HG10006266 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006266
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor IBH1-like 1
Location	Chr07: 16647727 .. 16648254 (-)
RNA-Seq Expression	HG10006266
Synteny	HG10006266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTTCAAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCTATAAAGATGTCGGCCGACTACGCCACAGCCGCAACGAGGAACGGCGCGACTATTTGGAGTCGAACCATCATTGCTAAATCTATTAAAGGCCAAGCTCCACTTGAAGGCATATTGAATCGTCGAACGGTATATACGAAGCTTCGAAGGAAGAAGACAACGACGATGACGACGATGCTAAAGATGGGTCGGAGAGTTGGTCGAAAAGTGGCGAGGAGTTGCTCGCCTCCGTCAAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCAAAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATTGAAGAAGCCCTAGATTATATAACGTTTCTTCAAGCACAGGTTGATGGAATGCGTTTTCTTGCTAATTCTTGCACATGA

mRNA sequence

ATGCCTAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTTCAAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCTATAAAGATGTCGGCCGACTACGCCACAGCCGCAACGAGGAACGGCGCGACTATTTGGAGTCGAACCATCATTGCTAAATCTATTAAAGGCCAAGCTCCACTTGAAGGCATATTGAATCGTCGAACGGTATATACGAAGCTTCGAAGGAAGAAGACAACGACGATGACGACGATGCTAAAGATGGGTCGGAGAGTTGGTCGAAAAGTGGCGAGGAGTTGCTCGCCTCCGTCAAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCAAAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATTGAAGAAGCCCTAGATTATATAACGTTTCTTCAAGCACAGGTTGATGGAATGCGTTTTCTTGCTAATTCTTGCACATGA

Coding sequence (CDS)

ATGCCTAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTTCAAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCTATAAAGATGTCGGCCGACTACGCCACAGCCGCAACGAGGAACGGCGCGACTATTTGGAGTCGAACCATCATTGCTAAATCTATTAAAGGCCAAGCTCCACTTGAAGGCATATTGAATCGTCGAACGGTATATACGAAGCTTCGAAGGAAGAAGACAACGACGATGACGACGATGCTAAAGATGGGTCGGAGAGTTGGTCGAAAAGTGGCGAGGAGTTGCTCGCCTCCGTCAAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCAAAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATTGAAGAAGCCCTAGATTATATAACGTTTCTTCAAGCACAGGTTGATGGAATGCGTTTTCTTGCTAATTCTTGCACATGA

Protein sequence

MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTIIAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSKALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSCT

Homology

[Close]

BLAST of HG10006266 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 155/174 (89.08%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNPNKLKQQFLKKWLVGLKSTTSSNTNMN LERKKAIKMSADYA AATRNG+TIWSR I
Sbjct: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSKALAST 120
           IAKSIKGQAPLE I NR+T+Y KL+RKK TT TT+ KMGRRVGRKVARS SPP KALA T
Sbjct: 61  IAKSIKGQAPLEAISNRQTIYAKLQRKKMTT-TTLWKMGRRVGRKVARSRSPPWKALART 120

Query: 121 VAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSC 175
           VAKRLVEKRTKVLRSLVPGGEFMED+VLLIEEALDYITFLQAQVDGMRFLAN C
Sbjct: 121 VAKRLVEKRTKVLRSLVPGGEFMEDEVLLIEEALDYITFLQAQVDGMRFLANYC 173

[Close]

BLAST of HG10006266 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 255.4 bits (651), Expect = 3.6e-64
Identity = 138/175 (78.86%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNPNKLKQQFLK WLVGL+STTSS TNMNFL+RKKAIK+SADYA AATRNG TIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALAS 120
           IAKS+KG AP E ILNRRT Y  L RKK  TMT + KMGR++GRK+A RS  P SKAL S
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSC 175
           T+AKRLVEKRTKVLRSL+PGGEFM+D+ LLIEEALDYI FLQAQVDGMRFLAN C
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYC 174

[Close]

BLAST of HG10006266 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 2.6e-62
Identity = 136/175 (77.71%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPN NKLKQQFLK WLVGL+STTSS TNMNFL+RKKAIK+SADYA AATRNG TIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALAS 120
           IAK +KG AP E ILNRRT Y  L RKK  TMT + KMGR++GRK+A RS  P SKAL S
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSC 175
           T+AKRLVEKRTKVLRSL+PGGEFM+D+ LLIEEALDYI FLQAQVDGMRFLAN C
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYC 174

[Close]

BLAST of HG10006266 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60
Identity = 133/174 (76.44%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSN-TNMNFLERKKAIKMSADYATAATRNGATIWSRT 60
           MPNPNKLKQQFLKKWLVGL+STTSS+ TNMNFL+RKKAIK+SADYA A TR G TIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALA 120
           IIAKS+KG AP + ILNR T+Y  L RKK  TMT + KMGR++GR++A RS  P SK L 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKK-RTMTQLQKMGRKIGRRMARRSRLPSSKVLP 120

Query: 121 STVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLAN 173
            T+AKRLVEKRTKVLRSL+PGGEFMED+VLLIEEALDYI FLQAQVDGMRFLAN
Sbjct: 121 RTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 173

[Close]

BLAST of HG10006266 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-48
Identity = 118/177 (66.67%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNPNKLKQ+FL+KW V LK+ T+SNT M+  ERKKAIKMSAD A A+ RNG TIWSR I
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSIKGQAPLEGILN---RRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCS--PPSK 120
           IAKS+K + P E +L+        +KL RKKTT + T  K  RRVGR+  R  +  PPSK
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQT--KGRRRVGRRATRRSNFFPPSK 120

Query: 121 ALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLAN 173
           A A  VAKRLVEKR KVLRSLVPGGEFMED+VLLIEE LDYI+FL+AQVDGMRFLA+
Sbjct: 121 AFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 175

[Close]

BLAST of HG10006266 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.5e-24
Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           M   + + ++FLKKW +GL+    S  N +  ERKKAIK+SAD A A+ R G T WSR +
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSIKG-----QAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSK 120
           I K+        +  L GI    T+  K   KKT     +++  +++ R+ ++S S    
Sbjct: 61  IEKTATEDNFLVRQMLSGI-KAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEE-- 120

Query: 121 ALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANS 174
             A+  AKRLV++RT+ LR++VPGGE M +DVLL++E LDYI  LQ QV+ MR + ++
Sbjct: 121 --AAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of HG10006266 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 17  VGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTIIAKSIKGQAPLEGILN 76
           V L S+ S++++    +R KA++ +AD A A +  G T+WSR I+A  IK          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRTVYTKLRRKKTT----TMTTMLKMGRRVGRKVARSCSPPSKALASTVAKRLVEKRTKV 136
               + K RR + T     MTT++       RK   S    +K          V ++ +V
Sbjct: 128 --LKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPD-----VNRKVRV 187

Query: 137 LRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFL 171
           L  LVPG       V+L EEA DYI  L+ QV  M  L
Sbjct: 188 LGRLVPGCGKQSVPVIL-EEATDYIQALEMQVRAMNSL 207

[Close]

BLAST of HG10006266 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64
Identity = 138/175 (78.86%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNPNKLKQQFLK WLVGL+STTSS TNMNFL+RKKAIK+SADYA AATRNG TIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALAS 120
           IAKS+KG AP E ILNRRT Y  L RKK  TMT + KMGR++GRK+A RS  P SKAL S
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSC 175
           T+AKRLVEKRTKVLRSL+PGGEFM+D+ LLIEEALDYI FLQAQVDGMRFLAN C
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYC 174

[Close]

BLAST of HG10006266 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 136/175 (77.71%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPN NKLKQQFLK WLVGL+STTSS TNMNFL+RKKAIK+SADYA AATRNG TIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALAS 120
           IAK +KG AP E ILNRRT Y  L RKK  TMT + KMGR++GRK+A RS  P SKAL S
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANSC 175
           T+AKRLVEKRTKVLRSL+PGGEFM+D+ LLIEEALDYI FLQAQVDGMRFLAN C
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYC 174

[Close]

BLAST of HG10006266 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.9e-61
Identity = 133/174 (76.44%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSN-TNMNFLERKKAIKMSADYATAATRNGATIWSRT 60
           MPNPNKLKQQFLKKWLVGL+STTSS+ TNMNFL+RKKAIK+SADYA A TR G TIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVA-RSCSPPSKALA 120
           IIAKS+KG AP + ILNR T+Y  L RKK  TMT + KMGR++GR++A RS  P SK L 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKK-RTMTQLQKMGRKIGRRMARRSRLPSSKVLP 120

Query: 121 STVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLAN 173
            T+AKRLVEKRTKVLRSL+PGGEFMED+VLLIEEALDYI FLQAQVDGMRFLAN
Sbjct: 121 RTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 173

[Close]

BLAST of HG10006266 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 118/177 (66.67%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNPNKLKQ+FL+KW V LK+ T+SNT M+  ERKKAIKMSAD A A+ RNG TIWSR I
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSIKGQAPLEGILN---RRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCS--PPSK 120
           IAKS+K + P E +L+        +KL RKKTT + T  K  RRVGR+  R  +  PPSK
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQT--KGRRRVGRRATRRSNFFPPSK 120

Query: 121 ALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLAN 173
           A A  VAKRLVEKR KVLRSLVPGGEFMED+VLLIEE LDYI+FL+AQVDGMRFLA+
Sbjct: 121 AFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 175

[Close]

BLAST of HG10006266 vs. ExPASy TrEMBL
Match: A0A6J1HLT3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.5e-44
Identity = 111/172 (64.53%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           MPNP  LK+ FLKKW++GL   T SNT MNFLERKKAIK S+D A AATRNGAT WSR I
Sbjct: 1   MPNPINLKRIFLKKWIMGLNPITFSNTTMNFLERKKAIKASSDLAMAATRNGATRWSRAI 60

Query: 61  IAKSIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSKALAST 120
           IAKSI  QAP E          KLRRK     TT+ K+GR++ R+   + S  S+++A +
Sbjct: 61  IAKSI--QAPTE---------AKLRRK-----TTLHKIGRKLARR--HTHSSRSRSVARS 120

Query: 121 VAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLAN 173
           VAKRLV+KRTKVLRSLVPGGEFMED+ LLI+EALDYI+FL+ QVDGMRFLAN
Sbjct: 121 VAKRLVQKRTKVLRSLVPGGEFMEDEALLIDEALDYISFLRVQVDGMRFLAN 154

[Close]

BLAST of HG10006266 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           M   + + ++FLKKW +GL+    S  N +  ERKKAIK+SAD A A+ R G T WSR +
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSIKG-----QAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSK 120
           I K+        +  L GI    T+  K   KKT     +++  +++ R+ ++S S    
Sbjct: 61  IEKTATEDNFLVRQMLSGI-KAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEE-- 120

Query: 121 ALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANS 174
             A+  AKRLV++RT+ LR++VPGGE M +DVLL++E LDYI  LQ QV+ MR + ++
Sbjct: 121 --AAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of HG10006266 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTI 60
           M   + + ++FLKKW +GL+    S  N +  ERKKAIK+SAD A A+ R G T WSR +
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSIKG-----QAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSK 120
           I K+        +  L GI    T+  K   KKT     +++  +++ R+ ++S S    
Sbjct: 61  IEKTATEDNFLVRQMLSGI-KAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEE-- 120

Query: 121 ALASTVAKRLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLANS 174
             A+  AKRLV++RT+ LR++VPGGE M +DVLL++E LDYI  LQ QV+ MR + ++
Sbjct: 121 --AAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of HG10006266 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 9.0e-21
Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 5   NKLKQQFLKKWLVGLKSTTSSNTN-MNFLERKKAIKMSADYATAATRNGATIWSRTIIAK 64
           N +KQ+F+KKW+  L    SS  + +N  ERK AI++S+D A AA RNG+T+WSR +I++
Sbjct: 6   NMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRALISR 65

Query: 65  SIKGQAPLEGILNRRTVYTKLRRKKTTTMTTMLKMGRRVGRKVARSCSPPSKALASTVAK 124
           S    A        + +  ++ +K    M     + RR G               +  AK
Sbjct: 66  SGNKTA-------NKPMARRILKKARNRMKNRCNILRRNG---------------NFTAK 125

Query: 125 RLVEKRTKVLRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFLA 172
             V KRT +L+SLVPGGE ++D   LI E LDYI +L+AQVD MR +A
Sbjct: 126 TWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of HG10006266 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 17  VGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTIIAKSIKGQAPLEGILN 76
           V L S+ S++++    +R KA++ +AD A A +  G T+WSR I+A  IK          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRTVYTKLRRKKTT----TMTTMLKMGRRVGRKVARSCSPPSKALASTVAKRLVEKRTKV 136
               + K RR + T     MTT++       RK   S    +K          V ++ +V
Sbjct: 128 --LKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPD-----VNRKVRV 187

Query: 137 LRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFL 171
           L  LVPG       V+L EEA DYI  L+ QV  M  L
Sbjct: 188 LGRLVPGCGKQSVPVIL-EEATDYIQALEMQVRAMNSL 207

[Close]

BLAST of HG10006266 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 17  VGLKSTTSSNTNMNFLERKKAIKMSADYATAATRNGATIWSRTIIAKSIKGQAPLEGILN 76
           V L S+ S++++    +R KA++ +AD A A +  G T+WSR I+A  IK          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRTVYTKLRRKKTT----TMTTMLKMGRRVGRKVARSCSPPSKALASTVAKRLVEKRTKV 136
               + K RR + T     MTT++       RK   S    +K          V ++ +V
Sbjct: 128 --LKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPD-----VNRKVRV 187

Query: 137 LRSLVPGGEFMEDDVLLIEEALDYITFLQAQVDGMRFL 171
           L  LVPG       V+L EEA DYI  L+ QV  M  L
Sbjct: 188 LGRLVPGCGKQSVPVIL-EEATDYIQALEMQVRAMNSL 207

The following BLAST results are available for this feature:

BLAST of HG10006266 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890559.1	2.3e-74	89.08	transcription factor IBH1-like 1 [Benincasa hispida]	[more]
KAA0048635.1	3.6e-64	78.86	transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f...	[more]
XP_008452339.1	2.6e-62	77.71	PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]	[more]
XP_004149100.1	1.4e-60	76.44	transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot...	[more]
XP_022153351.1	2.1e-48	66.67	transcription factor IBH1-like 1 [Momordica charantia]	[more]

BLAST of HG10006266 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	6.5e-24	40.45	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9C8Z9	2.3e-05	32.28	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]

BLAST of HG10006266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK75	1.8e-64	78.86	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BT01	1.3e-62	77.71	uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=...	[more]
A0A0A0LM92	6.9e-61	76.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1	[more]
A0A6J1DKD7	1.0e-48	66.67	transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ...	[more]
A0A6J1HLT3	4.5e-44	64.53	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=...	[more]

BLAST of HG10006266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	4.6e-25	40.45	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	4.6e-25	40.45	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	9.0e-21	39.29	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT3G06590.1	1.7e-06	32.28	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	1.7e-06	32.28	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..173
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..173
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 118..171 e-value: 1.55566E-13 score: 59.9436
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 128..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006266.1	HG10006266.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding