HG10006308 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006308
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	26S proteasome non-ATPase regulatory subunit 9
Location	Chr07: 17172657 .. 17176102 (+)
RNA-Seq Expression	HG10006308
Synteny	HG10006308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCTTCCAATTTGAAATCTGAGACTATGGATCTGATGCAGAAGAGGACCGCTATCGAGGCCCAGATGGATGCCATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGTGAATGCAATGACTTCTTTTCCCTCGATTTCCATGAATCAATGAAATTTATTGCAATTCCTCTGTGTTCCTGTTTTCATGATCAGGCTTTGTATTCGAACTACGAAGTGAAAAGTTTCGATTCGGCTAGTTTTGGCGTGCTCGATTGCGACTCTTTTCTTTTGAGGTTTTGTGGAGTAGCCTATAACTAATAACCACAATTGCATTTTGTTTTTAAATTTCTGTGCTAAGTTGGACTTGGAAAGTTGTCTGAAGACTTCTTCATGCTCAATAGAAAATTTATAGGATATTGATGTTGGAAAACTTTGGAATTTCCTTAAATACAAACAATGCTTGATTTTCTGTGGAGTGGATAATACTTTTTGGTAAACTTGAGTCCAGCAGAAGCTTGATTGTTTGTTGCAGTACCTTGATTTGATTTAGTTTGTTTAGAACTTACTTTGTACTCTATTTTTTAATATCTTTTGCAGGGATTTCCTCGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACCGGTAGGGTGCTAATCTTTTCATTATAGACACAGTTTTAATTATGGTGTGCTAAGAAGTGTTTTAATAGTAACTTTGAGAGTAGAAAAGAAATCTGTTTAGAACTGAGCTTGATGGAGAGAAATGAAAGAACCTACAAGAACATAAAAGAATTAGCCCAATGAAGTAGCCTAGCAAACTACAAAAGGAACTTCAATCCATGAGATTGAAAACTTAATGGATTATCGCAAAAGTCCTTCACTGCCGAAGCCCAAACAGATGCATTAAATTTAATACTTTCCCACAACTCCCTTCGAATCTCTCACTCCCTCTAAAAATTATAGAATTCCTCTCAAGCTAAATTCCCCAAATAATAGAAAAAATGAGCATGCCATAGGATTTTGGCCATCTCCCTCAATCTTAACGCTGCAGTCTCTACTTCATGCCAGAATCCAGATAGACTCCAAAATGCCCAAGAATTTGTACCATATTGACTAAGCTTAGTGGCACCTCCACAGAATATGTTTAAGGTCCCCGGATGCTCCTCTGCATAGAGAACATCACTGAGGACCCAAAAAGGAGTAGTGCCCCTGCATGCTATCCGGAGTATTGACTTTCCCATCCCATGAAAGACTGAGTTGCTAGGCAAAAAAAAACTTAACCTTCTTGGAAATCTCTGCCTTCAAGAGAGAGACAAACGATGGGGTGACTGGGGGAAGCTAGGGAACAATGAAAAGATAGAAGAACGAACTGGAAGAGAAGCCCTAGACAGGCATGGGGTCCAGGAACGGCCTTCTTCCATGAAAAATTTGGTAGTAAAAGCAAGGCAGAGACCTCCAACATTTCCCTGTCTTGGAGGGAGACAGTGAAACCCAAAAAGTTTTAGGAATGCAGAGTAAAAAATTTATTATGTTGGTTCTAACTTTCCAGTGAGGTCTCTTTAATCATAGAGTTATTGGATACTATAATACGAGAATTTTAAGTTGTCTTTAGGATCGTCCTGAGTTGGAAATGTGTTCTTCTCTGTTCTGTGGCTTAGGTGTATAAGGATTTGAATCAAAATGTGAAATGTATTCTTATTCCTGTTGTTTTCCATAGTGAGATATTACTTCTGAATGCCCTTGTAATTCCATTGTCTACTTGTCTTTTCCTTTTGGATGATCTGCTTCTTATCCAAAAATAAAAAACTTCATTTTGGATGATGGGATTCAAATTGTAGATTAGTAACTCACTATTAATGTCTCGGTGATGCTAAAGATCGACTTATTTTCTTTAAGCATATCACTAAATGAAGGTGTTCAATTTATAACATTTCTCACATAAGTTATCATGCTTCGAAATGTTGACCTGCTATTCTATTTTTTTAGAGTTGAGGAATGACCACGCGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGCCACTCTCTAGGGATGCAGGTAATTATGAGGTAGATATTATGCTACTGAATGAGTCAATGACAATTATTGTTTATCCTTGCATGTCTCAATTCCAGCTGTGCTAGAATTTCTATTCCGTAGTTAACTAATTCAGGGAGAGTTCAACACTGATATACTCATAGTTTGTTGCTTGACTCTCCTTTTTTGTGGGCATCTTTTTTTAGTATTACCTTCTAAAGTTCGGTTTCTCATCATCAAAACATATAGTCATATATACAATTTGGATTCTGCTTCATTTTATAAAGAGGTTAGAATTGGTCTTCATGAGTAATTCCTTCGGTTGGTTAATTTCCTTACATAATCTTATGTGTTAACAAGCCTTTCCAATCCCTAAAAAACTGTAGAAGGGGTCAAATTTTCGTAATTTGTTAGTATTTAGTAGTAGCACCCACTGAACTCACTACTCAAGACACTAGACCTAGAATTAGCAAAACATGGGTCATGAGGCGTGAGATGTCTTAAAGATTGGAAGAAGTTAATTTAATTTTCAGAAATATGGAAGTTGATGTGTGCTCTTCAACATTTTTTTCTGACTATTCTCCTTCCCTGATTCTTGCCAATGGGTACCTCTGTGTTGCCTACTTGGCTTTGTGGGAGAATTTTTATCTTCCCTCATGTTCATGGTTTTCCTTTTCAAGAATTTTGTTTCTTATTAAACAAAAAGTAACAATAATAATAACCAAAATATTAAAGCCATCACATGCCTATTGCCTGCCGACCTCACAAGTACATATATCCAGTACTAGAATCACCTGCAGATAGATATTTAAAATTGTCTCAAGATGTTTGTGCCATTTGAATAATCATCATGGGATCAATCCTGATTCTACTTATCCCATTCATCTATTAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGCAGTATACCTTTTGCATTGGTTGATGAAATAGCAGATGCATCACCAGCAGCAGATGATGGATTACAGCTGGGTGATCAAGTTATTAAATTCGGGGATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGACTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATGTGCATTGCTTGTCCTTTTCACACTTGCTTAATTCTCAATTTCTCAATTTTATTGAGAAGATTAGATTAGTTACACAATTCTTGACATAA

mRNA sequence

ATGGTGGCTTCCAATTTGAAATCTGAGACTATGGATCTGATGCAGAAGAGGACCGCTATCGAGGCCCAGATGGATGCCATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGGATTTCCTCGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACCGAGTTGAGGAATGACCACGCGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGCCACTCTCTAGGGATGCAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGCAGTATACCTTTTGCATTGGTTGATGAAATAGCAGATGCATCACCAGCAGCAGATGATGGATTACAGCTGGGTGATCAAGTTATTAAATTCGGGGATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGACTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATGTGCATTGCTTGTCCTTTTCACACTTGCTTAATTCTCAATTTCTCAATTTTATTGAGAAGATTAGATTAGTTACACAATTCTTGACATAA

Coding sequence (CDS)

ATGGTGGCTTCCAATTTGAAATCTGAGACTATGGATCTGATGCAGAAGAGGACCGCTATCGAGGCCCAGATGGATGCCATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGGATTTCCTCGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACCGAGTTGAGGAATGACCACGCGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGCCACTCTCTAGGGATGCAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGCAGTATACCTTTTGCATTGGTTGATGAAATAGCAGATGCATCACCAGCAGCAGATGATGGATTACAGCTGGGTGATCAAGTTATTAAATTCGGGGATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGACTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATGTGCATTGCTTGTCCTTTTCACACTTGCTTAATTCTCAATTTCTCAATTTTATTGAGAAGATTAGATTAGTTACACAATTCTTGACATAA

Protein sequence

MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVASPSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDLLRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLGYVHCLSFSHLLNSQFLNFIEKIRLVTQFLT

Homology

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BLAST of HG10006308 vs. NCBI nr
Match: KAA0056101.1 (26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa] >TYJ96416.1 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa])

HSP 1 Score: 417.5 bits (1072), Expect = 8.0e-113
Identity = 217/232 (93.53%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA SL LSRDAGNTEGS GQRSSVT V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACSLSLSRDAGNTEGSIGQRSSVTAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDE+ADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLGYVHCLSFSH 233
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLGYV CLSFSH
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGYVDCLSFSH 232

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BLAST of HG10006308 vs. NCBI nr
Match: XP_008452876.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-107
Identity = 209/223 (93.72%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA SL LSRDAGNTEGS GQRSSVT V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACSLSLSRDAGNTEGSIGQRSSVTAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDE+ADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLG
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLG 223

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BLAST of HG10006308 vs. NCBI nr
Match: XP_038889104.1 (26S proteasome non-ATPase regulatory subunit 9 [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-107
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKRTAIEAQM+AIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRTAIEAQMNAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPAS+L LSRDAGNTEGSNG  SSVTTVAS
Sbjct: 61  SERGRLTELRNDHMEITEKINQNIQVLHSAKPASNLSLSRDAGNTEGSNG--SSVTTVAS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQSDSSTTMDIDANG IPFALVDEIA+ASPAADDGLQLGDQV+KFGDVEGGDDL
Sbjct: 121 PSSNGISQSDSSTTMDIDANGGIPFALVDEIANASPAADDGLQLGDQVLKFGDVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           LRRLASE Q+NQGRP+ VVVMRHGTPVNLTVTPRSWQGRGLLG
Sbjct: 181 LRRLASETQSNQGRPVAVVVMRHGTPVNLTVTPRSWQGRGLLG 221

[Close]

BLAST of HG10006308 vs. NCBI nr
Match: XP_004144734.1 (26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus] >KGN61045.1 hypothetical protein Csa_021342 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106
Identity = 207/223 (92.83%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA  L LSR+AGNTEGS GQRSS+T V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDEIADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLG
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLG 223

[Close]

BLAST of HG10006308 vs. NCBI nr
Match: XP_023545321.1 (26S proteasome non-ATPase regulatory subunit 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.9 bits (969), Expect = 7.0e-101
Identity = 201/223 (90.13%), Postives = 207/223 (92.83%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SER +LTELRNDH EITEKINQNIQVLHSAKPASSL LS+DAGNTE SNGQRSSVTTVA 
Sbjct: 61  SERRQLTELRNDHTEITEKINQNIQVLHSAKPASSLSLSKDAGNTEVSNGQRSSVTTVAL 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSN      SST MDIDANG IPFALVDEIADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSN-----VSSTAMDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           L RLASEAQ+NQGRPIPVVV RHGTPVNLTVTPRSW GRGLLG
Sbjct: 181 LHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLG 218

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BLAST of HG10006308 vs. ExPASy Swiss-Prot
Match: Q3SZ19 (26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus OX=9913 GN=PSMD9 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.1e-19
Identity = 64/217 (29.49%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 8   SETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +L++++  IEAQ+ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDVQELIRRKEEIEAQIKANYEVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIV 80

Query: 68  ELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVASPSSNGIS 127
            L+NDH  + +++   +  LH+         +RD                ++   S G+S
Sbjct: 81  CLQNDHKAVMKQVEDALHQLHARDKEKQ---ARDLAEAHRE--------ALSRDQSQGLS 140

Query: 128 QSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGD-DLLRRLAS 187
            + +             FA V+ I+  SPA+  GLQ+ D++++FG V   +   L+ + S
Sbjct: 141 PAQA-------------FAKVNSISPGSPASIAGLQVDDEILEFGSVNTQNFQSLQNIGS 200

Query: 188 EAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
             Q ++G+P+ V VMR G    L + P  W G+GLLG
Sbjct: 201 VVQHSEGKPLNVTVMRRGEKHQLRLVPTRWAGKGLLG 213

[Close]

BLAST of HG10006308 vs. ExPASy Swiss-Prot
Match: Q9WTV5 (26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-19
Identity = 66/218 (30.28%), Postives = 115/218 (52.75%), Query Frame = 0


Query: 8   SETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +LM+++  IEAQ+ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDIQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80

Query: 68  ELRNDHAEITEKINQNIQVLHSAKPASSLPLSRD-AGNTEGSNGQRSSVTTVASPSSNGI 127
            L+NDH  + +++ + +  LH+         +RD A   E +  +R +  + A P +   
Sbjct: 81  CLQNDHKALMKQVEEALHQLHARDKEKQ---ARDMAEAREEAMNRRLASDSPALPKA--- 140

Query: 128 SQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGD-DLLRRLA 187
                             FA V+ I+  SPA+  GLQ+ D++++FG V   +   L+ + 
Sbjct: 141 ------------------FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLQNVG 200

Query: 188 SEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           +  Q ++G+P+ V+V+R G    L +TP  W G+GLLG
Sbjct: 201 TVVQHSEGKPLNVMVIRRGEKHQLRLTPTRWAGKGLLG 214

[Close]

BLAST of HG10006308 vs. ExPASy Swiss-Prot
Match: O00233 (26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens OX=9606 GN=PSMD9 PE=1 SV=3)

HSP 1 Score: 95.5 bits (236), Expect = 9.1e-19
Identity = 65/217 (29.95%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 8   SETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +LM+++  IEAQ+ A    L    G G++  LVD EG+PRSD+D+  +R+ R  + 
Sbjct: 21  SDVQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNII 80

Query: 68  ELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVASPSSNGIS 127
            L+NDH  + +++ + +  LH+                +     R          S  + 
Sbjct: 81  CLQNDHKAVMKQVEEALHQLHA---------------RDKEKQARDMAEAHKEAMSRKLG 140

Query: 128 QSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGD-DLLRRLAS 187
           QS+S             FA V+ I+  SPA+  GLQ+ D++++FG V   +   L  + S
Sbjct: 141 QSESQ-------GPPRAFAKVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLHNIGS 200

Query: 188 EAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
             Q ++G+P+ V V+R G    L + P  W G+GLLG
Sbjct: 201 VVQHSEGKPLNVTVIRRGEKHQLRLVPTRWAGKGLLG 215

[Close]

BLAST of HG10006308 vs. ExPASy Swiss-Prot
Match: Q9CR00 (26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 64/220 (29.09%), Postives = 114/220 (51.82%), Query Frame = 0


Query: 8   SETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  DLM+++  IEA++ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDIQDLMRRKEEIEAEIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80

Query: 68  ELRNDHAEITEKINQNIQVLHS---AKPASSLPLSRDAGNTEGSNGQRSSVTTVASPSSN 127
            L+NDH  + +++ + +  LH+    K A  +  +R+    E  N + +S + V   +  
Sbjct: 81  CLQNDHKALMKQVEEALHQLHARDKEKQARDMAEARE----EAMNRRLASNSPVLPQA-- 140

Query: 128 GISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGD-DLLRR 187
                               FA V+ I+  SPA+  GLQ+ D++++FG V   +   ++ 
Sbjct: 141 --------------------FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSVQN 200

Query: 188 LASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           + +  Q ++G+P+ V V+R G    L + P  W G+GLLG
Sbjct: 201 VGTVVQHSEGKPLNVTVIRRGEKHQLRLIPTRWAGKGLLG 214

[Close]

BLAST of HG10006308 vs. ExPASy Swiss-Prot
Match: Q9VFS8 (26S proteasome non-ATPase regulatory subunit 9 OS=Drosophila melanogaster OX=7227 GN=CG9588 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 64/226 (28.32%), Postives = 108/226 (47.79%), Query Frame = 0


Query: 1   MVASNLKSETMD-LMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVI 60
           M A     E ++ L+  +  +EAQ++     L      G+SG LVD+EGFPR+DID+  +
Sbjct: 1   MAAGTTTKERLERLINAKKQLEAQINRNGQILAANDNVGMSGPLVDAEGFPRNDIDVYQV 60

Query: 61  RSERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVA 120
           R  R  +  L+NDH E+  +I   +   HS           +   T+     R+S   + 
Sbjct: 61  RLARQTIICLQNDHKELMNQIQTLLNQYHS-----------EIATTDPELVNRASALDLD 120

Query: 121 SPSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGD- 180
           S  S G      +   D+    +I   +V+ ++  SPA   GL  GD +++FG +  G+ 
Sbjct: 121 SDRSPG-----GANITDLAPARAI--VVVNLVSPDSPAERAGLCAGDAILRFGSINSGNF 180

Query: 181 -DLLRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
              L ++    +  Q + + + V R    ++L + P++W GRGLLG
Sbjct: 181 KGDLAQIGELVRNMQSQNVQLKVKRGEQQLDLILVPKTWSGRGLLG 208

[Close]

BLAST of HG10006308 vs. ExPASy TrEMBL
Match: A0A5A7URF2 (26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00430 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.9e-113
Identity = 217/232 (93.53%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA SL LSRDAGNTEGS GQRSSVT V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACSLSLSRDAGNTEGSIGQRSSVTAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDE+ADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLGYVHCLSFSH 233
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLGYV CLSFSH
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGYVDCLSFSH 232

[Close]

BLAST of HG10006308 vs. ExPASy TrEMBL
Match: A0A1S3BUX8 (26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo OX=3656 GN=LOC103493762 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.4e-108
Identity = 209/223 (93.72%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA SL LSRDAGNTEGS GQRSSVT V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACSLSLSRDAGNTEGSIGQRSSVTAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDE+ADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLG
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLG 223

[Close]

BLAST of HG10006308 vs. ExPASy TrEMBL
Match: A0A0A0LGM6 (Nas2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035450 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.1e-107
Identity = 207/223 (92.83%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SERGRLTELRNDH EITEKINQNIQVLHSAKPA  L LSR+AGNTEGS GQRSS+T V S
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSNGISQ DSST MDIDANGSIPFALVDEIADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           LRRLASEAQ NQGR IPVVVMRHGTPVNLTVTPRSWQGRGLLG
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLG 223

[Close]

BLAST of HG10006308 vs. ExPASy TrEMBL
Match: A0A6J1KBP8 (26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494014 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.9e-100
Identity = 200/223 (89.69%), Postives = 206/223 (92.38%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQP GPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPRGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SER +LTELRNDH EITEKINQNIQVLHSAKPASSL LS+DAGNTE SNGQRSSVTTVA 
Sbjct: 61  SERRQLTELRNDHTEITEKINQNIQVLHSAKPASSLSLSKDAGNTEVSNGQRSSVTTVAL 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSN      SST MDIDANG IPFALVDEIADASPAADDGLQLGDQV+KFG+VEGGDDL
Sbjct: 121 PSSN-----VSSTAMDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           L RLASEAQ+NQGRPIPVVV RHGTPVNLTVTPRSW GRGLLG
Sbjct: 181 LHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLG 218

[Close]

BLAST of HG10006308 vs. ExPASy TrEMBL
Match: A0A6J1G4X8 (26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450858 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.9e-100
Identity = 199/223 (89.24%), Postives = 206/223 (92.38%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKR+AIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           SER +LTELRNDH EITEKINQNIQ+LHSAKPASSL LS+DAGNTE SNGQRSSVTTVA 
Sbjct: 61  SERRQLTELRNDHTEITEKINQNIQILHSAKPASSLALSKDAGNTEVSNGQRSSVTTVAV 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
           PSSN      SST MDIDANG IPFALVDEIADASPAADDGLQLGDQV+KFG+VEGGD L
Sbjct: 121 PSSN-----VSSTAMDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           L RLASEAQ+NQGRPIPVVV RHGTPVNLTVTPRSW GRGLLG
Sbjct: 181 LHRLASEAQSNQGRPIPVVVTRHGTPVNLTVTPRSWHGRGLLG 218

[Close]

BLAST of HG10006308 vs. TAIR 10
Match: AT5G57950.1 (26S proteasome regulatory subunit, putative )

HSP 1 Score: 261.2 bits (666), Expect = 8.9e-70
Identity = 137/223 (61.43%), Postives = 174/223 (78.03%), Query Frame = 0


Query: 1   MVASNLKSETMDLMQKRTAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MV +NLK+ETM LM KRTA+E +M++I+ RLC PGGPGLSGNL+DSEGFPR DIDIP++R
Sbjct: 1   MVGANLKAETMALMDKRTAMETEMNSIVERLCNPGGPGLSGNLIDSEGFPREDIDIPMVR 60

Query: 61  SERGRLTELRNDHAEITEKINQNIQVLHSAKPASSLPLSRDAGNTEGSNGQRSSVTTVAS 120
           +ER RL ELR++H EITEKIN NIQ+LHS +P S    ++D+G  E S    +  +  AS
Sbjct: 61  TERRRLAELRSEHGEITEKINVNIQILHSVRPTSRASSTKDSGPEETSLSGAAVNSLSAS 120

Query: 121 PSSNGISQSDSSTTMDIDANGSIPFALVDEIADASPAADDGLQLGDQVIKFGDVEGGDDL 180
             ++G S   +S  MD+D   SIPFA+VDEI ++SPAA+ GLQLGDQV+KFG+VEGGD+L
Sbjct: 121 MQTSGFSV--TSGPMDVDVVTSIPFAMVDEINESSPAAEGGLQLGDQVLKFGNVEGGDNL 180

Query: 181 LRRLASEAQTNQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLG 224
           L+RLA+EAQ+NQG+ + V VMR G  V L+VTPR WQGRGLLG
Sbjct: 181 LQRLAAEAQSNQGQAVSVQVMRQGAKVVLSVTPRIWQGRGLLG 221

The following BLAST results are available for this feature:

BLAST of HG10006308 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056101.1	8.0e-113	93.53	26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa] >TYJ96...	[more]
XP_008452876.1	1.3e-107	93.72	PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo]	[more]
XP_038889104.1	2.2e-107	94.17	26S proteasome non-ATPase regulatory subunit 9 [Benincasa hispida]	[more]
XP_004144734.1	1.5e-106	92.83	26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus] >KGN61045.1 hyp...	[more]
XP_023545321.1	7.0e-101	90.13	26S proteasome non-ATPase regulatory subunit 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10006308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZ19	4.1e-19	29.49	26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus OX=9913 GN=PSMD9 PE...	[more]
Q9WTV5	5.3e-19	30.28	26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=...	[more]
O00233	9.1e-19	29.95	26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens OX=9606 GN=PSMD9 ...	[more]
Q9CR00	2.7e-18	29.09	26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9...	[more]
Q9VFS8	2.0e-13	28.32	26S proteasome non-ATPase regulatory subunit 9 OS=Drosophila melanogaster OX=722...	[more]

BLAST of HG10006308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URF2	3.9e-113	93.53	26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BUX8	6.4e-108	93.72	26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LGM6	7.1e-107	92.83	Nas2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035450 PE=4...	[more]
A0A6J1KBP8	2.9e-100	89.69	26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1G4X8	4.9e-100	89.24	26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita mosc...	[more]

BLAST of HG10006308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57950.1	8.9e-70	61.43	26S proteasome regulatory subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	GENE3D	6.10.140.1710		coord: 2..95 e-value: 2.9E-28 score: 99.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..135
IPR040815	Nas2, N-terminal	PFAM	PF18265	Nas2_N	coord: 12..89 e-value: 4.8E-23 score: 80.9
IPR036034	PDZ superfamily	GENE3D	2.30.42.10		coord: 128..226 e-value: 1.2E-21 score: 78.9
IPR036034	PDZ superfamily	SUPERFAMILY	50156	PDZ domain-like	coord: 146..225
IPR035269	26S Proteasome non-ATPase regulatory subunit 9	PANTHER	PTHR12651	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9	coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006308.1	HG10006308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070682	proteasome regulatory particle assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0005515	protein binding