
HG10006336 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCTCAGCGTACTCTTCACAACTGCTAACCTTGTTCCTCATTCTCCTCATTGATCACCCTGCTTTCGGTGACCCGGAAACCCAACAAAGGATTGATCGAATATGCCGTCAAAATGAGGATTATGGATTTTGCAACAGAACCTTCAATGAAAACCTGAGAGGTCCAGCAGATTATGTTGTCCTGACCTTGATAGCAAATGACCAAGTTCTGAGAAACACTTCCAATACCTATCAGTTCATTATGGAACTTCAAGCCAGCACCGTTGATCCAGCAACGAGAGCTGCTCTAGAAACTTGCAGAATTGGTTGCAGCCAGGTCAGGCAGGCTTTCGTGCAGGCGATTTCTTACTTCAATCAGGGAGACTATGCCAATATGGTTGAGGCTGAACGAGCAGCGCCGAAAGGAGAGGCTTTCTGTAGACCACCAACACCAGAGAGCCTGTTAGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCAATGGATGTGGTAACGGGTCATATGCTTGCCACTTGA ATGGCTTTCTCAGCGTACTCTTCACAACTGCTAACCTTGTTCCTCATTCTCCTCATTGATCACCCTGCTTTCGGTGACCCGGAAACCCAACAAAGGATTGATCGAATATGCCGTCAAAATGAGGATTATGGATTTTGCAACAGAACCTTCAATGAAAACCTGAGAGGTCCAGCAGATTATGTTGTCCTGACCTTGATAGCAAATGACCAAGTTCTGAGAAACACTTCCAATACCTATCAGTTCATTATGGAACTTCAAGCCAGCACCGTTGATCCAGCAACGAGAGCTGCTCTAGAAACTTGCAGAATTGGTTGCAGCCAGGTCAGGCAGGCTTTCGTGCAGGCGATTTCTTACTTCAATCAGGGAGACTATGCCAATATGGTTGAGGCTGAACGAGCAGCGCCGAAAGGAGAGGCTTTCTGTAGACCACCAACACCAGAGAGCCTGTTAGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCAATGGATGTGGTAACGGGTCATATGCTTGCCACTTGA ATGGCTTTCTCAGCGTACTCTTCACAACTGCTAACCTTGTTCCTCATTCTCCTCATTGATCACCCTGCTTTCGGTGACCCGGAAACCCAACAAAGGATTGATCGAATATGCCGTCAAAATGAGGATTATGGATTTTGCAACAGAACCTTCAATGAAAACCTGAGAGGTCCAGCAGATTATGTTGTCCTGACCTTGATAGCAAATGACCAAGTTCTGAGAAACACTTCCAATACCTATCAGTTCATTATGGAACTTCAAGCCAGCACCGTTGATCCAGCAACGAGAGCTGCTCTAGAAACTTGCAGAATTGGTTGCAGCCAGGTCAGGCAGGCTTTCGTGCAGGCGATTTCTTACTTCAATCAGGGAGACTATGCCAATATGGTTGAGGCTGAACGAGCAGCGCCGAAAGGAGAGGCTTTCTGTAGACCACCAACACCAGAGAGCCTGTTAGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCAATGGATGTGGTAACGGGTCATATGCTTGCCACTTGA MAFSAYSSQLLTLFLILLIDHPAFGDPETQQRIDRICRQNEDYGFCNRTFNENLRGPADYVVLTLIANDQVLRNTSNTYQFIMELQASTVDPATRAALETCRIGCSQVRQAFVQAISYFNQGDYANMVEAERAAPKGEAFCRPPTPESLLVERKRELRILIAMDVVTGHMLAT Homology
BLAST of HG10006336 vs. NCBI nr
Match: XP_038889172.1 (uncharacterized protein LOC120079054 [Benincasa hispida]) HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80 Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 0
BLAST of HG10006336 vs. NCBI nr
Match: KAG7021031.1 (hypothetical protein SDJN02_17719, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64 Identity = 132/175 (75.43%), Postives = 142/175 (81.14%), Query Frame = 0
BLAST of HG10006336 vs. NCBI nr
Match: KAG6586205.1 (hypothetical protein SDJN03_18938, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 256.1 bits (653), Expect = 2.1e-64 Identity = 131/175 (74.86%), Postives = 142/175 (81.14%), Query Frame = 0
BLAST of HG10006336 vs. NCBI nr
Match: XP_022156390.1 (uncharacterized protein LOC111023296 [Momordica charantia]) HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63 Identity = 128/172 (74.42%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of HG10006336 vs. NCBI nr
Match: XP_023537272.1 (uncharacterized protein LOC111798394 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 249.2 bits (635), Expect = 2.6e-62 Identity = 129/178 (72.47%), Postives = 138/178 (77.53%), Query Frame = 0
BLAST of HG10006336 vs. ExPASy TrEMBL
Match: A0A6J1DQ57 (uncharacterized protein LOC111023296 OS=Momordica charantia OX=3673 GN=LOC111023296 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63 Identity = 128/172 (74.42%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of HG10006336 vs. ExPASy TrEMBL
Match: A0A1S3BWX8 (uncharacterized protein LOC103494023 OS=Cucumis melo OX=3656 GN=LOC103494023 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 3.0e-48 Identity = 111/173 (64.16%), Postives = 122/173 (70.52%), Query Frame = 0
BLAST of HG10006336 vs. ExPASy TrEMBL
Match: A0A6J1DRX6 (uncharacterized protein LOC111023283 OS=Momordica charantia OX=3673 GN=LOC111023283 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 5.4e-34 Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of HG10006336 vs. ExPASy TrEMBL
Match: A0A4U5N9E9 (Invertase/pectin methylesterase inhibitor family protein OS=Populus alba OX=43335 GN=D5086_0000271680 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.3e-31 Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of HG10006336 vs. ExPASy TrEMBL
Match: A0A4U5P757 (Invertase/pectin methylesterase inhibitor family protein OS=Populus alba OX=43335 GN=D5086_0000219520 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 9.6e-31 Identity = 76/175 (43.43%), Postives = 108/175 (61.71%), Query Frame = 0
BLAST of HG10006336 vs. TAIR 10
Match: AT1G09360.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16 Identity = 55/152 (36.18%), Postives = 80/152 (52.63%), Query Frame = 0
BLAST of HG10006336 vs. TAIR 10
Match: AT1G09370.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 0
BLAST of HG10006336 vs. TAIR 10
Match: AT3G49330.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05 Identity = 42/168 (25.00%), Postives = 65/168 (38.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|