HG10006019 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006019
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	violaxanthin de-epoxidase, chloroplastic
Location	Chr07: 11628985 .. 11633203 (-)
RNA-Seq Expression	HG10006019
Synteny	HG10006019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATAGTTGTTATACTGGCGTGCACATTCATGTTCATACCATCATCCCAAGCTGTTGATGCACTAAAAACATGTACATGCTTACTGAAAGAATGCAGGTATTTACCTATGCTGGTTAGTAATTGATATGACAATTTAACTCCTCACTGTCCAAACACAATCAATGGGCATAGTTGTTATACTGGCGTGCACATTCATGTTCATACCATCATCCCAAGCTGTTGATGCACTAAAAACATGTACATGCTTACTGATTGTGGCGAGGCAGGCAAAAGATATGCTCATATGTGCCTGTAATACAACTTTGAGAAAGTTTCTATTCTTGGTAAAATACGATTTCTGCTTCTGCAAACATCAAAGATGTATTGCCTTTAAATTTCTTCCTTCAAATTGGGTACTAACTACCGTTGCTTGGTTAGCAATTTTGAGACAAATCCTTTAGTTCAATCCTGGGGAATCCTCTGAATTTTGAGCAATAACTTTTCTAGTTTACTTCTACACCTGAGCTAGACTCCAAAAAAAAAACCAGGTCATGGGTTCCAGTTGAATTACCTGATAAGGACAGTATATGAAACAAGGTAGTCGTCAAAGTTGTATAATAGAAGAAATATGCTCGATTAATCTGTTTCCATAAAACAGGGAAGGGGAGTAATGAGAAATAAAAAAACTAAAAAAAAAGTAAATGATATCACTCAGTTTTCTAGATAGCTCATGACTAATGGAAACACATTATGCTGCATAGGTACACCTATTCCAACAACTTTTCACCATTTCAACATCAATTGGGTTCAAAGCTGCACTCTGCACTATTTTCTTAACTAATTGTGGGTCAACAAGTAAGAGTAGACTGCTTTTTTCTTTTTCAAATATATTTGTAGCTCTCTCCAAATAGAAGTTGGCAAGAGAATAAAGTAAATGAATCAAATGATGCTTAAAGAGAATATGATAATCACTCAACACAAGTAAGCTTATTTGTTCACTTGGTTCCAATTCCAAAAACCATTGTATGCATGTGTGCTTGTGGGTGAAAGAAATATATTGGATTAAACTCTAAATTAGGTCTTTTTCATCATTTTCTTTATATAAATAAACCTCAAAACGATCATCAATGTGTAATCATACATCCCATGCAGGTTCACCTGGTACTTTCTTAACCACCATTATAAGTTCCTCACTTTGGAGATTCTTTAGCCATTCCTTTCTATGTCTATTGACTTGGGATTTTTTCTCCAAAATAGAAAATTATGAAAGTACTTCTATTTTAGGTTTAGGATAATATCAAGATATTGCCTAATTATGATGAAAAAGAACACAATTTTCCCCTCGGTTTGTTGGAGTAATTGTTGGTCTTTCCATTTCTTGGTTTTGTAGAGATAAATTTCTTATTGCTATAGCTTAGACCACTCTTTTCTCCTTGCATTTTCCACTTTTTAGTATGTTCTCAATTAGCTTCGAGCTTTCTTTAAATTTGCTCTCCTTAGGCTTTTGAAGTGTCCTTATTTCTCCTTTCTTAGGTTCACCGTTTTATTCTTAAGTAAGAGACTACGGTTTTTGGTTGCACTGAAATTTAATCCAAACATTTGTAATCATCCTCCAACTCATCGATTAGCATTCAAGAAGGGTTTTTAATTTCTTCCATTTATAACTTTCTTTTTGTTGGAGGTCTTTTCTCCCAAGTTGATTGATTAAATTTTACACTTGATTGTACTTTCTTTAGTTGCCCAGAAAATTGATAGGATATAAAATTCTTGGTAGGTGCCTACCATAGTTTAAACTCACTCTGTCTAAGTCCTTTACATTTTTTTTACATTTTTCACTAGCTCCACCGACCACTGCCAACCATGGTAGTTCATATTCAAATTCATCTGTACTCTTTAGGAGGGACAACATTACTGATAACAGTTGTATAAAGAGCCCTTTGTTCTTCTTACTAGAAACCTGATTTGTATTCAAATAACAAGATAACGCTTAGGGGCACAGGGAAGACAAATCCCCCTGCCATAAGAAACTAACAAAAAAACATTTCCAATTGTGGGGGAACACCAAAAAGTGATAATTACAAAAGAATTTATTGTCAATATGACACCACGAAGAAGCGTAAAGCTATACATCGCTACAAAAGAATATTACGAGAGATCTTATCTTCATAATGTCTGTTATTCCTTTCTAGCCAACAACCCCACAAAGCATAACCCCATATTAGTCCAGCGTTTTACTTAGGGTTCCATCCATTTAGAGCTTCCAGCAGTCACTCATACACACTTTTTGAAAGACAAACTGACAACCCAAAAATATAAAAATGCAGTTTCCAGCCTTGAAACTAACACTAGCAAGCATGCTGTCGGCAATGGTCCATGCATTGATCATTTTCTGGATGGTGATTTAGTAAAAATCTATTATATTGCCTCATTATTTTAGAATGTTTAAATCTCTTCCGTTTTCTTCTCATAACTCCTTCCCTCAACCAGAAAGAAAGTTGCATCACTATCAAATTTTTGAAAGCTGTGTATCTTGCTTCTAAAATGACTAGTTTCTTTTCCCATATGCCAGGCTTGAACTTGCCAAATGCATTTCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACTTGCAACAATCGACCCGATGAGACTGAATGCCAGGTTAGTTGTTCTCTTGGCTGGTACATATTGCTTTACATGATTAAAGCACATCAGGAATTAACTAATTGTTATTCTTTGCAGATTAAATGTGGTGATTTATTTGAAAACAGTGTGGTGGATGAATTTAATGAATGTGCAGTATCACGAAAGAAATGTGTGCCCATGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCCTCTGTTCTTGTTAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTCATCACTAGTGGCTTAAATCCCACTTTTGATACGTTTGATTGCCAGTTACATGAGTTTCATGTGGAGAATGGGAAACTTGTTGGGAATATAACATGGAGAATACGTACTCCTGATAGTGGTTTTTTCACTCGATCAACTGTGCAAAGATTTGTGCAAGATCCTGAGCATCCTGGCGTACTTTACAACCACAACAATGAATATCTTCACTATGAGGATGACTGGTATGCTTTTATTTCAACTGTATATGATCAAACTTCCTAGTACCTTATTTTGCTGTGGGAAAATTGATCCAAAGCATGAAGAAAGAAAAAAGAATTCCGACTTAGTTTGTCTTAGCATTAAATATATATATATATATATAAATTTAAATATATATAAAGGATAATATAATAAAATTTTCTAGCACCTTGAATCTATTCTATTAGTATTCACTATCATGCCTAGGATGCAGATTTAATGAAATTAAAAAAAAATGTACATAATGGCTTCCCTATACAATATTATGCCCCCTTATTTTCATTTAAATACAAAAATATGATTTAAAACCTTAGATGACTGCTGGTAGTTGTCACTAAGTTGATCACGAATGGAATGAGAAGAAACATGAATAAGAGTACGATTGGAGAATACGCTTAAGAATATGAAAAGTGTCTGCTCCTTTGCTTGAAGTGTGCATGTGGTGCAGCAGTCTCAACTAGGAATTGAAATTGTTTCTGGCCATTTCAAGTTGGCTTCCTTCGTTCTCATTATCTTGAACGTTAATTATGCAGGTATATTTTATCAAGCAAGGTGGAGAACAAACCAGACGATTACATTTTCGTTTACTATCGTGGTCGTAACGATGCTTGGGATGGCTATGGTGGAGCTGTTGTATACACAAGAAGTGCTGTACTGCCAGAAAGCATCGTTCCCGAGTTGGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAATTTATAAGAACAGACAATTCATGCGGTCCCGAACCACCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTTGAACAGATTGAACAAGAGGTGGAGAAGGAGGTTGAGCAGATTGAAAAAGAGGTGGAGAAGGAAGTGGAGAAAGTAGGAAAGACAGAGATGTCATTGATTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAACAGGATGAGGAATTTTTCCTTAGAGAGTTATCAAAAGAAGAGACTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAATTTGTTTGGAAGAGCACTTGCTCTTAGAAAACTAAGATAA

mRNA sequence

ATGGGCATAGTTGTTATACTGGCGTGCACATTCATGTTCATACCATCATCCCAAGCTGTTGATGCACTAAAAACATGTACATGCTTACTGAAAGAATGCAGGCTTGAACTTGCCAAATGCATTTCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACTTGCAACAATCGACCCGATGAGACTGAATGCCAGATTAAATGTGGTGATTTATTTGAAAACAGTGTGGTGGATGAATTTAATGAATGTGCAGTATCACGAAAGAAATGTGTGCCCATGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCCTCTGTTCTTGTTAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTCATCACTAGTGGCTTAAATCCCACTTTTGATACGTTTGATTGCCAGTTACATGAGTTTCATGTGGAGAATGGGAAACTTGTTGGGAATATAACATGGAGAATACGTACTCCTGATAGTGGTTTTTTCACTCGATCAACTGTGCAAAGATTTGTGCAAGATCCTGAGCATCCTGGCGTACTTTACAACCACAACAATGAATATCTTCACTATGAGGATGACTGGTATATTTTATCAAGCAAGGTGGAGAACAAACCAGACGATTACATTTTCGTTTACTATCGTGGTCGTAACGATGCTTGGGATGGCTATGGTGGAGCTGTTGTATACACAAGAAGTGCTGTACTGCCAGAAAGCATCGTTCCCGAGTTGGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAATTTATAAGAACAGACAATTCATGCGGTCCCGAACCACCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTTGAACAGATTGAACAAGAGGTGGAGAAGGAGGTTGAGCAGATTGAAAAAGAGGTGGAGAAGGAAGTGGAGAAAGTAGGAAAGACAGAGATGTCATTGATTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAACAGGATGAGGAATTTTTCCTTAGAGAGTTATCAAAAGAAGAGACTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAATTTGTTTGGAAGAGCACTTGCTCTTAGAAAACTAAGATAA

Coding sequence (CDS)

ATGGGCATAGTTGTTATACTGGCGTGCACATTCATGTTCATACCATCATCCCAAGCTGTTGATGCACTAAAAACATGTACATGCTTACTGAAAGAATGCAGGCTTGAACTTGCCAAATGCATTTCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACTTGCAACAATCGACCCGATGAGACTGAATGCCAGATTAAATGTGGTGATTTATTTGAAAACAGTGTGGTGGATGAATTTAATGAATGTGCAGTATCACGAAAGAAATGTGTGCCCATGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCCTCTGTTCTTGTTAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTCATCACTAGTGGCTTAAATCCCACTTTTGATACGTTTGATTGCCAGTTACATGAGTTTCATGTGGAGAATGGGAAACTTGTTGGGAATATAACATGGAGAATACGTACTCCTGATAGTGGTTTTTTCACTCGATCAACTGTGCAAAGATTTGTGCAAGATCCTGAGCATCCTGGCGTACTTTACAACCACAACAATGAATATCTTCACTATGAGGATGACTGGTATATTTTATCAAGCAAGGTGGAGAACAAACCAGACGATTACATTTTCGTTTACTATCGTGGTCGTAACGATGCTTGGGATGGCTATGGTGGAGCTGTTGTATACACAAGAAGTGCTGTACTGCCAGAAAGCATCGTTCCCGAGTTGGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAATTTATAAGAACAGACAATTCATGCGGTCCCGAACCACCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTTGAACAGATTGAACAAGAGGTGGAGAAGGAGGTTGAGCAGATTGAAAAAGAGGTGGAGAAGGAAGTGGAGAAAGTAGGAAAGACAGAGATGTCATTGATTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAACAGGATGAGGAATTTTTCCTTAGAGAGTTATCAAAAGAAGAGACTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAATTTGTTTGGAAGAGCACTTGCTCTTAGAAAACTAAGATAA

Protein sequence

MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEANEVENLFGRALALRKLR

Homology

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BLAST of HG10006019 vs. NCBI nr
Match: XP_038890493.1 (violaxanthin de-epoxidase, chloroplastic [Benincasa hispida])

HSP 1 Score: 742.7 bits (1916), Expect = 1.6e-210
Identity = 371/378 (98.15%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           MGIVVIL CTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 110 MGIVVILTCTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 169

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVK+FNISDFSG
Sbjct: 170 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKNFNISDFSG 229

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDP+ P
Sbjct: 230 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPQRP 289

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 290 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 349

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           +IVP+LERAA+SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE
Sbjct: 350 TIVPDLERAARSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 409

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME
Sbjct: 410 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 469

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 470 ANEVENLFGRALALRKLR 487

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BLAST of HG10006019 vs. NCBI nr
Match: KGN61328.1 (hypothetical protein Csa_006390 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 6.8e-209
Identity = 367/378 (97.09%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPS+QAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 112 VGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 171

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 172 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 231

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDPE P
Sbjct: 232 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERP 291

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 292 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 351

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 352 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 411

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE+IEKEVEKEVE+VGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME
Sbjct: 412 KEVEEIEKEVEKEVERVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 471

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 472 ANEVENLFGRALALRKLR 489

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BLAST of HG10006019 vs. NCBI nr
Match: NP_001292657.1 (violaxanthin de-epoxidase, chloroplastic [Cucumis sativus] >ADP69104.1 violaxanthin de-epoxidase [Cucumis sativus])

HSP 1 Score: 736.1 bits (1899), Expect = 1.5e-208
Identity = 366/378 (96.83%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPS+QAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 112 VGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 171

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 172 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 231

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDPE P
Sbjct: 232 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERP 291

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 292 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 351

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 352 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 411

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE+IEKEVEKEVE+VG+TEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME
Sbjct: 412 KEVEEIEKEVEKEVERVGRTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 471

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 472 ANEVENLFGRALALRKLR 489

[Close]

BLAST of HG10006019 vs. NCBI nr
Match: XP_008441814.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Cucumis melo])

HSP 1 Score: 725.7 bits (1872), Expect = 2.0e-205
Identity = 363/378 (96.03%), Postives = 370/378 (97.88%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 109 VGIVVILTCTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 168

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 169 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 228

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDP+ P
Sbjct: 229 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTIQRFVQDPDSP 288

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 289 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 348

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 349 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 408

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE    E+EKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEE DLLNELKME
Sbjct: 409 KEVE----EIEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEEADLLNELKME 468

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 469 ANEVENLFGRALALRKLR 482

[Close]

BLAST of HG10006019 vs. NCBI nr
Match: XP_022144551.1 (violaxanthin de-epoxidase, chloroplastic [Momordica charantia])

HSP 1 Score: 721.5 bits (1861), Expect = 3.9e-204
Identity = 358/376 (95.21%), Postives = 370/376 (98.40%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +VVIL CTFM IP SQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE
Sbjct: 114 VVVILTCTFMIIPPSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 173

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVG+FPVPDPSVL +SFNISDFSGKW
Sbjct: 174 TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGEFPVPDPSVLFQSFNISDFSGKW 233

Query: 123 FITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGV 182
           FITSGLNPTFDTFDCQLHEFHVE+GKLVGNITWRIRTPDSGFFTRSTVQRFVQDP HPGV
Sbjct: 234 FITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPAHPGV 293

Query: 183 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 242
           LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI
Sbjct: 294 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 353

Query: 243 VPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKE 302
           +PELE+AAKSVGRDFN+FIRTDNSCGPEPPLVERLEKTLESGEQTI+REVEQIEQEVEKE
Sbjct: 354 IPELEKAAKSVGRDFNRFIRTDNSCGPEPPLVERLEKTLESGEQTIIREVEQIEQEVEKE 413

Query: 303 VEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEAN 362
           V QIE+EVEKEVEKVGKTEM+LIEKLGEGLKELQQDEEFFLRELSKEE+DLLNELKMEA+
Sbjct: 414 VVQIEQEVEKEVEKVGKTEMTLIEKLGEGLKELQQDEEFFLRELSKEESDLLNELKMEAS 473

Query: 363 EVENLFGRALALRKLR 379
           EVENLFGRALALRKLR
Sbjct: 474 EVENLFGRALALRKLR 489

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BLAST of HG10006019 vs. ExPASy Swiss-Prot
Match: Q9SM43 (Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE=1 SV=2)

HSP 1 Score: 606.3 bits (1562), Expect = 2.4e-172
Identity = 287/376 (76.33%), Postives = 335/376 (89.10%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +  I+ACTF  + S+QAVDALKTCTCLLKECR+ELAKCI+NP CAANVACLQTCNNRPDE
Sbjct: 108 VTAIVACTFFVMSSAQAVDALKTCTCLLKECRIELAKCIANPSCAANVACLQTCNNRPDE 167

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLF N VVDEFNECAVSRKKCVP KSDVG+FPVPDPSVLVKSFN++DF+GKW
Sbjct: 168 TECQIKCGDLFANKVVDEFNECAVSRKKCVPQKSDVGEFPVPDPSVLVKSFNMADFNGKW 227

Query: 123 FITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGV 182
           FI+SGLNPTFD FDCQLHEFH+E+GKLVGN++WRI+TPD GFFTR+ VQ+F QDP  PG+
Sbjct: 228 FISSGLNPTFDAFDCQLHEFHLEDGKLVGNLSWRIKTPDGGFFTRTAVQKFAQDPSQPGM 287

Query: 183 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 242
           LYNH+N YLHY+DDWYILSSK+EN+PDDY+FVYYRGRNDAWDGYGGA +YTRSA +PE+I
Sbjct: 288 LYNHDNAYLHYQDDWYILSSKIENQPDDYVFVYYRGRNDAWDGYGGAFLYTRSATVPENI 347

Query: 243 VPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKE 302
           VPEL RAA+SVG+DFNKFIRTDN+CGPEPPLVERLEKT+E GE+TI+           KE
Sbjct: 348 VPELNRAAQSVGKDFNKFIRTDNTCGPEPPLVERLEKTVEEGERTII-----------KE 407

Query: 303 VEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEAN 362
           VEQ+E E+E ++EKVGKTEM+L ++L EG +ELQ+DEE+FL+EL+KEE +LL +LKMEA 
Sbjct: 408 VEQLEGEIEGDLEKVGKTEMTLFQRLLEGFQELQKDEEYFLKELNKEERELLEDLKMEAG 467

Query: 363 EVENLFGRALALRKLR 379
           EVE LFGRAL +RKLR
Sbjct: 468 EVEKLFGRALPIRKLR 472

[Close]

BLAST of HG10006019 vs. ExPASy Swiss-Prot
Match: Q39249 (Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 7.6e-171
Identity = 290/377 (76.92%), Postives = 335/377 (88.86%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +V +LAC F+ +PS+ AVDALKTC CLLK CR+ELAKCI+NP CAANVACLQTCNNRPDE
Sbjct: 97  LVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKCIANPACAANVACLQTCNNRPDE 156

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+FP PDPSVLV++FNISDF+GKW
Sbjct: 157 TECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGEFPAPDPSVLVQNFNISDFNGKW 216

Query: 123 FITSGLNPTFDTFDCQLHEFHVE-NGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPG 182
           +ITSGLNPTFD FDCQLHEFH E + KLVGNI+WRI+T DSGFFTRS VQ+FVQDP  PG
Sbjct: 217 YITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKTLDSGFFTRSAVQKFVQDPNQPG 276

Query: 183 VLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES 242
           VLYNH+NEYLHY+DDWYILSSK+ENKP+DYIFVYYRGRNDAWDGYGGAVVYTRS+VLP S
Sbjct: 277 VLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPNS 336

Query: 243 IVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEK 302
           I+PELE+AAKS+GRDF+ FIRTDN+CGPEP LVER+EKT+E GE+ IV           K
Sbjct: 337 IIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEKTVEEGERIIV-----------K 396

Query: 303 EVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEA 362
           EVE+IE+EVEKEVEKVG+TEM+L ++L EG  EL+QDEE F+RELSKEE + L+E+KMEA
Sbjct: 397 EVEEIEEEVEKEVEKVGRTEMTLFQRLAEGFNELKQDEENFVRELSKEEMEFLDEIKMEA 456

Query: 363 NEVENLFGRALALRKLR 379
           +EVE LFG+AL +RK+R
Sbjct: 457 SEVEKLFGKALPIRKVR 462

[Close]

BLAST of HG10006019 vs. ExPASy Swiss-Prot
Match: Q40251 (Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.0e-167
Identity = 283/376 (75.27%), Postives = 325/376 (86.44%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           + ++L CTF+ +P   AVDALKTC CLLKECR+ELAKCI+NP CAANVACLQTCNNRPDE
Sbjct: 109 LAIVLVCTFVIVPRVDAVDALKTCACLLKECRIELAKCIANPSCAANVACLQTCNNRPDE 168

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVD+FNECAVSRKKCVP KSDVG+FPVPD + +V++FN+ DFSGKW
Sbjct: 169 TECQIKCGDLFENSVVDQFNECAVSRKKCVPRKSDVGEFPVPDRNAVVQNFNMKDFSGKW 228

Query: 123 FITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGV 182
           +ITSGLNPTFD FDCQLHEFH+EN KLVGN+TWRI+T D GFFTRS VQ FVQDP+ PG 
Sbjct: 229 YITSGLNPTFDAFDCQLHEFHMENDKLVGNLTWRIKTLDGGFFTRSAVQTFVQDPDLPGA 288

Query: 183 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 242
           LYNH+NE+LHY+DDWYILSS++ENKPDDYIFVYYRGRNDAWDGYGG+V+YTRS  LPESI
Sbjct: 289 LYNHDNEFLHYQDDWYILSSQIENKPDDYIFVYYRGRNDAWDGYGGSVIYTRSPTLPESI 348

Query: 243 VPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKE 302
           +P L++AAKSVGRDFN FI TDNSCGPEPPLVERLEKT E GE+ ++           KE
Sbjct: 349 IPNLQKAAKSVGRDFNNFITTDNSCGPEPPLVERLEKTAEEGEKLLI-----------KE 408

Query: 303 VEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEAN 362
             +IE+EVEKEVEKV  TEM+L ++L EG KELQQDEE F+RELSKEE ++LNEL+MEA 
Sbjct: 409 AVEIEEEVEKEVEKVRDTEMTLFQRLLEGFKELQQDEENFVRELSKEEKEILNELQMEAT 468

Query: 363 EVENLFGRALALRKLR 379
           EVE LFGRAL +RKLR
Sbjct: 469 EVEKLFGRALPIRKLR 473

[Close]

BLAST of HG10006019 vs. ExPASy Swiss-Prot
Match: Q40593 (Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE=2 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 4.8e-165
Identity = 282/362 (77.90%), Postives = 315/362 (87.02%), Query Frame = 0


Query: 17  SQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENS 76
           + AVDALKTCTCLLKECRLELAKCISNP CAANVACLQTCNNRPDETECQIKCGDLFENS
Sbjct: 132 ADAVDALKTCTCLLKECRLELAKCISNPACAANVACLQTCNNRPDETECQIKCGDLFENS 191

Query: 77  VVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFD 136
           VVDEFNECAVSRKKCVP KSDVGDFPVPDPSVLV+ F++ DFSGKWFIT GLNPTFD FD
Sbjct: 192 VVDEFNECAVSRKKCVPRKSDVGDFPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFD 251

Query: 137 CQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGVLYNHNNEYLHYEDD 196
           CQLHEFH E  KLVGN++WRIRTPD GFFTRS VQ+FVQDP++PG+LYNH+NEYL Y+DD
Sbjct: 252 CQLHEFHTEENKLVGNLSWRIRTPDGGFFTRSAVQKFVQDPKYPGILYNHDNEYLLYQDD 311

Query: 197 WYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRD 256
           WYILSSKVEN P+DYIFVYY+GRNDAWDGYGG+V+YTRSAVLPESI+PEL+ AA+ VGRD
Sbjct: 312 WYILSSKVENSPEDYIFVYYKGRNDAWDGYGGSVLYTRSAVLPESIIPELQTAAQKVGRD 371

Query: 257 FNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQIEKEVEKEVEK 316
           FN FI+TDN+CGPEPPLVERLEK +E GE+TI++EVE               E+E+EVEK
Sbjct: 372 FNTFIKTDNTCGPEPPLVERLEKKVEEGERTIIKEVE---------------EIEEEVEK 431

Query: 317 VGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEANEVENLFGRALALRK 376
           V   E++L  KL EG KELQ+DEE FLRELSKEE D+L+ LKMEA EVE LFGRAL +RK
Sbjct: 432 VRDKEVTLFSKLFEGFKELQRDEENFLRELSKEEMDVLDGLKMEATEVEKLFGRALPIRK 478

Query: 377 LR 379
           LR
Sbjct: 492 LR 478

[Close]

BLAST of HG10006019 vs. ExPASy TrEMBL
Match: A0A0A0LHQ2 (VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.3e-209
Identity = 367/378 (97.09%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPS+QAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 112 VGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 171

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 172 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 231

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDPE P
Sbjct: 232 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERP 291

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 292 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 351

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 352 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 411

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE+IEKEVEKEVE+VGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME
Sbjct: 412 KEVEEIEKEVEKEVERVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 471

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 472 ANEVENLFGRALALRKLR 489

[Close]

BLAST of HG10006019 vs. ExPASy TrEMBL
Match: E5FPU5 (Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.3e-209
Identity = 366/378 (96.83%), Postives = 375/378 (99.21%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPS+QAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 112 VGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 171

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 172 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 231

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDPE P
Sbjct: 232 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERP 291

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 292 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 351

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 352 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 411

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE+IEKEVEKEVE+VG+TEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME
Sbjct: 412 KEVEEIEKEVEKEVERVGRTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 471

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 472 ANEVENLFGRALALRKLR 489

[Close]

BLAST of HG10006019 vs. ExPASy TrEMBL
Match: A0A1S3B4A9 (violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 9.9e-206
Identity = 363/378 (96.03%), Postives = 370/378 (97.88%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           +GIVVIL CTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP
Sbjct: 109 VGIVVILTCTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 168

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 169 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 228

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHV+NGKLVGNITWRIRTPDSGFFTRST+QRFVQDP+ P
Sbjct: 229 KWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTIQRFVQDPDSP 288

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 289 GILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 348

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           SIVPELERAA SVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVE
Sbjct: 349 SIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVE 408

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVE    E+EKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEE DLLNELKME
Sbjct: 409 KEVE----EIEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEEADLLNELKME 468

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVENLFGRALALRKLR
Sbjct: 469 ANEVENLFGRALALRKLR 482

[Close]

BLAST of HG10006019 vs. ExPASy TrEMBL
Match: A0A6J1CTR5 (violaxanthin de-epoxidase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014204 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 1.9e-204
Identity = 358/376 (95.21%), Postives = 370/376 (98.40%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +VVIL CTFM IP SQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE
Sbjct: 114 VVVILTCTFMIIPPSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 173

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVG+FPVPDPSVL +SFNISDFSGKW
Sbjct: 174 TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGEFPVPDPSVLFQSFNISDFSGKW 233

Query: 123 FITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPGV 182
           FITSGLNPTFDTFDCQLHEFHVE+GKLVGNITWRIRTPDSGFFTRSTVQRFVQDP HPGV
Sbjct: 234 FITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPAHPGV 293

Query: 183 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 242
           LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI
Sbjct: 294 LYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESI 353

Query: 243 VPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKE 302
           +PELE+AAKSVGRDFN+FIRTDNSCGPEPPLVERLEKTLESGEQTI+REVEQIEQEVEKE
Sbjct: 354 IPELEKAAKSVGRDFNRFIRTDNSCGPEPPLVERLEKTLESGEQTIIREVEQIEQEVEKE 413

Query: 303 VEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEAN 362
           V QIE+EVEKEVEKVGKTEM+LIEKLGEGLKELQQDEEFFLRELSKEE+DLLNELKMEA+
Sbjct: 414 VVQIEQEVEKEVEKVGKTEMTLIEKLGEGLKELQQDEEFFLRELSKEESDLLNELKMEAS 473

Query: 363 EVENLFGRALALRKLR 379
           EVENLFGRALALRKLR
Sbjct: 474 EVENLFGRALALRKLR 489

[Close]

BLAST of HG10006019 vs. ExPASy TrEMBL
Match: A0A6J1FAS6 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443955 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.7e-202
Identity = 354/378 (93.65%), Postives = 369/378 (97.62%), Query Frame = 0


Query: 1   MGIVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRP 60
           MG+V+ILACT MF+PSS+AVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCN+RP
Sbjct: 117 MGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRP 176

Query: 61  DETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSG 120
           DETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDVGDFPVPDPSVLVKSFNISDFSG
Sbjct: 177 DETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSG 236

Query: 121 KWFITSGLNPTFDTFDCQLHEFHVENGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHP 180
           KWFITSGLNPTFDTFDCQLHEFHVE+GKLVGNITWRIRTPDSGFFTRST QRFVQDPEHP
Sbjct: 237 KWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHP 296

Query: 181 GVLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 240
           G+LYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE
Sbjct: 297 GILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPE 356

Query: 241 SIVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 300
           S+VPELERAAKSVGRDFNKFI+TDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE
Sbjct: 357 SVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVE 416

Query: 301 KEVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKME 360
           KEVEQ+    EKEVE VGK EMSL+EKLGEGLKELQ+DEEFFLRELSKEE+DLLNELKME
Sbjct: 417 KEVEQL----EKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKME 476

Query: 361 ANEVENLFGRALALRKLR 379
           ANEVE+LFGRALALRKLR
Sbjct: 477 ANEVESLFGRALALRKLR 490

[Close]

BLAST of HG10006019 vs. TAIR 10
Match: AT1G08550.1 (non-photochemical quenching 1 )

HSP 1 Score: 601.3 bits (1549), Expect = 5.4e-172
Identity = 290/377 (76.92%), Postives = 335/377 (88.86%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +V +LAC F+ +PS+ AVDALKTC CLLK CR+ELAKCI+NP CAANVACLQTCNNRPDE
Sbjct: 97  LVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKCIANPACAANVACLQTCNNRPDE 156

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+FP PDPSVLV++FNISDF+GKW
Sbjct: 157 TECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGEFPAPDPSVLVQNFNISDFNGKW 216

Query: 123 FITSGLNPTFDTFDCQLHEFHVE-NGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPG 182
           +ITSGLNPTFD FDCQLHEFH E + KLVGNI+WRI+T DSGFFTRS VQ+FVQDP  PG
Sbjct: 217 YITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKTLDSGFFTRSAVQKFVQDPNQPG 276

Query: 183 VLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES 242
           VLYNH+NEYLHY+DDWYILSSK+ENKP+DYIFVYYRGRNDAWDGYGGAVVYTRS+VLP S
Sbjct: 277 VLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPNS 336

Query: 243 IVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEK 302
           I+PELE+AAKS+GRDF+ FIRTDN+CGPEP LVER+EKT+E GE+ IV           K
Sbjct: 337 IIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEKTVEEGERIIV-----------K 396

Query: 303 EVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEA 362
           EVE+IE+EVEKEVEKVG+TEM+L ++L EG  EL+QDEE F+RELSKEE + L+E+KMEA
Sbjct: 397 EVEEIEEEVEKEVEKVGRTEMTLFQRLAEGFNELKQDEENFVRELSKEEMEFLDEIKMEA 456

Query: 363 NEVENLFGRALALRKLR 379
           +EVE LFG+AL +RK+R
Sbjct: 457 SEVEKLFGKALPIRKVR 462

[Close]

BLAST of HG10006019 vs. TAIR 10
Match: AT1G08550.2 (non-photochemical quenching 1 )

HSP 1 Score: 601.3 bits (1549), Expect = 5.4e-172
Identity = 290/377 (76.92%), Postives = 335/377 (88.86%), Query Frame = 0


Query: 3   IVVILACTFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDE 62
           +V +LAC F+ +PS+ AVDALKTC CLLK CR+ELAKCI+NP CAANVACLQTCNNRPDE
Sbjct: 97  LVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKCIANPACAANVACLQTCNNRPDE 156

Query: 63  TECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKW 122
           TECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+FP PDPSVLV++FNISDF+GKW
Sbjct: 157 TECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGEFPAPDPSVLVQNFNISDFNGKW 216

Query: 123 FITSGLNPTFDTFDCQLHEFHVE-NGKLVGNITWRIRTPDSGFFTRSTVQRFVQDPEHPG 182
           +ITSGLNPTFD FDCQLHEFH E + KLVGNI+WRI+T DSGFFTRS VQ+FVQDP  PG
Sbjct: 217 YITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKTLDSGFFTRSAVQKFVQDPNQPG 276

Query: 183 VLYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES 242
           VLYNH+NEYLHY+DDWYILSSK+ENKP+DYIFVYYRGRNDAWDGYGGAVVYTRS+VLP S
Sbjct: 277 VLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPNS 336

Query: 243 IVPELERAAKSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEK 302
           I+PELE+AAKS+GRDF+ FIRTDN+CGPEP LVER+EKT+E GE+ IV           K
Sbjct: 337 IIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEKTVEEGERIIV-----------K 396

Query: 303 EVEQIEKEVEKEVEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEA 362
           EVE+IE+EVEKEVEKVG+TEM+L ++L EG  EL+QDEE F+RELSKEE + L+E+KMEA
Sbjct: 397 EVEEIEEEVEKEVEKVGRTEMTLFQRLAEGFNELKQDEENFVRELSKEEMEFLDEIKMEA 456

Query: 363 NEVENLFGRALALRKLR 379
           +EVE LFG+AL +RK+R
Sbjct: 457 SEVEKLFGKALPIRKVR 462

The following BLAST results are available for this feature:

BLAST of HG10006019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890493.1	1.6e-210	98.15	violaxanthin de-epoxidase, chloroplastic [Benincasa hispida]	[more]
KGN61328.1	6.8e-209	97.09	hypothetical protein Csa_006390 [Cucumis sativus]	[more]
NP_001292657.1	1.5e-208	96.83	violaxanthin de-epoxidase, chloroplastic [Cucumis sativus] >ADP69104.1 violaxant...	[more]
XP_008441814.1	2.0e-205	96.03	PREDICTED: violaxanthin de-epoxidase, chloroplastic [Cucumis melo]	[more]
XP_022144551.1	3.9e-204	95.21	violaxanthin de-epoxidase, chloroplastic [Momordica charantia]	[more]

BLAST of HG10006019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SM43	2.4e-172	76.33	Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE...	[more]
Q39249	7.6e-171	76.92	Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1...	[more]
Q40251	1.0e-167	75.27	Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 ...	[more]
Q40593	4.8e-165	77.90	Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE...	[more]

BLAST of HG10006019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHQ2	3.3e-209	97.09	VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=4 SV...	[more]
E5FPU5	7.3e-209	96.83	Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1	[more]
A0A1S3B4A9	9.9e-206	96.03	violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865...	[more]
A0A6J1CTR5	1.9e-204	95.21	violaxanthin de-epoxidase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FAS6	1.7e-202	93.65	violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of HG10006019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08550.1	5.4e-172	76.92	non-photochemical quenching 1	[more]
AT1G08550.2	5.4e-172	76.92	non-photochemical quenching 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 332..367
None	No IPR available	COILS	Coil	Coil	coord: 274..316
None	No IPR available	PANTHER	PTHR33970:SF1	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC	coord: 4..378
None	No IPR available	CDD	cd19420	lipocalin_VDE	coord: 97..272 e-value: 3.6865E-127 score: 361.084
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 96..278 e-value: 1.4E-78 score: 264.9
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 102..272
IPR010788	VDE lipocalin domain	PFAM	PF07137	VDE	coord: 25..265 e-value: 5.4E-104 score: 346.9
IPR044682	Violaxanthin de-epoxidase	PANTHER	PTHR33970	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED	coord: 4..378
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 114..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006019.1	HG10006019.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0010028	xanthophyll cycle
molecular_function	GO:0046422	violaxanthin de-epoxidase activity