HG10006298 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006298
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Signal recognition particle receptor subunit alpha-like protein
Location	Chr07: 17076793 .. 17080199 (+)
RNA-Seq Expression	HG10006298
Synteny	HG10006298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGCTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGATCAGGTGCAGCATCTTATAATTATGATGCTCCAGGTGCTGCTTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCGGTGTATCAAAGGATTCTTCATTTATTGTATGTGGATGATTTGCTTGCAATGGTGAAGCAAGGTTTTTCTGAGATATATGATCCAAAGCGGATGGTCTATGATGATTTTGATGAAACTTATAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAAAACAAAGCAGGTGGGAAAGCCTTTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACAGGATTTGGAGAAAACAAGAAAAGCAACAGTGGTTTGGCCGATGATGGTGAGGCTGAGCGTACAAAAGGACATAAGTTGGAGAATGGTTACTCCAATGGCAATCATGTTGTAGAATCTAAACTGACTGCCGTCGTTAATGGAAAAGAAAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTGTTGCTAACAAGGGCTCCAAGGAAGAGCCAAAGAAAAAGGTAACAAAGAAGAATAGAGTTTGGGATGAGAAACCTACTGAGGCAAAATTAGACTTCACAGATCCTGTGGGTGAGAATGGGGACAACAACATCGAGGTTTTGGCAGCAGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTCTTTAGTAGTGACAGCGAGGATGAAGAAGATGAGGAAGGTGACAAGGGTAGTAAGCCCGATGCTAAGAAGAAAGGGTGGTTTTCATCTATGTTCCAGAGGTAAACTTTTTATTTCATGCAGGTTTCCAATCCATAACCTCATCTCTCTTGACATGTCTAAGTTTTGCATTATTGGTTAACTTACACTCTTTAGTTCCTTGAGCTTGATTTTATGCAGTAGGTCACAATTATGTTTATCGGACCTTCAAATTCTCTGATGCATCAATCTGCATATTTTTCATCCACCATTTTTGTTTCTACTCCCCCATATTTCAGATTTCTTCATTGTTGTGTTTTCAAAATGGTGCTAATTTCCTCTCCTTTTTTTCTTCAGTATGAAATTATTAAATTTATATTACATTTGTTATCTGGGCACTTTATATGTTTTAGCTGGATTGGATGGTTGAATTCGGTTCTGTAGTTGAGTTCAAAACTTGCAATTCACATTTTGCATGCACTAACAGGCTTTTAAGACTGCCATTCAGTAACAAAAGCAAGTTATATTGTATGGAAACTGTAATGAAGTTTTGATATTAAGATGAACCTATGTGTATGTGTTACATAGAATTTTAGAGATGAAAGTGGGTCTAGGGATTATATCTTATTATTTGTATATTCCGTAAAGCAAGAGGGAGCTATCATAAAATGACAACCAGAAATCCCATCTTGTTCTTTTTGACATGACTTATTTTGTGAATACTTTGACATGTTAATTTAATATGGGATTATCAATCTTTTTTTTTTTTTCTTTTTTTAATTTTCATTTTTTTGGGTACTGTCGCGTTTCCAGTATCTCAGGCAAGGCAAGTTTGGACAAGTCAGACCTGGAACCAGCTCTGAAGGCTCTCAAGGACAGGCTTATGACAAAGAATGTGGTATGTTTTCACACTATATTTATCTTATCATCTCTTGTTTGTAACTTTTGGCTGCAAGTTAACAAGATATTTCCTGGTTGGATTTTAGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCAGCTAGTCTCGAGGGAAAAAAACTAGCTTCTTTCACAAGGATTTCTTCAACTGTGCAGGTATGTCTTTGAATTGTTACGTGTCCAGTGTTTACTCTCAACCTACTTCATTTCTAATTTCATTTTGTAAGTGACCAAGAACCTTGCTTTAACTTTTCATTATAGGCTGCAATGGAAGAAGCCTTAGTCCGTATACTGACTCCAAGACGCTCCATCGACATTTTGAGGGATGTGCATGCTGCAAAAGAACAAAAGAAACCTTATGTGGTAGTGTTCGTTGGGGTCAATGGAGTTGGAAAATCTACTAATCTTGCCAAGGTCAGGCCTCCTCCTTCCTGCAGAAGTTTGTTCCATGTGTTTTGACATGGCCTTTGATTAGGGAGTTAAATGCTTCAACTTTTATATACAGGTGGCCTATTGGCTTCTTCAGCATAAAGTTAGTGTCATGATGGCCGCTTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTAGAACTCATGCTCGTAGACTTCAGGTATATAATTTCACATTGATATTCTGATTTCTCATTAATCATGATTTTGTTTATCAGGACACACTCAATTGCCTATGTTTATCCTCAATCATTTTCAGATCCCTATATTTGAGAAGGGTTATGAGAAAGATCCTGCGATTGTAGCTAAAGAAGCAATCCATGAGGCATCCCGCAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGTTTGTAACTTTTCTTATTATCCAAAATTGAAGTGATTGTGGATCTCTTGTATATTTTGCAAGATTGGTCATGTCATCAACCAAATATCTTTATCGTATCAAGGAAAAACAAAATTGAAGTGATTGTATCCTAAAGTAGTTTCCTCTTGAGGTTGGAGGTTCAAATCCTCGTTGTCTCACATTTGTTGTATTAAGTTTTTGAATTTTTTATTCATTCGTATCAAAACATGTTGCAACTCTCAGGATAATGAACCACTCATAAGAGCTCTCTCAAAGCTTATCAACCTTAACAGTCCGGATCTGGTCTTGTTCGTTGGGGAGGCCCTCGTTGGGAATGATGCTGTCGATCAACTTTCGAAGTTCAATCAGGTTTTATTTCTATATACGTGGAATTTTTTTCATAAGCTTACCTATTCAACAGTTTTAATTTTCGACCTAGCTCTCGTCTTTTTACTCTCTCTGATTCTTGTCACTGCAGAAACTAGCTGACCTCTCAACTTCACCCGAACCCAGACTGATTGATGGTATCTTGCTTACAAAGTTCGACACCATTGACGACAAGGTAAATAAATTTAGGAACAATCCTAGGTTATTGGGGGTATCCTAATCGATCGTTTATCAGTTAATATAACGCTTCGAGGTTACTTGCAGGTTGGAGCAGCATTGTCTATGGTTTACATATCTGGAGCACCGGTAATGTTCGTCGGCTGCGGGCAGTCATATACCGACCTCAAGAAGCTCAATGTCAAATCGATCATTAAAACGCTTATCAAATGA

mRNA sequence

ATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGCTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGATCAGGTGCAGCATCTTATAATTATGATGCTCCAGGTGCTGCTTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCGGTGTATCAAAGGATTCTTCATTTATTGTATGTGGATGATTTGCTTGCAATGGTGAAGCAAGGTTTTTCTGAGATATATGATCCAAAGCGGATGGTCTATGATGATTTTGATGAAACTTATAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAAAACAAAGCAGGTGGGAAAGCCTTTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACAGGATTTGGAGAAAACAAGAAAAGCAACAGTGGTTTGGCCGATGATGGTGAGGCTGAGCGTACAAAAGGACATAAGTTGGAGAATGGTTACTCCAATGGCAATCATGTTGTAGAATCTAAACTGACTGCCGTCGTTAATGGAAAAGAAAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTGTTGCTAACAAGGGCTCCAAGGAAGAGCCAAAGAAAAAGGTAACAAAGAAGAATAGAGTTTGGGATGAGAAACCTACTGAGGCAAAATTAGACTTCACAGATCCTGTGGGTGAGAATGGGGACAACAACATCGAGGTTTTGGCAGCAGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTCTTTAGTAGTGACAGCGAGGATGAAGAAGATGAGGAAGGTGACAAGGGTAGTAAGCCCGATGCTAAGAAGAAAGGGTGGTTTTCATCTATGTTCCAGAGTATCTCAGGCAAGGCAAGTTTGGACAAGTCAGACCTGGAACCAGCTCTGAAGGCTCTCAAGGACAGGCTTATGACAAAGAATGTGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCAGCTAGTCTCGAGGGAAAAAAACTAGCTTCTTTCACAAGGATTTCTTCAACTGTGCAGGCTGCAATGGAAGAAGCCTTAGTCCGTATACTGACTCCAAGACGCTCCATCGACATTTTGAGGGATGTGCATGCTGCAAAAGAACAAAAGAAACCTTATGTGGTAGTGTTCGTTGGGGTCAATGGAGTTGGAAAATCTACTAATCTTGCCAAGGTGGCCTATTGGCTTCTTCAGCATAAAGTTAGTGTCATGATGGCCGCTTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTAGAACTCATGCTCGTAGACTTCAGATCCCTATATTTGAGAAGGGTTATGAGAAAGATCCTGCGATTGTAGCTAAAGAAGCAATCCATGAGGCATCCCGCAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGATAATGAACCACTCATAAGAGCTCTCTCAAAGCTTATCAACCTTAACAGTCCGGATCTGGTCTTGTTCGTTGGGGAGGCCCTCGTTGGGAATGATGCTGTCGATCAACTTTCGAAGTTCAATCAGAAACTAGCTGACCTCTCAACTTCACCCGAACCCAGACTGATTGATGGTATCTTGCTTACAAAGTTCGACACCATTGACGACAAGGTTGGAGCAGCATTGTCTATGGTTTACATATCTGGAGCACCGGTAATGTTCGTCGGCTGCGGGCAGTCATATACCGACCTCAAGAAGCTCAATGTCAAATCGATCATTAAAACGCTTATCAAATGA

Coding sequence (CDS)

ATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGCTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGATCAGGTGCAGCATCTTATAATTATGATGCTCCAGGTGCTGCTTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCGGTGTATCAAAGGATTCTTCATTTATTGTATGTGGATGATTTGCTTGCAATGGTGAAGCAAGGTTTTTCTGAGATATATGATCCAAAGCGGATGGTCTATGATGATTTTGATGAAACTTATAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAAAACAAAGCAGGTGGGAAAGCCTTTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACAGGATTTGGAGAAAACAAGAAAAGCAACAGTGGTTTGGCCGATGATGGTGAGGCTGAGCGTACAAAAGGACATAAGTTGGAGAATGGTTACTCCAATGGCAATCATGTTGTAGAATCTAAACTGACTGCCGTCGTTAATGGAAAAGAAAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTGTTGCTAACAAGGGCTCCAAGGAAGAGCCAAAGAAAAAGGTAACAAAGAAGAATAGAGTTTGGGATGAGAAACCTACTGAGGCAAAATTAGACTTCACAGATCCTGTGGGTGAGAATGGGGACAACAACATCGAGGTTTTGGCAGCAGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTCTTTAGTAGTGACAGCGAGGATGAAGAAGATGAGGAAGGTGACAAGGGTAGTAAGCCCGATGCTAAGAAGAAAGGGTGGTTTTCATCTATGTTCCAGAGTATCTCAGGCAAGGCAAGTTTGGACAAGTCAGACCTGGAACCAGCTCTGAAGGCTCTCAAGGACAGGCTTATGACAAAGAATGTGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCAGCTAGTCTCGAGGGAAAAAAACTAGCTTCTTTCACAAGGATTTCTTCAACTGTGCAGGCTGCAATGGAAGAAGCCTTAGTCCGTATACTGACTCCAAGACGCTCCATCGACATTTTGAGGGATGTGCATGCTGCAAAAGAACAAAAGAAACCTTATGTGGTAGTGTTCGTTGGGGTCAATGGAGTTGGAAAATCTACTAATCTTGCCAAGGTGGCCTATTGGCTTCTTCAGCATAAAGTTAGTGTCATGATGGCCGCTTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTAGAACTCATGCTCGTAGACTTCAGATCCCTATATTTGAGAAGGGTTATGAGAAAGATCCTGCGATTGTAGCTAAAGAAGCAATCCATGAGGCATCCCGCAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGATAATGAACCACTCATAAGAGCTCTCTCAAAGCTTATCAACCTTAACAGTCCGGATCTGGTCTTGTTCGTTGGGGAGGCCCTCGTTGGGAATGATGCTGTCGATCAACTTTCGAAGTTCAATCAGAAACTAGCTGACCTCTCAACTTCACCCGAACCCAGACTGATTGATGGTATCTTGCTTACAAAGTTCGACACCATTGACGACAAGGTTGGAGCAGCATTGTCTATGGTTTACATATCTGGAGCACCGGTAATGTTCGTCGGCTGCGGGCAGTCATATACCGACCTCAAGAAGCTCAATGTCAAATCGATCATTAAAACGCTTATCAAATGA

Protein sequence

MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEAEARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYSNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVTKKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGDKGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK

Homology

[Close]

BLAST of HG10006298 vs. NCBI nr
Match: XP_008452777.1 (PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >XP_008452784.1 PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >XP_016902096.1 PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >KAA0056108.1 signal recognition particle receptor subunit alpha-like protein [Cucumis melo var. makuwa] >TYJ96409.1 signal recognition particle receptor subunit alpha-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 606/617 (98.22%), Postives = 615/617 (99.68%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELKKTKQVGKPLNN+RKQGQDQKTGFGENKKSNSGLADDG+AERTKGHKLENGYS
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGKEN SSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KG+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. NCBI nr
Match: XP_004144723.1 (signal recognition particle receptor subunit alpha homolog [Cucumis sativus] >KGN61052.1 hypothetical protein Csa_021180 [Cucumis sativus])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 605/617 (98.06%), Postives = 613/617 (99.35%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EAR NELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDG+AERTKGHKLENGYS
Sbjct: 121 EARTNELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGKEN SSNVGAFDVNKLQKLRSKGGKKTD VANKGSKEEPKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNI+VLAADQGQSMMDKEEVFSSDSEDEEDEEGD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KGSKPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. NCBI nr
Match: XP_038890162.1 (signal recognition particle receptor subunit alpha [Benincasa hispida] >XP_038890163.1 signal recognition particle receptor subunit alpha [Benincasa hispida])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 605/617 (98.06%), Postives = 615/617 (99.68%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELKKTKQVGKPLNNARKQGQD+KTGFGENKKSNSGLA+DGEAERTKGHKLENGYS
Sbjct: 121 EARANELKKTKQVGKPLNNARKQGQDKKTGFGENKKSNSGLAEDGEAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT
Sbjct: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDE+GD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEDGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KG KPDAKKKGWFS+MFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGGKPDAKKKGWFSTMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSP+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. NCBI nr
Match: KAG7030089.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 594/618 (96.12%), Postives = 608/618 (98.38%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELK +KQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD G+AERTKG KLENGYS
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGK+NASSNVGAFDVNKLQKLRSKGGKKTDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDS-EDEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEVLAADQGQSMMDKEEVFSSDS E+EEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DKGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D GSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420
           AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
           NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDA 540
           IVAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

Query: 601 YTDLKKLNVKSIIKTLIK 618
           YTDLKKLNVKSI+KTLIK
Sbjct: 601 YTDLKKLNVKSIVKTLIK 618

[Close]

BLAST of HG10006298 vs. NCBI nr
Match: XP_022946538.1 (signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP_022946539.1 signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP_022946540.1 signal recognition particle receptor subunit alpha-like [Cucurbita moschata])

HSP 1 Score: 1125.5 bits (2910), Expect = 0.0e+00
Identity = 591/618 (95.63%), Postives = 606/618 (98.06%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSE YDPK+MVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEKYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELK +KQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD G+AERTKG KLENGYS
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGK+NASSNVGAFDVNKLQKLRSKGGK+TDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKRTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDS-EDEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEVLAADQGQSMMDKEEVFSSDS E+EEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DKGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D GSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420
           AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
           NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDA 540
           IVAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

Query: 601 YTDLKKLNVKSIIKTLIK 618
           YTDLKKLNVK I+KTLIK
Sbjct: 601 YTDLKKLNVKLIVKTLIK 618

[Close]

BLAST of HG10006298 vs. ExPASy Swiss-Prot
Match: Q9U5L1 (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster OX=7227 GN=SrpRalpha PE=1 SV=2)

HSP 1 Score: 432.6 bits (1111), Expect = 7.7e-120
Identity = 284/641 (44.31%), Postives = 390/641 (60.84%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+ ++IFT+GG++LW     GN+   S I++LIR  +LEER+  A Y Y+    A   K
Sbjct: 1   MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYD-DFDETYRQLRME 120
               NEL LV+ A++Q+++ L Y+D  LA ++  F E Y   R+  D DFD  YR++   
Sbjct: 61  --LDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSA 120

Query: 121 AEARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGY 180
           AE  +      KQV  P    R   + QK     +KK+ + +  D +    K   ++   
Sbjct: 121 AEEAS-----AKQVKAP-KTMRSYNESQK-----SKKTVASMIQDDKKPVEKRVNIQEAP 180

Query: 181 SNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSK--GGKKTDTVANKGSKEEPKK 240
                   S  T          S +    + K +KLR K    KKT    +K SK E   
Sbjct: 181 PPSKSQPSSPPT---------GSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE--- 240

Query: 241 KVTKKNRVWDEKPTEAKLDFTDPVGENGDN----NIEVLAADQGQSMMDKEEVFSSDSED 300
           K  KK RVWD           D   ++ D+    NI        Q ++   +V S D  D
Sbjct: 241 KAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEAD 300

Query: 301 EED--EEGDKGSKPDAK--KKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAE 360
            ED   EG+   +  +K  K+G   S F+ I G  ++  +DL+PAL+ ++D L++KNVA 
Sbjct: 301 NEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVAS 360

Query: 361 EIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQK 420
           EIA KLC+SVAASL+GK++ +F  I+S V+ A+ E+LVRIL+P+R IDI+RD   +K   
Sbjct: 361 EIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNG 420

Query: 421 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---- 480
           +PY ++F GVNGVGKSTNLAK+ +WL+++  +V++AACDTFR+GAVEQLRTH R L    
Sbjct: 421 RPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALH 480

Query: 481 ---------QIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALS 540
                     + ++EKGY KD A +A EAI  A     DVVLVDTAGRMQDNEPL+R+LS
Sbjct: 481 PAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLS 540

Query: 541 KLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDK 600
           KLI +N+PDLVLFVGEALVGN+AVDQL KFNQ LAD S++  P +IDGI+LTKFDTIDDK
Sbjct: 541 KLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDK 600

Query: 601 VGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK 618
           VGAA+SM YI+G P++FVG GQ+Y DLK +NV +++ +L+K
Sbjct: 601 VGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614

[Close]

BLAST of HG10006298 vs. ExPASy Swiss-Prot
Match: Q54ZR7 (Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum OX=44689 GN=srpra PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.2e-119
Identity = 274/647 (42.35%), Postives = 393/647 (60.74%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   I T+GG++LW+ KE    ++GSPI++LI+  LLEERS   S+  D    +Y+LK
Sbjct: 1   MLDSFTILTKGGIVLWS-KEFAK-IKGSPINSLIKKVLLEERSAETSFQID----SYSLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIY---------DPKRMVYDDFDE 120
           WTF NE  L+FV VYQ+I  LLY+++LL  VK+ F ++Y             ++ D F E
Sbjct: 61  WTFSNEFDLIFVVVYQKIFTLLYIEELLTTVKKRFIKMYKDLLLKLKESSDFIIVDKFQE 120

Query: 121 TYRQLRMEAEARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTK 180
              ++ +E     ++L++T       N+A K+ +D   G     + N     +G  E+ K
Sbjct: 121 FNFEVILEDVENRSKLQQTS------NSAPKKYEDTDKGKLVKDQKNERAIKEGRVEKVK 180

Query: 181 GHKLE----------------NGYSNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKL 240
             + E                N  S+ +   +S  ++  + +EN S+         + ++
Sbjct: 181 RKEQEKKEKAERRKQNKANNINDISSDDDSDDSDSSSGSDSEEN-SNGATKNQQTDVARI 240

Query: 241 RSKGGKKTDTVANKGSKEEPKKKVT----KKNRVWDEKPTEAKLDFTDPVGENGDNNIEV 300
            + G KK         K+ P K+ +    KK R W++     K    + +  + ++N   
Sbjct: 241 ENSGYKKK-------VKDTPDKQASSSTGKKARTWEDGKLSKK--ELEALNRSDNSNGTE 300

Query: 301 LAADQGQSMMDKEEVFSSDSEDEEDEEGDKGSKPDAKKKGWFSSMFQSISGKASLDKSDL 360
           +  ++ Q      +V SSD +DEE          +AK    F   F  ++G   +DK DL
Sbjct: 301 IVREKIQKFNIDMDVSSSDDDDEE----------EAKPVSGFMKYFNVLTGNRVIDKQDL 360

Query: 361 EPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILT 420
           EP L   K  L  KNVA ++A+K+ +S+   LEGKKLA+F  ++S V+  ME+ + RILT
Sbjct: 361 EPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILT 420

Query: 421 PRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 480
           P+R+IDILR+V A K  K+PY +VF GVNGVGKSTNLAKV YWL  +    M+AACDTFR
Sbjct: 421 PKRNIDILREVQAVK-GKRPYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFR 480

Query: 481 SGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAGRMQDNEPL 540
           SGA+EQL+THA RL + +FE+GY KD A VA++AI  A   G DVVL+DT GRMQ+NEPL
Sbjct: 481 SGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQNNEPL 540

Query: 541 IRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADL--STSPEPRLIDGILLTK 600
           ++ALSKL+N N+ DLVLFVGEALVGND VDQL+KF++ L+ L  +T    R IDGI+LTK
Sbjct: 541 MKALSKLVNQNNVDLVLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHIRTIDGIILTK 600

Query: 601 FDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLI 617
           FDTIDDKVGAA+SMVY +G P++F+G GQ+YTDLK++N+KS++K+L+
Sbjct: 601 FDTIDDKVGAAISMVYSTGHPILFLGTGQNYTDLKRMNIKSVVKSLL 614

[Close]

BLAST of HG10006298 vs. ExPASy Swiss-Prot
Match: Q9DBG7 (Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 6.3e-114
Identity = 275/654 (42.05%), Postives = 385/654 (58.87%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYD---------DFDE 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +              DF  
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 TYRQLRMEAEARAN-ELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERT 180
            + +L  EAE  +      T +  +    A+K  +      GE  K      +  +  + 
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTK------EKAKNNKK 180

Query: 181 KGHKLE--NGYSNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVAN 240
           +G K E  +G    +    ++ + +  G EN   +       K ++   K GK  D  + 
Sbjct: 181 RGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKSSK 240

Query: 241 KGSKEEPKKKVTKKNRVWDEKPTEAK--LDFTDPVGENG--------DNNIEVLAADQGQ 300
               + PK+K  K  RVW+      K  LD++ P   NG        D N+ +     G 
Sbjct: 241 STKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPT-TNGTPEAALSEDINL-IRGTGPGG 300

Query: 301 SMMDKEEVFSSDSEDEEDEEGDKGSKPDAKK--KGWFSSMFQSISGKASLDKSDLEPALK 360
            + D       D    +DE   + +KP A K   G    M + + G  SL + D+E  L 
Sbjct: 301 QLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLD 360

Query: 361 ALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSI 420
            ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++STV+ A++E+LV+IL P+R +
Sbjct: 361 KMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRV 420

Query: 421 DILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 480
           D+LRD+  A+ +++PYVV F GVNGVGKSTNLAK+++WLL++  SV++AACDTFR+GAVE
Sbjct: 421 DMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVE 480

Query: 481 QLRTHARRL-------------QIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAG 540
           QLRTH RRL              + +FEKGY KD A +A EAI  A   G DVVLVDTAG
Sbjct: 481 QLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAG 540

Query: 541 RMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLID 600
           RMQDN PL+ AL+KLI +N+PDLVLFVGEALVGN+AVDQL KFN+ LAD S +  PRLID
Sbjct: 541 RMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLID 600

Query: 601 GILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK 618
           GI+LTKFDTIDDKVGAA+SM YI+  P++FVG GQ+Y DL+ LN K+++  L+K
Sbjct: 601 GIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 635

[Close]

BLAST of HG10006298 vs. ExPASy Swiss-Prot
Match: Q3MHE8 (Signal recognition particle receptor subunit alpha OS=Bos taurus OX=9913 GN=SRPRA PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-112
Identity = 269/659 (40.82%), Postives = 385/659 (58.42%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYD---------DFDE 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +              DF  
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 TYRQLRMEAEARA--------NELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD 180
            + +L  EAE  +         + + +++  KP+ +  +   ++     +N K N G   
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKK 180

Query: 181 DGEAERTKGHKLENGYSNGNHVVESKLTAVVNGKENASSNVGAFDV-NKLQKLRSKGGKK 240
           +G           +G    +    ++ + +  G EN         +  K ++   K G+ 
Sbjct: 181 EG----------SDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRG 240

Query: 241 TDTVANKGSKEEPKKKVTKKNRVW--DEKPTEAKLDFTDPVGENG-------DNNIEVLA 300
            +  +     + PK+K  K  RVW       +  LD++ P            D N+ +  
Sbjct: 241 MEKSSKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPEDINL-IRG 300

Query: 301 ADQGQSMMDKEEVFSSDSEDEEDEEGDKGSKPDAKK--KGWFSSMFQSISGKASLDKSDL 360
              G+ + D +    S S+DE        +KP A K   G    M + + G  SL + D+
Sbjct: 301 TGPGRQLQDLD---CSSSDDE--GAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDM 360

Query: 361 EPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILT 420
           E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++STV+ A++E+LV+IL 
Sbjct: 361 ESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQ 420

Query: 421 PRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 480
           P+R +D+LRD+  A+  ++PYVV F GVNGVGKSTNLAK+++WLL++  SV++AACDTFR
Sbjct: 421 PQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFR 480

Query: 481 SGAVEQLRTHARRL-------------QIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVL 540
           +GAVEQLRTH RRL              + +FEKGY KD A +A EAI  A   G DVVL
Sbjct: 481 AGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVL 540

Query: 541 VDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPE 600
           VDTAGRMQDN PL+ AL+KLI +N+PDLVLFVGEALVGN+AVDQL KFN+ LAD S +  
Sbjct: 541 VDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQT 600

Query: 601 PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK 618
           PRLIDGI+LTKFDTIDDKVGAA+SM YI+  P++FVG GQ+Y DL+ LN K+++  L+K
Sbjct: 601 PRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 638

[Close]

BLAST of HG10006298 vs. ExPASy Swiss-Prot
Match: P08240 (Signal recognition particle receptor subunit alpha OS=Homo sapiens OX=9606 GN=SRPRA PE=1 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 1.3e-111
Identity = 268/648 (41.36%), Postives = 381/648 (58.80%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPK-------RMVYDDFDETY 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +        ++   FD   
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 RQLRMEAEARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGH 180
             LR+  EA  +   +     K   ++ K  +  ++      +     A + + +  K  
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKE 180

Query: 181 KLENGYSNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKE 240
             +   +    V   K    V  +     +       K ++   K G+  +  +NK +K 
Sbjct: 181 GSDGPLATSKPVPAEKSGLPVGPENGVELSKEELIRRKREEFIQKHGRGMEK-SNKSTKS 240

Query: 241 E-PKKKVTKKNRVWDEKPTEAK--LDFTDPVGENG------DNNIEVLAADQGQSMMDKE 300
           + PK+K  K  RVW+      K  LD++ P   NG        +I ++        +   
Sbjct: 241 DAPKEKGKKAPRVWELGGCANKEVLDYSTPT-TNGTPEAALSEDINLIRGTGSGGQLQDL 300

Query: 301 EVFSSDSEDEEDEEGDKGSKPDAKK--KGWFSSMFQSISGKASLDKSDLEPALKALKDRL 360
           +  SSD E          +KP A K   G    M + + G  SL + D+E  L  ++D L
Sbjct: 301 DCSSSDDEG----AAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 360

Query: 361 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDV 420
           + KNVA +IA +LCESVA  LEGK + +F+ ++STV+ A++E+LV+IL P+R +D+LRD+
Sbjct: 361 IAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDI 420

Query: 421 HAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 480
             A+ +++PYVV F GVNGVGKSTNLAK+++WLL++  SV++AACDTFR+GAVEQLRTH 
Sbjct: 421 MDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHT 480

Query: 481 RRL-------------QIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAGRMQDNE 540
           RRL              + +FEKGY KD A +A EAI  A   G DVVLVDTAGRMQDN 
Sbjct: 481 RRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNA 540

Query: 541 PLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGILLTK 600
           PL+ AL+KLI +N+PDLVLFVGEALVGN+AVDQL KFN+ LAD S +  PRLIDGI+LTK
Sbjct: 541 PLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTK 600

Query: 601 FDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK 618
           FDTIDDKVGAA+SM YI+  P++FVG GQ+Y DL+ LN K+++  L+K
Sbjct: 601 FDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637

[Close]

BLAST of HG10006298 vs. ExPASy TrEMBL
Match: A0A1S4E1J4 (signal recognition particle receptor subunit alpha homolog OS=Cucumis melo OX=3656 GN=LOC103493693 PE=3 SV=1)

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 606/617 (98.22%), Postives = 615/617 (99.68%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELKKTKQVGKPLNN+RKQGQDQKTGFGENKKSNSGLADDG+AERTKGHKLENGYS
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGKEN SSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KG+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. ExPASy TrEMBL
Match: A0A5A7ULZ3 (Signal recognition particle receptor subunit alpha-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00360 PE=3 SV=1)

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 606/617 (98.22%), Postives = 615/617 (99.68%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELKKTKQVGKPLNN+RKQGQDQKTGFGENKKSNSGLADDG+AERTKGHKLENGYS
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGKEN SSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KG+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. ExPASy TrEMBL
Match: A0A0A0LK35 (SRP54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035520 PE=3 SV=1)

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 605/617 (98.06%), Postives = 613/617 (99.35%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EAR NELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDG+AERTKGHKLENGYS
Sbjct: 121 EARTNELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGKEN SSNVGAFDVNKLQKLRSKGGKKTD VANKGSKEEPKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300
           KKNRVWDEKPTEAKLDFTDPVGENGDNNI+VLAADQGQSMMDKEEVFSSDSEDEEDEEGD
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDSEDEEDEEGD 300

Query: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVA 360
           KGSKPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESVA
Sbjct: 301 KGSKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA 360

Query: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420
           ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN
Sbjct: 361 ASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVN 420

Query: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI 480
           GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA+
Sbjct: 421 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 480

Query: 481 VAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAV 540
           VAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLNSPDLVLFVGEALVGNDAV
Sbjct: 481 VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAV 540

Query: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600
           DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY
Sbjct: 541 DQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSY 600

Query: 601 TDLKKLNVKSIIKTLIK 618
           TDLKKLNVKSI+KTLIK
Sbjct: 601 TDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. ExPASy TrEMBL
Match: A0A6J1G455 (signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX=3662 GN=LOC111450574 PE=3 SV=1)

HSP 1 Score: 1125.5 bits (2910), Expect = 0.0e+00
Identity = 591/618 (95.63%), Postives = 606/618 (98.06%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSE YDPK+MVYDDFDET+RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEKYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGEAERTKGHKLENGYS 180
           EARANELK +KQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD G+AERTKG KLENGYS
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240
           NGNHV+ESKLTAVVNGK+NASSNVGAFDVNKLQKLRSKGGK+TDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKRTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDS-EDEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEVLAADQGQSMMDKEEVFSSDS E+EEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DKGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D GSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420
           AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
           NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDA 540
           IVAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

Query: 601 YTDLKKLNVKSIIKTLIK 618
           YTDLKKLNVK I+KTLIK
Sbjct: 601 YTDLKKLNVKLIVKTLIK 618

[Close]

BLAST of HG10006298 vs. ExPASy TrEMBL
Match: A0A6J1DYJ5 (signal recognition particle receptor subunit alpha homolog OS=Momordica charantia OX=3673 GN=LOC111024702 PE=3 SV=1)

HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 590/618 (95.47%), Postives = 604/618 (97.73%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQ FSEIYDPKRMVYDDFDE +RQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQQFSEIYDPKRMVYDDFDEAFRQLRMEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGFGEN-KKSNSGLADDGEAERTKGHKLENGY 180
           EARANELKK+KQVGKPLNN RKQGQDQK+GFGEN KKSNSGLADDG+A  T+GHKLENGY
Sbjct: 121 EARANELKKSKQVGKPLNNVRKQGQDQKSGFGENKKKSNSGLADDGDA-HTQGHKLENGY 180

Query: 181 SNGNHVVESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKV 240
           SNGNHVVESKLT VVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTV NKGSKEEPKKK+
Sbjct: 181 SNGNHVVESKLTTVVNGKENASSNVGAFDVNKLQKLRSKGGKKTDTVVNKGSKEEPKKKL 240

Query: 241 TKKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEG 300
           TKKNRVWD+KP EAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEG
Sbjct: 241 TKKNRVWDDKPAEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEEDEEG 300

Query: 301 DKGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           + GSKPDAKKKGWFSSMFQSISGKASL+KSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 NTGSKPDAKKKGWFSSMFQSISGKASLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420
           AASLEGKKLASFTRISSTVQ AMEEALVRILTPRRSIDILRDVHAA+EQKKPYVVVFVGV
Sbjct: 361 AASLEGKKLASFTRISSTVQTAMEEALVRILTPRRSIDILRDVHAAREQKKPYVVVFVGV 420

Query: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
           NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDA 540
           IVAKEAI EASRNGSDVVLVDTAGRMQDNEPL+RALSKLI LN+PDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600
           VDQLSKFNQKLADLSTSP PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

Query: 601 YTDLKKLNVKSIIKTLIK 618
           YTDLKKLNVKSI+KTLIK
Sbjct: 601 YTDLKKLNVKSIVKTLIK 617

[Close]

BLAST of HG10006298 vs. TAIR 10
Match: AT4G30600.1 (signal recognition particle receptor alpha subunit family protein )

HSP 1 Score: 932.9 bits (2410), Expect = 1.3e-271
Identity = 506/635 (79.69%), Postives = 562/635 (88.50%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKE+GNAL+GSPIDTLIRSCLLEERSGA S+NYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETYRQLRMEA 120
           WTFHN+LGLVFVAVYQRILHLLYVDDLL+MVKQ FSE+YDPKRM YDDFDET+RQLR+EA
Sbjct: 61  WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120

Query: 121 EARANELKKTKQVGKPLNNARKQGQDQKTGF-GENKKSNS---GLADDGE-AERTKGHKL 180
           EARA EL+KTKQVGKP+ + +KQGQ  K G  G NK+ +S      DDG+   + K   L
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVSTL 180

Query: 181 ENGYSNGNHVVE---SKLTAVVNGKENASSNVGAFDVNKLQKLRSK------GGKKTDTV 240
            NG+SNGNH +E    +   + NGKEN SSNV A D++KLQKLRSK      G +KTD++
Sbjct: 181 TNGHSNGNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDSI 240

Query: 241 ANKGSK-EEPKKKVTKKNRVWDE-KPTEAKLDFTDPVGENGDN-NIEVLAADQGQSMMDK 300
            NK SK  EP KK TKKNRVWD+  P ++KLDFTD + ENG+N +++++AADQG+SMMDK
Sbjct: 241 GNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMDK 300

Query: 301 EEVFSSDSEDEEDEEGDKGSKP-DAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRL 360
           EEVFSSDSE E+D+E     KP  AKKKGWFSS+FQSI+GKA+L+++DL PALKALK+RL
Sbjct: 301 EEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKERL 360

Query: 361 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDV 420
           MTKNVAEEIAEKLCESV ASLEGKKL+SFTRISSTVQAAME+ALVRILTPRRSIDILRDV
Sbjct: 361 MTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRDV 420

Query: 421 HAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 480
           HAAKEQ+KPYVVVFVGVNGVGKSTNLAKVAYWL QHKVSVMMAACDTFRSGAVEQLRTHA
Sbjct: 421 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHA 480

Query: 481 RRLQIPIFEKGYEKDPAIVAKEAIHEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLN 540
           RRLQIPIFEKGYEKDPA+VAKEAI EA+RNGSDVVLVDTAGRMQDNEPL+RALSKLINLN
Sbjct: 481 RRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN 540

Query: 541 SPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALS 600
            PDLVLFVGEALVGNDAVDQLSKFNQKL+DLSTS  PRLIDGILLTKFDTIDDKVGAALS
Sbjct: 541 QPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALS 600

Query: 601 MVYISGAPVMFVGCGQSYTDLKKLNVKSIIKTLIK 618
           MVYISG+PVMFVGCGQSYTDLKKLNVK+I+KTL+K
Sbjct: 601 MVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLLK 634

[Close]

BLAST of HG10006298 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 126.3 bits (316), Expect = 8.3e-29
Identity = 82/310 (26.45%), Postives = 151/310 (48.71%), Query Frame = 0


Query: 307 AKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 366
           A+  G  +   Q +S    +D+  L   L  +   L+  +V+  + +++  ++   +  +
Sbjct: 4   AELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLE 63

Query: 367 KLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKST 426
            LA+       ++ A+   L ++L P +          A ++ K  VV+FVG+ G GK+T
Sbjct: 64  DLAAGHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTT 123

Query: 427 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAI 486
              K AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +
Sbjct: 124 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 183

Query: 487 HEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKF 546
               +   D+++VDT+GR +    L   + ++     PDLV+FV ++ +G  A DQ   F
Sbjct: 184 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 243

Query: 547 NQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKL 606
            Q +A          +  +++TK D    K G ALS V  + +PV+F+G G+   + +  
Sbjct: 244 KQSVA----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 295

Query: 607 NVKSIIKTLI 617
           +VK  +  L+
Sbjct: 304 DVKPFVSRLL 295

[Close]

BLAST of HG10006298 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 126.3 bits (316), Expect = 8.3e-29
Identity = 82/310 (26.45%), Postives = 151/310 (48.71%), Query Frame = 0


Query: 307 AKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 366
           A+  G  +   Q +S    +D+  L   L  +   L+  +V+  + +++  ++   +  +
Sbjct: 4   AELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLE 63

Query: 367 KLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKST 426
            LA+       ++ A+   L ++L P +          A ++ K  VV+FVG+ G GK+T
Sbjct: 64  DLAAGHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTT 123

Query: 427 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAI 486
              K AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +
Sbjct: 124 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 183

Query: 487 HEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKF 546
               +   D+++VDT+GR +    L   + ++     PDLV+FV ++ +G  A DQ   F
Sbjct: 184 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 243

Query: 547 NQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKL 606
            Q +A          +  +++TK D    K G ALS V  + +PV+F+G G+   + +  
Sbjct: 244 KQSVA----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 295

Query: 607 NVKSIIKTLI 617
           +VK  +  L+
Sbjct: 304 DVKPFVSRLL 295

[Close]

BLAST of HG10006298 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 125.2 bits (313), Expect = 1.9e-28
Identity = 82/310 (26.45%), Postives = 152/310 (49.03%), Query Frame = 0


Query: 307 AKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 366
           A+  G  +   Q ++    +D+  L   L  +   L+  +V+  + EK+  ++   +   
Sbjct: 4   AELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLD 63

Query: 367 KLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKST 426
            LA+       ++ A+ + L R+L P +          A ++ KP VV+FVG+ G GK+T
Sbjct: 64  DLAAGHNKRLIIEQAIFKELCRMLDPGKPA-------FAPKKAKPSVVMFVGLQGAGKTT 123

Query: 427 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAI 486
              K AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +
Sbjct: 124 TCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 183

Query: 487 HEASRNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKF 546
               +   D+++VDT+GR +    L   + ++     PDLV+FV ++ +G  A +Q   F
Sbjct: 184 DRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAF 243

Query: 547 NQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKL 606
            + ++          +  +++TK D    K G ALS V  + +PV+F+G G+   + +  
Sbjct: 244 KETVS----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 295

Query: 607 NVKSIIKTLI 617
           +VK  +  L+
Sbjct: 304 DVKPFVSRLL 295

[Close]

BLAST of HG10006298 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 123.6 bits (309), Expect = 5.4e-28
Identity = 82/294 (27.89%), Postives = 153/294 (52.04%), Query Frame = 0


Query: 311 GWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLAS 370
           G   + +  + G+  L K ++   ++ ++  L+  +V+  +  +  +SV+    G  +  
Sbjct: 83  GGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIR 142

Query: 371 FTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAK 430
             +    +   + + LV+++    S     ++  AK    P V++  G+ GVGK+T  AK
Sbjct: 143 GVKPDQQLVKIVHDELVKLMGGEVS-----ELQFAK--SGPTVILLAGLQGVGKTTVCAK 202

Query: 431 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIHEAS 490
           +A +L +   S M+ A D +R  A++QL     ++ +P++  G +  PA +AK+ + EA 
Sbjct: 203 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 262

Query: 491 RNGSDVVLVDTAGRMQDNEPLIRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKL 550
           +N  DVV++DTAGR+Q ++ ++  L  +    +P  VL V +A+ G +A   ++ FN ++
Sbjct: 263 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 322

Query: 551 ADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLK 605
                      I G +LTK D  D + GAALS+  +SG P+  VG G+   DL+
Sbjct: 323 G----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358

The following BLAST results are available for this feature:

BLAST of HG10006298 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452777.1	0.0e+00	98.22	PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis m...	[more]
XP_004144723.1	0.0e+00	98.06	signal recognition particle receptor subunit alpha homolog [Cucumis sativus] >KG...	[more]
XP_038890162.1	0.0e+00	98.06	signal recognition particle receptor subunit alpha [Benincasa hispida] >XP_03889...	[more]
KAG7030089.1	0.0e+00	96.12	Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb...	[more]
XP_022946538.1	0.0e+00	95.63	signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP...	[more]

BLAST of HG10006298 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9U5L1	7.7e-120	44.31	Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanog...	[more]
Q54ZR7	2.2e-119	42.35	Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum O...	[more]
Q9DBG7	6.3e-114	42.05	Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=S...	[more]
Q3MHE8	1.2e-112	40.82	Signal recognition particle receptor subunit alpha OS=Bos taurus OX=9913 GN=SRPR...	[more]
P08240	1.3e-111	41.36	Signal recognition particle receptor subunit alpha OS=Homo sapiens OX=9606 GN=SR...	[more]

BLAST of HG10006298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1J4	0.0e+00	98.22	signal recognition particle receptor subunit alpha homolog OS=Cucumis melo OX=36...	[more]
A0A5A7ULZ3	0.0e+00	98.22	Signal recognition particle receptor subunit alpha-like protein OS=Cucumis melo ...	[more]
A0A0A0LK35	0.0e+00	98.06	SRP54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035520 PE=3 ...	[more]
A0A6J1G455	0.0e+00	95.63	signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX...	[more]
A0A6J1DYJ5	0.0e+00	95.47	signal recognition particle receptor subunit alpha homolog OS=Momordica charanti...	[more]

BLAST of HG10006298 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30600.1	1.3e-271	79.69	signal recognition particle receptor alpha subunit family protein	[more]
AT1G48900.1	8.3e-29	26.45	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	8.3e-29	26.45	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	1.9e-28	26.45	signal recognition particle 54 kDa subunit	[more]
AT5G03940.1	5.4e-28	27.89	chloroplast signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 308..390 e-value: 2.5E-5 score: 33.7
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 313..381 e-value: 1.0E-8 score: 35.2
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 411..617 e-value: 3.9E-82 score: 288.8
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 412..616 e-value: 1.1E-54 score: 185.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 590..603
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 410..555 e-value: 1.1E-5 score: 34.8
None	No IPR available	GENE3D	3.30.450.60		coord: 1..125 e-value: 5.1E-38 score: 131.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..310
None	No IPR available	PANTHER	PTHR43134:SF10	BNAA01G06530D PROTEIN	coord: 1..617
None	No IPR available	PANTHER	PTHR43134	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	coord: 1..617
None	No IPR available	CDD	cd14826	SR_alpha_SRX	coord: 3..116 e-value: 1.28987E-44 score: 152.742
None	No IPR available	CDD	cd17876	SRalpha_C	coord: 424..615 e-value: 4.36424E-132 score: 383.503
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 279..393 e-value: 2.0E-24 score: 87.8
IPR007222	Signal recognition particle receptor, alpha subunit, N-terminal	PFAM	PF04086	SRP-alpha_N	coord: 28..296 e-value: 2.2E-69 score: 234.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 395..617 e-value: 3.0E-93 score: 313.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 408..615
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..123
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 311..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006298.1	HG10006298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005785	signal recognition particle receptor complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005047	signal recognition particle binding