AQLSLQLFPINQPNTNSSNNNHNNSEAYVWLHHKHHDQNNQSNLESLLYGNRRERATKFI 240

Query: 241 V--ADHQEIRVLREREDGWLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIR 287
                ++E RVL +REDGWLE+ELGEFF+ +ND+Q++MSFMET+GFQLKSGLLIQGIQIR
Sbjct: 241 QNHVQNKEFRVLNQREDGWLEVELGEFFTTQNDQQLHMSFMETEGFQLKSGLLIQGIQIR 300

[Close]

BLAST of HG10006380 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-69
Identity = 135/285 (47.37%), Postives = 187/285 (65.61%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2   MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
             SSK+E++  LC  IL+D G+K F++E+ SGKI Y LS+RDL+ITWS     W+W   S
Sbjct: 62  -FSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRS 121

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE  +L    WLEI GKI+T  LS NT YGA+L++K++ RAYGLDL+P + S+++G
Sbjct: 122 DSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVG 181

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLRE----REDGWLE 248
           N      S +L   D KKQ +E +FYG R +R     +A H+ +R  R     R+DGW+E
Sbjct: 182 NGEKKIKSTYLSCLDNKKQQMERVFYGQREQR-----MATHEVVRSHRREPEVRDDGWME 241

Query: 249 IELGEFFS----GENDEQINMSFMETKGFQLKSGLLIQGIQIRPK 286
           IELGEF +    G++D+++ MS  E KG+QLK G+ I GI++RPK
Sbjct: 242 IELGEFETGSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPK 280

[Close]

BLAST of HG10006380 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 258.8 bits (660), Expect = 5.0e-69
Identity = 134/280 (47.86%), Postives = 194/280 (69.29%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3   MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
            +SSK+E++  LC  +L+D  +K F++ +FSGKI Y LSARD++IT S     W+W + S
Sbjct: 63  NISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVS 122

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE AEL     LEI GKI+T++LS+NT+YGA+L+VK+++ AYGLDL+P + S++  
Sbjct: 123 DSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSK 182

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLM--VADHQEIRVLREREDGWLEIE 248
           N  IS+++ +L   DEKKQ ++ LFYGNR ER    +  V    + R  + R+DGW+EIE
Sbjct: 183 NGQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIE 242

Query: 249 LGEFFSGE-NDEQINMSFMETKGFQLKSGLLIQGIQIRPK 286
           LGEF + E  D+++NM+  E KG+QLK G+LI GI++RPK
Sbjct: 243 LGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281

[Close]

BLAST of HG10006380 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 134/279 (48.03%), Postives = 188/279 (67.38%), Query Frame = 0


Query: 9   VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGEC 68
           +LPE CV+ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S      
Sbjct: 3   MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 69  PLSSKREVFFRLCSPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHS 128
             SSK+E++  LC  +L+D  +K F++ +FSGKI Y LSARD++IT+S      +W + S
Sbjct: 63  -FSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVS 122

Query: 129 QSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLG 188
            SRFSE AEL T   LEI GKI+T +LS NTKYGA+L++K++  AYGLDL+P + SV+  
Sbjct: 123 DSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSK 182

Query: 189 NNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLM--VADHQEIRVLREREDGWLEIE 248
           N   ++ + +L   DEKKQ ++ LFYGNR ER    +  V    + R  + R+DGWLEIE
Sbjct: 183 NGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIE 242

Query: 249 LGEFFSGE-NDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           LGEF + E  D+++NMS  E KG+QLK G++I GI++RP
Sbjct: 243 LGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280

[Close]

BLAST of HG10006380 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 206.1 bits (523), Expect = 3.8e-53
Identity = 114/283 (40.28%), Postives = 165/283 (58.30%), Query Frame = 0


Query: 3   GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  EISGECPLSSKREVFFRLC-SPILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLC 122
            +      +SK+E++F LC +P+L++ GKKSF +E+ SGK    LS+++L ITW S P  
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEY 176

Query: 123 WTWKSHSQSRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPT 182
           W W S  +SRF+++AEL  V W EI GK   ++LS  T+Y A+++ K  +R  GL  +P 
Sbjct: 177 WQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPV 236

Query: 183 QVSVQLGNNIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLREREDG 242
           +V + L     S+  ++              F G R  R R     + +++    +REDG
Sbjct: 237 EVGLGLVGQESSKRFIY--------------FIGPRDRRGR----RETRDVTKPDQREDG 296

Query: 243 WLEIELGEFFSGENDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           W+E ELGEFF+ E  ++I  S +E K    KSGL+IQGI+ RP
Sbjct: 297 WMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of HG10006380 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-48
Identity = 112/279 (40.14%), Postives = 160/279 (57.35%), Query Frame = 0


Query: 11  PEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPL 70
           PEDC+S I+S T P DA   + VS  F S  +SD++W +FLP +Y  ++  S +      
Sbjct: 18  PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRV-----F 77

Query: 71  SSKREVFFRLCS-PILLDGGKKSFEMERFSGKIIYTLSARDLAITWSSDPLCWTWKSHSQ 130
           SSK+E++F LC+ P+L D  KKS  +E+ SGK    LSA +L+I W  +P  W W    +
Sbjct: 78  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 137

Query: 131 SRFSEVAELRTVSWLEINGKIRTQMLSSNTKYGAFLLVKISERAYGLDLMPTQVSVQLGN 190
           SRF +VA+LR V W EI G+  T++LS  T+Y A+++ K  ++ YG              
Sbjct: 138 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGF------------Q 197

Query: 191 NIISEASVWLQHKDEKKQNLECLFYGNRRERARSLMVADHQEIRVLREREDGWLEIELGE 250
           N+  EA+V +  + E  + L C     RR R         + +   ++REDGW+EIELGE
Sbjct: 198 NVAIEAAVGVVGQ-EPSRRLICFSEAIRRGR---------RNVVKPKQREDGWMEIELGE 257

Query: 251 FFSG----ENDEQINMSFMETKGFQLKSGLLIQGIQIRP 285
           FF+     +NDE I MS +ETK    K GL+IQGI+IRP
Sbjct: 258 FFNDGGIMDNDE-IEMSALETKQLNRKCGLIIQGIEIRP 268

The following BLAST results are available for this feature:

BLAST of HG10006380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890670.1	1.0e-124	77.38	F-box protein PP2-B13-like [Benincasa hispida] >XP_038890713.1 F-box protein PP2...	[more]
XP_022156423.1	2.2e-119	73.65	F-box protein VBF-like [Momordica charantia]	[more]
XP_008453983.1	2.7e-117	75.25	PREDICTED: F-box protein PP2-B13-like [Cucumis melo] >KAA0048041.1 F-box protein...	[more]
XP_004144818.3	2.7e-117	73.60	F-box protein PP2-B15 [Cucumis sativus] >KGN61001.2 hypothetical protein Csa_021...	[more]
TYJ96495.1	6.0e-117	74.92	F-box protein PP2-B13-like [Cucumis melo var. makuwa]	[more]

BLAST of HG10006380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80494	5.4e-68	47.37	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]
Q9C7K0	7.0e-68	47.86	F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1	[more]
Q9C7J9	1.9e-65	48.03	F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1	[more]
Q3E6P4	5.4e-52	40.28	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ6	1.8e-47	40.14	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]

BLAST of HG10006380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQK9	1.1e-119	73.65	F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023316 PE=4 SV=1	[more]
A0A5A7U3A9	1.3e-117	75.25	F-box protein PP2-B13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BXK2	1.3e-117	75.25	F-box protein PP2-B13-like OS=Cucumis melo OX=3656 GN=LOC103494539 PE=4 SV=1	[more]
A0A0A0LLX5	1.7e-117	73.60	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032230 PE=4 ...	[more]
A0A0A0LJT8	2.2e-117	73.60	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032730 PE=4 ...	[more]

BLAST of HG10006380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09155.1	3.8e-69	47.37	phloem protein 2-B15	[more]
AT1G56250.1	5.0e-69	47.86	phloem protein 2-B14	[more]
AT1G56240.1	1.4e-66	48.03	phloem protein 2-B13	[more]
AT2G02240.1	3.8e-53	40.28	F-box family protein	[more]
AT2G02360.1	1.3e-48	40.14	phloem protein 2-B10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 103..284 e-value: 1.0E-48 score: 165.1
None	No IPR available	PANTHER	PTHR32278:SF15	F-BOX PROTEIN PP2-B10-LIKE	coord: 9..285
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 9..285
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 4..50 score: 9.02057
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006380.1	HG10006380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding