HG10006258 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTGTAAGCTCTCTCTCACTCTCGTTCTCGCTCTTTTCATTGACTCTTTTCTCTTCATTTGTTGAGTTTTCGTGTTTTTGTTTTTAAGAGTAGAAATTTGAGCATCTAACTTTAAAATTGATGCTTAAACTAGTAGAGAATTAGAATTAGAATTTGACAAAACTTTAGTTGGGGCGAATAAGTGAAGAAGAAAGAGGGGTTGATAGTTGCCCGTACAGTCTCCTAGATTGAAGAAATTATTTAAGGATTTAAGGATATTGTCACGATGTTGCGAGTAGAGTTTTATGTTTGATGTTTATCTAATATGGTATATCAGATAACATGAAATCTTAAGAGGCATTCAATCGGAAAAAAATGTGGATTTGATAAAAAAAATGGTATTTAATATTATAATTGGGAAGAAAACAACGTTACAAGGGAGTTTAAACCTAAGACATCAGGAACTAATCTGCTCTGATACCATGTTAAATCGTTGATTGACCCAAAAACTTAAACTAATAGGTAAAGAAAAATTTAATTACATCGTCTAACACATGTTAAGTTTTATATTTAGGAACAAATTGCATTATTAATTCTAATTCCAACACATATTCTCATAATCCAATTGAGAGCTCCAATTAGTTCTTACCAATAATAAACCTTGTTGGTTGTATGGCTTTATAGTTTTAAAATTTTTATCTATAAATGCAATGTTTTAACTTTCTTTTTTATTATTATTATCCTTTTTTTTTTTTTTTTCTTGTTTTGGTGATAGAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGTTTGTCTTCTTTTTTTCACTTATTGACATCAATAAATTTTGGTTGACAAATAATCTTTGAGTGTTGTTTGAATTGACTATTTATGTACTTTAAAAGCGGTTTTTCCTTTTTCATTTTGAAACATTTTTTTAAATATTTAGAAAGTCAATCCAAACATGTTTAAATTATCTAGGTATGTATATGAATTGCAACTTTTTTTTTATAAAAAAAAATAGTTTTGAGTATGTATAACCTTTATTTGGTTTACAAGTTTAGGATTGGTAAAATTTAAGGTGGGCAAGATAAAATTCAAAAGATGTAAGAGATGGATCTAAATTTTGTCATATCCAGTTCAAACTATTAGCAGATATAGTACAATACAAATAAATTTGAAAATATGACAAAATTTAGATCCAGCTCTTATAGTCTATCATTGATAGACCATATTATTAATAGGAGTATCACTAATTAGAGTATAATCTATCAGTGATAAATTTTGTTATATTTGCAATTCTTTAAAAATGTTGCTATATACTTAATTATTAGTTCTAAAAATGCTACCCATTGCAATTACCCTAATTTTCTAAAATCTCGTTTGACAATAAGCAACTTTTGATTTTTGAATTTTGGTCCTTTACTTTCCAAACGTCTATTCTAACTTTCATACTTTTAAAAAATTGTTATTTTAGCTTCATGATATTCCTTATTATCTCCTATCTTTTTATGATAATTTTAGCATGAAACTTTACCCAATAAATTTCTTGAAATGTACCCATTATAAATTTATATAAAGGGTTTCGATTTTTTTTTTTTTATTAAATTTGTGTTGAAATTTTACAAATAGAAACAAAAATTGTCACTTTTCTAAAATATACATGGACATAAGTAAACATTTTCTAATTCTACAAATACTAAAATAAAACAGAAATTAAAGTTATAGGCAACAAAGTAAACGTTTTGAAAGTATAATGACCAAAGTGAAATTAAACTAAAAATTAAATACAGGTACTAAAACAGTATTAAACATTTTATTTAATATATCAAAATTATAAAAAGAAGTCAAATGAAAAATTGAAGAAAAATGTTATATAATAATGGCTCTAGTTTCCCTCACCAAGAGGGAGTAAATTAATGGACCTTCCCAACCTTCTGTGATAATGGAGGAAAAGGACACTGACAAGTGCTTTATCACAAGAAACTATGTGATGTAATTGCCAAACATTAGGAAAGTTTTCGGTTAGGTTTCACACTTAAGAAAGATAAACTTGTTACAAATACATGTTTTAGTTTTTTTTTTTTTTAGTCCCATTTATTTTAATATTTTAATATTGTTACTAGATGTTAAAATTAGCTCATGGTAAATTTATTAGAACAAGATATATTTAGTGACTTGGTAAAAGTTTAGATAAGAAATTAAATCGCTTCTTGTAAAAAAAAAAAAAAAAAAAATTATATAAGTTAGGGAGATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACACAAAATAGTAAAATTTTTAGATAGAAGTCTATTAGATGCTGATAGAAGTCTATCAATGTCTATCAGTACTTTTTTTGCTATTTTCTGTAAATAATTTGATGTTTTTTCTATCTGGGAAAATTTTCTTATAAGTTATCTATAGAAATTTTTTAATTTTTTCTTCTCATTTAAACTTTAGTTTTGTAAATATAAAATTTGGGAGAAGAAGATGGAATTAAATAAACTCAAGGAAGTGGTTTTTTTTAATTAGAATTTTTAGGTGTTGTTTTAAACAATCAAGTCAAGTTTGAAAAGGAGAAAATGTAATTTTCAAAAACTTGTTTTTGTTAATAGAGTTTGACTAGGAGTTCAAGTGTTTTCCTTAAAAAAACTAAAACCAATAATTTAAAAATAAGAATAAAACAAATGGTTATTTTCAAATACAGAAAAATGAGTCAAACTATTTACAAATATAGAAAAATTTTGCTGTCTATCAGCGATAGACCGCGATAGAATTCTATGATCACTTGAGCGATAGATAGCGATAGATTTCTATCGCTGATAGACAGTAAAGTTTTTCTATATTCGTAAATAGTTTGATATTTTTTCAAACTCAAAAGAAAAAAAAAATCCTTATCCATGAGTCTCAAAAGGGCCCCAAAATGTGTTAATGTGTGCCAACTTCCAAGTTGGAAGGAACAACTAGCAAATTAAATTCTTCATTGTCATTGAAGTAGTTTGAACTACCATTGACACAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA ATGGGGTTTGGAGATGTAAGAACTGAAGGGATTCTGAGATTTTGTGCTATTATTGGGTTGGTTTTAACAGTTTTATTGCTGGGTTTTGATAACGAAACTACTCAAATCTTTCATGTTGACAAGAAAGCATCATTTAGAAGTTTGCGCGCTCTCGTAATGATTATGTATGTGAACTCAATGGGAGCTGGCTATAACATTCTTCAGCTCTGCAAATGTTGGCTTTCTGCTAAGTCAAAATTAGGAATCTCCAAATTAGGGGGTGACTTTGATATATACCTATTTTGGCTTTCTTTCTTTCTTGATCAGGCAGCTGCATACATCACATTTGCAGCAAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGAGTACACGACTTCCAGTGGATGAAGCTGTGCAATAGATTCCAAAGATTTTGCTACCAAGCTGGAGGAGCTTTTCTTTGTGGCTATGCAGCTTTCTTTATATTGCTTGCCATTTCCTTCATCTCTGCTTTCAATTTGTTTAGGCATTATTCACCGAACCACTTCCTTAGATTAAAATCCAACAACAAGTGA MGFGDVRTEGILRFCAIIGLVLTVLLLGFDNETTQIFHVDKKASFRSLRALVMIMYVNSMGAGYNILQLCKCWLSAKSKLGISKLGGDFDIYLFWLSFFLDQAAAYITFAANTAGMEAAFLAVTGVHDFQWMKLCNRFQRFCYQAGGAFLCGYAAFFILLAISFISAFNLFRHYSPNHFLRLKSNNK Homology
BLAST of HG10006258 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus]) HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83 Identity = 158/186 (84.95%), Postives = 169/186 (90.86%), Query Frame = 0
BLAST of HG10006258 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida]) HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82 Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of HG10006258 vs. NCBI nr
Match: XP_022153293.1 (CASP-like protein 2C1 [Momordica charantia]) HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77 Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of HG10006258 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 284.3 bits (726), Expect = 7.8e-73 Identity = 142/185 (76.76%), Postives = 154/185 (83.24%), Query Frame = 0
BLAST of HG10006258 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata]) HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72 Identity = 142/185 (76.76%), Postives = 153/185 (82.70%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2) HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43 Identity = 91/177 (51.41%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.8e-41 Identity = 87/177 (49.15%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39 Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37 Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.3e-33 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A0A0LK62 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83 Identity = 158/186 (84.95%), Postives = 169/186 (90.86%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1DH36 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77 Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1FCZ2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 6.4e-73 Identity = 142/185 (76.76%), Postives = 153/185 (82.70%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1HQ91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71 Identity = 139/185 (75.14%), Postives = 152/185 (82.16%), Query Frame = 0
BLAST of HG10006258 vs. ExPASy TrEMBL
Match: A0A6J1ET65 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436264 PE=3 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 6.2e-68 Identity = 136/186 (73.12%), Postives = 151/186 (81.18%), Query Frame = 0
BLAST of HG10006258 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 142.1 bits (357), Expect = 4.5e-34 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of HG10006258 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21 Identity = 60/167 (35.93%), Postives = 90/167 (53.89%), Query Frame = 0
BLAST of HG10006258 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 85.1 bits (209), Expect = 6.5e-17 Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 0
BLAST of HG10006258 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07 Identity = 41/169 (24.26%), Postives = 75/169 (44.38%), Query Frame = 0
BLAST of HG10006258 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05 Identity = 42/170 (24.71%), Postives = 74/170 (43.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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