HG10006174 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006174
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	Chr07: 15231083 .. 15237823 (-)
RNA-Seq Expression	HG10006174
Synteny	HG10006174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAACACAACTACAGAGAAGGGCTCCACTGATGCCAACGCCCTCAATTCCAATCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCCGGTGGCGCTGAATCCGACATCGATCCCTCTAACCAAGACTACTTATCGGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGCTGGCCCGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATTAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTGTTTCTTTAAACCTCAGCTCTTTCTGGTAGTTGTTCTTTTTGTAGTAGTAAAGGCTTTGTTACTTATGGTCACATCGGGACGACGAATTGAATCTCTATCTTTCTATTGGTTTATTTGTTATGTTTGGTTCCAGTTCCACCACGTGGTTTTGTTATGGGACTGTCTGGCTAGTTATTTGTTCAGCCTGACCATCTTTTTGTGTTCCTCGTTGGGGAATTAGACTGGAACTGGATGTAATGATTTCAAGTAAAAAAATTTCTCCTTTTTTGAACCCAAAGGCTTCTAGGGAAAAAAGGAAAAAACATTATTCTCCCATCTTTGGCTGGTTCCATCAGTTACGTGCTAGTTTGTCACGACATGTTATTTTTGACTTCTTTCACAGCAGCCGCTGAATCACTGTCTGATATTAGGTTAACTAGTTGTATAAATGGAACTTCTTGGGGATGAAAAGGAGCGTATGTTAAACCTTGTTCTGGTTGTTTGAAATTGAGGCTTGATCTATGATGGAGGAGGTGCTTCTGAATTCTTCCTTTAGGGAGAAGGGTAAATTGTTGCGGCATGCTAGTTTCTTTGCATTTAGCTTGATAGGGATAATAGAATCTGTATAGAGGTGGAGAGAGATTTGGGAGATGGCTAGGTTTAATGCCTTCTTGTGCGCCTCCCCCCACCACCACCAATAATTATGAGCTTAATCTTGTTCTAGTGGATTGGACTCCTTTTTGTGGTTAGGATCAAACTCCTTTTTTGTTGGAGTTTGTTTTTGTATGCGCTTATAAGTGTGGTTTCTGACCTAAAAAAAAAATTGAAACTTGATCGCCCTTTCTTGTTAATTTTATTTTGCACTATATATATATATATATATATATATATATATATATATATATATATATTATATAGGTTCCTTAACTTCTTTTCTTCCTCATTTCTGTTGAAATGTTAATTGTTATTTTCCACATTCTTAGTGTCTCTAAATAATCCACATGTTCTTTAATTTTTATCAACATTTTTTGAGTTCATGGCAAAATTTAGTGGCATGATAAATTAATAATTCATTGTACATTGGTTTGAAATGCATAAGTAAACTCTTATATTTTTAAAGAACATGACAGATTGATATCATTCTTCTAGTCACTTCACTAGGAGTAAAGACACTTATAAACCCGGTGGTATAAGCCTCTTATAACCCGAAGTAGGCGTAAGAAGGGTTCTTGTAATTTTTGTTAGGCTTAATTATTGTGTGTGTGTGTGTGTTTTTGTATATCTAGTCTAGGTCTTGTATTCGCTCCTCTTGTTGGGCTGTCTTTTTCTATGCCCTTCTATTCTTTCAATTTTCTCAATGAAACTCTGTTTTCCATTGGAAAAAAAAAATTAGGCAAAATATCACAGTGATCTGATTATTACCTTCCATAAGTCATGTATTTTTGACTTTTGTATAGGCTGTTTTTAACTTCATTTTGTTTGCTGACTACGCGCTTCCTGATTGTCTGTAAATTGTAGAAGGTGGTGGTTATGCACTTGGTTTATTTAGAAAACACACTTTGTACTTTGAGGAGTGCCCAAATAATTGAGATTAGTTTCAATGAAGTACTGTAGCATATCAAAAGAGGCATTACTTTTCCATTTAGGAGGCTGCTGCAATTACCTTTTAATTCTTTTGACGCTTCACTTTGATTTGCAAGAACACTTGGATGCATTTACAGACAATTGTTCAAACCTGTTCGTTCAGTTTTTAATGTTTTGATTTTACTTCAGGTGCTGATTTCAGGAAAGGAAGAGCTTGATGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCCGGATTATCCGAGAATGAAGATGAGGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTACTATCAGGAGGTATGCTTTCATTCTCTGTTATGCACTTGCCATGCTCTTTTTATTGATTGGTTTTGGGCCTAGCTGTATTATTGCCGAAGATCATGAAATCTTCCAAATAGCTAAATTGTAGAGCCATTAAAAAGGTTGTTATTGAGAGATTCAAATATTTGCACCCTCCAAAACTTCATTGCACGAGATGGATCATTCTAAAGAGTAAAAATGCCCCTAAAGAGCCAAGGGAATCAATAGAAGGCACCTTCATTATGAGAGGAGCAAATGCGTCTGATAAAAATTGGTCCACCATACTAAGCTTTGGTTTTTTCAAAAGAACAATATCCCGAGCAATATTTATTATTAACCATAGTGTTTTTGATAAGATACACCTTACCCTTTTTATATAGATGCACCTTAACTTTTTTCATTTAGTCCAATTTTGTATTAATCAGTTATTTGACCAGAGAGGTGATTTGGTTATAGGAAGTATTGTTTGTTTCTCTCCTTTAAGTTTCGGATCAAATGTTTGTAAGAAGTGGAAATATGGGAAGCCTCATTGCAAGACTGAAATCTCACAAGTTGTGCTGTGTTAGAGTTAGATTTTGATGGTTCAGTGTTTGGCCCCCTTCCATGTAAAGAGTCTCTTATTGTAGACAAATTAGATGTTCAACTTCAGAATAAGTACTCTTCTCAATAACTAGTCTGTGAAGAAAAGATCCGTGAGAATCACCAGTGTCAACGGGGATTACATTTTTACCTTTTACCATTGAGCTAAAGGTACCTTCCCTTCCCCCCCCCCCTCAAAAAACCTTTTCTTTAAAAGATATACCCTGATCTTATGGTCGCCTAGCTAACTTAATTGGAAGAGCTTACCTTTCTTCTTTCGAGGAGGTGAAGGGCTCTTTAGGTCAAACTCCCTTTATTCATCAGCCCATTGAAAAGCCTTGCAGAAAAGGCATCTCTCGGGCTATTTTGACATATTTGTATCGAAGGATTAAGTTGGCAATTAAAGCCAAGAAAAATTTTCCATTGGGTGGAGGATGGTCTCTCTCTCTCTCTCTTCAAATAAACCACTGGGTAGAGAGGAAACTGAAAAGAGAGCAAGGATGTAATGTACAATCTAAGAAACTGAACTACCTTAGACTCTGTCATCGGGTGTTCACCTCAATTGTACAATGTGCAATCTCCTCAATTGTACATTAAAATTATGAAAAGAAAATATGAACTACCTTAGACTTTGTCATCGGGTGTTCACCTCAATTGTCTGAGAGCAAGGATATAATGTACAATCTAAGAAACTGAAAACAAAACTGTAAAACCCAATCATCCTTTATCTACTTTGTAATTACTCTTTAGACACAATTTTGTATAGCTTGAGCCCTTTCCTACAAGGTGGTGTCCTTTTGTGGGCATGGTTTTTTGTATGCCCTTGCAATCTTTTATTTTCTCAATGAAAGTTGCTTTTATATATGGAAAAAAAAACACAAGTGAACAAAATTAAAACAGCTACAATAGTTCAAAGGTATGGTGATAAGATATGTACTTACCTCAATCCCTTGTATGCAGCCATGCAGCTTTGTTCTGGTGAGTTTTATCACCATTACTTTATCAACGTTGCTTCCATAACAAAATTCGATTCTAGAAATATGATTGTGTGGTGGAAATGGAATTGCAACTAAGGTTCATAAAGTTCTCGGTTTTTTTCCCCTTCTTTGTGTTAGACATAGAGGTTGTAGGGAGATGATCTAGGAGTTGCTTCTCCATCCACCTTTTCAAGGGACAGGGAAGTTTCTGTGGAAGGGGATTTGTGCTGTGTTGTGGATTTGTGGGGTGAGAGGAATAATAGGATCTTCAGAGGGGTTGAGAGGGGTTGAGAGTGACCCTAGTGATGTTTGGTTCTTTGTTTAATTGTTTCTCTTTGGGTATAGAGACTTTTTGTAATTATTCTTTAGGATTTGTTTTACTTTATTGGAGCCCTTCCTTTTGTGGGCTTGATGTTTTCTCGATGAAAATTCAGTTCTTTACCAAAAAAAAAAAAAAGAATCCGGGGTCGGGGCCTTTTTGGCATTAGGAAAATTATGTCTGAGACCTTTCATTCAACGAGACCTCATTGCTAACTTTATTATTATTGATGAATTATATGCAAAAATGGTAATGAGAATGTAAATCATCTCTTCATAATTGAAGGATGTAGTATAGTTTCATTCATGAGTTTTGAGTATTATCTGGTCATCTTAGAGAAGCACACTTATTCTGATTCACTAACATCTTTCTCTTGCTGATATATGATAAAAATTTCCTAAAGGCTAAAACTGAAAGTACATGGCAATAGCTGGATAATATAAGTATTATCTTTTACCTCAATTATATTGATGACGATTAACTTCAAGCCTTGAGTTCAGCCAGCAGGTCCAAGTAACTAATAATGTCCTGAGATAATATTGCATTTCCTCCTATAGTCATTCGTTTATGTGTACTCTCTGAATGTTCCCTTACTCATCTACATTTGATGTGCAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTGTAAGCTTTTTTCTTGTTAGGTCTATGACCAAACCTTTTCAAGGACTCCTAATGAATTGTTGCTCTCTCTCTTTTTTTTTTTTTTTTTTCTTTCTAGTTTAATACACCTGCCTCACAAGATCGCCAAACGGACGCCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCGTCAACAAAAAGAGAATCTCTATTTCTTGACCGAGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGTCAAGATCGAATACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTGGTATATGAAGCTCACTTATCCAGTTATTGGTAGAAGGAAATGGTCTATGTTGACTTAGTGAGGTAGCAAACTATCCCACCTACTCACCTCCATAATCAATAAGATCAATCCATCATTGCATGCCCATTATTGCAGTTACATGTCCTTCGTGTCTTGGAATTGAAACACTAGGTCCAAAATGTTTGGAATATTGCATACAAGTATTGTTTAGATTATACCATAATGCTGAATGGAGGCAGTGGGAACAGAGTAGTTACAGAGTTTTAGTTTGTTATTTCTGATCAAGTTACCCCTTTGTGGCTCCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACAATACAAGAGAGTAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATGACTTATAACTTCGTGGTTAAGAGATTGTTTGTGCTCCATAGAGTTGTGATGGGATACTCTGTTTCTCATGTCATGCAAAAGGCTACTTTTATTTCATTTTGTAATTCTCTCCTTGGCTAGAGCTTTATTGTATAGTTATTCTATCACAATGTTGTATTCCTTACAATATATTATGATCTAAATGTTTTAATTTTAACATAAATGAAATGAACACATAACATGAAAGAATATATTTATCAAAATTTTAATCTTTTTAGAGTGTAATTCCATGTTTTCATATGTCAAATTTTAAATTTAAAAACATTGAATCCGTAGATATGTTTTCATTATTTTCACGTAGATCACAAAATACAAATATAGGCCCTTAGTGTTGTGAACTATTTTGTTTGTAATGATCATTTGTAACATTAGGAGGGTTGGCCACATGGAAGAAGGGGCTTCGTTAGTGAGCCTAAAGGCTAGTAAAACATAGAAAATATGGCACAAGACTTTTTTTTTATTATTATTATTCAGGCTCAAATACCTATTGTAAGATAGAAAAGGATTGTGATTCTGATTCCCACATCAAGATCATCTCAACTTCAAATATGCATCTGTTGAGCAAAAATTAGGGCAATGTTTAGATATTAATGATTATTTTTGCCATGTAGGAAGCAGTTAGTGCCCCGAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTAGACACCGCAGGATTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

mRNA sequence

ATGGCCACCAACACAACTACAGAGAAGGGCTCCACTGATGCCAACGCCCTCAATTCCAATCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCCGGTGGCGCTGAATCCGACATCGATCCCTCTAACCAAGACTACTTATCGGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGCTGGCCCGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATTAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAGGAAGAGCTTGATGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCCGGATTATCCGAGAATGAAGATGAGGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTACTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGACGCCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCGTCAACAAAAAGAGAATCTCTATTTCTTGACCGAGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGTCAAGATCGAATACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACAATACAAGAGAGTAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTTAGTGCCCCGAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTAGACACCGCAGGATTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Coding sequence (CDS)

ATGGCCACCAACACAACTACAGAGAAGGGCTCCACTGATGCCAACGCCCTCAATTCCAATCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCCGGTGGCGCTGAATCCGACATCGATCCCTCTAACCAAGACTACTTATCGGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGCTGGCCCGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATTAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAGGAAGAGCTTGATGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCCGGATTATCCGAGAATGAAGATGAGGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTACTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGACGCCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCGTCAACAAAAAGAGAATCTCTATTTCTTGACCGAGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGTCAAGATCGAATACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACAATACAAGAGAGTAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTTAGTGCCCCGAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTAGACACCGCAGGATTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Protein sequence

MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

Homology

[Close]

BLAST of HG10006174 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 869.0 bits (2244), Expect = 1.9e-248
Identity = 459/473 (97.04%), Postives = 465/473 (98.31%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MAT TTTE GSTDANALNSNPQ+STL+SLAAAEPDSTEAGG ESDIDPSN+DYLSVPASD
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAA+EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQ D WADKSSLLTASQS+ISTEYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHI SSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLD  GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 421 TSSSYGRLDATGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 473

[Close]

BLAST of HG10006174 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 831.6 bits (2147), Expect = 3.3e-237
Identity = 444/473 (93.87%), Postives = 455/473 (96.19%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTT+ GSTDA A   NPQ+STL SLAAAE DSTE G  +SDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELD+PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLLTASQS+IS EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHISSSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of HG10006174 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 825.5 bits (2131), Expect = 2.4e-235
Identity = 441/473 (93.23%), Postives = 451/473 (95.35%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTTE GSTDA     NP +STL SLAAAEPDSTEAG  +SD DPSNQDY SVP SD
Sbjct: 1   MATNTTTENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLLTASQS+IS EY PSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE H DSHISSSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of HG10006174 vs. NCBI nr
Match: XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 817.4 bits (2110), Expect = 6.5e-233
Identity = 432/473 (91.33%), Postives = 446/473 (94.29%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATN TTE GSTDA+ALNS+PQ   LA  AAAEPDSTEAGGAESDIDPSNQDYLS PASD
Sbjct: 1   MATNATTENGSTDADALNSSPQ---LACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
              HE PNH GASDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  YVPHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE +APLSPAMDAV+R+FKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLL+ASQSVIS EYPPS+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LF DRETHLDSHISSSGISLYG DR+LP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQL ASGSSYT SSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of HG10006174 vs. NCBI nr
Match: XP_022938096.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata])

HSP 1 Score: 812.8 bits (2098), Expect = 1.6e-231
Identity = 432/473 (91.33%), Postives = 445/473 (94.08%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTTE GSTDA+ALNS+ Q   LA  AA EPDSTEA GAES IDPSNQDYLS PASD
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S  HE PNH GASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE +AP SPAMDAV+RVFKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTD+WADKSSLL+ASQSVISTEYPPS+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHISSSGISLYG DR+LP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQL ASGSSYT SSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of HG10006174 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 5.7e-123
Identity = 254/456 (55.70%), Postives = 327/456 (71.71%), Query Frame = 0


Query: 54  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKEE +A +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWAD-KSSLLTASQSV 293
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ +  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISTEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD +L    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEPVT-SSSYGRLDTAGL---------------------------RSSYSQ 473
           LIQE +   KEPV+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of HG10006174 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.4e-73
Identity = 178/424 (41.98%), Postives = 246/424 (58.02%), Query Frame = 0


Query: 71  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEELDAPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 190
           V++SGKEE ++ L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTPASQ-DRQTDAWADKSSLLTASQSV------------------IS 310
           VD S++P FE     P  Q D               + SV                    
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413

Query: 311 TEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQT 370
           + YPP   R+   ++++ H        GIS YG++  +    +  V  +   +  QVTQ 
Sbjct: 414 SYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVAQQVTQQ 473

Query: 371 MQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 430
           MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLI
Sbjct: 474 MQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLI 533

Query: 431 QEAVS-----APKEPVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSG 469
           Q  ++     AP +P T         A  +  Y+  A  GS Y ++  +    GGY +  
Sbjct: 534 QNFMAEAGAPAPAQPQT--------VAPEQQGYNPYATHGSVYAAAPTNPP--GGYATDY 575

[Close]

BLAST of HG10006174 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-19
Identity = 100/346 (28.90%), Postives = 160/346 (46.24%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELDAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 147 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 206
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 207 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 266
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 267 KSFNTP---------ASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHL 326
           K  +TP           Q +      D+ + L    ++  T +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 327 DSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 386
             H S    +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 387 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 416
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of HG10006174 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-19
Identity = 100/346 (28.90%), Postives = 160/346 (46.24%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELDAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 147 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 206
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 207 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 266
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 267 KSFNTP---------ASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHL 326
           K  +TP           Q +      D+ + L    ++  T +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 327 DSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 386
             H S    +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 387 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 416
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of HG10006174 vs. ExPASy Swiss-Prot
Match: P91277 (Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.5e-18
Identity = 100/355 (28.17%), Postives = 155/355 (43.66%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELDAPLSPA 146
           RL+V     G+IIG+ G+ IK++  E  A ++V D    TP+RV  ++  E+        
Sbjct: 53  RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTVTADEK-------- 112

Query: 147 MDAVIRVFKRVSGLSENEDE-AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 206
              V+ + K V  L   ED  ++   C +R+LV  + A  LIG+ GS IK ++E   A +
Sbjct: 113 --TVLNILKDV--LPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 172

Query: 207 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA 266
           ++ +G       G+ +R++   GE   VL  +E V+  L++  +  S  P +  +FN   
Sbjct: 173 KIFTG----CAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATP-YLPAFNYDP 232

Query: 267 SQ-------DRQTDAWADKSSLLTASQSVISTEYPPSTKRE------------------- 326
           S             A    ++   A Q     + PP   R                    
Sbjct: 233 SNISDYGGFPGNMPAGGPPNNRGPAPQR--GGQGPPGGPRSYGGAITQGGGQRSFEAGDF 292

Query: 327 SLFLDRETHLDSH-ISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAE 386
             F      +  + +S+ G          P     G G  GG  VT  T  + IP     
Sbjct: 293 QQFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVT--TAQVTIPSDLGG 352

Query: 387 DIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 414
            IIG GG  IA IR+ SGA +T+++S G P+ I + IKGT  Q+  AQ L+Q+ V
Sbjct: 353 TIIGRGGERIARIRQESGAQITLEQSNGQPERI-ITIKGTEQQIHSAQYLLQQCV 383

[Close]

BLAST of HG10006174 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 831.6 bits (2147), Expect = 1.6e-237
Identity = 444/473 (93.87%), Postives = 455/473 (96.19%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTT+ GSTDA A   NPQ+STL SLAAAE DSTE G  +SDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELD+PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLLTASQS+IS EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHISSSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of HG10006174 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 441/473 (93.23%), Postives = 451/473 (95.35%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTTE GSTDA     NP +STL SLAAAEPDSTEAG  +SD DPSNQDY SVP SD
Sbjct: 1   MATNTTTENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLLTASQS+IS EY PSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE H DSHISSSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of HG10006174 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 7.7e-232
Identity = 432/473 (91.33%), Postives = 445/473 (94.08%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTTE GSTDA+ALNS+ Q   LA  AA EPDSTEA GAES IDPSNQDYLS PASD
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S  HE PNH GASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE +AP SPAMDAV+RVFKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTD+WADKSSLL+ASQSVISTEYPPS+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHISSSGISLYG DR+LP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420
           IGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV
Sbjct: 361 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQL ASGSSYT SSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of HG10006174 vs. ExPASy TrEMBL
Match: A0A1S4E0X0 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC103492560 PE=4 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 1.7e-231
Identity = 437/477 (91.61%), Postives = 450/477 (94.34%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNTTT+ GSTDA A   NPQ+STL SLAAAE DSTE G  +SDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELD+PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLLTASQS+IS EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRS----GGPIVTQVTQTMQIPLSY 360
           LFLDRETHLDSHISSSGISLYGQDR+LPTIRSSGVGRS       ++  VTQTMQIPLSY
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSY 360

Query: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 420
           AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+AP
Sbjct: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 420

Query: 421 KEPVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           KEPVTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 KEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of HG10006174 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 2.2e-231
Identity = 433/474 (91.35%), Postives = 448/474 (94.51%), Query Frame = 0


Query: 1   MATNTTTEKGSTDANALNSNPQTSTLASLAAAEPDSTEAGGAESDIDPSNQDYLSVPASD 60
           MATNT T+ GSTDANALN NP++S LAS+AAAEPDS EAGGAESD+DPSNQDYLS PASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ +APLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLTASQSVISTEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ DAWADKSSLLTASQSVIS EYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+I SSGISLYGQDR+LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420

Query: 421 VTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 421 VTSSSYGRLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of HG10006174 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 442.6 bits (1137), Expect = 4.0e-124
Identity = 254/456 (55.70%), Postives = 327/456 (71.71%), Query Frame = 0


Query: 54  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKEE +A +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWAD-KSSLLTASQSV 293
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ +  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISTEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD +L    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEPVT-SSSYGRLDTAGL---------------------------RSSYSQ 473
           LIQE +   KEPV+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of HG10006174 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.8e-74
Identity = 178/424 (41.98%), Postives = 246/424 (58.02%), Query Frame = 0


Query: 71  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEELDAPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 190
           V++SGKEE ++ L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTPASQ-DRQTDAWADKSSLLTASQSV------------------IS 310
           VD S++P FE     P  Q D               + SV                    
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413

Query: 311 TEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRILPTIRSSGVGRSGGPIVTQVTQT 370
           + YPP   R+   ++++ H        GIS YG++  +    +  V  +   +  QVTQ 
Sbjct: 414 SYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVAQQVTQQ 473

Query: 371 MQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 430
           MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLI
Sbjct: 474 MQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLI 533

Query: 431 QEAVS-----APKEPVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSG 469
           Q  ++     AP +P T         A  +  Y+  A  GS Y ++  +    GGY +  
Sbjct: 534 QNFMAEAGAPAPAQPQT--------VAPEQQGYNPYATHGSVYAAAPTNPP--GGYATDY 575

[Close]

BLAST of HG10006174 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-23
Identity = 92/343 (26.82%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELDAP 142
           +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E L+  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 143 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 202
            S A D V+RV  R+  +      A  +    RLLV S     L+GK G LI  ++ +TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 203 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------L 262
           AS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 263 PLFEKSFNTPASQ--DRQTDAWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSH 322
           P F   +  P      RQ  A  D+               P   +      DR     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 323 ISSSGISLYGQDRILP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 382
               GI  +    + P       +R+  +G S  P++T     + IP +Y   + G   +
Sbjct: 515 TPQPGIDGHPGGMVPPDVNHGFALRNEPIG-SENPVMTSANVEIVIPQAYLGHVYGENCS 574

Query: 383 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 410
           N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Sbjct: 575 NLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

[Close]

BLAST of HG10006174 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 103.2 bits (256), Expect = 5.8e-22
Identity = 61/174 (35.06%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI-SGKEELDA 142
           D VFR + PV K+GS+IGR GD++K++  +TR++IR+ +   G  +RV+ I S  +E +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 ------PLSPAMDAVIRVFKRV---SGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 202
                  LSPA DA+ R+  RV      SE+  E +    + +LLV S Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQ 168

Query: 203 LIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 247
           ++++I+  TGA +R++    MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of HG10006174 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 103.2 bits (256), Expect = 5.8e-22
Identity = 61/174 (35.06%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI-SGKEELDA 142
           D VFR + PV K+GS+IGR GD++K++  +TR++IR+ +   G  +RV+ I S  +E +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 143 ------PLSPAMDAVIRVFKRV---SGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 202
                  LSPA DA+ R+  RV      SE+  E +    + +LLV S Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQ 168

Query: 203 LIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 247
           ++++I+  TGA +R++    MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

The following BLAST results are available for this feature:

BLAST of HG10006174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890982.1	1.9e-248	97.04	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
TYK03085.1	3.3e-237	93.87	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_004149510.2	2.4e-235	93.23	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
XP_023538336.1	6.5e-233	91.33	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo...	[more]
XP_022938096.1	1.6e-231	91.33	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata]	[more]

BLAST of HG10006174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	5.7e-123	55.70	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	5.4e-73	41.98	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
P57721	1.5e-19	28.90	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	1.5e-19	28.90	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]
P91277	6.5e-18	28.17	Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6...	[more]

BLAST of HG10006174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVI2	1.6e-237	93.87	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LMH4	1.2e-235	93.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A6J1FC72	7.7e-232	91.33	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]
A0A1S4E0X0	1.7e-231	91.61	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1K7W7	2.2e-231	91.35	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of HG10006174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	4.0e-124	55.70	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	3.8e-74	41.98	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	3.1e-23	26.82	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	5.8e-22	35.06	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	5.8e-22	35.06	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 344..414 e-value: 6.9E-11 score: 52.2 coord: 82..155 e-value: 3.3E-9 score: 46.6 coord: 170..245 e-value: 8.0E-9 score: 45.3
None	No IPR available	GENE3D	3.30.310.210		coord: 83..247 e-value: 1.6E-29 score: 104.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 72..459
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 72..459
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 171..240 score: 13.439081
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 345..409 score: 14.361462
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 83..150 score: 13.669676
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 85..154 e-value: 2.64713E-19 score: 79.8279
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 173..238 e-value: 4.58899E-16 score: 70.5831
None	No IPR available	CDD	cd00105	KH-I	coord: 347..410 e-value: 1.25465E-11 score: 57.9551
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 337..415 e-value: 3.9E-14 score: 54.1
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 341..414
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 77..138
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 168..251
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 347..411 e-value: 1.5E-11 score: 43.9 coord: 174..238 e-value: 3.2E-10 score: 39.7 coord: 86..138 e-value: 5.7E-11 score: 42.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006174.1	HG10006174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding