HG10006214 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10006214
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr07: 15886936 .. 15887241 (+)
RNA-Seq ExpressionHG10006214
SyntenyHG10006214
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTACCTTTGTCTCTGTTCATTAGCAGATTCCCTAAAATCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCAAGTCCTCGCAATCGACACCTACATAATTCAGTAGACATATCACCAACAACCAAACAGAAAAAGAAAAAACGGAAACCAGATTATTTACAAAAATGTTCAAAACAAACCGGATCATTCGAGAACAGATCGAGCGAAGCCGGAAATCCAAATGTGATAAGCGTCTGGTTCAAATACTTGGCGCAATGGTCCAAGTTAGTGACATCCGCAAATGTATAG

mRNA sequence

ATGGCGTTACCTTTGTCTCTGTTCATTAGCAGATTCCCTAAAATCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCAAGTCCTCGCAATCGACACCTACATAATTCAGTAGACATATCACCAACAACCAAACAGAAAAAGAAAAAACGGAAACCAGATTATTTACAAAAATGTTCAAAACAAACCGGATCATTCGAGAACAGATCGAGCGAAGCCGGAAATCCAAATGTGATAAGCGTCTGGTTCAAATACTTGGCGCAATGGTCCAAGTTAGTGACATCCGCAAATGTATAG

Coding sequence (CDS)

ATGGCGTTACCTTTGTCTCTGTTCATTAGCAGATTCCCTAAAATCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCAAGTCCTCGCAATCGACACCTACATAATTCAGTAGACATATCACCAACAACCAAACAGAAAAAGAAAAAACGGAAACCAGATTATTTACAAAAATGTTCAAAACAAACCGGATCATTCGAGAACAGATCGAGCGAAGCCGGAAATCCAAATGTGATAAGCGTCTGGTTCAAATACTTGGCGCAATGGTCCAAGTTAGTGACATCCGCAAATGTATAG

Protein sequence

MALPLSLFISRFPKINVTLPLLKQEIYTIASPRNRHLHNSVDISPTTKQKKKKRKPDYLQKCSKQTGSFENRSSEAGNPNVISVWFKYLAQWSKLVTSANV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10006214.1HG10006214.1mRNA