HG10006258 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10006258
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCASP-like protein
LocationChr07: 16531565 .. 16535099 (+)
RNA-Seq ExpressionHG10006258
SyntenyHG10006258
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTGTAAGCTCTCTCTCACTCTCGTTCTCGCTCTTTTCATTGACTCTTTTCTCTTCATTTGTTGAGTTTTCGTGTTTTTGTTTTTAAGAGTAGAAATTTGAGCATCTAACTTTAAAATTGATGCTTAAACTAGTAGAGAATTAGAATTAGAATTTGACAAAACTTTAGTTGGGGCGAATAAGTGAAGAAGAAAGAGGGGTTGATAGTTGCCCGTACAGTCTCCTAGATTGAAGAAATTATTTAAGGATTTAAGGATATTGTCACGATGTTGCGAGTAGAGTTTTATGTTTGATGTTTATCTAATATGGTATATCAGATAACATGAAATCTTAAGAGGCATTCAATCGGAAAAAAATGTGGATTTGATAAAAAAAATGGTATTTAATATTATAATTGGGAAGAAAACAACGTTACAAGGGAGTTTAAACCTAAGACATCAGGAACTAATCTGCTCTGATACCATGTTAAATCGTTGATTGACCCAAAAACTTAAACTAATAGGTAAAGAAAAATTTAATTACATCGTCTAACACATGTTAAGTTTTATATTTAGGAACAAATTGCATTATTAATTCTAATTCCAACACATATTCTCATAATCCAATTGAGAGCTCCAATTAGTTCTTACCAATAATAAACCTTGTTGGTTGTATGGCTTTATAGTTTTAAAATTTTTATCTATAAATGCAATGTTTTAACTTTCTTTTTTATTATTATTATCCTTTTTTTTTTTTTTTTCTTGTTTTGGTGATAGAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGTTTGTCTTCTTTTTTTCACTTATTGACATCAATAAATTTTGGTTGACAAATAATCTTTGAGTGTTGTTTGAATTGACTATTTATGTACTTTAAAAGCGGTTTTTCCTTTTTCATTTTGAAACATTTTTTTAAATATTTAGAAAGTCAATCCAAACATGTTTAAATTATCTAGGTATGTATATGAATTGCAACTTTTTTTTTATAAAAAAAAATAGTTTTGAGTATGTATAACCTTTATTTGGTTTACAAGTTTAGGATTGGTAAAATTTAAGGTGGGCAAGATAAAATTCAAAAGATGTAAGAGATGGATCTAAATTTTGTCATATCCAGTTCAAACTATTAGCAGATATAGTACAATACAAATAAATTTGAAAATATGACAAAATTTAGATCCAGCTCTTATAGTCTATCATTGATAGACCATATTATTAATAGGAGTATCACTAATTAGAGTATAATCTATCAGTGATAAATTTTGTTATATTTGCAATTCTTTAAAAATGTTGCTATATACTTAATTATTAGTTCTAAAAATGCTACCCATTGCAATTACCCTAATTTTCTAAAATCTCGTTTGACAATAAGCAACTTTTGATTTTTGAATTTTGGTCCTTTACTTTCCAAACGTCTATTCTAACTTTCATACTTTTAAAAAATTGTTATTTTAGCTTCATGATATTCCTTATTATCTCCTATCTTTTTATGATAATTTTAGCATGAAACTTTACCCAATAAATTTCTTGAAATGTACCCATTATAAATTTATATAAAGGGTTTCGATTTTTTTTTTTTTATTAAATTTGTGTTGAAATTTTACAAATAGAAACAAAAATTGTCACTTTTCTAAAATATACATGGACATAAGTAAACATTTTCTAATTCTACAAATACTAAAATAAAACAGAAATTAAAGTTATAGGCAACAAAGTAAACGTTTTGAAAGTATAATGACCAAAGTGAAATTAAACTAAAAATTAAATACAGGTACTAAAACAGTATTAAACATTTTATTTAATATATCAAAATTATAAAAAGAAGTCAAATGAAAAATTGAAGAAAAATGTTATATAATAATGGCTCTAGTTTCCCTCACCAAGAGGGAGTAAATTAATGGACCTTCCCAACCTTCTGTGATAATGGAGGAAAAGGACACTGACAAGTGCTTTATCACAAGAAACTATGTGATGTAATTGCCAAACATTAGGAAAGTTTTCGGTTAGGTTTCACACTTAAGAAAGATAAACTTGTTACAAATACATGTTTTAGTTTTTTTTTTTTTTAGTCCCATTTATTTTAATATTTTAATATTGTTACTAGATGTTAAAATTAGCTCATGGTAAATTTATTAGAACAAGATATATTTAGTGACTTGGTAAAAGTTTAGATAAGAAATTAAATCGCTTCTTGTAAAAAAAAAAAAAAAAAAAATTATATAAGTTAGGGAGATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACACAAAATAGTAAAATTTTTAGATAGAAGTCTATTAGATGCTGATAGAAGTCTATCAATGTCTATCAGTACTTTTTTTGCTATTTTCTGTAAATAATTTGATGTTTTTTCTATCTGGGAAAATTTTCTTATAAGTTATCTATAGAAATTTTTTAATTTTTTCTTCTCATTTAAACTTTAGTTTTGTAAATATAAAATTTGGGAGAAGAAGATGGAATTAAATAAACTCAAGGAAGTGGTTTTTTTTAATTAGAATTTTTAGGTGTTGTTTTAAACAATCAAGTCAAGTTTGAAAAGGAGAAAATGTAATTTTCAAAAACTTGTTTTTGTTAATAGAGTTTGACTAGGAGTTCAAGTGTTTTCCTTAAAAAAACTAAAACCAATAATTTAAAAATAAGAATAAAACAAATGGTTATTTTCAAATACAGAAAAATGAGTCAAACTATTTACAAATATAGAAAAATTTTGCTGTCTATCAGCGATAGACCGCGATAGAATTCTATGATCACTTGAGCGATAGATAGCGATAGATTTCTATCGCTGATAGACAGTAAAGTTTTTCTATATTCGTAAATAGTTTGATATTTTTTCAAACTCAAAAGAAAAAAAAAATCCTTATCCATGAGTCTCAAAAGGGCCCCAAAATGTGTTAATGTGTGCCAACTTCCAAGTTGGAAGGAACAACTAGCAAATTAAATTCTTCATTGTCATTGAAGTAGTTTGAACTACCATTGACACAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA

mRNA sequence

ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA

Coding sequence (CDS)

ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA

Protein sequence

MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLKSNNK
Homology
BLAST of HG10006258 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 158/186 (84.95%), Postives = 169/186 (90.86%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGFGDV+TEGILRFCAII LVL+VLLLGFD ET QIFHVDKKASF+SLRALV+I+YV+SM
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            AGYNILQLCKCW+ A+ K GISKLG  F IYLFWLSFFLDQ AAY+TFA+NTAGMEAA 
Sbjct: 61  AAGYNILQLCKCWIFAQPK-GISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF RFCYQ GGAFLCGYAAFF LL ISFISAFNLFRHYSPNHFL
Sbjct: 121 LAVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFL 180

Query: 181 RLKSNN 187
           RLKS+N
Sbjct: 181 RLKSSN 185

BLAST of HG10006258 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGFG+VRTEGILRFCAI  LVL+V LLGFD +TTQIFH+DKKASFRSLRALV+I+YV+SM
Sbjct: 1   MGFGNVRTEGILRFCAIFLLVLSVCLLGFDKQTTQIFHIDKKASFRSLRALVIIIYVDSM 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            AGYNILQ+CKCW+ A+ K GISKLGG FDIYLFWLSFFLDQAA Y+TFAANTAGMEA+F
Sbjct: 61  VAGYNILQICKCWIFAQPK-GISKLGGHFDIYLFWLSFFLDQAAVYLTFAANTAGMEASF 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG  DFQWMKLCNRF RFCYQ GGAFLCGYAAF  LL ISFISAF+LFRHYSPNHFL
Sbjct: 121 LAVTGARDFQWMKLCNRFHRFCYQVGGAFLCGYAAFSTLLVISFISAFSLFRHYSPNHFL 180

Query: 181 RLKSNNK 188
           RLKS+NK
Sbjct: 181 RLKSSNK 186

BLAST of HG10006258 vs. NCBI nr
Match: XP_022153293.1 (CASP-like protein 2C1 [Momordica charantia])

HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77
Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 0

Query: 3   FGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGA 62
           FGD RTEGILRFCAIIGL+LTV LLGFD +TTQIFHVDKKA+FRSLR+L++IMYVNS+ A
Sbjct: 4   FGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNSVAA 63

Query: 63  GYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLA 122
           GYN+LQLCKCW+SA+ KLG SKLG  +DIY+FW+SFFLDQA AY+ FAANTAG+EAA LA
Sbjct: 64  GYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQAIAYVIFAANTAGVEAALLA 123

Query: 123 VTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRL 182
           +TG ++ QWMKLCNRF RFC+QAGGAFLCGYAA   + AISFISAFNLF HYSP+HFLR 
Sbjct: 124 ITGAYNLQWMKLCNRFTRFCFQAGGAFLCGYAASLTMAAISFISAFNLFTHYSPSHFLRP 183

Query: 183 KS 185
           KS
Sbjct: 184 KS 185

BLAST of HG10006258 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 7.8e-73
Identity = 142/185 (76.76%), Postives = 154/185 (83.24%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGF D RTEGILR  AIIGLVLTVLLLGFD +TTQIFH+DKKASFRSL A V+IMYV+S+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            A YNILQ+CKCW+SA+ K G SKLG    I LFW SF LDQA AY+ FAANTAGMEAA 
Sbjct: 61  AAAYNILQICKCWISAQPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF+RFCYQ GGAFLCGY AFF + AI  IS+FNLFRHYSPN F 
Sbjct: 121 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFF 180

Query: 181 RLKSN 186
           RLKSN
Sbjct: 181 RLKSN 184

BLAST of HG10006258 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 142/185 (76.76%), Postives = 153/185 (82.70%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGF D RTEGILR  AIIGLVLTVLLLGFD +TTQIFH+DKKASFRSL A V+IMYV+S+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            A YNILQ+CKCW+SA  K G SKLG    I LFW SF LDQA AY+ FAANTAGMEAA 
Sbjct: 61  AAAYNILQICKCWISAHPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF+RFCYQ GGAFLCGY AFF + AI  IS+FNLFRHYSPN F 
Sbjct: 121 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFF 180

Query: 181 RLKSN 186
           RLKSN
Sbjct: 181 RLKSN 184

BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43
Identity = 91/177 (51.41%), Postives = 122/177 (68.93%), Query Frame = 0

Query: 7   RTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNI 66
           + E ILR  AI+ LV T  L+G D++T  +   +K+ +++ L ALV+++YV+++ A YN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGV 126
           LQLC+C +SA SK       G +  YL W  F LDQ AAY TFAA++A ++ + L +TG 
Sbjct: 67  LQLCRCSVSALSK---GNFKGSYR-YLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGA 126

Query: 127 HDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLK 184
             FQWMK CNRF RFC+Q GGA  CGY A  +++ ISFISAFNLFR YSP HFLRLK
Sbjct: 127 KVFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-41
Identity = 87/177 (49.15%), Postives = 116/177 (65.54%), Query Frame = 0

Query: 7   RTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNI 66
           + E ++R   I+ LVLT  L+G D++T  IF+V KKASF+ LRALV ++Y+ S+ A YN+
Sbjct: 7   KIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNL 66

Query: 67  LQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGV 126
           LQLC    SA  K G S        YL WL + LDQA  Y  FA N A +E +FL +TG 
Sbjct: 67  LQLCCSSFSASYK-GTSL---QSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGE 126

Query: 127 HDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLK 184
            +FQW+K CN++ RFC Q GG+ LCG+ A  ++ +I+ ISAFNLFR YSP  F+ LK
Sbjct: 127 ENFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 0

Query: 2   GFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKK-ASFRSLRALVMIMYVNSM 61
           G    R E  LR  AI+ LVLT  LLGFD +T  +F   KK A+FR L AL +++YV+S+
Sbjct: 25  GISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSV 84

Query: 62  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 121
            AGYN+LQL + ++SAK K    KL     + L W+ F LDQAA Y  F+ANTA ++A+ 
Sbjct: 85  AAGYNLLQLGRGFISAKLK---GKLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASI 144

Query: 122 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 181
           +AVTG    QWMK+CNR+ RFC Q GGA L GY A  +++ +S +SAF+LFR YSP  F 
Sbjct: 145 IAVTGESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFH 204

Query: 182 RLK 184
            LK
Sbjct: 205 LLK 204

BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIF-HVDKKASFRSLRALVMIMYVNS 60
           M  G  R E  LR  AI+ LVLT  L+  D +T  +F  ++KKA+++ L AL +++YV  
Sbjct: 1   MKLGMARGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTC 60

Query: 61  MGAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAA 120
             AGYN+L LCK  + ++     S L       + W+ F LDQ A Y+TFAANTA M AA
Sbjct: 61  AAAGYNLLLLCKHSIWSRKNFKGSYL------CMAWICFSLDQIAVYMTFAANTATMGAA 120

Query: 121 FLAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHF 180
            LA++G   FQW+K+C++F RFC + GGA LCGYAA  ++  IS ISA+ +FR YSP  F
Sbjct: 121 VLAISGSEAFQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWF 179

Query: 181 LRLKS 185
           LRLKS
Sbjct: 181 LRLKS 179

BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.3e-33
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0

Query: 8   TEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNIL 67
           TE ILR C +  L+LT  L+G D++T +I ++ K  SFR L AL   +Y++ + A YN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGVH 127
           QL   W + + K    K          W S+ LDQ AAY+ FA  +A  + + L VTG  
Sbjct: 67  QLGLGWYNVEQKTSNPK----------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 126

Query: 128 DFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLKSNN 187
           + QWMK C +F RFC+Q G A +  Y A  +++ +S ISAFNLFR YSP  F R KS++
Sbjct: 127 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSSS 175

BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A0A0LK62 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 158/186 (84.95%), Postives = 169/186 (90.86%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGFGDV+TEGILRFCAII LVL+VLLLGFD ET QIFHVDKKASF+SLRALV+I+YV+SM
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            AGYNILQLCKCW+ A+ K GISKLG  F IYLFWLSFFLDQ AAY+TFA+NTAGMEAA 
Sbjct: 61  AAGYNILQLCKCWIFAQPK-GISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF RFCYQ GGAFLCGYAAFF LL ISFISAFNLFRHYSPNHFL
Sbjct: 121 LAVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFL 180

Query: 181 RLKSNN 187
           RLKS+N
Sbjct: 181 RLKSSN 185

BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1DH36 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 0

Query: 3   FGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGA 62
           FGD RTEGILRFCAIIGL+LTV LLGFD +TTQIFHVDKKA+FRSLR+L++IMYVNS+ A
Sbjct: 4   FGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNSVAA 63

Query: 63  GYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLA 122
           GYN+LQLCKCW+SA+ KLG SKLG  +DIY+FW+SFFLDQA AY+ FAANTAG+EAA LA
Sbjct: 64  GYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQAIAYVIFAANTAGVEAALLA 123

Query: 123 VTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRL 182
           +TG ++ QWMKLCNRF RFC+QAGGAFLCGYAA   + AISFISAFNLF HYSP+HFLR 
Sbjct: 124 ITGAYNLQWMKLCNRFTRFCFQAGGAFLCGYAASLTMAAISFISAFNLFTHYSPSHFLRP 183

Query: 183 KS 185
           KS
Sbjct: 184 KS 185

BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1FCZ2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.4e-73
Identity = 142/185 (76.76%), Postives = 153/185 (82.70%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGF D RTEGILR  AIIGLVLTVLLLGFD +TTQIFH+DKKASFRSL A V+IMYV+S+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            A YNILQ+CKCW+SA  K G SKLG    I LFW SF LDQA AY+ FAANTAGMEAA 
Sbjct: 61  AAAYNILQICKCWISAHPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF+RFCYQ GGAFLCGY AFF + AI  IS+FNLFRHYSPN F 
Sbjct: 121 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFF 180

Query: 181 RLKSN 186
           RLKSN
Sbjct: 181 RLKSN 184

BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1HQ91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 139/185 (75.14%), Postives = 152/185 (82.16%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGF D +TEGILR  AIIGLVLTVLLLGFD +TTQIFH+DKKASFRSL A V+IMYV+S+
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            A YNILQ+C CW+SA+ K G SKLG    I LFW SF LDQA AY+ FAANTAGMEAA 
Sbjct: 61  AAAYNILQICNCWISAQPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAAL 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           LAVTG HDFQWMKLCNRF+RFCYQ GGAFLCGY AFF + AI  IS+FNLFRHY PN F 
Sbjct: 121 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFF 180

Query: 181 RLKSN 186
           RLKSN
Sbjct: 181 RLKSN 184

BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1ET65 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436264 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.2e-68
Identity = 136/186 (73.12%), Postives = 151/186 (81.18%), Query Frame = 0

Query: 1   MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSM 60
           MGFGD RTE ILR CAII LVLTV L+GFD ETTQIF VDK ASFRSL AL +IM+V+S+
Sbjct: 1   MGFGDARTEWILRLCAIICLVLTVFLMGFDKETTQIFGVDKTASFRSLGALKVIMFVDSI 60

Query: 61  GAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAF 120
            A YNILQL KCW+SA  K    +L   F + LFWLSFF+DQA AY+TFAANTAGMEAAF
Sbjct: 61  AAAYNILQLAKCWISAHPKPPF-QLQTHFHLPLFWLSFFIDQAGAYLTFAANTAGMEAAF 120

Query: 121 LAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFL 180
           +AV G  +FQWMKLCNRF R+CYQA GAFLCGYAA   +L ISF+SAFNLFRHYSPNHFL
Sbjct: 121 VAVRGNQEFQWMKLCNRFHRYCYQAAGAFLCGYAAVLTMLLISFLSAFNLFRHYSPNHFL 180

Query: 181 RLKSNN 187
           RLK NN
Sbjct: 181 RLKPNN 185

BLAST of HG10006258 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 142.1 bits (357), Expect = 4.5e-34
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0

Query: 8   TEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNIL 67
           TE ILR C +  L+LT  L+G D++T +I ++ K  SFR L AL   +Y++ + A YN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGVH 127
           QL   W + + K    K          W S+ LDQ AAY+ FA  +A  + + L VTG  
Sbjct: 67  QLGLGWYNVEQKTSNPK----------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 126

Query: 128 DFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLKSNN 187
           + QWMK C +F RFC+Q G A +  Y A  +++ +S ISAFNLFR YSP  F R KS++
Sbjct: 127 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSSS 175

BLAST of HG10006258 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 60/167 (35.93%), Postives = 90/167 (53.89%), Query Frame = 0

Query: 8   TEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNIL 67
           TE ILR    +  ++  +L+  D +  +IF + KKA F  ++ALV+++ VN + AGY+++
Sbjct: 30  TELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLV 89

Query: 68  QLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGVH 127
           Q  +C       +G+ K    F   L W  FF DQA AY+  A   A  ++A  A  G  
Sbjct: 90  QAVRC------VVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEP 149

Query: 128 DFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHY 175
           + QWMK+CN + +FC Q G        A   ++ IS ISAF +FR Y
Sbjct: 150 ELQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLY 190

BLAST of HG10006258 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.1 bits (209), Expect = 6.5e-17
Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 0

Query: 8   TEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNIL 67
           TE +LR    +  +L ++L+  D E   IF + K A +  ++A+V ++  N + A Y++L
Sbjct: 11  TELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLL 70

Query: 68  QLCKCWL-SAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGV 127
           Q  +C + + K K+  SK        L W  F  DQA AY+  AA  A  E+  +A  G 
Sbjct: 71  QSVRCVVGTMKGKVLFSK-------PLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGE 130

Query: 128 HDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHY 175
            D QWM++C  + +FC Q          A   ++ +S ISAF+LFR Y
Sbjct: 131 EDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

BLAST of HG10006258 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07
Identity = 41/169 (24.26%), Postives = 75/169 (44.38%), Query Frame = 0

Query: 9   EGILRFCAIIGLVLTVLLLGFDNETTQIF--HVDKKASFRSLRALVMIMYVNSMGAGYNI 68
           E ILR  A    + + +L+G  +ET   F   +  +A +  L AL   +  N++ +GY I
Sbjct: 29  EFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAVVSGYLI 88

Query: 69  LQLCKCWLS-AKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTG 128
           L L   ++   K K   +++          L   LD A   +  +  ++     +LA  G
Sbjct: 89  LSLTLAFVHIVKRKTQNTRI----------LLIILDVAMLGLLTSGASSAAAIVYLAHNG 148

Query: 129 VHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHY 175
            +   W  +C +F  FC +  G+ +  + A  +L+ +  +SA  L R +
Sbjct: 149 NNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

BLAST of HG10006258 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 42/170 (24.71%), Postives = 74/170 (43.53%), Query Frame = 0

Query: 8   TEGILRFCAIIGLVLTVLLLGFDNETTQIFHVD-----KKASFRSLRALVMIMYVNSMGA 67
           T+ +LRF      + +++++    +T  IF          A F +  AL+  +   S+  
Sbjct: 29  TQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVAC 88

Query: 68  GYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLA 127
            Y+I+      +SA  K   S +       L      +D     I  +A  AG   A+L 
Sbjct: 89  FYSIVSTF-VTVSAFKKHSCSAV-------LLLNLAIMDAVMVGIVASATGAGGGVAYLG 148

Query: 128 VTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFR 173
           + G  + +W K+C+ + +FC   GGA      A  +LL +S IS  +L++
Sbjct: 149 LKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004149074.12.9e-8384.95CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021... [more]
XP_038889630.11.4e-8283.42CASP-like protein 2C1 [Benincasa hispida][more]
XP_022153293.13.1e-7777.47CASP-like protein 2C1 [Momordica charantia][more]
XP_023537147.17.8e-7376.76CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like prote... [more]
XP_022938059.11.3e-7276.76CASP-like protein 2C1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
B9IM093.0e-4351.41CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S... [more]
Q5K4H94.8e-4149.15CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1[more]
A7Q6G61.2e-3950.27CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1[more]
C6SZ041.1e-3747.57CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1[more]
Q8L8U96.3e-3341.90CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LK621.4e-8384.95CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1[more]
A0A6J1DH361.5e-7777.47CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1[more]
A0A6J1FCZ26.4e-7376.76CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1[more]
A0A6J1HQ911.6e-7175.14CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1[more]
A0A6J1ET656.2e-6873.12CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436264 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G25830.14.5e-3441.90Uncharacterised protein family (UPF0497) [more]
AT2G35760.11.5e-2135.93Uncharacterised protein family (UPF0497) [more]
AT4G16442.16.5e-1733.33Uncharacterised protein family (UPF0497) [more]
AT5G15290.16.1e-0724.26Uncharacterised protein family (UPF0497) [more]
AT4G15610.11.5e-0524.71Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 11..169
e-value: 7.6E-23
score: 79.0
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 8..157
e-value: 3.9E-30
score: 104.6
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 3..184
NoneNo IPR availablePANTHERPTHR11615:SF241CASP-LIKE PROTEIN 2C1coord: 3..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10006258.1HG10006258.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding