HG10006277 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGGTTTTTCTTCCCTCCTTTAAGTTTTGTTTATTACTGTTTTTTTGCTTTGCGATTGTTTTCTTTTGCCTTCTGCGATCAGTATTATTGGCGTTGACATTAATGATTCAATTCTTATTGTTTGGTATCCTTTTTAACTTTAAAGTAGTTCGTGTATTGTTTTTCTCCTTCATTAATTTCAAGTTTATTCGATGCTAGGATCATTTACACTGTTGGCAATGTTGGTTCTACATTGAAATATTTGAATGAGAATTGATGAATGCATGAAAATGAATAGTCTTCATATCGCTTTGATCATGATATCAGGGGTAGTTGATTTTGTGTTCTCGTATGCGATAAGGAAAACCCCTTTGAAAGAATTTCGGATTGTATGGGAAATTTAAGTTGTGGACAATATTATGGAGCTAAGGGAACTGTTGACAGTTTATAATTTGTTTAGATCTTGATTTTCCTAGATGGTTGTGATAATTTAAGTGGCCATATGACTTACTGACATGATTCTCTTATAGCTCTATTGTAGATCCCCCCGGGGCCTCTTTTATCTAGAAATAAGTTGGTAGATGGTCATCTAAGCTGTTGAATTTTTTTAATTATCATGACATGTTCATCCTTTATGCGGGCTTACAATTTTTTTGGTTCATTTTTTCTTCGGTCCTTTGTATCTAAATTCATCATCTATTACATATCTTGCAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGTATGTCTTTACTATATCCTAAATTGAAAAAGTTTAGTGTGTTCTCTTGTTTAGATATTTTTCTCCATTTATTCGATGCATTATAACCGTATCTTTAATGACTTTAGAGGGTTATATGCCAACTGGTAGTAATCCATGTGATCTTATGGTAGCACGCTTTATTTCTTCTCAGATGCTTTTGTTAGTCCCAACTCCCATTTTTGTTCATCTTGAGGCTGTTGTGAGTGGCTTCACTAATCACTAACCTAGAAAAATCCCGTTCACAAATGTAGAAACATGAATAAATAATTTTGTGAAGACCTTGATTAATGTGGGGGATATGGTGGGATATGGTGTTGTTTTCATAAATGACGAAACATAACCATTTCTCTCTCCTTTCCCTCTTCTAAATTGGATACATAAGCTTATAAATTTCCTGGAAGTCCAAATTTGAAATTACCTCTCCATGTGAAGGATTTATTTCTGTTATTAGGTGGCCATCTTTTCAGACACAAGTCCTAAGCTCTCTGGAATGTCGCATGAAAATTATGATCCTTCAAAAAGCCAAGGCCTCTAAGATTAATTTGATCTGTTCACATGCCTGAAATTTCTCCTTTACATATCAGTCACTAAACATTATGCATGTCAACTTCTTAGTGTATGCGTCTGAATTTTGCTGCTTGTTCATGAACCTGTAGGATTTTTTTTTTTGCAATGTAATTAAACTTATTGTCCTGGCTGATGGATTGAGCTTACCTCACTACAAATGACGAGGTTGTCCATTATGCATACCGTTGCTGGTGTCTTTTGAACTGTTATATCCATTCTCACATCGATGTGGCTGATGGAATAATCAAATTAGGAAAATAACAGTTGTGCATCTGAGCCATGATTCTATTTGGGGAAACTGCACTCTCTGGTTTCATTTTTAGTTACCTCAAAAAAAAAAAGGTCGTCTTTTGAACTTAATTTGTTAGCTAAACATTATTTTGGTCGGATTGCTTCCTTTTTCAATTAAGAACAAGAGAAATCTTTTCATTGAATTAATGGAAAGATTTTTCAATTGAGATGGGTTGAAACTAGGACTTTCTTGTGAGGTTTTGCTTTATTTCCACATCTATTTTCTTCTCTCCAACAGTATAATATATGTATGCATCACGTACTGATTTTCTTGACCATAATTTTTCCAAGGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGGTAAACTTTGCTTTGCTTATAAGTTTTTAATATGGCCAACCTTGACGGCAGTTGTTTTCTTTAGAGCTTTCCAGTATGTTCTGAAGCTGTTGTAATAACCTTCCTTTATTAAATTTTATTTATTAACAGATGGGGTCATGTATATTTTATCTACTTGCAGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTAGGCCTTTTACTGTTTTAAAACTATTTGTCAGTATCATATTTCATTCATCTTTGTTTTAGAACTTGCTTCGGACCAATGGAAATTAAGGCACGTGCATGTGAAGTAATACCCTTTTTGTCATGAGGGGCAAAGTTTTACGTACATAATCTTTACCATCCAAAAAAAATTTCAAGAAAAAACTTTTAACACCTAATTCTTTTATGTATATTTTTGTTGGTCAATTACCACCTTGCTCCCCTTTCCTGGCTCTGCCTGTGAGTGACCTGTGAATCTACTGCATCTGCATCGACACAGATATTTAGTGCATGAGCAACATTTGAATCTAGACAAGTGAATACACATTGGATATCGGATATCATCAATTACTTCATCTTCTAAGTCGATAGTTTGTTCCCTATTCATGAATTTATAATGCTATATTTCTGTTTGAGCAGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAG ATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAG ATGGTTCGGATAGAAATGGAGGAACCCCAGGACGAAGTTCCTAGTCCTCCGGAGGCCTCTGCATCGGCCAAAAAGGCGACGGATTCAAGCAGCGGTCCGTCAACATCTAATGCGAGCAAAAACCCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGCGATGAGCATCAAGAGAATCCTGATCAAAATTCAGAACAGGAGGAACGAATTGCCACGCTTAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAACGCGAAGTTGGCGGGCAACAAACTATTTGGAGAAGGAAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGAACATTGCTCCGGATATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCTAACCGTGGCGTGTGTTTGCTAAAACTAGAAAAATATGATGACACGATCAAAGCATGCTCAAAGGCAATTGAACTGAATCCTGGATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAATGACCAGGCTAAGAAGACCATCCGTCGCCTTGAACCGCTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTAAAAGACCCAAATACTGGTTCCTATTCAATTTCATTCCAACGATAG MVRIEMEEPQDEVPSPPEASASAKKATDSSSGPSTSNASKNPSDGYETASDGELGDSGDEHQENPDQNSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNIAPDMPSAVELRSICHANRGVCLLKLEKYDDTIKACSKAIELNPGYVKALSRRGEAHEKLEHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQR Homology
BLAST of HG10006277 vs. NCBI nr
Match: XP_038889502.1 (tetratricopeptide repeat protein 1 [Benincasa hispida]) HSP 1 Score: 471.9 bits (1213), Expect = 3.7e-129 Identity = 252/263 (95.82%), Postives = 257/263 (97.72%), Query Frame = 0
BLAST of HG10006277 vs. NCBI nr
Match: KAA0043100.1 (tetratricopeptide repeat protein 1 [Cucumis melo var. makuwa] >TYJ96388.1 tetratricopeptide repeat protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124 Identity = 245/263 (93.16%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of HG10006277 vs. NCBI nr
Match: XP_008452420.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]) HSP 1 Score: 455.7 bits (1171), Expect = 2.7e-124 Identity = 245/263 (93.16%), Postives = 250/263 (95.06%), Query Frame = 0
BLAST of HG10006277 vs. NCBI nr
Match: XP_004144712.1 (tetratricopeptide repeat protein 1 [Cucumis sativus] >KGN61074.1 hypothetical protein Csa_021252 [Cucumis sativus]) HSP 1 Score: 455.3 bits (1170), Expect = 3.6e-124 Identity = 244/263 (92.78%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of HG10006277 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-120 Identity = 235/263 (89.35%), Postives = 250/263 (95.06%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy Swiss-Prot
Match: Q99614 (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.2e-31 Identity = 96/254 (37.80%), Postives = 140/254 (55.12%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy Swiss-Prot
Match: Q91Z38 (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 83/213 (38.97%), Postives = 124/213 (58.22%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy Swiss-Prot
Match: Q3ZBR5 (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.0e-28 Identity = 98/272 (36.03%), Postives = 148/272 (54.41%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy Swiss-Prot
Match: Q75Q39 (Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus OX=10116 GN=Tomm70 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy Swiss-Prot
Match: Q80ZX8 (Sperm-associated antigen 1 OS=Mus musculus OX=10090 GN=Spag1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.6e-12 Identity = 70/237 (29.54%), Postives = 121/237 (51.05%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy TrEMBL
Match: A0A5A7TIE6 (Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00140 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 6.0e-125 Identity = 245/263 (93.16%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy TrEMBL
Match: A0A1S3BTU1 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103493454 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124 Identity = 245/263 (93.16%), Postives = 250/263 (95.06%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy TrEMBL
Match: A0A0A0LJ51 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.7e-124 Identity = 244/263 (92.78%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy TrEMBL
Match: A0A6J1KKL8 (tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120 Identity = 234/263 (88.97%), Postives = 250/263 (95.06%), Query Frame = 0
BLAST of HG10006277 vs. ExPASy TrEMBL
Match: A0A6J1G423 (tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 2.0e-120 Identity = 234/263 (88.97%), Postives = 249/263 (94.68%), Query Frame = 0
BLAST of HG10006277 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 276.2 bits (705), Expect = 2.8e-74 Identity = 163/282 (57.80%), Postives = 198/282 (70.21%), Query Frame = 0
BLAST of HG10006277 vs. TAIR 10
Match: AT4G30480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 155.2 bits (391), Expect = 7.2e-38 Identity = 99/209 (47.37%), Postives = 129/209 (61.72%), Query Frame = 0
BLAST of HG10006277 vs. TAIR 10
Match: AT4G30480.3 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-20 Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 0
BLAST of HG10006277 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 ) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = 0
BLAST of HG10006277 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 ) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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