HG10006373 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006373
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Wall-associated receptor kinase-like 20
Location	Chr07: 17789041 .. 17789673 (+)
RNA-Seq Expression	HG10006373
Synteny	HG10006373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATATCAAGAAGACCATGTTTTTTATATTTGCTCTCTTTTTTCAAGTATCTAAAGCAATAGCTTTTCCGGCTTGTTCCAAATGTGGAAATCTTGAAGTTCCTTATCCGCTTAGCACAAACGACAACTGTGGAGACTCTAGGTATAAAGTTTATTGCCATGATGATATTCTTCAGTTCAAGTCAAGTGAAGGGTTTTACTATAATATTCATTCCATTGATCCTAATGCTTATAAGCTTATTATAAGCCCACCCCAAATTCAGAAAGAGAGTTGTTACTCTTCTGATCTCTCTTTAGGAGGTTTAAGGCTAGATGAAAATTTGCCTTTCAACGTTTCTACACACAATACTGTCATGCTGTTCAATTGCTCAGATAATCTTATAAACTCGCCCCTGAATTGTTCAATAAGCAGCCCTTGCAGGCAGTTTGAGGAGAAAATGAAGGAAGCAAGTGGGTGCAAGAACACCCTTTGCTGTACGTACTTGAAAGATTCAGCCATGACTGCCCACATGATAAGAGTCAGAATTGGAGGGTGCACTGCTTATACTTCTGTGGTCAATTTTAAGCCTGGCGATTCATTTGAAACCTGGAATTATGGAATTGAATTGCAATGGATCCCCCCAAACTAG

mRNA sequence

ATGAAGAATATCAAGAAGACCATGTTTTTTATATTTGCTCTCTTTTTTCAAGTATCTAAAGCAATAGCTTTTCCGGCTTGTTCCAAATGTGGAAATCTTGAAGTTCCTTATCCGCTTAGCACAAACGACAACTGTGGAGACTCTAGGTATAAAGTTTATTGCCATGATGATATTCTTCAGTTCAAGTCAAGTGAAGGGTTTTACTATAATATTCATTCCATTGATCCTAATGCTTATAAGCTTATTATAAGCCCACCCCAAATTCAGAAAGAGAGTTGTTACTCTTCTGATCTCTCTTTAGGAGGTTTAAGGCTAGATGAAAATTTGCCTTTCAACGTTTCTACACACAATACTGTCATGCTGTTCAATTGCTCAGATAATCTTATAAACTCGCCCCTGAATTGTTCAATAAGCAGCCCTTGCAGGCAGTTTGAGGAGAAAATGAAGGAAGCAAGTGGGTGCAAGAACACCCTTTGCTGTACGTACTTGAAAGATTCAGCCATGACTGCCCACATGATAAGAGTCAGAATTGGAGGGTGCACTGCTTATACTTCTGTGGTCAATTTTAAGCCTGGCGATTCATTTGAAACCTGGAATTATGGAATTGAATTGCAATGGATCCCCCCAAACTAG

Coding sequence (CDS)

ATGAAGAATATCAAGAAGACCATGTTTTTTATATTTGCTCTCTTTTTTCAAGTATCTAAAGCAATAGCTTTTCCGGCTTGTTCCAAATGTGGAAATCTTGAAGTTCCTTATCCGCTTAGCACAAACGACAACTGTGGAGACTCTAGGTATAAAGTTTATTGCCATGATGATATTCTTCAGTTCAAGTCAAGTGAAGGGTTTTACTATAATATTCATTCCATTGATCCTAATGCTTATAAGCTTATTATAAGCCCACCCCAAATTCAGAAAGAGAGTTGTTACTCTTCTGATCTCTCTTTAGGAGGTTTAAGGCTAGATGAAAATTTGCCTTTCAACGTTTCTACACACAATACTGTCATGCTGTTCAATTGCTCAGATAATCTTATAAACTCGCCCCTGAATTGTTCAATAAGCAGCCCTTGCAGGCAGTTTGAGGAGAAAATGAAGGAAGCAAGTGGGTGCAAGAACACCCTTTGCTGTACGTACTTGAAAGATTCAGCCATGACTGCCCACATGATAAGAGTCAGAATTGGAGGGTGCACTGCTTATACTTCTGTGGTCAATTTTAAGCCTGGCGATTCATTTGAAACCTGGAATTATGGAATTGAATTGCAATGGATCCCCCCAAACTAG

Protein sequence

MKNIKKTMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGDSFETWNYGIELQWIPPN

Homology

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BLAST of HG10006373 vs. NCBI nr
Match: KAA0048047.1 (wall-associated receptor kinase-like 20 [Cucumis melo var. makuwa])

HSP 1 Score: 404.4 bits (1038), Expect = 5.8e-109
Identity = 189/203 (93.10%), Postives = 197/203 (97.04%), Query Frame = 0


Query: 8   MFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGF 67
           MFFIFALFFQ+SKAIAF ACSKCGNLEVPYPLSTNDNCGDSRYKVYC+ DILQFKSSEGF
Sbjct: 1   MFFIFALFFQLSKAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVYCNGDILQFKSSEGF 60

Query: 68  YYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDN 127
           YYNIHSIDPNAYKLIISPP+IQK SC+SSDLSLGGLRLDENLPFNVSTHNTVML NCS+N
Sbjct: 61  YYNIHSIDPNAYKLIISPPEIQKGSCFSSDLSLGGLRLDENLPFNVSTHNTVMLLNCSNN 120

Query: 128 LINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 187
           LINSPLNCSI+SPCRQFEEK+KE+SGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV
Sbjct: 121 LINSPLNCSINSPCRQFEEKIKESSGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 180

Query: 188 NFKPGDSFETWNYGIELQWIPPN 211
           NFKPGDS ETW YGIELQWIPPN
Sbjct: 181 NFKPGDSVETWKYGIELQWIPPN 203

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BLAST of HG10006373 vs. NCBI nr
Match: TYJ96489.1 (wall-associated receptor kinase-like 20 [Cucumis melo var. makuwa])

HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108
Identity = 188/203 (92.61%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 8   MFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGF 67
           MFFIFALFFQ+SKAIAF ACSKCGNLEVPYPLSTNDNCGDSRYKVYC+ DILQFKSSEGF
Sbjct: 1   MFFIFALFFQLSKAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVYCNGDILQFKSSEGF 60

Query: 68  YYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDN 127
           YYNIHSIDPNAYKLIISPP+IQK SC+SSDLSLGGLRLDENLPFNVSTH TVML NCS+N
Sbjct: 61  YYNIHSIDPNAYKLIISPPEIQKGSCFSSDLSLGGLRLDENLPFNVSTHKTVMLLNCSNN 120

Query: 128 LINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 187
           LINSPLNCSI+SPCRQFEEK+KE+SGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV
Sbjct: 121 LINSPLNCSINSPCRQFEEKIKESSGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 180

Query: 188 NFKPGDSFETWNYGIELQWIPPN 211
           NFKPGDS ETW YGIELQWIPPN
Sbjct: 181 NFKPGDSVETWKYGIELQWIPPN 203

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BLAST of HG10006373 vs. NCBI nr
Match: XP_022156422.1 (wall-associated receptor kinase-like 20 [Momordica charantia])

HSP 1 Score: 384.0 bits (985), Expect = 8.1e-103
Identity = 176/210 (83.81%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 1   MKNIKKTMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQ 60
           MKNI KTM  IFALFF VSKA+   +C KCGNLEVPYPLSTNDNCGDSRY++YC+D ILQ
Sbjct: 1   MKNINKTMLLIFALFFHVSKALVCHSCPKCGNLEVPYPLSTNDNCGDSRYRIYCYDGILQ 60

Query: 61  FKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVM 120
           FKSS GFYYNIHSIDP+AYKLII PPQI+++SCYSSDLSLGGLRLDE+LPFN+ST NTVM
Sbjct: 61  FKSSGGFYYNIHSIDPDAYKLIIRPPQIKRKSCYSSDLSLGGLRLDEHLPFNISTQNTVM 120

Query: 121 LFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGC 180
           L NCSDNLINSPLNCS +S CRQFEEKM+E+SGCKNTLCCTYLKDSAMT+HMIRVRIGGC
Sbjct: 121 LLNCSDNLINSPLNCSTNSLCRQFEEKMEESSGCKNTLCCTYLKDSAMTSHMIRVRIGGC 180

Query: 181 TAYTSVVNFKPGDSFETWNYGIELQWIPPN 211
           TAYT+VVN KPGD FETWNYGIELQW+PPN
Sbjct: 181 TAYTAVVNLKPGDPFETWNYGIELQWVPPN 210

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BLAST of HG10006373 vs. NCBI nr
Match: KAE8651620.1 (hypothetical protein Csa_021145 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 9.9e-101
Identity = 176/192 (91.67%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 19  SKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGFYYNIHSIDPNA 78
           S AIAF ACSKCGNLEVPYPLSTNDNCGDSRYKV+C+DDILQFKSSEGFYYNIHSIDPNA
Sbjct: 24  SIAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVHCNDDILQFKSSEGFYYNIHSIDPNA 83

Query: 79  YKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDNLINSPLNCSIS 138
           YKLIISPP+IQ   C+SSDLSLGGLRLDENLPFNVSTHNTVML NCS+NLINSPLNCSI+
Sbjct: 84  YKLIISPPEIQNGRCFSSDLSLGGLRLDENLPFNVSTHNTVMLLNCSNNLINSPLNCSIN 143

Query: 139 SPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGDSFETW 198
           SPCRQFEEKM EASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGD  ETW
Sbjct: 144 SPCRQFEEKMIEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGDPVETW 203

Query: 199 NYGIELQWIPPN 211
            YGIELQWIPPN
Sbjct: 204 KYGIELQWIPPN 215

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BLAST of HG10006373 vs. NCBI nr
Match: XP_022999379.1 (wall-associated receptor kinase-like 20 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 175/211 (82.94%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 1   MKNIKKTMFFIFALFFQVSK-AIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDIL 60
           MKNI  TMFFIF LFF+ SK AIAFPAC KCG+LEVP+PLSTN NCGDSRYKVYC   IL
Sbjct: 1   MKNIMNTMFFIFPLFFEASKAAIAFPACPKCGDLEVPFPLSTNGNCGDSRYKVYCRHGIL 60

Query: 61  QFKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTV 120
           QFKSS GFYYN+HSID NA KLIISPPQI K SC SSDL LGGLRLDE+LPFN+STHNTV
Sbjct: 61  QFKSSGGFYYNVHSIDANASKLIISPPQINKGSCSSSDLYLGGLRLDESLPFNISTHNTV 120

Query: 121 MLFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGG 180
           ML NCSDNL+ SPLNCS++SPCRQFEEK +EA+GCK+TLCCTYLKDSAMTAHMIRVR+GG
Sbjct: 121 MLLNCSDNLVFSPLNCSLNSPCRQFEEKTEEANGCKDTLCCTYLKDSAMTAHMIRVRVGG 180

Query: 181 CTAYTSVVNFKPGDSFETWNYGIELQWIPPN 211
           CTAYTSVVNFK GDS ETWNYGIELQWI PN
Sbjct: 181 CTAYTSVVNFKGGDSIETWNYGIELQWISPN 211

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BLAST of HG10006373 vs. ExPASy Swiss-Prot
Match: Q9LZM4 (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-34
Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 25  PACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGFYYNIHSIDPNAYKLIIS 84
           P C  CG + VPYPLST   CGD  Y++ C    L F +  G  Y I SI+    ++++ 
Sbjct: 41  PRCPNCGPMVVPYPLSTGPTCGDQAYRINCVGGKLYFGALHGSSYVITSINSVTQRIVLR 100

Query: 85  PPQIQKE-SCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDNLINSPLNCSISSPCRQ 144
           PP +    SC S+D+S  GL LD +LPF++++ NT++L NCS  ++ +P++CS +S C  
Sbjct: 101 PPGLASSVSCISADVSKQGLELDPHLPFSITSSNTILLLNCSQAMLQAPIDCSPTSLCYS 160

Query: 145 FEEKMKEASGC-KNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGDSF----ETW 204
           + +    AS C K  LCCT+  D + TA+ IR+  GGC AY S V   P        + W
Sbjct: 161 YIK--NNASPCSKAPLCCTFRTDGSQTAYTIRINGGGCLAYQSFVGLNPNKEVPPPGKKW 220

Query: 205 -NYGIELQWIPP 210
            + G+ELQW  P
Sbjct: 221 PDTGLELQWALP 230

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BLAST of HG10006373 vs. ExPASy Swiss-Prot
Match: Q9M342 (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana OX=3702 GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 7   TMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHD-DILQFKSSE 66
           T F +  L +  S   AF  C  CG+  VPYPLST  +CGD  Y++ C +   L F +  
Sbjct: 9   TTFTLSLLIYFSSTTQAFKRCPNCGSTRVPYPLSTGLDCGDPGYRIRCDNYGSLWFDTLN 68

Query: 67  GFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCS 126
           G    I +IDP+  + ++ PP  ++  C S D+   G++LD NLPFNVS  NTV++ NC+
Sbjct: 69  GSTNPIKTIDPSGQRFVLRPPGFEQNKCVSVDIKYHGIQLDLNLPFNVSCSNTVIIMNCT 128

Query: 127 ----DNLINSPLNCSISSPCRQFEEKMKEASG-CKN-TLCCTYLKDSAMTAHMI-RVRIG 186
               D   +   NCS +S C +F     EA G C+  T CC Y   +++  + + R R  
Sbjct: 129 KDGLDAYSSQGFNCSDNSLCHKFLNANLEARGNCRGVTSCCWYKTGASVNTYKVYRARPD 188

Query: 187 GCTAYTSVVNFKPGDSFETWNY-GIELQWIPP 210
            C+AY S +N         W    +E+ W  P
Sbjct: 189 MCSAYQSFMNLDLTIPVSKWGEPAVEILWEAP 220

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BLAST of HG10006373 vs. ExPASy TrEMBL
Match: A0A0A0LGH4 (GUB_WAK_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033280 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.1e-111
Identity = 193/210 (91.90%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MKNIKKTMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQ 60
           MKNIKKTMF IFALFFQ+SKAIAF ACSKCGNLEVPYPLSTNDNCGDSRYKV+C+DDILQ
Sbjct: 1   MKNIKKTMFIIFALFFQLSKAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVHCNDDILQ 60

Query: 61  FKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVM 120
           FKSSEGFYYNIHSIDPNAYKLIISPP+IQ   C+SSDLSLGGLRLDENLPFNVSTHNTVM
Sbjct: 61  FKSSEGFYYNIHSIDPNAYKLIISPPEIQNGRCFSSDLSLGGLRLDENLPFNVSTHNTVM 120

Query: 121 LFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGC 180
           L NCS+NLINSPLNCSI+SPCRQFEEKM EASGCKNTLCCTYLKDSAMTAHMIRVRIGGC
Sbjct: 121 LLNCSNNLINSPLNCSINSPCRQFEEKMIEASGCKNTLCCTYLKDSAMTAHMIRVRIGGC 180

Query: 181 TAYTSVVNFKPGDSFETWNYGIELQWIPPN 211
           TAYTSVVNFKPGD  ETW YGIELQWIPPN
Sbjct: 181 TAYTSVVNFKPGDPVETWKYGIELQWIPPN 210

[Close]

BLAST of HG10006373 vs. ExPASy TrEMBL
Match: A0A5A7U1E3 (Wall-associated receptor kinase-like 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001150 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.8e-109
Identity = 189/203 (93.10%), Postives = 197/203 (97.04%), Query Frame = 0


Query: 8   MFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGF 67
           MFFIFALFFQ+SKAIAF ACSKCGNLEVPYPLSTNDNCGDSRYKVYC+ DILQFKSSEGF
Sbjct: 1   MFFIFALFFQLSKAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVYCNGDILQFKSSEGF 60

Query: 68  YYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDN 127
           YYNIHSIDPNAYKLIISPP+IQK SC+SSDLSLGGLRLDENLPFNVSTHNTVML NCS+N
Sbjct: 61  YYNIHSIDPNAYKLIISPPEIQKGSCFSSDLSLGGLRLDENLPFNVSTHNTVMLLNCSNN 120

Query: 128 LINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 187
           LINSPLNCSI+SPCRQFEEK+KE+SGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV
Sbjct: 121 LINSPLNCSINSPCRQFEEKIKESSGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 180

Query: 188 NFKPGDSFETWNYGIELQWIPPN 211
           NFKPGDS ETW YGIELQWIPPN
Sbjct: 181 NFKPGDSVETWKYGIELQWIPPN 203

[Close]

BLAST of HG10006373 vs. ExPASy TrEMBL
Match: A0A5D3BBU4 (Wall-associated receptor kinase-like 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001350 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 188/203 (92.61%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 8   MFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGF 67
           MFFIFALFFQ+SKAIAF ACSKCGNLEVPYPLSTNDNCGDSRYKVYC+ DILQFKSSEGF
Sbjct: 1   MFFIFALFFQLSKAIAFSACSKCGNLEVPYPLSTNDNCGDSRYKVYCNGDILQFKSSEGF 60

Query: 68  YYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDN 127
           YYNIHSIDPNAYKLIISPP+IQK SC+SSDLSLGGLRLDENLPFNVSTH TVML NCS+N
Sbjct: 61  YYNIHSIDPNAYKLIISPPEIQKGSCFSSDLSLGGLRLDENLPFNVSTHKTVMLLNCSNN 120

Query: 128 LINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 187
           LINSPLNCSI+SPCRQFEEK+KE+SGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV
Sbjct: 121 LINSPLNCSINSPCRQFEEKIKESSGCKNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVV 180

Query: 188 NFKPGDSFETWNYGIELQWIPPN 211
           NFKPGDS ETW YGIELQWIPPN
Sbjct: 181 NFKPGDSVETWKYGIELQWIPPN 203

[Close]

BLAST of HG10006373 vs. ExPASy TrEMBL
Match: A0A6J1DS11 (wall-associated receptor kinase-like 20 OS=Momordica charantia OX=3673 GN=LOC111023315 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 176/210 (83.81%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 1   MKNIKKTMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQ 60
           MKNI KTM  IFALFF VSKA+   +C KCGNLEVPYPLSTNDNCGDSRY++YC+D ILQ
Sbjct: 1   MKNINKTMLLIFALFFHVSKALVCHSCPKCGNLEVPYPLSTNDNCGDSRYRIYCYDGILQ 60

Query: 61  FKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVM 120
           FKSS GFYYNIHSIDP+AYKLII PPQI+++SCYSSDLSLGGLRLDE+LPFN+ST NTVM
Sbjct: 61  FKSSGGFYYNIHSIDPDAYKLIIRPPQIKRKSCYSSDLSLGGLRLDEHLPFNISTQNTVM 120

Query: 121 LFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGGC 180
           L NCSDNLINSPLNCS +S CRQFEEKM+E+SGCKNTLCCTYLKDSAMT+HMIRVRIGGC
Sbjct: 121 LLNCSDNLINSPLNCSTNSLCRQFEEKMEESSGCKNTLCCTYLKDSAMTSHMIRVRIGGC 180

Query: 181 TAYTSVVNFKPGDSFETWNYGIELQWIPPN 211
           TAYT+VVN KPGD FETWNYGIELQW+PPN
Sbjct: 181 TAYTAVVNLKPGDPFETWNYGIELQWVPPN 210

[Close]

BLAST of HG10006373 vs. ExPASy TrEMBL
Match: A0A6J1KGX8 (wall-associated receptor kinase-like 20 OS=Cucurbita maxima OX=3661 GN=LOC111493768 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 175/211 (82.94%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 1   MKNIKKTMFFIFALFFQVSK-AIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDIL 60
           MKNI  TMFFIF LFF+ SK AIAFPAC KCG+LEVP+PLSTN NCGDSRYKVYC   IL
Sbjct: 1   MKNIMNTMFFIFPLFFEASKAAIAFPACPKCGDLEVPFPLSTNGNCGDSRYKVYCRHGIL 60

Query: 61  QFKSSEGFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTV 120
           QFKSS GFYYN+HSID NA KLIISPPQI K SC SSDL LGGLRLDE+LPFN+STHNTV
Sbjct: 61  QFKSSGGFYYNVHSIDANASKLIISPPQINKGSCSSSDLYLGGLRLDESLPFNISTHNTV 120

Query: 121 MLFNCSDNLINSPLNCSISSPCRQFEEKMKEASGCKNTLCCTYLKDSAMTAHMIRVRIGG 180
           ML NCSDNL+ SPLNCS++SPCRQFEEK +EA+GCK+TLCCTYLKDSAMTAHMIRVR+GG
Sbjct: 121 MLLNCSDNLVFSPLNCSLNSPCRQFEEKTEEANGCKDTLCCTYLKDSAMTAHMIRVRVGG 180

Query: 181 CTAYTSVVNFKPGDSFETWNYGIELQWIPPN 211
           CTAYTSVVNFK GDS ETWNYGIELQWI PN
Sbjct: 181 CTAYTSVVNFKGGDSIETWNYGIELQWISPN 211

[Close]

BLAST of HG10006373 vs. TAIR 10
Match: AT5G02070.1 (Protein kinase family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 25  PACSKCGNLEVPYPLSTNDNCGDSRYKVYCHDDILQFKSSEGFYYNIHSIDPNAYKLIIS 84
           P C  CG + VPYPLST   CGD  Y++ C    L F +  G  Y I SI+    ++++ 
Sbjct: 41  PRCPNCGPMVVPYPLSTGPTCGDQAYRINCVGGKLYFGALHGSSYVITSINSVTQRIVLR 100

Query: 85  PPQIQKE-SCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDNLINSPLNCSISSPCRQ 144
           PP +    SC S+D+S  GL LD +LPF++++ NT++L NCS  ++ +P++CS +S C  
Sbjct: 101 PPGLASSVSCISADVSKQGLELDPHLPFSITSSNTILLLNCSQAMLQAPIDCSPTSLCYS 160

Query: 145 FEEKMKEASGC-KNTLCCTYLKDSAMTAHMIRVRIGGCTAYTSVVNFKPGDSF----ETW 204
           + +    AS C K  LCCT+  D + TA+ IR+  GGC AY S V   P        + W
Sbjct: 161 YIK--NNASPCSKAPLCCTFRTDGSQTAYTIRINGGGCLAYQSFVGLNPNKEVPPPGKKW 220

Query: 205 -NYGIELQWIPP 210
            + G+ELQW  P
Sbjct: 221 PDTGLELQWALP 230

[Close]

BLAST of HG10006373 vs. TAIR 10
Match: AT3G53840.1 (Protein kinase superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 8.3e-29
Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 7   TMFFIFALFFQVSKAIAFPACSKCGNLEVPYPLSTNDNCGDSRYKVYCHD-DILQFKSSE 66
           T F +  L +  S   AF  C  CG+  VPYPLST  +CGD  Y++ C +   L F +  
Sbjct: 9   TTFTLSLLIYFSSTTQAFKRCPNCGSTRVPYPLSTGLDCGDPGYRIRCDNYGSLWFDTLN 68

Query: 67  GFYYNIHSIDPNAYKLIISPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCS 126
           G    I +IDP+  + ++ PP  ++  C S D+   G++LD NLPFNVS  NTV++ NC+
Sbjct: 69  GSTNPIKTIDPSGQRFVLRPPGFEQNKCVSVDIKYHGIQLDLNLPFNVSCSNTVIIMNCT 128

Query: 127 ----DNLINSPLNCSISSPCRQFEEKMKEASG-CKN-TLCCTYLKDSAMTAHMI-RVRIG 186
               D   +   NCS +S C +F     EA G C+  T CC Y   +++  + + R R  
Sbjct: 129 KDGLDAYSSQGFNCSDNSLCHKFLNANLEARGNCRGVTSCCWYKTGASVNTYKVYRARPD 188

Query: 187 GCTAYTSVVNFKPGDSFETWNY-GIELQWIPP 210
            C+AY S +N         W    +E+ W  P
Sbjct: 189 MCSAYQSFMNLDLTIPVSKWGEPAVEILWEAP 220

[Close]

BLAST of HG10006373 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 52/202 (25.74%), Postives = 83/202 (41.09%), Query Frame = 0


Query: 28  SKCGNLEVPYPLSTNDNCGDSRYK--VYC--HDDILQFKSSEGFYYNIHSIDPNAYKLII 87
           S CGN+ + YP S +D CG   Y+  + C  +D  L+ ++  G  Y + SI  +   L++
Sbjct: 33  SSCGNIPINYPFSIDDGCGSPYYRHMLICSDNDTKLELRTPSG-KYPVKSISYSDPHLLV 92

Query: 88  SPPQIQKESCYSSDLSLGGLRLDENLPFNVSTHNTVMLFNCSDNLI---NSPLNCS---- 147
           S P +       +        +D +  F VS  N  + FNC+ + +     PL C     
Sbjct: 93  SDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDYLFFNCNTDKVIVEPKPLFCERFPD 152

Query: 148 -ISSPCRQFEEKMKEASGCKNTL-----CCTYLKDSAMTAHMIRVRIGGCTAYTSV---- 207
              S C       +    C + L     CC+Y   +  +   +R+ +  C  YTSV    
Sbjct: 153 RCDSSCDSSSYLCRHLPECGSALGSRVSCCSYYPKATQS---LRLMLQDCATYTSVYWRS 212

[Close]

BLAST of HG10006373 vs. TAIR 10
Match: AT4G03230.1 (S-locus lectin protein kinase family protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.9e-05
Identity = 44/144 (30.56%), Postives = 65/144 (45.14%), Query Frame = 0


Query: 27  CSKCGNLEVPYPLSTNDNCGDSRYKVY-CHDDILQ--FKSSEGFYYNIHSIDPNAYKLII 86
           C  CG   +PYPLST   CGDS Y  + C+    Q  FK S    YNI SI+P+  + +I
Sbjct: 436 CVTCGTNIIPYPLSTAPGCGDSNYLSFNCNMSTGQVIFKGSNS-SYNITSINPDTRRFLI 495

Query: 87  SPPQIQKESCYSSDLS-LGGLRLDENLPFNVS---THNTVMLFNCSDNLINSPL--NCSI 146
               +       + +S L  L+L    PF+++     +TV      +   + PL   CS+
Sbjct: 496 KIKDVVVNCTTVNQISRLSELKLSS--PFHLTGKCNADTVTGGTEVEIRWDPPLEPTCSL 555

Query: 147 SSPCRQFEEK--MKEASGCKNTLC 160
           S+ C+ +      K   G K   C
Sbjct: 556 SADCKDWPNSSCSKSGEGKKQCFC 576

The following BLAST results are available for this feature:

BLAST of HG10006373 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048047.1	5.8e-109	93.10	wall-associated receptor kinase-like 20 [Cucumis melo var. makuwa]	[more]
TYJ96489.1	2.9e-108	92.61	wall-associated receptor kinase-like 20 [Cucumis melo var. makuwa]	[more]
XP_022156422.1	8.1e-103	83.81	wall-associated receptor kinase-like 20 [Momordica charantia]	[more]
KAE8651620.1	9.9e-101	91.67	hypothetical protein Csa_021145 [Cucumis sativus]	[more]
XP_022999379.1	2.1e-98	82.94	wall-associated receptor kinase-like 20 [Cucurbita maxima]	[more]

BLAST of HG10006373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZM4	2.9e-34	39.58	Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL2...	[more]
Q9M342	1.2e-27	34.91	Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana OX=3702 GN=WAKL1...	[more]

BLAST of HG10006373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGH4	5.1e-111	91.90	GUB_WAK_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G03328...	[more]
A0A5A7U1E3	2.8e-109	93.10	Wall-associated receptor kinase-like 20 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BBU4	1.4e-108	92.61	Wall-associated receptor kinase-like 20 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1DS11	3.9e-103	83.81	wall-associated receptor kinase-like 20 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KGX8	1.0e-98	82.94	wall-associated receptor kinase-like 20 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]

BLAST of HG10006373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02070.1	2.0e-35	39.58	Protein kinase family protein	[more]
AT3G53840.1	8.3e-29	34.91	Protein kinase superfamily protein	[more]
AT1G11915.1	1.5e-09	25.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G03230.1	2.9e-05	30.56	S-locus lectin protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025287	Wall-associated receptor kinase, galacturonan-binding domain	PFAM	PF13947	GUB_WAK_bind	coord: 27..82 e-value: 1.0E-7 score: 32.3
None	No IPR available	PANTHER	PTHR33355	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	coord: 7..210
None	No IPR available	PANTHER	PTHR33355:SF14	WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN	coord: 7..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006373.1	HG10006373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0030247	polysaccharide binding