HG10006137 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006137
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	prefoldin subunit 1
Location	Chr07: 14267545 .. 14273544 (-)
RNA-Seq Expression	HG10006137
Synteny	HG10006137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGAGGCGAACAGAGCTGTGAGTATTTTTACTCTTTTAATCTTGTTTTTCCACTCACCGCTGCTATTTTTCCGATGCATTAGCTTTTGATTTACCTTCTCCGATCAGACTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTAATTTCCTTTCATTTATTCGACTTACTAATACTGGAAATTGTTTAGTTTAATCTTTTGTACTTGTAGGAATGAAATCTTTTAGTAATTCTTGTCCGGATTGATCTTACAGGTTTTGTGCTGATGATTAGAAGCTTATTCTTTTTTTCAGTATTTAGTTTGTAATGTAAATGAATCTTTCCTGGATCAGTTGATGAATTTACTCAGTGTTGCTTTCTTTTGTTTCTTGTACATTTATTCGGTGTTTACTCGTTTTCTTTTGAAAGTGCAAAAGGGATTACAATAACACCTTCTAATCTAGGTTTATAATGGAAGTGGTACAATTACAAAAGATTTTGTTCCCTACTCCAATTAGAGGTCGTGAATTGTACAAAATCATAAAAGTATTCTAAAGAATAAAATTTATTTGAAAATTTTATAGCATTTCTTTCCTTCCAAACAACCACAAAATGACCTTTGAAATGTTGCTCCATAGCACCTTAGCTTTACCTTTACATCTCCTCCATTTAAGGAATCCACCATCCACTTCTCTATAGTTGAGGCATGCGCCAATTCAAACCAAACAAGCTACCCAAATGATCTCACACACTTCTGCTAAAATTCTAGTTAAGAAGAAGGTGGTTAAGCGTCTCTTCATTCCTCTGGCACAAAATCCACATATTCGGGGAAATAGAAATGTAAGGATATCTCCTTTTGACCTTTTCCTTAGTGCATGTTTGGGAGTGGTTTTGCAATTGTTAAAATCACTTTTTTCACGTTCAAAATTACTCTGAAACATACCTTTAATCACGTAAAATTAGTTTAATATTCAATTTTATACTTTTAGATGCAATTTTCATATCATCAAAGTTAGTTTTAAATGATTAAAAATATATTTCATGGTGATTTTTAAAATGAAAAAAAATGATTTTAACTATTTTATAATCACTTTTAAACATGCCCCTAGTATTTACTATTTATACTTCTGCGAGCCAGGTCCACAAAAAGAATTTCACCTTCTTTGGTACTGTACCTTCCAAAATAAAGCCTTCTCTTCTTCTTCTTCTTCTTTTTAGAAGAGACAAATTTATTGATGAATGAAATAAAAGGACCTTACAGGCTCCCAACACTTGGGGTGAATTACAAGAAAACTCTCCAATAAGAGGTCATAGAAAGTACACCAACGAAATGCATGGAATAAAGTAAAATCCGGAAAGCTATTAAAGGTTGAGAAATTATCCTTGAAGATCCTTGCATTCCTCTCACACCAAAGGTACCAGAAGAAAACTTGATTTGATTTATATAGTCAACCAAAAGGTTTTTTTTCACACCATGGAAGGAATTACCTACAAAAATTGAAGCTAGAATACCAGATATGTCATCCAGGAAAACCACAAACCAACCAAAGGCATCAAGCATTGTTACCCAAAACTTGGAAGCAAAGAAACAATGGATGAAGAGATGACAAGGATGGTGTGAGTCAGAATAACACATCACATACCATGATTTAGAGAGGGTGAAATGAGGCGTTCTCCTTTGTAATTTATCTGCTGTACTAATTCTACTAAGACTGTGGTAACCAAACAGAGTTGTTCCAAATTACTGAATAAAGTTTGCTCAAAATCAAAATTGGGTAACAATGCTCAATGCTTTTGGACAATTCTTTTGTCTTTCCTAGGAAATCTTGATCCTCTAAAGTGTAGGGAAAAAAAAAATCGACTCACGTAATGGAGAAGGATCCAACAAACTGCAAATTAAAAAAATAAAAATAATAAAATATAAAAATCGCATGAGAATCCCTTCCACACATGAATGTTCCTTCTCCCAAGCCTAAAATTGAACTTCTCAAGCATAGACAAAAGAGAGACAACATCCATTGCTCCCCTATCGAACAAAGAGCGACAAAACTCAAACAAAAAGGAAAAACTGCTCCTCAACTTTATAAAAAGTCAAATGGCACATGATTTTTAAAGGAAGAAAAATGATAGAGACGAGGGAACATAGATCAGAGAAGTTTATCCCCCACACACGGATCTTCCCAAAGGCCAAAAGTACGTTTCCTTCCCCTCCCCCACCACACAACCGAACAAGTGAGAGAAAGACGGGAGCTCCTAAAAAATATCCTTCCATAAGTTCTAGTAAGTGCCCACTGCCTACTGCTTTTAACCCCACCCGACAACCACTCAAAAGGACGAGAATCAAATTAGCTAGCAATAATCTTGTGCTAGAGAGCATTGGGATCAAGAGGGAAATGGTGAAGCCATTTGGCTAACAAAGCTTTGTTATGAGTCCTTAAATTCCCAAATTCTAACCATCTAAGGTAATGGTATTCGTATTGCATTCTTTGCAGGACCTTGGTCATATGCTTTGGAGTTGTGATTTTGCTTATGTTGTGTGGACTTGTTTCTTTGATGAGTTTGGTTTTGATCTGGCTAGACATCATGACTGTAGAGAGATGATCGAGTTCCTTCTTCATCCTCCCTTTAAGGAGAAAGGAAAGTTTTCGTTGCAAGCGGGGGTGTGATATTTTGTGGGGGCTTTGGAGTGAGAAGAACAATTGAACTTTAGAAGGACGAAGAGCCGTCCTTACAATGTTTGGTCCTTTGCTAGGTTCCACGTTTTCTTGTGGGCTGCAATTATGGAGTTATGTATATATATATATAGTTTGTTTGGTATTATCTTTTATCTCTTTCAGCCCCTATCTGCAAAAATTTCTAAAGGTCTTTAATCTTTTCAACTTCCTTACAAACAGCCACCAAAATTCTGAAGACCAATAAGAAACAGGAGGGCATGCTCTAATGAGCAGAAGCCTTTTCAAACAGATTTTGGAGCAACAGCCAATTTTTAGCAAAGATCTTCTCTCCTTTACAGAAAAGCAGAAAGATGGTTGACTTGTTTGTTCATTTTTTCTTTTTTCATGTCAATTGTGTCTTATTGAACTGGAAAGAAAGAAAGAGCATATACAGTCGCAATGATGGTTTTGGTAATTAATGGGGCTAAACGAGTTTGGAAGCTAAAGATGAAGATAATTTACTGTGACTTCTTTAACTCCTCTTTTTGAGGAACTGTTTCAACTTAGGGGCTTTGGTTGATAACTCCTTTATTCATGCTAGAACATGTGCCGAGGTTGTCTAGACCAAATTTACTTGCTATGACCTCCATTTCTATAGTACCAAGAGGATTTTCTCGTGTTTTGTGGGTGGGAGGCCATTTACCCACACTACACATAAGAATCTTTTTCCCACCTGTGCTGCCATTCTTCGTGTGAACATGTGATTGTCCATATGAATTTATCGATGTGAATTCTTCTTAGTTTTTCAATATTTGTGCCTGTCCATTTTATCATCTCTATCCTCACAAGTTTCATTTTAGTTACTAAACTATCTGTTACACAATTTGTGTGATACATTGATTGATGTATAATTATGAAATTAAAGTTTTTAAACGAGCATATGTTGAGTCTATAGTTTAGTGGTCGAAATTGTAGCTTGAGTTGTTTTACAGTAAAATGTAATGAATGTAGATTTTGGATGGGTTTGGTTTGGCGTGAAGATAAGCGGGAGGAGATATTAATGGGGATGAAAACCTTATTTTTCATCATTGACTGCATAATGTTTATACAAAAATGACATTTTCACTATATGAAATCTCTAGTGATTTGGAATTAAGAATCCTTTGGATATGTGAACTCTTAATTCTCAAACATTAAAACCATCAATTAATCTGTTTTCAGCCTTAAGAATTGGTTGATTGGGTTAGACACGGATTACCTTATGAGAAAGCTCGTGAGATAATAATCAGTTCCTTGACCTAAGATTCAAACACTCCACACGATAGGATGATCAATCCTACTTAAATGTTCTTGGCATGCAACTCAACACTCGAATTGCAAAAATTCAAGTTTTCTTGGCTAAACTTGAAAGAAAAAGCACAAAGGCTAAATAAAACTCTATTCATTGTAATCTTCTCAAAACAACCAAATGACAAGGTTTTTGATAGCCTCCTAATAAAACCCTAATGCCACATCATAGATCATAACAAAATGACAAAAATACCCCTACTTATTGAAAAATAATAAAATTACCTCAGAATTATTAAATAAAATATAAATAATAATTTGATGTCACGGTTTAAACATAATATGGCATAGTGACTAAGGCAAGTCCTTGACATCTCAAGACTAAAATGCAGATGTAGTTTGCTATCTTTTGTGCATTACAAAATTAGTTCTTTGTCATTCTTCAACGTGCCACTTTATCTGAATAGAGAATTTTTGACTTTATTTGTTAAGGCTGGTTTCCCTTACTTTGCAGTTGCAGACTCAGATACGAAACAAGGAGGGAGAGAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGGTACTTATCAAAGCTCCATTTTTTAACTGGAAGGTTGTTTACCCTTAGCCTAAATCATGATTAGCTGCCAAAACGTGTAGTATTTTTTTAACCTTGTTAGATTGACTTCATTCATCACTGATTTCCTTCCATCATTCTTTGTGGTGCAGGGAGAACGTGAGTTATGCTACAATTAAGTGAATAACTTAAAGTTAGATTTTTTTTTATTATTTTTCTCATATTATACAGATGAAATCCTCTTATTGTGTCATCTTGTTCTGACCAGGTTTGTTTTAGAGTCAAAGTCAGTTTTAATGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTACAATTGCCTCGCTCCAGGTACATATTAGTAGTATTAGTTTCCTCTGCAGATACAAGAGATCTTCCTTTAAATTTTCCAATTTTGTATACCTGTCATTTCATTTTTACAATGAAGAAGCTTGTTTTCGTTTCCAAAAAAAAAAAGGTGTATACTTGTCATTGACGTTTTCTCTTTTTGAAGATTTAGTTACCACTAAATAGCATTTTCTTGCCCTTCTTAGTTGTATATTTCTTGTCCTCACTAATTTTGACCTCCGGTACATATTAGTAGTATTAGTTTCCTCTGGAGATACAAGGTCTTCCTTTGAATTTTCCAATTTTGTATATCGATCGTTTCATTATTTCAGTGAAGAGACTTGTTTCCATTTTTAAAAAAAATGTGGATACTTGTCATTGACATTTTCTCTTTTTAAGATTTAGTTACATTTGCCTAGACTAAATAGCATTTTCTTGCCCTTCTTAGTTGTATTTTTTTGTCTTCACTAATGCTAAACCACCCCCCCCCCCCCCCCTGCGGCGGGTATGTCTTCTAAGGATCTAGGCATTTCTTGGGATTTCCAACACTTATCTCGATTGAAGCCAATTCGAACGTTTTTCCTTCTGTCTTCTTTATGTGAACGAATTACACACTGTAGTATTAAGAATCAAGTTTCGCTGAAGAGTTGGATGCCAACAATATTATCTATATTCTTGGCATCTTACTGAAAGCAAACTTATTCCTCTGTTTTTATCCCTTCTTTCCCTTTATGTTAAATTACTTGTGTAACATTATGACTGGTGGAGGTGTCCTTACCAGGAGATTTGGAGTGCAGTGTGGTTTGAATGCTTCCCTTTGAACTTTTGTGATTTACACTATTTAGAAATATTCTTTTTCTTTTTTTTTATCCAAACAAAAAAAAATGATACTCTTATTTTATCTTCGACAAATGGCATTTGGCTTTTTCTTTTTTCTCCCTTCATGAAAGATGATTTTCTTCGACATTTGCAGAGCTCGAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAG

mRNA sequence

ATGGCGGACGAGGCGAACAGAGCTACTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGTTGCAGACTCAGATACGAAACAAGGAGGGAGAGAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGATGAAATCCTCTTATTGTGTCATCTTGTTCTGACCAGGTTTGTTTTAGAGTCAAAGTCAGTTTTAATGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTACAATTGCCTCGCTCCAGAGCTCGAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAG

Coding sequence (CDS)

ATGGCGGACGAGGCGAACAGAGCTACTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGTTGCAGACTCAGATACGAAACAAGGAGGGAGAGAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGATGAAATCCTCTTATTGTGTCATCTTGTTCTGACCAGGTTTGTTTTAGAGTCAAAGTCAGTTTTAATGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTACAATTGCCTCGCTCCAGAGCTCGAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAG

Protein sequence

MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA

Homology

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BLAST of HG10006137 vs. NCBI nr
Match: XP_004152848.1 (prefoldin subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 121/139 (87.05%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADE NRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLEKQMAEVENNLR
Sbjct: 61  IGR----------TFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

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BLAST of HG10006137 vs. NCBI nr
Match: XP_023546624.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 118/139 (84.89%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLMNEQEQK KDSEATI SL SSKEYLEKQ+AEVENNLR
Sbjct: 61  IGR----------TFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

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BLAST of HG10006137 vs. NCBI nr
Match: KAG7029871.1 (Prefoldin subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 117/139 (84.17%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTN   S
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNMKFS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
                + C L+LTRFVLE KSVLMNEQEQK KDSEA I SL SSKEYLEKQ+AEVENNLR
Sbjct: 61  ---YFVWCGLILTRFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMS+A
Sbjct: 121 ELLQQDPGIARQIMSMSLA 136

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BLAST of HG10006137 vs. NCBI nr
Match: XP_022149806.1 (prefoldin subunit 1 [Momordica charantia])

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-50
Identity = 117/139 (84.17%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLMNEQEQK KDSEA IASLQ+SKEYLEKQMAEVENNLR
Sbjct: 61  IGR----------TFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

[Close]

BLAST of HG10006137 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.0 bits (528), Expect = 5.3e-50
Identity = 117/139 (84.17%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQLS+DTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLM EQEQKFKDSEA I SLQSSKEYLEKQ AEVENNLR
Sbjct: 61  IGR----------AFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

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BLAST of HG10006137 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.0e-09
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILL 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +  +  
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRM-- 69

Query: 67  LCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELL 124
                   F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  --------FILQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of HG10006137 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILL 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +  +  
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRM-- 69

Query: 67  LCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELL 124
                   F+L+SK V+ N+  +K K ++  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  --------FILQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of HG10006137 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILL 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +  +  
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRM-- 69

Query: 67  LCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELL 124
                   F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  --------FILQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of HG10006137 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.0e-08
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILL 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +  +  
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRM-- 69

Query: 67  LCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELL 124
                   F+L+SK  + ++  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  --------FILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of HG10006137 vs. ExPASy Swiss-Prot
Match: Q5D016 (Prefoldin subunit 1 OS=Danio rerio OX=7955 GN=pfdn1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIDEILL 66
           +  F E+Q +M++   K+K    QI      KK A LT  E+  L E T  ++    +  
Sbjct: 10  KKAFAELQAKMVDTQQKVKLADLQIEQLSRVKKHANLTHGEITSLPESTRMFEGAGRM-- 69

Query: 67  LCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLRELL 124
                   F+L+SK  + N+  +K K ++  I  L+  K YLE+ + + E+N+RE+L
Sbjct: 70  --------FILQSKGEISNQLLEKQKTADDKIKELEQKKTYLERSVKDAEDNIREML 116

[Close]

BLAST of HG10006137 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-52
Identity = 121/139 (87.05%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADE NRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLEKQMAEVENNLR
Sbjct: 61  IGR----------TFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

[Close]

BLAST of HG10006137 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 117/139 (84.17%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLMNEQEQK KDSEA IASLQ+SKEYLEKQMAEVENNLR
Sbjct: 61  IGR----------TFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMSVA
Sbjct: 121 ELLQQDPGIARQIMSMSVA 129

[Close]

BLAST of HG10006137 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50
Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLMNEQEQK KDSEA I SL SSKEYLEKQ+AEVENNLR
Sbjct: 61  IGR----------TFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           ELLQQDPGIARQIMSMS+A
Sbjct: 121 ELLQQDPGIARQIMSMSLA 129

[Close]

BLAST of HG10006137 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.3e-49
Identity = 115/139 (82.73%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQLS+DTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE KSVLM EQEQKFKDSEA I SLQSSKEYLEKQ AEVENNL+
Sbjct: 61  IGR----------AFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLK 120

Query: 121 ELLQQDPGIARQIMSMSVA 140
           EL+QQDPGIARQIMSMSVA
Sbjct: 121 ELVQQDPGIARQIMSMSVA 129

[Close]

BLAST of HG10006137 vs. ExPASy TrEMBL
Match: A0A1S3BP94 (prefoldin subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492055 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49
Identity = 116/138 (84.06%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MA+EANR TFLEIQGRMIEITGKLKQLQTQIR KEGEKKRAFLTLEELKQLSEDTN YKS
Sbjct: 1   MANEANRDTFLEIQGRMIEITGKLKQLQTQIRGKEGEKKRAFLTLEELKQLSEDTNTYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLE+QMAEVENNLR
Sbjct: 61  IGR----------TFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLERQMAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSV 139
           ELLQ DPGIARQIMSMS+
Sbjct: 121 ELLQLDPGIARQIMSMSI 128

[Close]

BLAST of HG10006137 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 )

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-44
Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I            +FVLE K+VL  EQEQK KDSEA +ASLQ+SKEYLEKQ+AEVENNLR
Sbjct: 61  IG-----------KFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSV 139
           ELLQQ+PGIA+QIMSMS+
Sbjct: 121 ELLQQEPGIAQQIMSMSM 127

[Close]

BLAST of HG10006137 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 )

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-44
Identity = 97/138 (70.29%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKS 60
           MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IDEILLLCHLVLTRFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR 120
           I             FVLE K+VL  EQEQK KDSEA +ASLQ+SKEYLEKQ+AEVENNLR
Sbjct: 61  IGR----------TFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLR 120

Query: 121 ELLQQDPGIARQIMSMSV 139
           ELLQQ+PGIA+QIMSMS+
Sbjct: 121 ELLQQEPGIAQQIMSMSM 128

The following BLAST results are available for this feature:

BLAST of HG10006137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152848.1	3.3e-52	87.05	prefoldin subunit 1 isoform X1 [Cucumis sativus]	[more]
XP_023546624.1	1.4e-50	84.89	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7029871.1	1.8e-50	84.17	Prefoldin subunit 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022149806.1	2.4e-50	84.17	prefoldin subunit 1 [Momordica charantia]	[more]
KAG6586128.1	5.3e-50	84.17	Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10006137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZE2	8.0e-09	32.48	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1	[more]
Q9CWM4	1.0e-08	32.48	Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1	[more]
Q5RAM7	1.0e-08	32.48	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1	[more]
O60925	4.0e-08	31.62	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2	[more]
Q5D016	1.3e-06	29.91	Prefoldin subunit 1 OS=Danio rerio OX=7955 GN=pfdn1 PE=2 SV=1	[more]

BLAST of HG10006137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJF7	1.6e-52	87.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1	[more]
A0A6J1D9I1	1.1e-50	84.17	prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1	[more]
A0A6J1ENI7	3.3e-50	83.45	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1	[more]
A0A6J1FB94	1.3e-49	82.73	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1	[more]
A0A1S3BP94	1.7e-49	84.06	prefoldin subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492055 PE=3 SV=1	[more]

BLAST of HG10006137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07340.2	1.2e-44	70.29	PREFOLDIN 1	[more]
AT2G07340.1	2.1e-44	70.29	PREFOLDIN 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..125
None	No IPR available	COILS	Coil	Coil	coord: 17..51
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..133
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..133
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 10..124
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..125 e-value: 8.0E-13 score: 48.3
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 8..127 e-value: 1.5E-8 score: 36.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006137.1	HG10006137.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding