HG10006162 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTGCAAGGAGGAAAAGGAGCTGGGTCGGCGGCAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTTCAAGCTCTGGACGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGTTGAATCATTAG ATGTTTTGCAAGGAGGAAAAGGAGCTGGGTCGGCGGCAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTTCAAGCTCTGGACGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGTTGAATCATTAG ATGTTTTGCAAGGAGGAAAAGGAGCTGGGTCGGCGGCAGGCCACCGGCACGTGCCCGTCATGTGGCGGCAAAGTTCAAGCTCTGGACGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTGTAACGTGTGGTCGTCGTTTGGAGTTGAATCATTAG MFCKEEKELGRRQATGTCPSCGGKVQALDVERKWRLCFVPLCFKIKRKYYCVTCGRRLELNH Homology
BLAST of HG10006162 vs. NCBI nr
Match: XP_008451097.1 (PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 9.6e-28 Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of HG10006162 vs. NCBI nr
Match: XP_038891000.1 (uncharacterized protein LOC120080412 [Benincasa hispida]) HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27 Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of HG10006162 vs. NCBI nr
Match: XP_011648964.1 (uncharacterized protein LOC105434563 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26 Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of HG10006162 vs. NCBI nr
Match: XP_022929732.1 (uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 uncharacterized protein LOC111491984 [Cucurbita maxima]) HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23 Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of HG10006162 vs. NCBI nr
Match: XP_023547069.1 (uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.1 bits (292), Expect = 5.5e-23 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of HG10006162 vs. ExPASy TrEMBL
Match: A0A1S3BRU0 (uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.7e-28 Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of HG10006162 vs. ExPASy TrEMBL
Match: A0A6J1K383 (uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23 Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of HG10006162 vs. ExPASy TrEMBL
Match: A0A6J1ENJ0 (uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC111436231 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23 Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of HG10006162 vs. ExPASy TrEMBL
Match: A0A6J1D838 (uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018230 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of HG10006162 vs. ExPASy TrEMBL
Match: A0A067J9B5 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06884 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.0e-19 Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of HG10006162 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 4.9e-22 Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of HG10006162 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 2.5e-18 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of HG10006162 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 6.5e-14 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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